Thu Jun 6 13:43:49 UTC 2024 I: starting to build openmm/unstable/amd64 on jenkins on '2024-06-06 13:43' Thu Jun 6 13:43:49 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_31/9504/console.log Thu Jun 6 13:43:49 UTC 2024 I: Downloading source for unstable/openmm=8.1.1+dfsg-1 --2024-06-06 13:43:49-- http://deb.debian.org/debian/pool/main/o/openmm/openmm_8.1.1%2bdfsg-1.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2508 (2.4K) [text/prs.lines.tag] Saving to: ‘openmm_8.1.1+dfsg-1.dsc’ 0K .. 100% 301M=0s 2024-06-06 13:43:49 (301 MB/s) - ‘openmm_8.1.1+dfsg-1.dsc’ saved [2508/2508] Thu Jun 6 13:43:49 UTC 2024 I: openmm_8.1.1+dfsg-1.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: openmm Binary: libopenmm-dev, libopenmm-plugins, libopenmm8.1, python3-openmm Architecture: any Version: 8.1.1+dfsg-1 Maintainer: Debichem Team Uploaders: Robert McGibbon , Andreas Tille , Andrius Merkys , Homepage: https://simtk.org/projects/openmm Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/debichem-team/openmm Vcs-Git: https://salsa.debian.org/debichem-team/openmm.git Testsuite: autopkgtest Testsuite-Triggers: python3-pytest Build-Depends: chrpath, cmake, cython3, debhelper-compat (= 13), dh-python, doxygen, dpkg-dev (>= 1.22.5), libsimde-dev, ocl-icd-opencl-dev, python3-all-dev:any, python3-numpy, python3-pytest , python3-pytest-xdist , python3-scipy , swig Package-List: libopenmm-dev deb libdevel optional arch=any libopenmm-plugins deb libs optional arch=any libopenmm8.1 deb libs optional arch=any python3-openmm deb python optional arch=any Checksums-Sha1: 8317194bc692a449e19552ac8d1c2136d72750fc 11551532 openmm_8.1.1+dfsg.orig.tar.xz e15eeabea45d56939c6b1bdd5a8150f12b562808 18592 openmm_8.1.1+dfsg-1.debian.tar.xz Checksums-Sha256: ccf10368d8db4ecc095d48eebb98421d82d6a45e5a316ae59c30bf0fadb82939 11551532 openmm_8.1.1+dfsg.orig.tar.xz b919142bd87c18a595878da740dbd6164f9455facf5b0a0844a6f90a873631b2 18592 openmm_8.1.1+dfsg-1.debian.tar.xz Files: 1ea5f6aa6ed579d27ddc0b779f19640a 11551532 openmm_8.1.1+dfsg.orig.tar.xz 60061c7489ca6c0868caf5a1473ecc04 18592 openmm_8.1.1+dfsg-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJGBAEBCgAwFiEEdyKS9veshfrgQdQe5fQ/nCc08ocFAmZG/2QSHG1lcmt5c0Bk ZWJpYW4ub3JnAAoJEOX0P5wnNPKH2hsP/R1OyvaNlCgetHikTOLYbteicHuuCn64 /QtNPTmNy6Xtj5V3702oN7IkmsOuSP6XPIWoaJpPbRhrgYYg3L1zxYE8pwK3iEes V5+KxlAjeQ1MBDcn0aL9O36Xquif1ebhtS92tcJ892EJoiIxvexwqKPKNuqVhFRa 2neSERZl8nVoGmhJhA0d3tvP4WXEtg1htW9P56LclKn/YK4gFEYFfSwiEzGOOCEG 0q/NKNhVk9Jh8h/O0trq8NIRWl2qatbJpa8R07GAIqIglLAtH660P2J2XLF7DjaY BRZjuKWIuoWPSRn3/RmkzD/BZPyyn5wgyIZeChJET/Y5KI03V9js8Ab/cJ1IEl37 w/Av7zl0gpRUV9fbvZFX5VJfDGjDDSo0KvK9nrb5AcG6OK2vI1DBAR7R4M4DVv2e LnqWSUK+1kMki3pP6i5UU5VSH5QEnKAuhP0hNldw/ovGa2tff+gVTE3hjdOXQZLu zA6WHbuaN+dCPihfIH3rUj1dFsUFArOzclrrRIw0HTV3Dt2vQ++z0n8LkjJ2ggaE iRkx/FzcflZymLL2Q629ItuCAlHekDLofzQWzhPpgUC8wWncVjYYcBx62XOMpVvE wMa071AB4RY5D5S5sEAgB915Hs6Q9G8EpSj975tOcGuRHZ6RDeIABe3KKZy45iwk f75WR7EU8A32 =ErRP -----END PGP SIGNATURE----- Thu Jun 6 13:43:49 UTC 2024 I: Checking whether the package is not for us Thu Jun 6 13:43:49 UTC 2024 I: Starting 1st build on remote node ionos11-amd64.debian.net. Thu Jun 6 13:43:49 UTC 2024 I: Preparing to do remote build '1' on ionos11-amd64.debian.net. Thu Jun 6 16:11:19 UTC 2024 I: Deleting $TMPDIR on ionos11-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Thu Jun 6 01:43:52 -12 2024 I: pbuilder-time-stamp: 1717681432 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [openmm_8.1.1+dfsg-1.dsc] I: copying [./openmm_8.1.1+dfsg.orig.tar.xz] I: copying [./openmm_8.1.1+dfsg-1.debian.tar.xz] I: Extracting source gpgv: Signature made Fri May 17 06:55:32 2024 gpgv: using RSA key 772292F6F7AC85FAE041D41EE5F43F9C2734F287 gpgv: issuer "merkys@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./openmm_8.1.1+dfsg-1.dsc: no acceptable signature found dpkg-source: info: extracting openmm in openmm-8.1.1+dfsg dpkg-source: info: unpacking openmm_8.1.1+dfsg.orig.tar.xz dpkg-source: info: unpacking openmm_8.1.1+dfsg-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying SIMDe.patch dpkg-source: info: applying skip-tests.patch dpkg-source: info: applying default_plugin_dir.diff dpkg-source: info: applying ignore-stochastic-test-failures.patch dpkg-source: info: applying reproducible-build.patch dpkg-source: info: applying disable-jit-on-armel-armhf.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/4096833/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='f1eb42bfc1754bc9a4d875eabfe842ed' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='4096833' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.voPpt5q6/pbuilderrc_J8RZ --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.voPpt5q6/b1 --logfile b1/build.log openmm_8.1.1+dfsg-1.dsc' SUDO_GID='111' SUDO_UID='106' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://46.16.76.132:3128' I: uname -a Linux ionos11-amd64 6.1.0-21-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.90-1 (2024-05-03) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Jun 5 07:42 /bin -> usr/bin I: user script /srv/workspace/pbuilder/4096833/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: chrpath, cmake, cython3, debhelper-compat (= 13), dh-python, doxygen, dpkg-dev (>= 1.22.5), libsimde-dev, ocl-icd-opencl-dev, python3-all-dev:any, python3-numpy, python3-pytest, python3-pytest-xdist, python3-scipy, swig dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19705 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on chrpath; however: Package chrpath is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on cython3; however: Package cython3 is not installed. pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on doxygen; however: Package doxygen is not installed. pbuilder-satisfydepends-dummy depends on libsimde-dev; however: Package libsimde-dev is not installed. pbuilder-satisfydepends-dummy depends on ocl-icd-opencl-dev; however: Package ocl-icd-opencl-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-all-dev:any. pbuilder-satisfydepends-dummy depends on python3-numpy; however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest-xdist; however: Package python3-pytest-xdist is not installed. pbuilder-satisfydepends-dummy depends on python3-scipy; however: Package python3-scipy is not installed. pbuilder-satisfydepends-dummy depends on swig; however: Package swig is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} chrpath{a} cmake{a} cmake-data{a} cython3{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} doxygen{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13t64{a} libblas3{a} libbrotli1{a} libbsd0{a} libclang-cpp16t64{a} libclang1-16t64{a} libcom-err2{a} libcurl4t64{a} libdebhelper-perl{a} libedit2{a} libelf1t64{a} libexpat1{a} libexpat1-dev{a} libfile-stripnondeterminism-perl{a} libfmt9{a} libgfortran5{a} libgssapi-krb5-2{a} libicu72{a} libjs-jquery{a} libjs-sphinxdoc{a} libjs-underscore{a} libjsoncpp25{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} liblbfgsb0{a} libldap-2.5-0{a} libllvm16t64{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libpipeline1{a} libproc2-0{a} libpsl5t64{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.11-dev{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libpython3.11t64{a} libpython3.12-dev{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.12t64{a} libreadline8t64{a} librhash0{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsimde-dev{a} libssh2-1t64{a} libtool{a} libuchardet0{a} libuv1t64{a} libxml2{a} libz3-4{a} m4{a} man-db{a} media-types{a} netbase{a} ocl-icd-libopencl1{a} ocl-icd-opencl-dev{a} opencl-c-headers{a} opencl-clhpp-headers{a} po-debconf{a} procps{a} python3{a} python3-all{a} python3-all-dev{a} python3-decorator{a} python3-dev{a} python3-distutils{a} python3-execnet{a} python3-iniconfig{a} python3-lib2to3{a} python3-minimal{a} python3-numpy{a} python3-packaging{a} python3-pkg-resources{a} python3-pluggy{a} python3-pytest{a} python3-pytest-xdist{a} python3-scipy{a} python3-setuptools{a} python3.11{a} python3.11-dev{a} python3.11-minimal{a} python3.12{a} python3.12-dev{a} python3.12-minimal{a} readline-common{a} sensible-utils{a} swig{a} tzdata{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl javascript-common krb5-locales libarchive-cpio-perl libgl-dev libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx psmisc publicsuffix python3-pil python3-pygments wget 0 packages upgraded, 119 newly installed, 0 to remove and 0 not upgraded. Need to get 154 MB of archives. After unpacking 722 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main amd64 libpython3.11-minimal amd64 3.11.9-1 [817 kB] Get: 2 http://deb.debian.org/debian unstable/main amd64 libexpat1 amd64 2.6.2-1 [103 kB] Get: 3 http://deb.debian.org/debian unstable/main amd64 python3.11-minimal amd64 3.11.9-1 [1879 kB] Get: 4 http://deb.debian.org/debian unstable/main amd64 python3-minimal amd64 3.11.8-1 [26.3 kB] Get: 5 http://deb.debian.org/debian unstable/main amd64 media-types all 10.1.0 [26.9 kB] Get: 6 http://deb.debian.org/debian unstable/main amd64 netbase all 6.4 [12.8 kB] Get: 7 http://deb.debian.org/debian unstable/main amd64 tzdata all 2024a-4 [255 kB] Get: 8 http://deb.debian.org/debian unstable/main amd64 readline-common all 8.2-4 [69.3 kB] Get: 9 http://deb.debian.org/debian unstable/main amd64 libreadline8t64 amd64 8.2-4 [167 kB] Get: 10 http://deb.debian.org/debian unstable/main amd64 libpython3.11-stdlib amd64 3.11.9-1 [1792 kB] Get: 11 http://deb.debian.org/debian unstable/main amd64 python3.11 amd64 3.11.9-1 [602 kB] Get: 12 http://deb.debian.org/debian unstable/main amd64 libpython3-stdlib amd64 3.11.8-1 [9332 B] Get: 13 http://deb.debian.org/debian unstable/main amd64 python3 amd64 3.11.8-1 [27.4 kB] Get: 14 http://deb.debian.org/debian unstable/main amd64 libpython3.12-minimal amd64 3.12.3-1 [809 kB] Get: 15 http://deb.debian.org/debian unstable/main amd64 python3.12-minimal amd64 3.12.3-1 [2139 kB] Get: 16 http://deb.debian.org/debian unstable/main amd64 libproc2-0 amd64 2:4.0.4-4 [64.6 kB] Get: 17 http://deb.debian.org/debian unstable/main amd64 procps amd64 2:4.0.4-4 [880 kB] Get: 18 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.22 [22.4 kB] Get: 19 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3 [314 kB] Get: 20 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3 [105 kB] Get: 21 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.45-3 [42.9 kB] Get: 22 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.21-14+b1 [161 kB] Get: 23 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b1 [68.8 kB] Get: 24 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-4 [1180 kB] Get: 25 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.40.1-8 [96.0 kB] Get: 26 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.7-2 [38.0 kB] Get: 27 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.12.1-2 [1411 kB] Get: 28 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.19-4 [287 kB] Get: 29 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.71-3 [332 kB] Get: 30 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 31 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 32 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.21-14 [496 kB] Get: 33 http://deb.debian.org/debian unstable/main amd64 chrpath amd64 0.16-2+b1 [17.1 kB] Get: 34 http://deb.debian.org/debian unstable/main amd64 libicu72 amd64 72.1-4+b1 [9395 kB] Get: 35 http://deb.debian.org/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg-3 [670 kB] Get: 36 http://deb.debian.org/debian unstable/main amd64 libarchive13t64 amd64 3.7.2-2.1 [346 kB] Get: 37 http://deb.debian.org/debian unstable/main amd64 libbrotli1 amd64 1.1.0-2+b3 [305 kB] Get: 38 http://deb.debian.org/debian unstable/main amd64 libkrb5support0 amd64 1.20.1-6+b1 [33.3 kB] Get: 39 http://deb.debian.org/debian unstable/main amd64 libcom-err2 amd64 1.47.1-1 [22.9 kB] Get: 40 http://deb.debian.org/debian unstable/main amd64 libk5crypto3 amd64 1.20.1-6+b1 [79.8 kB] Get: 41 http://deb.debian.org/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-3 [8952 B] Get: 42 http://deb.debian.org/debian unstable/main amd64 libkrb5-3 amd64 1.20.1-6+b1 [333 kB] Get: 43 http://deb.debian.org/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.20.1-6+b1 [135 kB] Get: 44 http://deb.debian.org/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-6 [19.5 kB] Get: 45 http://deb.debian.org/debian unstable/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-6 [56.9 kB] Get: 46 http://deb.debian.org/debian unstable/main amd64 libldap-2.5-0 amd64 2.5.17+dfsg-1 [186 kB] Get: 47 http://deb.debian.org/debian unstable/main amd64 libnghttp2-14 amd64 1.61.0-1+b1 [75.6 kB] Get: 48 http://deb.debian.org/debian unstable/main amd64 libpsl5t64 amd64 0.21.2-1.1 [56.8 kB] Get: 49 http://deb.debian.org/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b4 [58.5 kB] Get: 50 http://deb.debian.org/debian unstable/main amd64 libssh2-1t64 amd64 1.11.0-5 [215 kB] Get: 51 http://deb.debian.org/debian unstable/main amd64 libcurl4t64 amd64 8.8.0-1 [441 kB] Get: 52 http://deb.debian.org/debian unstable/main amd64 libjsoncpp25 amd64 1.9.5-6+b2 [81.9 kB] Get: 53 http://deb.debian.org/debian unstable/main amd64 librhash0 amd64 1.4.3-3+b1 [132 kB] Get: 54 http://deb.debian.org/debian unstable/main amd64 libuv1t64 amd64 1.48.0-4 [148 kB] Get: 55 http://deb.debian.org/debian unstable/main amd64 cmake-data all 3.29.4-1 [2167 kB] Get: 56 http://deb.debian.org/debian unstable/main amd64 cmake amd64 3.29.4-1 [10.7 MB] Get: 57 http://deb.debian.org/debian unstable/main amd64 cython3 amd64 3.0.10+dfsg-5 [3571 kB] Get: 58 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.15.3 [88.0 kB] Get: 59 http://deb.debian.org/debian unstable/main amd64 libtool all 2.4.7-7 [517 kB] Get: 60 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 61 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 62 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 63 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 64 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.191-1+b1 [189 kB] Get: 65 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 66 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.21-14+b1 [1301 kB] Get: 67 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 68 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 69 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.15.3 [901 kB] Get: 70 http://deb.debian.org/debian unstable/main amd64 python3-pkg-resources all 68.1.2-2 [241 kB] Get: 71 http://deb.debian.org/debian unstable/main amd64 python3-lib2to3 all 3.12.3-3.1 [77.7 kB] Get: 72 http://deb.debian.org/debian unstable/main amd64 python3-distutils all 3.12.3-3.1 [131 kB] Get: 73 http://deb.debian.org/debian unstable/main amd64 python3-setuptools all 68.1.2-2 [468 kB] Get: 74 http://deb.debian.org/debian unstable/main amd64 dh-python all 6.20240422 [107 kB] Get: 75 http://deb.debian.org/debian unstable/main amd64 libbsd0 amd64 0.12.2-1 [131 kB] Get: 76 http://deb.debian.org/debian unstable/main amd64 libedit2 amd64 3.1-20240517-1 [93.3 kB] Get: 77 http://deb.debian.org/debian unstable/main amd64 libz3-4 amd64 4.8.12-3.1+b2 [7346 kB] Get: 78 http://deb.debian.org/debian unstable/main amd64 libllvm16t64 amd64 1:16.0.6-27 [23.1 MB] Get: 79 http://deb.debian.org/debian unstable/main amd64 libclang-cpp16t64 amd64 1:16.0.6-27 [11.5 MB] Get: 80 http://deb.debian.org/debian unstable/main amd64 libclang1-16t64 amd64 1:16.0.6-27 [6581 kB] Get: 81 http://deb.debian.org/debian unstable/main amd64 libfmt9 amd64 9.1.0+ds1-2 [113 kB] Get: 82 http://deb.debian.org/debian unstable/main amd64 doxygen amd64 1.9.8+ds-2+b1 [4913 kB] Get: 83 http://deb.debian.org/debian unstable/main amd64 libblas3 amd64 3.12.0-3 [148 kB] Get: 84 http://deb.debian.org/debian unstable/main amd64 libexpat1-dev amd64 2.6.2-1 [155 kB] Get: 85 http://deb.debian.org/debian unstable/main amd64 libgfortran5 amd64 14.1.0-1 [836 kB] Get: 86 http://deb.debian.org/debian unstable/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 87 http://deb.debian.org/debian unstable/main amd64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 88 http://deb.debian.org/debian unstable/main amd64 libjs-sphinxdoc all 7.2.6-8 [150 kB] Get: 89 http://deb.debian.org/debian unstable/main amd64 liblapack3 amd64 3.12.0-3 [2407 kB] Get: 90 http://deb.debian.org/debian unstable/main amd64 liblbfgsb0 amd64 3.0+dfsg.4-1+b1 [29.1 kB] Get: 91 http://deb.debian.org/debian unstable/main amd64 libpython3.11t64 amd64 3.11.9-1 [1960 kB] Get: 92 http://deb.debian.org/debian unstable/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1 [919 kB] Get: 93 http://deb.debian.org/debian unstable/main amd64 libpython3.11-dev amd64 3.11.9-1 [4513 kB] Get: 94 http://deb.debian.org/debian unstable/main amd64 libpython3-dev amd64 3.11.8-1 [9560 B] Get: 95 http://deb.debian.org/debian unstable/main amd64 libpython3.12-stdlib amd64 3.12.3-1 [1951 kB] Get: 96 http://deb.debian.org/debian unstable/main amd64 libpython3.12t64 amd64 3.12.3-1 [2107 kB] Get: 97 http://deb.debian.org/debian unstable/main amd64 libpython3.12-dev amd64 3.12.3-1 [5069 kB] Get: 98 http://deb.debian.org/debian unstable/main amd64 libpython3-all-dev amd64 3.11.8-1 [1072 B] Get: 99 http://deb.debian.org/debian unstable/main amd64 libsimde-dev all 0.8.2-1 [465 kB] Get: 100 http://deb.debian.org/debian unstable/main amd64 ocl-icd-libopencl1 amd64 2.3.2-1+b1 [40.3 kB] Get: 101 http://deb.debian.org/debian unstable/main amd64 opencl-c-headers all 3.0~2024.05.08-1 [46.1 kB] Get: 102 http://deb.debian.org/debian unstable/main amd64 opencl-clhpp-headers all 3.0~2023.12.14-1 [49.5 kB] Get: 103 http://deb.debian.org/debian unstable/main amd64 ocl-icd-opencl-dev amd64 2.3.2-1+b1 [8676 B] Get: 104 http://deb.debian.org/debian unstable/main amd64 python3.12 amd64 3.12.3-1 [659 kB] Get: 105 http://deb.debian.org/debian unstable/main amd64 python3-all amd64 3.11.8-1 [1056 B] Get: 106 http://deb.debian.org/debian unstable/main amd64 python3.11-dev amd64 3.11.9-1 [501 kB] Get: 107 http://deb.debian.org/debian unstable/main amd64 python3-dev amd64 3.11.8-1 [26.1 kB] Get: 108 http://deb.debian.org/debian unstable/main amd64 python3.12-dev amd64 3.12.3-1 [499 kB] Get: 109 http://deb.debian.org/debian unstable/main amd64 python3-all-dev amd64 3.11.8-1 [1072 B] Get: 110 http://deb.debian.org/debian unstable/main amd64 python3-decorator all 5.1.1-5 [15.1 kB] Get: 111 http://deb.debian.org/debian unstable/main amd64 python3-execnet all 2.1.1-1 [40.2 kB] Get: 112 http://deb.debian.org/debian unstable/main amd64 python3-iniconfig all 1.1.1-2 [6396 B] Get: 113 http://deb.debian.org/debian unstable/main amd64 python3-numpy amd64 1:1.26.4+ds-10 [5465 kB] Get: 114 http://deb.debian.org/debian unstable/main amd64 python3-packaging all 24.0-1 [45.5 kB] Get: 115 http://deb.debian.org/debian unstable/main amd64 python3-pluggy all 1.5.0-1 [26.9 kB] Get: 116 http://deb.debian.org/debian unstable/main amd64 python3-pytest all 8.2.2-1 [248 kB] Get: 117 http://deb.debian.org/debian unstable/main amd64 python3-pytest-xdist all 3.6.1-1 [44.4 kB] Get: 118 http://deb.debian.org/debian unstable/main amd64 python3-scipy amd64 1.12.0-2 [21.0 MB] Get: 119 http://deb.debian.org/debian unstable/main amd64 swig amd64 4.2.1-1 [1437 kB] Fetched 154 MB in 4s (35.0 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.11-minimal:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19705 files and directories currently installed.) Preparing to unpack .../libpython3.11-minimal_3.11.9-1_amd64.deb ... Unpacking libpython3.11-minimal:amd64 (3.11.9-1) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../libexpat1_2.6.2-1_amd64.deb ... Unpacking libexpat1:amd64 (2.6.2-1) ... Selecting previously unselected package python3.11-minimal. Preparing to unpack .../python3.11-minimal_3.11.9-1_amd64.deb ... Unpacking python3.11-minimal (3.11.9-1) ... Setting up libpython3.11-minimal:amd64 (3.11.9-1) ... Setting up libexpat1:amd64 (2.6.2-1) ... Setting up python3.11-minimal (3.11.9-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20021 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.11.8-1_amd64.deb ... Unpacking python3-minimal (3.11.8-1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../2-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../3-tzdata_2024a-4_all.deb ... Unpacking tzdata (2024a-4) ... Selecting previously unselected package readline-common. Preparing to unpack .../4-readline-common_8.2-4_all.deb ... Unpacking readline-common (8.2-4) ... Selecting previously unselected package libreadline8t64:amd64. Preparing to unpack .../5-libreadline8t64_8.2-4_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.2-4) ... Selecting previously unselected package libpython3.11-stdlib:amd64. Preparing to unpack .../6-libpython3.11-stdlib_3.11.9-1_amd64.deb ... Unpacking libpython3.11-stdlib:amd64 (3.11.9-1) ... Selecting previously unselected package python3.11. Preparing to unpack .../7-python3.11_3.11.9-1_amd64.deb ... Unpacking python3.11 (3.11.9-1) ... Selecting previously unselected package libpython3-stdlib:amd64. Preparing to unpack .../8-libpython3-stdlib_3.11.8-1_amd64.deb ... Unpacking libpython3-stdlib:amd64 (3.11.8-1) ... Setting up python3-minimal (3.11.8-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21013 files and directories currently installed.) Preparing to unpack .../000-python3_3.11.8-1_amd64.deb ... Unpacking python3 (3.11.8-1) ... Selecting previously unselected package libpython3.12-minimal:amd64. Preparing to unpack .../001-libpython3.12-minimal_3.12.3-1_amd64.deb ... Unpacking libpython3.12-minimal:amd64 (3.12.3-1) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../002-python3.12-minimal_3.12.3-1_amd64.deb ... Unpacking python3.12-minimal (3.12.3-1) ... Selecting previously unselected package libproc2-0:amd64. Preparing to unpack .../003-libproc2-0_2%3a4.0.4-4_amd64.deb ... Unpacking libproc2-0:amd64 (2:4.0.4-4) ... Selecting previously unselected package procps. Preparing to unpack .../004-procps_2%3a4.0.4-4_amd64.deb ... Unpacking procps (2:4.0.4-4) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../005-sensible-utils_0.0.22_all.deb ... Unpacking sensible-utils (0.0.22) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../006-libmagic-mgc_1%3a5.45-3_amd64.deb ... Unpacking libmagic-mgc (1:5.45-3) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../007-libmagic1t64_1%3a5.45-3_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.45-3) ... Selecting previously unselected package file. Preparing to unpack .../008-file_1%3a5.45-3_amd64.deb ... Unpacking file (1:5.45-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../009-gettext-base_0.21-14+b1_amd64.deb ... Unpacking gettext-base (0.21-14+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../010-libuchardet0_0.0.8-1+b1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-1+b1) ... Selecting previously unselected package groff-base. Preparing to unpack .../011-groff-base_1.23.0-4_amd64.deb ... Unpacking groff-base (1.23.0-4) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../012-bsdextrautils_2.40.1-8_amd64.deb ... Unpacking bsdextrautils (2.40.1-8) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../013-libpipeline1_1.5.7-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.7-2) ... Selecting previously unselected package man-db. Preparing to unpack .../014-man-db_2.12.1-2_amd64.deb ... Unpacking man-db (2.12.1-2) ... Selecting previously unselected package m4. Preparing to unpack .../015-m4_1.4.19-4_amd64.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../016-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../017-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../018-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../019-autopoint_0.21-14_all.deb ... Unpacking autopoint (0.21-14) ... Selecting previously unselected package chrpath. Preparing to unpack .../020-chrpath_0.16-2+b1_amd64.deb ... Unpacking chrpath (0.16-2+b1) ... Selecting previously unselected package libicu72:amd64. Preparing to unpack .../021-libicu72_72.1-4+b1_amd64.deb ... Unpacking libicu72:amd64 (72.1-4+b1) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../022-libxml2_2.12.7+dfsg-3_amd64.deb ... Unpacking libxml2:amd64 (2.12.7+dfsg-3) ... Selecting previously unselected package libarchive13t64:amd64. Preparing to unpack .../023-libarchive13t64_3.7.2-2.1_amd64.deb ... Unpacking libarchive13t64:amd64 (3.7.2-2.1) ... Selecting previously unselected package libbrotli1:amd64. Preparing to unpack .../024-libbrotli1_1.1.0-2+b3_amd64.deb ... Unpacking libbrotli1:amd64 (1.1.0-2+b3) ... Selecting previously unselected package libkrb5support0:amd64. Preparing to unpack .../025-libkrb5support0_1.20.1-6+b1_amd64.deb ... Unpacking libkrb5support0:amd64 (1.20.1-6+b1) ... Selecting previously unselected package libcom-err2:amd64. Preparing to unpack .../026-libcom-err2_1.47.1-1_amd64.deb ... Unpacking libcom-err2:amd64 (1.47.1-1) ... Selecting previously unselected package libk5crypto3:amd64. Preparing to unpack .../027-libk5crypto3_1.20.1-6+b1_amd64.deb ... Unpacking libk5crypto3:amd64 (1.20.1-6+b1) ... Selecting previously unselected package libkeyutils1:amd64. Preparing to unpack .../028-libkeyutils1_1.6.3-3_amd64.deb ... Unpacking libkeyutils1:amd64 (1.6.3-3) ... Selecting previously unselected package libkrb5-3:amd64. Preparing to unpack .../029-libkrb5-3_1.20.1-6+b1_amd64.deb ... Unpacking libkrb5-3:amd64 (1.20.1-6+b1) ... Selecting previously unselected package libgssapi-krb5-2:amd64. Preparing to unpack .../030-libgssapi-krb5-2_1.20.1-6+b1_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.20.1-6+b1) ... Selecting previously unselected package libsasl2-modules-db:amd64. Preparing to unpack .../031-libsasl2-modules-db_2.1.28+dfsg1-6_amd64.deb ... Unpacking libsasl2-modules-db:amd64 (2.1.28+dfsg1-6) ... Selecting previously unselected package libsasl2-2:amd64. Preparing to unpack .../032-libsasl2-2_2.1.28+dfsg1-6_amd64.deb ... Unpacking libsasl2-2:amd64 (2.1.28+dfsg1-6) ... Selecting previously unselected package libldap-2.5-0:amd64. Preparing to unpack .../033-libldap-2.5-0_2.5.17+dfsg-1_amd64.deb ... Unpacking libldap-2.5-0:amd64 (2.5.17+dfsg-1) ... Selecting previously unselected package libnghttp2-14:amd64. Preparing to unpack .../034-libnghttp2-14_1.61.0-1+b1_amd64.deb ... Unpacking libnghttp2-14:amd64 (1.61.0-1+b1) ... Selecting previously unselected package libpsl5t64:amd64. Preparing to unpack .../035-libpsl5t64_0.21.2-1.1_amd64.deb ... Unpacking libpsl5t64:amd64 (0.21.2-1.1) ... Selecting previously unselected package librtmp1:amd64. Preparing to unpack .../036-librtmp1_2.4+20151223.gitfa8646d.1-2+b4_amd64.deb ... Unpacking librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b4) ... Selecting previously unselected package libssh2-1t64:amd64. Preparing to unpack .../037-libssh2-1t64_1.11.0-5_amd64.deb ... Unpacking libssh2-1t64:amd64 (1.11.0-5) ... Selecting previously unselected package libcurl4t64:amd64. Preparing to unpack .../038-libcurl4t64_8.8.0-1_amd64.deb ... Unpacking libcurl4t64:amd64 (8.8.0-1) ... Selecting previously unselected package libjsoncpp25:amd64. Preparing to unpack .../039-libjsoncpp25_1.9.5-6+b2_amd64.deb ... Unpacking libjsoncpp25:amd64 (1.9.5-6+b2) ... Selecting previously unselected package librhash0:amd64. Preparing to unpack .../040-librhash0_1.4.3-3+b1_amd64.deb ... Unpacking librhash0:amd64 (1.4.3-3+b1) ... Selecting previously unselected package libuv1t64:amd64. Preparing to unpack .../041-libuv1t64_1.48.0-4_amd64.deb ... Unpacking libuv1t64:amd64 (1.48.0-4) ... Selecting previously unselected package cmake-data. Preparing to unpack .../042-cmake-data_3.29.4-1_all.deb ... Unpacking cmake-data (3.29.4-1) ... Selecting previously unselected package cmake. Preparing to unpack .../043-cmake_3.29.4-1_amd64.deb ... Unpacking cmake (3.29.4-1) ... Selecting previously unselected package cython3. Preparing to unpack .../044-cython3_3.0.10+dfsg-5_amd64.deb ... Unpacking cython3 (3.0.10+dfsg-5) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../045-libdebhelper-perl_13.15.3_all.deb ... Unpacking libdebhelper-perl (13.15.3) ... Selecting previously unselected package libtool. Preparing to unpack .../046-libtool_2.4.7-7_all.deb ... Unpacking libtool (2.4.7-7) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../047-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../048-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../049-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../050-dh-strip-nondeterminism_1.14.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.14.0-1) ... Selecting previously unselected package libelf1t64:amd64. Preparing to unpack .../051-libelf1t64_0.191-1+b1_amd64.deb ... Unpacking libelf1t64:amd64 (0.191-1+b1) ... Selecting previously unselected package dwz. Preparing to unpack .../052-dwz_0.15-1+b1_amd64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package gettext. Preparing to unpack .../053-gettext_0.21-14+b1_amd64.deb ... Unpacking gettext (0.21-14+b1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../054-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... 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Setting up media-types (10.1.0) ... Setting up libpipeline1:amd64 (1.5.7-2) ... Setting up libsimde-dev (0.8.2-1) ... Setting up libkeyutils1:amd64 (1.6.3-3) ... Setting up swig (4.2.1-1) ... Setting up libicu72:amd64 (72.1-4+b1) ... Setting up bsdextrautils (2.40.1-8) ... Setting up libmagic-mgc (1:5.45-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.15.3) ... Setting up libbrotli1:amd64 (1.1.0-2+b3) ... Setting up libuv1t64:amd64 (1.48.0-4) ... Setting up libmagic1t64:amd64 (1:5.45-3) ... Setting up libpython3.12-minimal:amd64 (3.12.3-1) ... Setting up libpsl5t64:amd64 (0.21.2-1.1) ... Setting up libnghttp2-14:amd64 (1.61.0-1+b1) ... Setting up gettext-base (0.21-14+b1) ... Setting up m4 (1.4.19-4) ... Setting up libcom-err2:amd64 (1.47.1-1) ... Setting up file (1:5.45-3) ... Setting up libelf1t64:amd64 (0.191-1+b1) ... Setting up libkrb5support0:amd64 (1.20.1-6+b1) ... Setting up libsasl2-modules-db:amd64 (2.1.28+dfsg1-6) ... Setting up tzdata (2024a-4) ... Current default time zone: 'Etc/UTC' Local time is now: Thu Jun 6 13:46:25 UTC 2024. Universal Time is now: Thu Jun 6 13:46:25 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20220109.1) ... Setting up libz3-4:amd64 (4.8.12-3.1+b2) ... Setting up libblas3:amd64 (3.12.0-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libexpat1-dev:amd64 (2.6.2-1) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b4) ... Setting up libproc2-0:amd64 (2:4.0.4-4) ... Setting up autopoint (0.21-14) ... Setting up libjsoncpp25:amd64 (1.9.5-6+b2) ... Setting up libk5crypto3:amd64 (1.20.1-6+b1) ... Setting up opencl-c-headers (3.0~2024.05.08-1) ... Setting up libsasl2-2:amd64 (2.1.28+dfsg1-6) ... Setting up libgfortran5:amd64 (14.1.0-1) ... Setting up autoconf (2.71-3) ... Setting up libfmt9:amd64 (9.1.0+ds1-2) ... Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.22) ... Setting up ocl-icd-libopencl1:amd64 (2.3.2-1+b1) ... Setting up librhash0:amd64 (1.4.3-3+b1) ... Setting up libuchardet0:amd64 (0.0.8-1+b1) ... Setting up procps (2:4.0.4-4) ... Setting up netbase (6.4) ... Setting up cmake-data (3.29.4-1) ... Setting up libkrb5-3:amd64 (1.20.1-6+b1) ... Setting up libssh2-1t64:amd64 (1.11.0-5) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up libbsd0:amd64 (0.12.2-1) ... Setting up readline-common (8.2-4) ... Setting up libxml2:amd64 (2.12.7+dfsg-3) ... Setting up chrpath (0.16-2+b1) ... Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up python3.12-minimal (3.12.3-1) ... Setting up liblapack3:amd64 (3.12.0-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up gettext (0.21-14+b1) ... Setting up libtool (2.4.7-7) ... Setting up libedit2:amd64 (3.1-20240517-1) ... Setting up libldap-2.5-0:amd64 (2.5.17+dfsg-1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libllvm16t64:amd64 (1:16.0.6-27) ... Setting up dh-autoreconf (20) ... Setting up opencl-clhpp-headers (3.0~2023.12.14-1) ... Setting up libgssapi-krb5-2:amd64 (1.20.1-6+b1) ... Setting up libjs-sphinxdoc (7.2.6-8) ... Setting up ocl-icd-opencl-dev:amd64 (2.3.2-1+b1) ... Setting up libreadline8t64:amd64 (8.2-4) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-4) ... Setting up libarchive13t64:amd64 (3.7.2-2.1) ... Setting up liblbfgsb0:amd64 (3.0+dfsg.4-1+b1) ... Setting up libpython3.12-stdlib:amd64 (3.12.3-1) ... Setting up libcurl4t64:amd64 (8.8.0-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpython3.11-stdlib:amd64 (3.11.9-1) ... Setting up python3.12 (3.12.3-1) ... Setting up libpython3.11t64:amd64 (3.11.9-1) ... Setting up libclang1-16t64 (1:16.0.6-27) ... Setting up man-db (2.12.1-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libclang-cpp16t64 (1:16.0.6-27) ... Setting up libpython3.12t64:amd64 (3.12.3-1) ... Setting up doxygen (1.9.8+ds-2+b1) ... Setting up libpython3.11-dev:amd64 (3.11.9-1) ... Setting up cmake (3.29.4-1) ... Setting up libpython3-stdlib:amd64 (3.11.8-1) ... Setting up python3.11 (3.11.9-1) ... Setting up libpython3-dev:amd64 (3.11.8-1) ... Setting up python3.11-dev (3.11.9-1) ... Setting up debhelper (13.15.3) ... Setting up python3 (3.11.8-1) ... Setting up libpython3.12-dev:amd64 (3.12.3-1) ... Setting up python3-decorator (5.1.1-5) ... Setting up python3-packaging (24.0-1) ... Setting up libpython3-all-dev:amd64 (3.11.8-1) ... Setting up python3.12-dev (3.12.3-1) ... Setting up cython3 (3.0.10+dfsg-5) ... Setting up python3-pluggy (1.5.0-1) ... Setting up python3-execnet (2.1.1-1) ... Setting up python3-lib2to3 (3.12.3-3.1) ... Setting up python3-pkg-resources (68.1.2-2) ... Setting up python3-distutils (3.12.3-3.1) ... python3.12: can't get files for byte-compilation Setting up python3-iniconfig (1.1.1-2) ... Setting up python3-setuptools (68.1.2-2) ... Setting up python3-pytest (8.2.2-1) ... Setting up python3-all (3.11.8-1) ... Setting up python3-dev (3.11.8-1) ... Setting up python3-numpy (1:1.26.4+ds-10) ... Setting up dh-python (6.20240422) ... Setting up python3-all-dev (3.11.8-1) ... Setting up python3-scipy (1.12.0-2) ... Setting up python3-pytest-xdist (3.6.1-1) ... Processing triggers for libc-bin (2.38-12) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/openmm-8.1.1+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../openmm_8.1.1+dfsg-1_source.changes dpkg-buildpackage: info: source package openmm dpkg-buildpackage: info: source version 8.1.1+dfsg-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andrius Merkys dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --buildsystem cmake --with numpy3,python3 dh_auto_clean -O--buildsystem=cmake debian/rules execute_after_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg' rm -rf .pybuild make[1]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg' dh_autoreconf_clean -O--buildsystem=cmake dh_clean -O--buildsystem=cmake debian/rules binary dh binary --buildsystem cmake --with numpy3,python3 dh_update_autotools_config -O--buildsystem=cmake dh_autoreconf -O--buildsystem=cmake debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg' dh_auto_configure -- -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_C_FLAGS_RELEASE="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP" -DCMAKE_CXX_FLAGS_RELEASE="-g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP" -DCMAKE_SHARED_LINKER_FLAGS_RELEASE="-Wl,-z,relro -Wl,--as-needed" -DCMAKE_BUILD_RPATH_USE_ORIGIN=ON -DCMAKE_BUILD_TYPE=Release -DOPENMM_BUILD_SERIALIZATION_SUPPORT=ON -DOPENMM_BUILD_C_AND_FORTRAN_WRAPPERS=OFF -DOPENMM_BUILD_OPENCL_TESTS=OFF cd obj-x86_64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -DCMAKE_VERBOSE_MAKEFILE=ON "-DCMAKE_C_FLAGS_RELEASE=-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP" "-DCMAKE_CXX_FLAGS_RELEASE=-g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP" "-DCMAKE_SHARED_LINKER_FLAGS_RELEASE=-Wl,-z,relro -Wl,--as-needed" -DCMAKE_BUILD_RPATH_USE_ORIGIN=ON -DCMAKE_BUILD_TYPE=Release -DOPENMM_BUILD_SERIALIZATION_SUPPORT=ON -DOPENMM_BUILD_C_AND_FORTRAN_WRAPPERS=OFF -DOPENMM_BUILD_OPENCL_TESTS=OFF .. CMake Warning (dev) at CMakeLists.txt:15 (find_package): Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules are removed. Run "cmake --help-policy CMP0148" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. -- Found PythonInterp: /usr/bin/python3 (found version "3.11.9") CMake Warning (dev) at CMakeLists.txt:21 (PROJECT): cmake_minimum_required() should be called prior to this top-level project() call. Please see the cmake-commands(7) manual for usage documentation of both commands. This warning is for project developers. Use -Wno-dev to suppress it. -- The C compiler identification is GNU 13.2.0 -- The CXX compiler identification is GNU 13.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done CMake Deprecation Warning at CMakeLists.txt:25 (CMAKE_POLICY): The OLD behavior for policy CMP0042 will be removed from a future version of CMake. The cmake-policies(7) manual explains that the OLD behaviors of all policies are deprecated and that a policy should be set to OLD only under specific short-term circumstances. Projects should be ported to the NEW behavior and not rely on setting a policy to OLD. CMake Warning (dev) at CMakeLists.txt:30 (INCLUDE): Policy CMP0145 is not set: The Dart and FindDart modules are removed. Run "cmake --help-policy CMP0145" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at /usr/share/cmake-3.29/Modules/Dart.cmake:47 (message): Policy CMP0145 is not set: The Dart and FindDart modules are removed. Run "cmake --help-policy CMP0145" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): CMakeLists.txt:30 (INCLUDE) This warning is for project developers. Use -Wno-dev to suppress it. -- Found Doxygen: /usr/bin/doxygen (found version "1.9.8") found components: doxygen missing components: dot -- Configuring done (7.6s) -- Generating done (3.2s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR FETCHCONTENT_FULLY_DISCONNECTED OPENMM_BUILD_SERIALIZATION_SUPPORT -- Build files have been written to: /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu make[1]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg' dh_auto_build -O--buildsystem=cmake cd obj-x86_64-linux-gnu && make -j20 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/openmm-8.1.1+dfsg -B/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/CMakeFiles /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f CMakeFiles/OpenMM.dir/build.make CMakeFiles/OpenMM.dir/depend make -f platforms/common/CMakeFiles/CommonKernels.dir/build.make platforms/common/CMakeFiles/CommonKernels.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/amoeba/platforms/common/CMakeFiles/AmoebaCommonKernels.dir/build.make plugins/amoeba/platforms/common/CMakeFiles/AmoebaCommonKernels.dir/depend cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/common /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/common /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/common/CMakeFiles/CommonKernels.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/rpmd/platforms/common/CMakeFiles/RpmdCommonKernels.dir/build.make plugins/rpmd/platforms/common/CMakeFiles/RpmdCommonKernels.dir/depend cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/common /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/common /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/common/CMakeFiles/AmoebaCommonKernels.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/drude/platforms/common/CMakeFiles/DrudeCommonKernels.dir/build.make plugins/drude/platforms/common/CMakeFiles/DrudeCommonKernels.dir/depend cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/common /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/common /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/common/CMakeFiles/RpmdCommonKernels.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/CMakeFiles/OpenMM.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f wrappers/python/CMakeFiles/BuildModule.dir/build.make wrappers/python/CMakeFiles/BuildModule.dir/depend cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/common /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/common /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/common/CMakeFiles/DrudeCommonKernels.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python/CMakeFiles/BuildModule.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/amoeba/platforms/common/CMakeFiles/AmoebaCommonKernels.dir/build.make plugins/amoeba/platforms/common/CMakeFiles/AmoebaCommonKernels.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/rpmd/platforms/common/CMakeFiles/RpmdCommonKernels.dir/build.make plugins/rpmd/platforms/common/CMakeFiles/RpmdCommonKernels.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/common/CMakeFiles/CommonKernels.dir/build.make platforms/common/CMakeFiles/CommonKernels.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f wrappers/python/CMakeFiles/BuildModule.dir/build.make wrappers/python/CMakeFiles/BuildModule.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f CMakeFiles/OpenMM.dir/build.make CMakeFiles/OpenMM.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/drude/platforms/common/CMakeFiles/DrudeCommonKernels.dir/build.make plugins/drude/platforms/common/CMakeFiles/DrudeCommonKernels.dir/build [ 0%] Generating src/CommonAmoebaKernelSources.cpp, src/CommonAmoebaKernelSources.h cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/common && /usr/bin/cmake -D KERNEL_SOURCE_DIR=/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/common/src -D KERNELS_CPP=/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/common/src/CommonAmoebaKernelSources.cpp -D KERNELS_H=/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/common/src/CommonAmoebaKernelSources.h -D KERNEL_SOURCE_CLASS=CommonAmoebaKernelSources -D KERNEL_FILE_EXTENSION=cc -P /build/reproducible-path/openmm-8.1.1+dfsg/cmake_modules/EncodeKernelFiles.cmake [ 0%] Generating src/CommonRpmdKernelSources.cpp, src/CommonRpmdKernelSources.h make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/common && /usr/bin/cmake -D KERNEL_SOURCE_DIR=/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/common/src -D KERNELS_CPP=/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/common/src/CommonRpmdKernelSources.cpp -D KERNELS_H=/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/common/src/CommonRpmdKernelSources.h -D KERNEL_SOURCE_CLASS=CommonRpmdKernelSources -D KERNEL_FILE_EXTENSION=cc -P /build/reproducible-path/openmm-8.1.1+dfsg/cmake_modules/EncodeKernelFiles.cmake [ 0%] Generating src/CommonKernelSources.cpp, src/CommonKernelSources.h cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/common && /usr/bin/cmake -D KERNEL_SOURCE_DIR=/build/reproducible-path/openmm-8.1.1+dfsg/platforms/common/src -D KERNELS_CPP=/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/common/src/CommonKernelSources.cpp -D KERNELS_H=/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/common/src/CommonKernelSources.h -D KERNEL_SOURCE_CLASS=CommonKernelSources -D KERNEL_FILE_EXTENSION=cc -P /build/reproducible-path/openmm-8.1.1+dfsg/cmake_modules/EncodeKernelFiles.cmake make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/MANIFEST.in to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/MANIFEST.in cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/MANIFEST.in /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/MANIFEST.in [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/__init__.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/__init__.py [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/amd.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/amd.py [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/amberprmtopfile.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/amberprmtopfile.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/__init__.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/__init__.py [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/charmmcrdfiles.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/charmmcrdfiles.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/amd.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/amd.py [ 0%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/ATMForce.cpp.o [ 0%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/ATMForceImpl.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/amberprmtopfile.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/amberprmtopfile.py /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/ATMForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/ATMForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/ATMForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/ATMForceImpl.cpp [ 0%] Generating src/CommonDrudeKernelSources.cpp, src/CommonDrudeKernelSources.h /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/ATMForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/ATMForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/ATMForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/ATMForce.cpp [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/__init__.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/__init__.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/charmmcrdfiles.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/charmmcrdfiles.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/common && /usr/bin/cmake -D KERNEL_SOURCE_DIR=/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/common/src -D KERNELS_CPP=/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/common/src/CommonDrudeKernelSources.cpp -D KERNELS_H=/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/common/src/CommonDrudeKernelSources.h -D KERNEL_SOURCE_CLASS=CommonDrudeKernelSources -D KERNEL_FILE_EXTENSION=cc -P /build/reproducible-path/openmm-8.1.1+dfsg/cmake_modules/EncodeKernelFiles.cmake [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/amberinpcrdfile.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/amberinpcrdfile.py [ 0%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/AssertionUtilities.cpp.o [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/checkpointreporter.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/checkpointreporter.py /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/AssertionUtilities.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/AssertionUtilities.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/AssertionUtilities.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/AssertionUtilities.cpp [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/charmmparameterset.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/charmmparameterset.py make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/__init__.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/__init__.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/amberinpcrdfile.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/amberinpcrdfile.py [ 0%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/AndersenThermostat.cpp.o [ 0%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/AndersenThermostatImpl.cpp.o [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/charmmpsffile.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/charmmpsffile.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/charmmparameterset.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/charmmparameterset.py /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/AndersenThermostat.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/AndersenThermostat.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/AndersenThermostat.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/AndersenThermostat.cpp /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/AndersenThermostatImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/AndersenThermostatImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/AndersenThermostatImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/AndersenThermostatImpl.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/charmmpsffile.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/charmmpsffile.py [ 0%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/BrownianIntegrator.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/checkpointreporter.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/checkpointreporter.py /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/BrownianIntegrator.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/BrownianIntegrator.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/BrownianIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/BrownianIntegrator.cpp [ 0%] Built target RpmdCommonKernels [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/DLPC.pdb to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/DLPC.pdb cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/DLPC.pdb /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/DLPC.pdb [ 0%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CMAPTorsionForce.cpp.o [ 0%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CMAPTorsionForceImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CMAPTorsionForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CMAPTorsionForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CMAPTorsionForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CMAPTorsionForce.cpp [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/DLPE.pdb to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/DLPE.pdb /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CMAPTorsionForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CMAPTorsionForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CMAPTorsionForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CMAPTorsionForceImpl.cpp [ 0%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CMMotionRemover.cpp.o [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/DPPC.pdb to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/DPPC.pdb [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/DMPC.pdb to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/DMPC.pdb cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/DLPE.pdb /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/DLPE.pdb make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/DPPC.pdb /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/DPPC.pdb make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CMMotionRemover.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CMMotionRemover.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CMMotionRemover.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CMMotionRemover.cpp [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/POPE.pdb to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/POPE.pdb cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/DMPC.pdb /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/DMPC.pdb [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/DOPC.pdb to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/DOPC.pdb make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/DOPC.pdb /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/DOPC.pdb cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/POPE.pdb /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/POPE.pdb [ 0%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CMMotionRemoverImpl.cpp.o [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/POPC.pdb to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/POPC.pdb cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/POPC.pdb /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/POPC.pdb /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CMMotionRemoverImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CMMotionRemoverImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CMMotionRemoverImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CMMotionRemoverImpl.cpp [ 0%] Built target DrudeCommonKernels [ 0%] Built target AmoebaCommonKernels [ 0%] Built target CommonKernels [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/absinth.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/absinth.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/absinth.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/absinth.xml [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber03_obc.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber03_obc.xml [ 0%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CompiledExpressionSet.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber03_obc.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber03_obc.xml /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CompiledExpressionSet.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CompiledExpressionSet.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CompiledExpressionSet.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CompiledExpressionSet.cpp [ 0%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CompoundIntegrator.cpp.o [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber10_obc.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber10_obc.xml /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CompoundIntegrator.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CompoundIntegrator.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CompoundIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CompoundIntegrator.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber10_obc.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber10_obc.xml [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber10.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber10.xml [ 2%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber03.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber03.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber10.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber10.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber03.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber03.xml [ 2%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14-all.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14-all.xml [ 2%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/Context.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/Context.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/Context.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/Context.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/Context.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14-all.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14-all.xml [ 2%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/DNA.OL15.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/DNA.OL15.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/DNA.OL15.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/DNA.OL15.xml [ 2%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/ContextImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/ContextImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/ContextImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/ContextImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/ContextImpl.cpp [ 4%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomAngleForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomAngleForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomAngleForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomAngleForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CustomAngleForce.cpp [ 4%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/RNA.OL3.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/RNA.OL3.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/RNA.OL3.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/RNA.OL3.xml [ 4%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/DNA.bsc1.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/DNA.bsc1.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/DNA.bsc1.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/DNA.bsc1.xml [ 4%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/GLYCAM_06j-1.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/GLYCAM_06j-1.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/GLYCAM_06j-1.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/GLYCAM_06j-1.xml [ 4%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/lipid17.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/lipid17.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/lipid17.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/lipid17.xml [ 4%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomAngleForceImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomAngleForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomAngleForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomAngleForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CustomAngleForceImpl.cpp [ 4%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/opc.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/opc.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/opc.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/opc.xml [ 4%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/protein.ff15ipq.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/protein.ff15ipq.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/protein.ff15ipq.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/protein.ff15ipq.xml [ 4%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/protein.ff14SB.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/protein.ff14SB.xml [ 4%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/opc3.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/opc3.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/opc3.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/opc3.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/protein.ff14SB.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/protein.ff14SB.xml [ 4%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomBondForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomBondForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomBondForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomBondForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CustomBondForce.cpp [ 4%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/spce.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/spce.xml [ 4%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/tip3p.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/tip3p.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/spce.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/spce.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/tip3p.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/tip3p.xml [ 4%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/tip3pfb.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/tip3pfb.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/tip3pfb.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/tip3pfb.xml [ 4%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/tip4pfb.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/tip4pfb.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/tip4pfb.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/tip4pfb.xml [ 4%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/tip4pew.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/tip4pew.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/tip4pew.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/tip4pew.xml [ 4%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber96.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber96.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber96.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber96.xml [ 6%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber96_obc.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber96_obc.xml [ 6%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomBondForceImpl.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber96_obc.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber96_obc.xml /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomBondForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomBondForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomBondForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CustomBondForceImpl.cpp [ 6%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber99Test.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber99Test.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber99Test.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber99Test.xml [ 6%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber99sb.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber99sb.xml [ 6%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber99_obc.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber99_obc.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber99sb.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber99sb.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber99_obc.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber99_obc.xml [ 6%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber99sbildn.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber99sbildn.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber99sbildn.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber99sbildn.xml [ 6%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber99sbnmr.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber99sbnmr.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber99sbnmr.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber99sbnmr.xml [ 6%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amberfb15.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amberfb15.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amberfb15.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amberfb15.xml [ 6%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amoeba2009.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amoeba2009.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amoeba2009.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amoeba2009.xml [ 6%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amoeba2013.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amoeba2013.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amoeba2013.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amoeba2013.xml [ 6%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amoeba2009_gk.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amoeba2009_gk.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amoeba2009_gk.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amoeba2009_gk.xml [ 6%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amoeba2018.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amoeba2018.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amoeba2018.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amoeba2018.xml [ 6%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amoeba2013_gk.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amoeba2013_gk.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amoeba2013_gk.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amoeba2013_gk.xml [ 6%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amoeba2018_gk.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amoeba2018_gk.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amoeba2018_gk.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amoeba2018_gk.xml [ 6%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/charmm36.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/charmm36.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36.xml [ 6%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/charmm36/spce.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36/spce.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/charmm36/spce.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36/spce.xml [ 6%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomCPPForceImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomCPPForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomCPPForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomCPPForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CustomCPPForceImpl.cpp [ 6%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/charmm36/tip3p-pme-b.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36/tip3p-pme-b.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/charmm36/tip3p-pme-b.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36/tip3p-pme-b.xml [ 6%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/charmm36/tip3p-pme-f.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36/tip3p-pme-f.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/charmm36/tip3p-pme-f.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36/tip3p-pme-f.xml [ 6%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/charmm36/tip4p2005.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36/tip4p2005.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/charmm36/tip4p2005.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36/tip4p2005.xml [ 6%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomCVForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomCVForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomCVForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomCVForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CustomCVForce.cpp [ 6%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/charmm36/tip4pew.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36/tip4pew.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/charmm36/tip4pew.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36/tip4pew.xml [ 6%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomCVForceImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomCVForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomCVForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomCVForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CustomCVForceImpl.cpp [ 8%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomCentroidBondForce.cpp.o [ 8%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/charmm36/tip5p.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36/tip5p.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/charmm36/tip5p.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36/tip5p.xml /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomCentroidBondForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomCentroidBondForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomCentroidBondForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CustomCentroidBondForce.cpp [ 8%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/charmm36/tip5pew.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36/tip5pew.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/charmm36/tip5pew.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36/tip5pew.xml [ 8%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/charmm36/water.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36/water.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/charmm36/water.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36/water.xml [ 8%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/charmm_polar_2013.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm_polar_2013.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/charmm_polar_2013.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm_polar_2013.xml [ 8%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/charmm_polar_2019.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm_polar_2019.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/charmm_polar_2019.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm_polar_2019.xml [ 8%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/glycam-hydrogens.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/glycam-hydrogens.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/glycam-hydrogens.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/glycam-hydrogens.xml [ 8%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/hydrogens.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/hydrogens.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/hydrogens.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/hydrogens.xml [ 8%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/iamoeba.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/iamoeba.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/iamoeba.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/iamoeba.xml [ 8%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/implicit/gbn.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/implicit/gbn.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/implicit/gbn.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/implicit/gbn.xml [ 8%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/implicit/gbn2.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/implicit/gbn2.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/implicit/gbn2.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/implicit/gbn2.xml [ 8%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/implicit/hct.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/implicit/hct.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/implicit/hct.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/implicit/hct.xml [ 8%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/implicit/obc1.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/implicit/obc1.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/implicit/obc1.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/implicit/obc1.xml [ 8%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/implicit/obc2.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/implicit/obc2.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/implicit/obc2.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/implicit/obc2.xml [ 8%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/opc.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/opc.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/opc.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/opc.xml [ 8%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomCentroidBondForceImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomCentroidBondForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomCentroidBondForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomCentroidBondForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CustomCentroidBondForceImpl.cpp [ 8%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/opc3.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/opc3.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/opc3.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/opc3.xml [ 8%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/pdbNames.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/pdbNames.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/pdbNames.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/pdbNames.xml [ 8%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/residues.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/residues.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/residues.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/residues.xml [ 8%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomCompoundBondForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomCompoundBondForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomCompoundBondForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomCompoundBondForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CustomCompoundBondForce.cpp [ 8%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/spce.pdb to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/spce.pdb cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/spce.pdb /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/spce.pdb [ 8%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/spce.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/spce.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/spce.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/spce.xml [ 8%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/swm4ndp.pdb to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/swm4ndp.pdb cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/swm4ndp.pdb /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/swm4ndp.pdb [ 10%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/swm4ndp.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/swm4ndp.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/swm4ndp.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/swm4ndp.xml [ 10%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/test.pdb to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/test.pdb cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/test.pdb /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/test.pdb [ 10%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomCompoundBondForceImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomCompoundBondForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomCompoundBondForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomCompoundBondForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CustomCompoundBondForceImpl.cpp [ 10%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/tip3p.pdb to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/tip3p.pdb cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/tip3p.pdb /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/tip3p.pdb [ 10%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/tip3p.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/tip3p.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/tip3p.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/tip3p.xml [ 10%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomExternalForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomExternalForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomExternalForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomExternalForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CustomExternalForce.cpp [ 10%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/tip3pfb.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/tip3pfb.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/tip3pfb.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/tip3pfb.xml [ 10%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/tip4pew.pdb to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/tip4pew.pdb cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/tip4pew.pdb /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/tip4pew.pdb [ 10%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/tip4pew.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/tip4pew.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/tip4pew.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/tip4pew.xml [ 10%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomExternalForceImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomExternalForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomExternalForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomExternalForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CustomExternalForceImpl.cpp [ 10%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/tip4pfb.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/tip4pfb.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/tip4pfb.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/tip4pfb.xml [ 10%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/tip5p.pdb to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/tip5p.pdb cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/tip5p.pdb /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/tip5p.pdb [ 10%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/tip5p.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/tip5p.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/tip5p.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/tip5p.xml [ 10%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomGBForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomGBForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomGBForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomGBForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CustomGBForce.cpp [ 10%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/dcdfile.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/dcdfile.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/dcdfile.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/dcdfile.py [ 10%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/dcdreporter.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/dcdreporter.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/dcdreporter.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/dcdreporter.py [ 10%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/desmonddmsfile.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/desmonddmsfile.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/desmonddmsfile.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/desmonddmsfile.py [ 10%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/element.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/element.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/element.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/element.py [ 10%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/forcefield.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/forcefield.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/forcefield.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/forcefield.py [ 10%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/gromacsgrofile.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/gromacsgrofile.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/gromacsgrofile.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/gromacsgrofile.py [ 10%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/gromacstopfile.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/gromacstopfile.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/gromacstopfile.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/gromacstopfile.py [ 10%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/__init__.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/__init__.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/__init__.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/__init__.py [ 10%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomGBForceImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomGBForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomGBForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomGBForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CustomGBForceImpl.cpp [ 10%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomHbondForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomHbondForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomHbondForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomHbondForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CustomHbondForce.cpp [ 10%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/amber_file_parser.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/amber_file_parser.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/amber_file_parser.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/amber_file_parser.py [ 12%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/argtracker.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/argtracker.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/argtracker.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/argtracker.py [ 12%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomHbondForceImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomHbondForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomHbondForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomHbondForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CustomHbondForceImpl.cpp [ 12%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/charmm/__init__.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/charmm/__init__.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/charmm/__init__.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/charmm/__init__.py [ 12%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/charmm/_charmmfile.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/charmm/_charmmfile.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/charmm/_charmmfile.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/charmm/_charmmfile.py [ 12%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/charmm/exceptions.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/charmm/exceptions.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/charmm/exceptions.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/charmm/exceptions.py [ 12%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomIntegrator.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomIntegrator.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomIntegrator.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CustomIntegrator.cpp [ 12%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/charmm/topologyobjects.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/charmm/topologyobjects.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/charmm/topologyobjects.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/charmm/topologyobjects.py [ 12%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/compiled.pyx to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/compiled.pyx cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/compiled.pyx /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/compiled.pyx [ 12%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomIntegratorUtilities.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomIntegratorUtilities.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomIntegratorUtilities.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomIntegratorUtilities.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CustomIntegratorUtilities.cpp [ 12%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/customgbforces.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/customgbforces.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/customgbforces.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/customgbforces.py [ 14%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomManyParticleForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomManyParticleForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomManyParticleForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomManyParticleForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CustomManyParticleForce.cpp [ 14%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/pdbstructure.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbstructure.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/pdbstructure.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbstructure.py [ 14%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/pdbx/__init__.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/__init__.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/pdbx/__init__.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/__init__.py [ 14%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/pdbx/reader/PdbxContainers.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/reader/PdbxContainers.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/pdbx/reader/PdbxContainers.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/reader/PdbxContainers.py [ 14%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/pdbx/reader/PdbxParser.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/reader/PdbxParser.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/pdbx/reader/PdbxParser.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/reader/PdbxParser.py [ 14%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/pdbx/reader/PdbxReadWriteTests.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/reader/PdbxReadWriteTests.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/pdbx/reader/PdbxReadWriteTests.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/reader/PdbxReadWriteTests.py [ 14%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomManyParticleForceImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomManyParticleForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomManyParticleForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomManyParticleForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CustomManyParticleForceImpl.cpp [ 14%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/pdbx/reader/PdbxReader.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/reader/PdbxReader.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/pdbx/reader/PdbxReader.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/reader/PdbxReader.py [ 14%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/pdbx/reader/PdbxReaderTests.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/reader/PdbxReaderTests.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/pdbx/reader/PdbxReaderTests.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/reader/PdbxReaderTests.py [ 14%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/pdbx/reader/__init__.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/reader/__init__.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/pdbx/reader/__init__.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/reader/__init__.py [ 14%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomNonbondedForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomNonbondedForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomNonbondedForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomNonbondedForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CustomNonbondedForce.cpp [ 14%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/pdbx/writer/PdbxWriter.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/writer/PdbxWriter.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/pdbx/writer/PdbxWriter.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/writer/PdbxWriter.py [ 14%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/pdbx/writer/PdbxWriterTests.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/writer/PdbxWriterTests.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/pdbx/writer/PdbxWriterTests.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/writer/PdbxWriterTests.py [ 14%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/pdbx/writer/__init__.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/writer/__init__.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/pdbx/writer/__init__.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/writer/__init__.py [ 14%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/singleton.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/singleton.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/singleton.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/singleton.py [ 14%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/unitcell.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/unitcell.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/unitcell.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/unitcell.py [ 14%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomNonbondedForceImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomNonbondedForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomNonbondedForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomNonbondedForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CustomNonbondedForceImpl.cpp [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/xtc_utils/include/xdrfile.h to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/xtc_utils/include/xdrfile.h cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/xtc_utils/include/xdrfile.h /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/xtc_utils/include/xdrfile.h [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/xtc_utils/include/xdrfile_xtc.h to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/xtc_utils/include/xdrfile_xtc.h cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/xtc_utils/include/xdrfile_xtc.h /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/xtc_utils/include/xdrfile_xtc.h [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/xtc_utils/include/xtc.h to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/xtc_utils/include/xtc.h cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/xtc_utils/include/xtc.h /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/xtc_utils/include/xtc.h [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/xtc_utils/src/xdrfile.cpp to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/xtc_utils/src/xdrfile.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/xtc_utils/src/xdrfile.cpp /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/xtc_utils/src/xdrfile.cpp [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/xtc_utils/src/xdrfile_xtc.cpp to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/xtc_utils/src/xdrfile_xtc.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/xtc_utils/src/xdrfile_xtc.cpp /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/xtc_utils/src/xdrfile_xtc.cpp [ 16%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomTorsionForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomTorsionForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomTorsionForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomTorsionForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CustomTorsionForce.cpp [ 16%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomTorsionForceImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomTorsionForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomTorsionForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomTorsionForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CustomTorsionForceImpl.cpp [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/xtc_utils/src/xtc.cpp to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/xtc_utils/src/xtc.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/xtc_utils/src/xtc.cpp /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/xtc_utils/src/xtc.cpp [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/xtc_utils/xtc.pyx to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/xtc_utils/xtc.pyx cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/xtc_utils/xtc.pyx /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/xtc_utils/xtc.pyx [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/xtc_utils/xtclib.pxd to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/xtc_utils/xtclib.pxd cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/xtc_utils/xtclib.pxd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/xtc_utils/xtclib.pxd [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/metadynamics.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/metadynamics.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/metadynamics.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/metadynamics.py [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/modeller.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/modeller.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/modeller.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/modeller.py [ 16%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/Force.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/Force.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/Force.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/Force.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/Force.cpp [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/pdbfile.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/pdbfile.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/pdbfile.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/pdbfile.py [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/pdbreporter.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/pdbreporter.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/pdbreporter.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/pdbreporter.py [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/pdbxfile.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/pdbxfile.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/pdbxfile.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/pdbxfile.py [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/simulatedtempering.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/simulatedtempering.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/simulatedtempering.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/simulatedtempering.py [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/simulation.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/simulation.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/simulation.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/simulation.py [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/statedatareporter.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/statedatareporter.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/statedatareporter.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/statedatareporter.py [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/topology.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/topology.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/topology.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/topology.py [ 16%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/ForceImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/ForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/ForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/ForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/ForceImpl.cpp [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/xtcfile.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/xtcfile.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/xtcfile.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/xtcfile.py [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/xtcreporter.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/xtcreporter.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/xtcreporter.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/xtcreporter.py [ 18%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/mtsintegrator.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/mtsintegrator.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/mtsintegrator.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/mtsintegrator.py [ 18%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/src/swig_doxygen/swig_lib/python/typemaps.i to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/swig_lib/python/typemaps.i cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/src/swig_doxygen/swig_lib/python/typemaps.i /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/swig_lib/python/typemaps.i [ 18%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/src/swig_doxygen/OpenMM.i to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/OpenMM.i cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/src/swig_doxygen/OpenMM.i /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/OpenMM.i [ 18%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/GBSAOBCForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/GBSAOBCForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/GBSAOBCForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/GBSAOBCForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/GBSAOBCForce.cpp [ 18%] Parsing OpenMM header files with doxygen... cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python/src/swig_doxygen/doxygen && /usr/bin/doxygen warning: Tag 'SYMBOL_CACHE_SIZE' at line 289 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'SHOW_DIRECTORIES' at line 473 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'COLS_IN_ALPHA_INDEX' at line 762 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'HTML_ALIGN_MEMBERS' at line 817 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'LATEX_SOURCE_CODE' at line 1066 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'XML_SCHEMA' at line 1158 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'XML_DTD' at line 1164 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'PERL_PATH' at line 1329 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'CLASS_DIAGRAMS' at line 1342 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'MSCGEN_PATH' at line 1351 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_FONTNAME' at line 1375 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_FONTSIZE' at line 1380 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_TRANSPARENT' at line 1504 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: argument 'a4wide' for option PAPER_TYPE is not a valid enum value Using the default: a4! warning: doxygen no longer ships with the FreeSans font. You may want to clear or change DOT_FONTNAME. Otherwise you run the risk that the wrong font is being used for dot generated graphs. Doxygen version used: 1.9.8 Searching for include files... Searching for example files... Searching for images... Searching for dot files... Searching for msc files... Searching for dia files... Searching for files to exclude Searching INPUT for files to process... Searching for files in directory /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi Searching for files in directory /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include Searching for files in directory /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm Searching for files in directory /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/internal Searching for files in directory /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src Searching for files in directory /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi Searching for files in directory /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include Searching for files in directory /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm Searching for files in directory /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/internal Searching for files in directory /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/src Searching for files in directory /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi Searching for files in directory /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/include Searching for files in directory /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/include/openmm Searching for files in directory /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/include/openmm/internal Searching for files in directory /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/src Searching for files in directory /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi Searching for files in directory /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include Searching for files in directory /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include/openmm Searching for files in directory /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include/openmm/internal Searching for files in directory /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/src Reading and parsing tag files Parsing files Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/OpenMM.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/OpenMM.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/AndersenThermostat.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/AndersenThermostat.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/ATMForce.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/ATMForce.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/BrownianIntegrator.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/BrownianIntegrator.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CMAPTorsionForce.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CMAPTorsionForce.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CMMotionRemover.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CMMotionRemover.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CompoundIntegrator.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CompoundIntegrator.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/Context.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/Context.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomAngleForce.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomAngleForce.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomBondForce.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomBondForce.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomCentroidBondForce.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomCentroidBondForce.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomCompoundBondForce.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomCompoundBondForce.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomCVForce.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomCVForce.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomExternalForce.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomExternalForce.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomGBForce.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomGBForce.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomHbondForce.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomHbondForce.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomIntegrator.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomIntegrator.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomManyParticleForce.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomManyParticleForce.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomNonbondedForce.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomNonbondedForce.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomTorsionForce.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomTorsionForce.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/Force.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/Force.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/GayBerneForce.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/GayBerneForce.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/GBSAOBCForce.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/GBSAOBCForce.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/HarmonicAngleForce.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/HarmonicAngleForce.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/HarmonicBondForce.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/HarmonicBondForce.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/Integrator.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/Integrator.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/LangevinIntegrator.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/LangevinIntegrator.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/LangevinMiddleIntegrator.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/LangevinMiddleIntegrator.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/LocalEnergyMinimizer.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/LocalEnergyMinimizer.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/MonteCarloAnisotropicBarostat.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/MonteCarloAnisotropicBarostat.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/MonteCarloBarostat.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/MonteCarloBarostat.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/MonteCarloFlexibleBarostat.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/MonteCarloFlexibleBarostat.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/MonteCarloMembraneBarostat.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/MonteCarloMembraneBarostat.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/NonbondedForce.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/NonbondedForce.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/NoseHooverChain.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/NoseHooverChain.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/NoseHooverIntegrator.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/NoseHooverIntegrator.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/OpenMMException.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/OpenMMException.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/PeriodicTorsionForce.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/PeriodicTorsionForce.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/RBTorsionForce.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/RBTorsionForce.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/RMSDForce.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/RMSDForce.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/State.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/State.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/System.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/System.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/TabulatedFunction.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/TabulatedFunction.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/Units.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/Units.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/VariableLangevinIntegrator.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/VariableLangevinIntegrator.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/VariableVerletIntegrator.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/VariableVerletIntegrator.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/Vec3.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/Vec3.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/VerletIntegrator.h... Parsing file /build/reprodu[ 18%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/GBSAOBCForceImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/GBSAOBCForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/GBSAOBCForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/GBSAOBCForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/GBSAOBCForceImpl.cpp cible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/VerletIntegrator.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/VirtualSite.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/VirtualSite.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/olla/include/openmm/Platform.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/olla/include/openmm/Platform.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/serialization/include/openmm/serialization/SerializationNode.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/serialization/include/openmm/serialization/SerializationNode.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/serialization/include/openmm/serialization/SerializationProxy.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/serialization/include/openmm/serialization/SerializationProxy.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/serialization/include/openmm/serialization/XmlSerializer.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/serialization/include/openmm/serialization/XmlSerializer.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/AmoebaGeneralizedKirkwoodForce.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/AmoebaGeneralizedKirkwoodForce.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/AmoebaMultipoleForce.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/AmoebaMultipoleForce.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/AmoebaTorsionTorsionForce.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/AmoebaTorsionTorsionForce.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/AmoebaVdwForce.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/AmoebaVdwForce.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/AmoebaWcaDispersionForce.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/AmoebaWcaDispersionForce.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/HippoNonbondedForce.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/HippoNonbondedForce.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/OpenMMAmoeba.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/OpenMMAmoeba.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/include/openmm/RPMDIntegrator.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/include/openmm/RPMDIntegrator.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/include/openmm/RPMDMonteCarloBarostat.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/include/openmm/RPMDMonteCarloBarostat.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include/openmm/DrudeForce.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include/openmm/DrudeForce.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include/openmm/DrudeIntegrator.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include/openmm/DrudeIntegrator.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include/openmm/DrudeLangevinIntegrator.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include/openmm/DrudeLangevinIntegrator.h... Preprocessing /build/repr[ 18%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/GayBerneForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/GayBerneForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/GayBerneForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/GayBerneForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/GayBerneForce.cpp [ 18%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/GayBerneForceImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/GayBerneForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/GayBerneForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/GayBerneForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/GayBerneForceImpl.cpp oducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include/openmm/DrudeNoseHooverIntegrator.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include/openmm/DrudeNoseHooverIntegrator.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include/openmm/DrudeSCFIntegrator.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include/openmm/DrudeSCFIntegrator.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include/OpenMMDrude.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include/OpenMMDrude.h... Building macro definition list... Building group list... Building directory list... Building namespace list... Building file list... Building class list... Building concept list... Computing nesting relations for classes... Associating documentation with classes... Associating documentation with concepts... Associating documentation with modules... Building example list... Searching for enumerations... Searching for documented typedefs... Searching for members imported via using declarations... Searching for included using directives... Searching for documented variables... Building interface member list... Building member list... Searching for friends... Searching for documented defines... Computing class inheritance relations... Computing class usage relations... Flushing cached template relations that have become invalid... Computing class relations... Add enum values to enums... Searching for member function documentation... Creating members for template instances... Building page list... Search for main page... Computing page relations... Determining the scope of groups... Computing module relations... Sorting lists... Determining which enums are documented Computing member relations... Building full member lists recursively... Adding members to member groups. Computing member references... Inheriting documentation... Generating disk names... Adding source references... Adding xrefitems... Sorting member lists... Setting anonymous enum type... Computing dependencies between directories... Generating citations page... Counting members... Counting data structures... Resolving user defined references... Finding anchors and sections in the documentation... Transferring function references... Combining using relations... Adding members to index pages... Correcting members for VHDL... Computing tooltip texts... Generating style sheet... Generating search indices... Generating example documentation... Generating file sources... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/olla/include/openmm/Platform.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/OpenMM.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/AndersenThermostat.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/ATMForce.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/BrownianIntegrator.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CMAPTorsionForce.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CMMotionRemover.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CompoundIntegrator.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/Context.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomAngleForce.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomBondForce.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomCentroidBondForce.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomCompoundBondForce.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomCVForce.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomExternalForce.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomGBForce.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomHbondForce.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomIntegrator.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomManyParticleForce.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomNonbondedForce.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomTorsionForce.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/Force.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/GayBerneForce.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/GBSAOBCForce.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/HarmonicAngleForce.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/HarmonicBondForce.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/Integrator.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/LangevinIntegrator.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/LangevinMiddleIntegrator.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/LocalEnergyMinimizer.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/MonteCarloAnisotropicBarostat.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/MonteCarloBarostat.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/MonteCarloFlexibleBarostat.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/MonteCarloMembraneBarostat.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/NonbondedForce.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/NoseHooverChain.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/NoseHooverIntegrator.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/OpenMMException.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/PeriodicTorsionForce.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/RBTorsionForce.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/RMSDForce.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/State.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/System.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/TabulatedFunction.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/Units.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/VariableLangevinIntegrator.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/VariableVerletIntegrator.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/Vec3.h... Generating code for file /build/reproducible-path/openm/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/TabulatedFunction.h:204: warning: The following parameter of OpenMM::Continuous3DFunction::Continuous3DFunction(int xsize, int ysize, int zsize, const std::vector< double > &values, double xmin, double xmax, double ymin, double ymax, double zmin, double zmax, bool periodic=false) is not documented: parameter 'zsize' m-8.1.1+dfsg/openmmapi/include/openmm/VerletIntegrator.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/VirtualSite.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/AmoebaGeneralizedKirkwoodForce.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/AmoebaMultipoleForce.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/AmoebaTorsionTorsionForce.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/AmoebaVdwForce.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/AmoebaWcaDispersionForce.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/HippoNonbondedForce.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/OpenMMAmoeba.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include/openmm/DrudeForce.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include/openmm/DrudeIntegrator.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include/openmm/DrudeLangevinIntegrator.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include/openmm/DrudeNoseHooverIntegrator.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include/openmm/DrudeSCFIntegrator.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include/OpenMMDrude.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/include/openmm/RPMDIntegrator.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/include/openmm/RPMDMonteCarloBarostat.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/serialization/include/openmm/serialization/SerializationNode.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/serialization/include/openmm/serialization/SerializationProxy.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/serialization/include/openmm/serialization/XmlSerializer.h... Generating file documentation... Generating docs for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/Units.h... Generating page documentation... Generating docs for page deprecated... Generating group documentation... Generating class documentation... Generating concept documentation... Generating module documentation... Generating namespace documentation... Generating docs for compound OpenMM::AmoebaGeneralizedKirkwoodForce... Generating docs for compound OpenMM::AmoebaMultipoleForce... Generating docs for compound OpenMM::AmoebaTorsionTorsionForce... Generating docs for compound OpenMM::AmoebaVdwForce... Generating docs for compound OpenMM::AmoebaWcaDispersionForce... Generating docs for compound OpenMM::AndersenThermostat... Generating docs for compound OpenMM::ATMForce... Generating docs for compound OpenMM::BrownianIntegrator... Generating docs for compound OpenMM::CMAPTorsionForce... Generating docs for compound OpenMM::CMMotionRemover... Generating docs for compound OpenMM::CompoundIntegrator... Generating docs for compound OpenMM::Context... Generating docs for compound OpenMM::Continuous1DFunction... Generating docs for compound OpenMM::Continuous2DFunction... Generating docs for compound OpenMM::Continuous3DFunction... Generating docs for compound OpenMM::CustomAngleForce... Generating docs for compound OpenMM::CustomBondForce... Generating docs for compound OpenMM::CustomCentroidBondForce... Generating docs for compound OpenMM::CustomCompoundBondForce... Generating docs for compound OpenMM::CustomC[ 18%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/HarmonicAngleForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/HarmonicAngleForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/HarmonicAngleForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/HarmonicAngleForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/HarmonicAngleForce.cpp [ 18%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/HarmonicAngleForceImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/HarmonicAngleForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/HarmonicAngleForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/HarmonicAngleForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/HarmonicAngleForceImpl.cpp /build/reproducible-path/openmm-8.1.1+dfsg/serialization/include/openmm/serialization/SerializationNode.h:95: warning: The following parameter of OpenMM::SerializationNode::getChildNode(const std::string &name) is not documented: parameter 'name' /build/reproducible-path/openmm-8.1.1+dfsg/serialization/include/openmm/serialization/SerializationNode.h:88: warning: The following parameter of OpenMM::SerializationNode::getChildNode(const std::string &name) const is not documented: parameter 'name' [ 18%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/HarmonicBondForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/HarmonicBondForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/HarmonicBondForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/HarmonicBondForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/HarmonicBondForce.cpp [ 18%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/HarmonicBondForceImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/HarmonicBondForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/HarmonicBondForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/HarmonicBondForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/HarmonicBondForceImpl.cpp [ 18%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/Integrator.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/Integrator.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/Integrator.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/Integrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/Integrator.cpp VForce... Generating docs for compound OpenMM::CustomExternalForce... Generating docs for compound OpenMM::CustomGBForce... Generating docs for compound OpenMM::CustomHbondForce... Generating docs for compound OpenMM::CustomIntegrator... Generating docs for compound OpenMM::CustomManyParticleForce... Generating docs for compound OpenMM::CustomNonbondedForce... Generating docs for compound OpenMM::CustomTorsionForce... Generating docs for compound OpenMM::Discrete1DFunction... Generating docs for compound OpenMM::Discrete2DFunction... Generating docs for compound OpenMM::Discrete3DFunction... Generating docs for compound OpenMM::DrudeForce... Generating docs for compound OpenMM::DrudeIntegrator... Generating docs for compound OpenMM::DrudeLangevinIntegrator... Generating docs for compound OpenMM::DrudeNoseHooverIntegrator... Generating docs for compound OpenMM::DrudeSCFIntegrator... Generating docs for compound OpenMM::Force... Generating docs for compound OpenMM::GayBerneForce... Generating docs for compound OpenMM::GBSAOBCForce... Generating docs for compound OpenMM::HarmonicAngleForce... Generating docs for compound OpenMM::HarmonicBondForce... Generating docs for compound OpenMM::HippoNonbondedForce... Generating docs for compound OpenMM::Integrator... Generating docs for compound OpenMM::LangevinIntegrator... Generating docs for compound OpenMM::LangevinMiddleIntegrator... Generating docs for compound OpenMM::LocalCoordinatesSite... Generating docs for compound OpenMM::LocalEnergyMinimizer... Generating docs for compound OpenMM::MinimizationReporter... Generating docs for compound OpenMM::MonteCarloAnisotropicBarostat... Generating docs for compound OpenMM::MonteCarloBarostat... Generating docs for compound OpenMM::MonteCarloFlexibleBarostat... Generating docs for compound OpenMM::MonteCarloMembraneBarostat... Generating docs for compound OpenMM::NonbondedForce... Generating docs for compound OpenMM::NoseHooverChain... Generating docs for compound OpenMM::NoseHooverIntegrator... Generating docs for compound OpenMM::OpenMMException... Generating docs for compound OpenMM::OutOfPlaneSite... Generating docs for compound OpenMM::PeriodicTorsionForce... Generating docs for compound OpenMM::Platform... Generating docs for compound OpenMM::RBTorsionForce... Generating docs for compound OpenMM::RMSDForce... Generating docs for compound OpenMM::RPMDIntegrator... Generating docs for compound OpenMM::RPMDMonteCarloBarostat... Generating docs for compound OpenMM::SerializationNode... Generating docs for compound OpenMM::SerializationProxy... Generating docs for compound OpenMM::State... Generating docs for compound OpenMM::System... Generating docs for compound OpenMM::TabulatedFunction... Generating docs for compound OpenMM::ThreeParticleAverageSite... Generating docs for compound OpenMM::TwoParticleAverageSite... Generating docs for compound OpenMM::VariableLangevinIntegrator... Generating docs for compound OpenMM::VariableVerletIntegrator... Generating docs for compound OpenMM::Vec3... Generating docs for compound OpenMM::VerletIntegrator... Generating docs for compound OpenMM::VirtualSite... Generating docs for compound OpenMM::XmlSerializer... Generating graph info page... Generating directory documentation... Generating index page... Generating page index... Generating topic index... Generating module index... Generating module member index... Generating namespace index... Generating namespace member index... Generating concept index... Generating annotated compound index... Generating alphabetical compound index... Generating hierarchical class index... Generating member index... Generating file index... Generating file member index... Generating example index... finalizing index lists... writing tag file... Generating XML output... Generating XML output for class OpenMM::AmoebaGeneralizedKirkwoodForce Generating XML output for class OpenMM::AmoebaMultipoleForce Generating XML output for class OpenMM::AmoebaTorsionTorsionForce Generating XML output for class OpenMM::AmoebaVdwForce Generating XML output for class OpenMM::Am/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/TabulatedFunction.h:204: warning: The following parameter of OpenMM::Continuous3DFunction::Continuous3DFunction(int xsize, int ysize, int zsize, const std::vector< double > &values, double xmin, double xmax, double ymin, double ymax, double zmin, double zmax, bool periodic=false) is not documented: parameter 'zsize' oebaWcaDispersionForce Generating XML output for class OpenMM::AndersenThermostat Generating XML output for class OpenMM::CustomAngleForce::AngleInfo Generating XML output for class OpenMM::HarmonicAngleForce::AngleInfo Generating XML output for class OpenMM::CustomAngleForce::AngleParameterInfo Generating XML output for class OpenMM::ATMForce Generating XML output for class OpenMM::CustomBondForce::BondInfo Generating XML output for class OpenMM::CustomCentroidBondForce::BondInfo Generating XML output for class OpenMM::CustomCompoundBondForce::BondInfo Generating XML output for class OpenMM::HarmonicBondForce::BondInfo Generating XML output for class OpenMM::CustomBondForce::BondParameterInfo Generating XML output for class OpenMM::CustomCentroidBondForce::BondParameterInfo Generating XML output for class OpenMM::CustomCompoundBondForce::BondParameterInfo Generating XML output for class OpenMM::BrownianIntegrator Generating XML output for class OpenMM::CMAPTorsionForce Generating XML output for class OpenMM::CMAPTorsionForce::CMAPTorsionInfo Generating XML output for class OpenMM::CMMotionRemover Generating XML output for class OpenMM::CompoundIntegrator Generating XML output for class OpenMM::CustomGBForce::ComputationInfo Generating XML output for class OpenMM::CustomIntegrator::ComputationInfo Generating XML output for class OpenMM::CustomNonbondedForce::ComputedValueInfo Generating XML output for class OpenMM::Context Generating XML output for class OpenMM::Continuous1DFunction Generating XML output for class OpenMM::Continuous2DFunction Generating XML output for class OpenMM::Continuous3DFunction Generating XML output for class OpenMM::CustomAngleForce Generating XML output for class OpenMM::CustomBondForce Generating XML output for class OpenMM::CustomCentroidBondForce Generating XML output for class OpenMM::CustomCompoundBondForce Generating XML output for class OpenMM::CustomCVForce Generating XML output for class OpenMM::CustomExternalForce Generating XML output for class OpenMM::CustomGBForce Generating XML output for class OpenMM::CustomHbondForce Generating XML output for class OpenMM::CustomIntegrator Generating XML output for class OpenMM::CustomManyParticleForce Generating XML output for class OpenMM::CustomNonbondedForce Generating XML output for class OpenMM::CustomTorsionForce Generating XML output for class OpenMM::Discrete1DFunction Generating XML output for class OpenMM::Discrete2DFunction Generating XML output for class OpenMM::Discrete3DFunction Generating XML output for class OpenMM::DrudeForce Generating XML output for class OpenMM::DrudeIntegrator Generating XML output for class OpenMM::DrudeLangevinIntegrator Generating XML output for class OpenMM::DrudeNoseHooverIntegrator Generating XML output for class OpenMM::DrudeSCFIntegrator Generating XML output for class OpenMM::GayBerneForce::ExceptionInfo Generating XML output for class OpenMM::HippoNonbondedForce::ExceptionInfo Generating XML output for class OpenMM::NonbondedForce::ExceptionInfo Generating XML output for class OpenMM::NonbondedForce::ExceptionOffsetInfo Generating XML output for class OpenMM::CustomGBForce::ExclusionInfo Generating XML output for class OpenMM::CustomHbondForce::ExclusionInfo Generating XML output for class OpenMM::CustomManyParticleForce::ExclusionInfo Generating XML output for class OpenMM::CustomNonbondedForce::ExclusionInfo Generating XML output for class OpenMM::Force Generating XML output for class OpenMM::CustomCentroidBondForce::FunctionInfo Generating XML output for class OpenMM::CustomCompoundBondForce::FunctionInfo Generating XML output for class OpenMM::CustomCVForce::FunctionInfo Generating XML output for class OpenMM::CustomGBForce::FunctionInfo Generating XML output for class OpenMM::CustomHbondForce::FunctionInfo Generating XML output for class OpenMM::CustomIntegrator::FunctionInfo Generating XML output for class OpenMM::CustomManyParticleForce::FunctionInfo Generating XML output for class OpenMM::CustomNonbondedForce::FunctionInfo Generating XML output for class OpenMM::GayBerneForce Generating XML output for class OpenMM::GBSAOBCForce Generating XML output for class OpenMM::ATMForce::GlobalParameterInfo Generating XML output for class OpenMM::CustomAngleForce::GlobalParameterInfo Generating XML output for class OpenMM::CustomBondForce::GlobalParameterInfo Generating XML output for class OpenMM::CustomCentroidBondForce::GlobalParameterInfo Generating XML output for class OpenMM::CustomCompoundBondForce::GlobalParameterInfo Generating XML output for class OpenMM::CustomCVForce::GlobalParameterInfo Generating XML output for class OpenMM::CustomExternalForce::GlobalParameterInfo Generating XML output for class OpenMM::CustomGBForce::GlobalParameterInfo Generating XML output for class OpenMM::CustomHbondForce::GlobalParameterInfo Generating XML output for class OpenMM::CustomManyParticleForce::GlobalParameterInfo Generating XML output for class OpenMM::CustomNonbondedForce::GlobalParameterInfo Generating XML output for class OpenMM::CustomTorsionForce::GlobalParameterInfo Generating XML output for class OpenMM::NonbondedForce::GlobalParameterInfo Generating XML output for class OpenMM::CustomCentroidBondForce::GroupInfo Generating XML output for class OpenMM::CustomHbondForce::GroupInfo Generating XML output for class OpenMM::HarmonicAngleForce Generating XML output for class OpenMM::HarmonicBondForce Generating XML output for class OpenMM::HippoNonbondedForce Generating XML output for class OpenMM::Integrator Generating XML output for class OpenMM::CustomNonbondedForce::InteractionGroupInfo Generating XML output for class OpenMM::LangevinIntegrator Generating XML output for class OpenMM::LangevinMiddleIntegrator Generating XML output for class OpenMM::LocalCoordinatesSite Generating XML output for class OpenMM::LocalEnergyMinimizer Generating XML output for class OpenMM::CMAPTorsionForce::MapInfo Generating XML output for class OpenMM::MinimizationReporter Generating XML output for class OpenMM::MonteCarloAnisotropicBarostat Generating XML output for class OpenMM::MonteCarloBarostat Generating XML output for class OpenMM::MonteCarloFlexibleBarostat Generating XML output for class OpenMM::MonteCarloMembraneBarostat Generating XML output for class OpenMM::AmoebaMultipoleForce::MultipoleInfo Generating XML output for class OpenMM::NonbondedForce Generating XML output for class OpenMM::NoseHooverChain Generating XML output for class OpenMM::NoseHooverIntegrator Generating XML output for class OpenMM::OpenMMException Generating XML output for class OpenMM::OutOfPlaneSite Generating XML output for class OpenMM::AmoebaGeneralizedKirkwoodForce::ParticleInfo Generating XML output for class OpenMM::ATMForce::ParticleInfo Generating XML output for class OpenMM::CustomExternalForce::ParticleInfo Generating XML output for class OpenMM::CustomGBForce::ParticleInfo Generating XML output for class OpenMM::CustomManyParticleForce::ParticleInfo Generating XML output for class OpenMM::CustomNonbondedForce::ParticleInfo Generating XML output for class OpenMM::DrudeForce::ParticleInfo Generating XML output for class OpenMM::GayBerneForce::ParticleInfo Generating XML output for class OpenMM::GBSAOBCForce::ParticleInfo Generating XML output for class OpenMM::HippoNonbondedForce::ParticleInfo Generating XML output for class OpenMM::NonbondedForce::ParticleInfo Generating XML output for class OpenMM::NonbondedForce::ParticleOffsetInfo Generating XML output for class OpenMM::CustomExternalForce::ParticleParameterInfo Generating XML output for class OpenMM::CustomManyParticleForce::ParticleParameterInfo Generating XML output for class OpenMM::AmoebaVdwForce::ParticleTypeInfo Generating XML output for class OpenMM::PeriodicTorsionForce Generating XML output for class OpenMM::PeriodicTorsionForce::PeriodicTorsionInfo Generating XML output for class OpenMM::CustomHbondForce::PerPairParameterInfo Generating XML output for class OpenMM::CustomGBForce::PerParticleParameterInfo Generating XML output for class OpenMM::CustomNonbondedForce::PerParticleParameterInfo Generating XML output for class OpenMM::Platform Generating XML output for class OpenMM/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include/openmm/serialization/SerializationNode.h:88: warning: The following parameter of OpenMM::SerializationNode::getChildNode(const std::string &name) const is not documented: parameter 'name' /build/reproducible-path/openmm-8.1.1+dfsg/serialization/include/openmm/serialization/SerializationNode.h:95: warning: The following parameter of OpenMM::SerializationNode::getChildNode(const std::string &name) is not documented: parameter 'name' ::RBTorsionForce Generating XML output for class OpenMM::RBTorsionForce::RBTorsionInfo Generating XML output for class OpenMM::RMSDForce Generating XML output for class OpenMM::RPMDIntegrator Generating XML output for class OpenMM::RPMDMonteCarloBarostat Generating XML output for class OpenMM::DrudeForce::ScreenedPairInfo Generating XML output for class OpenMM::SerializationNode Generating XML output for class OpenMM::SerializationProxy Generating XML output for class OpenMM::State Generating XML output for class OpenMM::State::StateBuilder Generating XML output for class OpenMM::System Generating XML output for class OpenMM::TabulatedFunction Generating XML output for class OpenMM::ThreeParticleAverageSite Generating XML output for class OpenMM::CustomTorsionForce::TorsionInfo Generating XML output for class OpenMM::CustomTorsionForce::TorsionParameterInfo Generating XML output for class OpenMM::AmoebaTorsionTorsionForce::TorsionTorsionGridInfo Generating XML output for class OpenMM::AmoebaTorsionTorsionForce::TorsionTorsionInfo Generating XML output for class OpenMM::TwoParticleAverageSite Generating XML output for class OpenMM::AmoebaVdwForce::TypePairInfo Generating XML output for class OpenMM::CustomCVForce::VariableInfo Generating XML output for class OpenMM::VariableLangevinIntegrator Generating XML output for class OpenMM::VariableVerletIntegrator Generating XML output for class OpenMM::AmoebaVdwForce::VdwInfo Generating XML output for class OpenMM::Vec3 Generating XML output for class OpenMM::VerletIntegrator Generating XML output for class OpenMM::VirtualSite Generating XML output for class OpenMM::AmoebaWcaDispersionForce::WcaDispersionInfo Generating XML output for class OpenMM::XmlSerializer Generating XML output for namespace OpenMM Generating XML output for namespace std Generating XML output for file Platform.h Generating XML output for file OpenMM.h Generating XML output for file AndersenThermostat.h Generating XML output for file ATMForce.h Generating XML output for file BrownianIntegrator.h Generating XML output for file CMAPTorsionForce.h Generating XML output for file CMMotionRemover.h Generating XML output for file CompoundIntegrator.h Generating XML output for file Context.h Generating XML output for file CustomAngleForce.h Generating XML output for file CustomBondForce.h Generating XML output for file CustomCentroidBondForce.h Generating XML output for file CustomCompoundBondForce.h Generating XML output for file CustomCVForce.h Generating XML output for file CustomExternalForce.h Generating XML output for file CustomGBForce.h Generating XML output for file CustomHbondForce.h Generating XML output for file CustomIntegrator.h Generating XML output for file CustomManyParticleForce.h Generating XML output for file CustomNonbondedForce.h Generating XML output for file CustomTorsionForce.h Generating XML output for file Force.h Generating XML output for file GayBerneForce.h Generating XML output for file GBSAOBCForce.h Generating XML output for file HarmonicAngleForce.h Generating XML output for file HarmonicBondForce.h Generating XML output for file Integrator.h Generating XML output for file LangevinIntegrator.h Generating XML output for file LangevinMiddleIntegrator.h Generating XML output for file LocalEnergyMinimizer.h Generating XML output for file MonteCarloAnisotropicBarostat.h Generating XML output for file MonteCarloBarostat.h Generating XML output for file MonteCarloFlexibleBarostat.h Generating XML output for file MonteCarloMembraneBarostat.h Generating XML output for file NonbondedForce.h Generating XML output for file NoseHooverChain.h Generating XML output for file NoseHooverIntegrator.h Generating XML output for file OpenMMException.h Generating XML output for file PeriodicTorsionForce.h Generating XML output for file RBTorsionForce.h Generating XML output for file RMSDForce.h Generating XML output for file State.h Generating XML output for file System.h Generating XML output for file TabulatedFunction.h Generating XML output for file Units.h Generating XML output for file VariableLangevinIntegrator.h Generating XML output for file VariableVerletIntegrator.h Generating XML output for file Vec3.h Generating XML output for file VerletIntegrator.h Generating XML output for file VirtualSite.h Generating XML output for file AmoebaGeneralizedKirkwoodForce.h Generating XML output for file AmoebaMultipoleForce.h Generating XML output for file AmoebaTorsionTorsionForce.h Generating XML output for file AmoebaVdwForce.h Generating XML output for file AmoebaWcaDispersionForce.h Generating XML output for file HippoNonbondedForce.h Generating XML output for file OpenMMAmoeba.h Generating XML output for file DrudeForce.h Generating XML output for file DrudeIntegrator.h Generating XML output for file DrudeLangevinIntegrator.h Generating XML output for file DrudeNoseHooverIntegrator.h Generating XML output for file DrudeSCFIntegrator.h Generating XML output for file OpenMMDrude.h Generating XML output for file RPMDIntegrator.h Generating XML output for file RPMDMonteCarloBarostat.h Generating XML output for file SerializationNode.h Generating XML output for file SerializationProxy.h Generating XML output for file XmlSerializer.h Generating XML output for page deprecated Generate XML output for dir /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/ Generate XML output for dir /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/ Generate XML output for dir /build/reproducible-path/openmm-8.1.1+dfsg/olla/include/ Generate XML output for dir /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/ Generate XML output for dir /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/ Generate XML output for dir /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include/ Generate XML output for dir /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/include/ Generate XML output for dir /build/reproducible-path/openmm-8.1.1+dfsg/serialization/include/ Generate XML output for dir /build/reproducible-path/openmm-8.1.1+dfsg/olla/ Generate XML output for dir /build/reproducible-path/openmm-8.1.1+dfsg/olla/include/openmm/ Generate XML output for dir /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/ Generate XML output for dir /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/ Generate XML output for dir /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include/openmm/ Generate XML output for dir /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/include/openmm/ Generate XML output for dir /build/reproducible-path/openmm-8.1.1+dfsg/serialization/include/openmm/ Generate XML output for dir /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/ Generate XML output for dir /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/ Generate XML output for dir /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/ Generate XML output for dir /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/ Generate XML output for dir /build/reproducible-path/openmm-8.1.1+dfsg/plugins/ Generate XML output for dir /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/ Generate XML output for dir /build/reproducible-path/openmm-8.1.1+dfsg/serialization/ Generate XML output for dir /build/reproducible-path/openmm-8.1.1+dfsg/serialization/include/openmm/serialization/ Running plantuml with JAVA... type lookup cache used 4851/65536 hits=27856 misses=5087 symbol lookup cache used 5057/65536 hits=48378 misses=5057 finished... [ 18%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/src/swig_doxygen/swigInputConfig.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/swigInputConfig.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/src/swig_doxygen/swigInputConfig.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/swigInputConfig.py [ 18%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/src/swig_doxygen/swigInputBuilder.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/swigInputBuilder.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/src/swig_doxygen/swigInputBuilder.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/swigInputBuilder.py [ 18%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/src/swig_doxygen/swig_lib/python/exceptions.i to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/swig_lib/python/exceptions.i cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/src/swig_doxygen/swig_lib/python/exceptions.i /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/swig_lib/python/exceptions.i [ 18%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/src/swig_doxygen/swig_lib/python/extend.i to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/swig_lib/python/extend.i cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/src/swig_doxygen/swig_lib/python/extend.i /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/swig_lib/python/extend.i [ 18%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/src/swig_doxygen/swig_lib/python/features.i to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/swig_lib/python/features.i cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/src/swig_doxygen/swig_lib/python/features.i /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/swig_lib/python/features.i [ 18%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/LangevinIntegrator.cpp.o [ 18%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/src/swig_doxygen/swig_lib/python/header.i to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/swig_lib/python/header.i /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/LangevinIntegrator.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/LangevinIntegrator.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/LangevinIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/LangevinIntegrator.cpp [ 18%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/LangevinMiddleIntegrator.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/src/swig_doxygen/swig_lib/python/header.i /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/swig_lib/python/header.i /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/LangevinMiddleIntegrator.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/LangevinMiddleIntegrator.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/LangevinMiddleIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/LangevinMiddleIntegrator.cpp [ 18%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/LocalEnergyMinimizer.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/LocalEnergyMinimizer.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/LocalEnergyMinimizer.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/LocalEnergyMinimizer.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/LocalEnergyMinimizer.cpp [ 18%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/src/swig_doxygen/swig_lib/python/pythoncode.i to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/swig_lib/python/pythoncode.i cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/src/swig_doxygen/swig_lib/python/pythoncode.i /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/swig_lib/python/pythoncode.i [ 20%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/Messages.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/Messages.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/Messages.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/Messages.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/Messages.cpp [ 20%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/testInstallation.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/testInstallation.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/testInstallation.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/testInstallation.py [ 20%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/unit/__init__.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/__init__.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/unit/__init__.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/__init__.py [ 20%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloAnisotropicBarostat.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloAnisotropicBarostat.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloAnisotropicBarostat.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloAnisotropicBarostat.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/MonteCarloAnisotropicBarostat.cpp [ 20%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/unit/basedimension.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/basedimension.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/unit/basedimension.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/basedimension.py [ 20%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/unit/baseunit.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/baseunit.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/unit/baseunit.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/baseunit.py [ 20%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloAnisotropicBarostatImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloAnisotropicBarostatImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloAnisotropicBarostatImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloAnisotropicBarostatImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/MonteCarloAnisotropicBarostatImpl.cpp [ 20%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloBarostat.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloBarostat.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloBarostat.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloBarostat.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/MonteCarloBarostat.cpp [ 20%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloBarostatImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloBarostatImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloBarostatImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloBarostatImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/MonteCarloBarostatImpl.cpp [ 20%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/unit/constants.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/constants.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/unit/constants.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/constants.py [ 20%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloFlexibleBarostat.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloFlexibleBarostat.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloFlexibleBarostat.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloFlexibleBarostat.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/MonteCarloFlexibleBarostat.cpp [ 20%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/unit/doctests.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/doctests.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/unit/doctests.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/doctests.py [ 20%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloFlexibleBarostatImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloFlexibleBarostatImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloFlexibleBarostatImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloFlexibleBarostatImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/MonteCarloFlexibleBarostatImpl.cpp [ 20%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloMembraneBarostat.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloMembraneBarostat.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloMembraneBarostat.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloMembraneBarostat.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/MonteCarloMembraneBarostat.cpp [ 20%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/unit/mymatrix.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/mymatrix.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/unit/mymatrix.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/mymatrix.py [ 20%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/unit/prefix.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/prefix.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/unit/prefix.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/prefix.py [ 20%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloMembraneBarostatImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloMembraneBarostatImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloMembraneBarostatImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloMembraneBarostatImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/MonteCarloMembraneBarostatImpl.cpp [ 20%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/unit/quantity.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/quantity.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/unit/quantity.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/quantity.py [ 20%] CMake-copying file 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/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/unit.py [ 20%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/unit/unit_definitions.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/unit_definitions.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/unit/unit_definitions.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/unit_definitions.py [ 20%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/unit/unit_math.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/unit_math.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/unit/unit_math.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/unit_math.py [ 20%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/unit/unit_operators.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/unit_operators.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/unit/unit_operators.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/unit_operators.py [ 20%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/vec3.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/vec3.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/vec3.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/vec3.py [ 20%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/NonbondedForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/NonbondedForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/NonbondedForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/NonbondedForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/NonbondedForce.cpp [ 20%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/simtk/__init__.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/simtk/__init__.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/simtk/__init__.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/simtk/__init__.py [ 20%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/simtk/openmm/__init__.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/simtk/openmm/__init__.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/simtk/openmm/__init__.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/simtk/openmm/__init__.py [ 20%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/NonbondedForceImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/NonbondedForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/NonbondedForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/NonbondedForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/NonbondedForceImpl.cpp [ 20%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/simtk/openmm/app/__init__.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/simtk/openmm/app/__init__.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/simtk/openmm/app/__init__.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/simtk/openmm/app/__init__.py [ 20%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/NoseHooverChain.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/NoseHooverChain.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/NoseHooverChain.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/NoseHooverChain.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/NoseHooverChain.cpp [ 22%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/simtk/unit/__init__.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/simtk/unit/__init__.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/simtk/unit/__init__.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/simtk/unit/__init__.py [ 22%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/NoseHooverIntegrator.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/NoseHooverIntegrator.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/NoseHooverIntegrator.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/NoseHooverIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/NoseHooverIntegrator.cpp [ 22%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/src/swig_doxygen/doxygen/buildXML.sh to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/doxygen/buildXML.sh cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/src/swig_doxygen/doxygen/buildXML.sh /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/doxygen/buildXML.sh [ 22%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/OSRngSeed.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/OSRngSeed.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/OSRngSeed.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/OSRngSeed.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/OSRngSeed.cpp [ 22%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/PeriodicTorsionForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/PeriodicTorsionForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/PeriodicTorsionForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/PeriodicTorsionForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/PeriodicTorsionForce.cpp [ 22%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestAPIUnits.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestAPIUnits.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestAPIUnits.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestAPIUnits.py [ 22%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestATMForce.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestATMForce.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestATMForce.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestATMForce.py [ 22%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestAmberInpcrdFile.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestAmberInpcrdFile.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestAmberInpcrdFile.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestAmberInpcrdFile.py [ 22%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestAmberPrmtopFile.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestAmberPrmtopFile.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestAmberPrmtopFile.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestAmberPrmtopFile.py [ 22%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestBytes.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestBytes.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestBytes.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestBytes.py [ 22%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/PeriodicTorsionForceImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/PeriodicTorsionForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/PeriodicTorsionForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/PeriodicTorsionForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/PeriodicTorsionForceImpl.cpp [ 22%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestCharmmFiles.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestCharmmFiles.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestCharmmFiles.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestCharmmFiles.py [ 22%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestCheckpointReporter.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestCheckpointReporter.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestCheckpointReporter.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestCheckpointReporter.py [ 22%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestDcdFile.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestDcdFile.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestDcdFile.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestDcdFile.py [ 22%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestDesmondDMSFile.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestDesmondDMSFile.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestDesmondDMSFile.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestDesmondDMSFile.py [ 22%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/RBTorsionForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/RBTorsionForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/RBTorsionForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/RBTorsionForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/RBTorsionForce.cpp [ 25%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestElement.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestElement.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestElement.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestElement.py [ 25%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestForceField.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestForceField.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestForceField.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestForceField.py [ 25%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestForceGroups.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestForceGroups.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestForceGroups.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestForceGroups.py [ 25%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestGenerators.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestGenerators.py [ 25%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/RBTorsionForceImpl.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestGenerators.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestGenerators.py /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/RBTorsionForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/RBTorsionForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/RBTorsionForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/RBTorsionForceImpl.cpp [ 25%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestGromacsGroFile.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestGromacsGroFile.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestGromacsGroFile.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestGromacsGroFile.py [ 25%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestGromacsTopFile.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestGromacsTopFile.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestGromacsTopFile.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestGromacsTopFile.py [ 25%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestIntegrators.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestIntegrators.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestIntegrators.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestIntegrators.py [ 25%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestMetadynamics.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestMetadynamics.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestMetadynamics.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestMetadynamics.py [ 25%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/RMSDForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/RMSDForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/RMSDForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/RMSDForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/RMSDForce.cpp [ 25%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestModeller.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestModeller.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestModeller.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestModeller.py [ 27%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/RMSDForceImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/RMSDForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/RMSDForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/RMSDForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/RMSDForceImpl.cpp [ 27%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestNumpyCompatibility.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestNumpyCompatibility.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestNumpyCompatibility.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestNumpyCompatibility.py [ 27%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestPatches.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestPatches.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestPatches.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestPatches.py [ 27%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestPdbFile.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestPdbFile.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestPdbFile.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestPdbFile.py [ 27%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestPdbReporter.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestPdbReporter.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestPdbReporter.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestPdbReporter.py [ 27%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestPdbxFile.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestPdbxFile.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestPdbxFile.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestPdbxFile.py [ 27%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestPickle.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestPickle.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestPickle.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestPickle.py [ 27%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestSimulatedTempering.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestSimulatedTempering.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestSimulatedTempering.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestSimulatedTempering.py [ 27%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/SplineFitter.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/SplineFitter.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/SplineFitter.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/SplineFitter.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/SplineFitter.cpp [ 27%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestSimulation.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestSimulation.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestSimulation.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestSimulation.py [ 27%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestStateDataReporter.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestStateDataReporter.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestStateDataReporter.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestStateDataReporter.py [ 27%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/State.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/State.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/State.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/State.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/State.cpp [ 27%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestSwigWrappers.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestSwigWrappers.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestSwigWrappers.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestSwigWrappers.py [ 27%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/System.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/System.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/System.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/System.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/System.cpp [ 29%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestTopology.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestTopology.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestTopology.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestTopology.py [ 29%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestUnitCell.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestUnitCell.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestUnitCell.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestUnitCell.py [ 29%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/TabulatedFunction.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/TabulatedFunction.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/TabulatedFunction.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/TabulatedFunction.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/TabulatedFunction.cpp [ 29%] CMake-copying file 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CMakeFiles/OpenMM.dir/openmmapi/src/ThreadPool.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include 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/build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/1ppt.top /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/1ppt.top [ 29%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/2ci2.pdb.gro to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/2ci2.pdb.gro cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/2ci2.pdb.gro /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/2ci2.pdb.gro [ 29%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/VariableLangevinIntegrator.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include 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CMakeFiles/OpenMM.dir/openmmapi/src/VariableLangevinIntegrator.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/VariableLangevinIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/VariableLangevinIntegrator.cpp [ 29%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/2ci2.pdb.top to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/2ci2.pdb.top cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/2ci2.pdb.top /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/2ci2.pdb.top [ 29%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/4TVP-dmj_wat-ion.psf to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/4TVP-dmj_wat-ion.psf cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/4TVP-dmj_wat-ion.psf /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/4TVP-dmj_wat-ion.psf [ 29%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/5dhfr_cube.pdb to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/5dhfr_cube.pdb cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/5dhfr_cube.pdb /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/5dhfr_cube.pdb [ 29%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/5dhfr_cube.psf to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/5dhfr_cube.psf cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/5dhfr_cube.psf /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/5dhfr_cube.psf [ 29%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/VariableVerletIntegrator.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/VariableVerletIntegrator.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/VariableVerletIntegrator.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/VariableVerletIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/VariableVerletIntegrator.cpp [ 29%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/VectorExpression.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 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CMakeFiles/OpenMM.dir/openmmapi/src/VectorExpression.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/VectorExpression.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/VectorExpression.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/VectorExpression.cpp [ 29%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/DNA_mbondi3.inpcrd to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/DNA_mbondi3.inpcrd cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/DNA_mbondi3.inpcrd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/DNA_mbondi3.inpcrd [ 29%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/DNA_mbondi3.prmtop to 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/build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/MoS2.psf /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/MoS2.psf [ 31%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/T4-lysozyme-L99A-p-xylene-implicit.pdb to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/T4-lysozyme-L99A-p-xylene-implicit.pdb cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/T4-lysozyme-L99A-p-xylene-implicit.pdb /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/T4-lysozyme-L99A-p-xylene-implicit.pdb [ 31%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/VerletIntegrator.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/VerletIntegrator.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/VerletIntegrator.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/VerletIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/VerletIntegrator.cpp [ 31%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/aidilnaaaaa.gro to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/aidilnaaaaa.gro cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/aidilnaaaaa.gro /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/aidilnaaaaa.gro [ 31%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/VirtualSite.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/VirtualSite.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/VirtualSite.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/VirtualSite.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/VirtualSite.cpp [ 31%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/aidilnaaaaa.top to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/aidilnaaaaa.top cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/aidilnaaaaa.top /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/aidilnaaaaa.top [ 31%] Building CXX object CMakeFiles/OpenMM.dir/olla/src/Kernel.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/olla/src/Kernel.cpp.o -MF CMakeFiles/OpenMM.dir/olla/src/Kernel.cpp.o.d -o CMakeFiles/OpenMM.dir/olla/src/Kernel.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/olla/src/Kernel.cpp [ 31%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ala-ala-ala-implicit-forces/GBn2_NoCutoff.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala-ala-ala-implicit-forces/GBn2_NoCutoff.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ala-ala-ala-implicit-forces/GBn2_NoCutoff.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala-ala-ala-implicit-forces/GBn2_NoCutoff.xml [ 31%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ala-ala-ala-implicit-forces/GBn_NoCutoff_Salt.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala-ala-ala-implicit-forces/GBn_NoCutoff_Salt.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ala-ala-ala-implicit-forces/GBn_NoCutoff_Salt.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala-ala-ala-implicit-forces/GBn_NoCutoff_Salt.xml [ 31%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ala-ala-ala-implicit-forces/HCT_NoCutoff.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala-ala-ala-implicit-forces/HCT_NoCutoff.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ala-ala-ala-implicit-forces/HCT_NoCutoff.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala-ala-ala-implicit-forces/HCT_NoCutoff.xml [ 31%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ala-ala-ala-implicit-forces/OBC1_NonPeriodic.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala-ala-ala-implicit-forces/OBC1_NonPeriodic.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ala-ala-ala-implicit-forces/OBC1_NonPeriodic.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala-ala-ala-implicit-forces/OBC1_NonPeriodic.xml [ 31%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ala-ala-ala-implicit-forces/OBC2_NonPeriodic_Salt.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala-ala-ala-implicit-forces/OBC2_NonPeriodic_Salt.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ala-ala-ala-implicit-forces/OBC2_NonPeriodic_Salt.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala-ala-ala-implicit-forces/OBC2_NonPeriodic_Salt.xml [ 31%] Building CXX object CMakeFiles/OpenMM.dir/olla/src/KernelImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/olla/src/KernelImpl.cpp.o -MF CMakeFiles/OpenMM.dir/olla/src/KernelImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/olla/src/KernelImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/olla/src/KernelImpl.cpp [ 31%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ala3_solv.parm7 to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala3_solv.parm7 cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ala3_solv.parm7 /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala3_solv.parm7 [ 31%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ala3_solv.crd to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala3_solv.crd [ 31%] Building CXX object CMakeFiles/OpenMM.dir/olla/src/Platform.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/olla/src/Platform.cpp.o -MF CMakeFiles/OpenMM.dir/olla/src/Platform.cpp.o.d -o CMakeFiles/OpenMM.dir/olla/src/Platform.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/olla/src/Platform.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ala3_solv.crd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala3_solv.crd [ 31%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ala3_solv_drude.crd to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala3_solv_drude.crd cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ala3_solv_drude.crd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala3_solv_drude.crd [ 31%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ala3_solv.psf to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala3_solv.psf cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ala3_solv.psf /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala3_solv.psf [ 31%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ala3_solv_drude.psf to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala3_solv_drude.psf cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ala3_solv_drude.psf /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala3_solv_drude.psf [ 31%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ala_ala_ala.crd to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala_ala_ala.crd cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ala_ala_ala.crd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala_ala_ala.crd [ 31%] Building CXX object CMakeFiles/OpenMM.dir/libraries/quern/src/quern.cpp.o [ 31%] Building CXX object CMakeFiles/OpenMM.dir/libraries/quern/src/quern_factorization.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/quern/src/quern_factorization.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/quern/src/quern_factorization.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/quern/src/quern_factorization.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/src/quern_factorization.cpp /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/quern/src/quern.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/quern/src/quern.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/quern/src/quern.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/src/quern.cpp [ 31%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ala_ala_ala.pdb to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala_ala_ala.pdb cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ala_ala_ala.pdb /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala_ala_ala.pdb [ 31%] Building CXX object CMakeFiles/OpenMM.dir/libraries/quern/src/quern_order.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/quern/src/quern_order.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/quern/src/quern_order.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/quern/src/quern_order.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/src/quern_order.cpp [ 31%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ala_ala_ala.psf to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala_ala_ala.psf cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ala_ala_ala.psf /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala_ala_ala.psf [ 33%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ala_ala_ala.vpsf to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala_ala_ala.vpsf cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ala_ala_ala.vpsf /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala_ala_ala.vpsf [ 33%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ala_ala_ala.xpsf to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala_ala_ala.xpsf cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ala_ala_ala.xpsf /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala_ala_ala.xpsf [ 33%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ala_ala_ala_drude.pdb to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala_ala_ala_drude.pdb cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ala_ala_ala_drude.pdb /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala_ala_ala_drude.pdb [ 33%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/alanine-dipeptide-amoeba-forces.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-amoeba-forces.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/alanine-dipeptide-amoeba-forces.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-amoeba-forces.xml [ 33%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/alanine-dipeptide-explicit-amber99SBILDN-tip3p.dms to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-explicit-amber99SBILDN-tip3p.dms cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/alanine-dipeptide-explicit-amber99SBILDN-tip3p.dms /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-explicit-amber99SBILDN-tip3p.dms [ 33%] Building CXX object CMakeFiles/OpenMM.dir/libraries/quern/src/quern_solver.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/quern/src/quern_solver.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/quern/src/quern_solver.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/quern/src/quern_solver.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/src/quern_solver.cpp [ 33%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/alanine-dipeptide-explicit.inpcrd to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-explicit.inpcrd cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/alanine-dipeptide-explicit.inpcrd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-explicit.inpcrd [ 33%] Building CXX object CMakeFiles/OpenMM.dir/libraries/lepton/src/CompiledExpression.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/lepton/src/CompiledExpression.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/lepton/src/CompiledExpression.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/lepton/src/CompiledExpression.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/src/CompiledExpression.cpp [ 33%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/alanine-dipeptide-explicit.pdb to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-explicit.pdb cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/alanine-dipeptide-explicit.pdb /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-explicit.pdb [ 33%] Building CXX object CMakeFiles/OpenMM.dir/libraries/lepton/src/CompiledVectorExpression.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/lepton/src/CompiledVectorExpression.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/lepton/src/CompiledVectorExpression.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/lepton/src/CompiledVectorExpression.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/src/CompiledVectorExpression.cpp [ 33%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/alanine-dipeptide-explicit.prmtop to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-explicit.prmtop cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/alanine-dipeptide-explicit.prmtop /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-explicit.prmtop [ 35%] Building CXX object CMakeFiles/OpenMM.dir/libraries/lepton/src/ExpressionProgram.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/lepton/src/ExpressionProgram.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/lepton/src/ExpressionProgram.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/lepton/src/ExpressionProgram.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/src/ExpressionProgram.cpp [ 35%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/alanine-dipeptide-implicit-forces/GBn2_NoCutoff.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-implicit-forces/GBn2_NoCutoff.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/alanine-dipeptide-implicit-forces/GBn2_NoCutoff.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-implicit-forces/GBn2_NoCutoff.xml [ 35%] Building CXX object CMakeFiles/OpenMM.dir/libraries/lepton/src/ExpressionTreeNode.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/lepton/src/ExpressionTreeNode.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/lepton/src/ExpressionTreeNode.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/lepton/src/ExpressionTreeNode.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/src/ExpressionTreeNode.cpp [ 35%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/alanine-dipeptide-implicit-forces/GBn_NoCutoff_Salt.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-implicit-forces/GBn_NoCutoff_Salt.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/alanine-dipeptide-implicit-forces/GBn_NoCutoff_Salt.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-implicit-forces/GBn_NoCutoff_Salt.xml [ 35%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/alanine-dipeptide-implicit-forces/HCT_NoCutoff.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-implicit-forces/HCT_NoCutoff.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/alanine-dipeptide-implicit-forces/HCT_NoCutoff.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-implicit-forces/HCT_NoCutoff.xml [ 35%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/alanine-dipeptide-implicit-forces/OBC1_NonPeriodic.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-implicit-forces/OBC1_NonPeriodic.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/alanine-dipeptide-implicit-forces/OBC1_NonPeriodic.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-implicit-forces/OBC1_NonPeriodic.xml [ 35%] Building CXX object CMakeFiles/OpenMM.dir/libraries/lepton/src/Operation.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/lepton/src/Operation.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/lepton/src/Operation.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/lepton/src/Operation.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/src/Operation.cpp [ 35%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/alanine-dipeptide-implicit-forces/OBC2_NonPeriodic_Salt.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-implicit-forces/OBC2_NonPeriodic_Salt.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/alanine-dipeptide-implicit-forces/OBC2_NonPeriodic_Salt.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-implicit-forces/OBC2_NonPeriodic_Salt.xml [ 35%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/alanine-dipeptide-implicit.inpcrd to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-implicit.inpcrd cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/alanine-dipeptide-implicit.inpcrd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-implicit.inpcrd [ 35%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/alanine-dipeptide-implicit.pdb to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-implicit.pdb cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/alanine-dipeptide-implicit.pdb /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-implicit.pdb [ 35%] Building CXX object CMakeFiles/OpenMM.dir/libraries/lepton/src/ParsedExpression.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/lepton/src/ParsedExpression.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/lepton/src/ParsedExpression.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/lepton/src/ParsedExpression.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/src/ParsedExpression.cpp [ 35%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/alanine-dipeptide-implicit.prmtop to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-implicit.prmtop cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/alanine-dipeptide-implicit.prmtop /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-implicit.prmtop [ 35%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/altlocs.pdb to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/altlocs.pdb cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/altlocs.pdb /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/altlocs.pdb [ 35%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/altlocs2.pdb to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/altlocs2.pdb cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/altlocs2.pdb /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/altlocs2.pdb [ 35%] Building CXX object CMakeFiles/OpenMM.dir/libraries/lepton/src/Parser.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/lepton/src/Parser.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/lepton/src/Parser.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/lepton/src/Parser.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/src/Parser.cpp [ 35%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/amber.ncrst to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/amber.ncrst cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/amber.ncrst /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/amber.ncrst [ 35%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/amoeba-ion-in-water.pdb to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/amoeba-ion-in-water.pdb cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/amoeba-ion-in-water.pdb /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/amoeba-ion-in-water.pdb [ 37%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/bcd-nabumetone_lig.dms to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/bcd-nabumetone_lig.dms [ 37%] Building CXX object CMakeFiles/OpenMM.dir/libraries/sfmt/src/SFMT.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DHAVE_SSE2=1 -MD -MT CMakeFiles/OpenMM.dir/libraries/sfmt/src/SFMT.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/sfmt/src/SFMT.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/sfmt/src/SFMT.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/src/SFMT.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/bcd-nabumetone_lig.dms /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/bcd-nabumetone_lig.dms [ 37%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/bcd-nabumetone_rcpt.dms to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/bcd-nabumetone_rcpt.dms cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/bcd-nabumetone_rcpt.dms /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/bcd-nabumetone_rcpt.dms [ 37%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/bnz.gro to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/bnz.gro cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/bnz.gro /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/bnz.gro [ 37%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/bnz.top to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/bnz.top cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/bnz.top /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/bnz.top [ 37%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/bpti.pdb to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/bpti.pdb cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/bpti.pdb /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/bpti.pdb [ 37%] Building CXX object CMakeFiles/OpenMM.dir/libraries/lbfgs/src/lbfgs.cpp.o [ 37%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/charmm-solvated/envi.str to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/charmm-solvated/envi.str cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/charmm-solvated/envi.str /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/charmm-solvated/envi.str /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/lbfgs/src/lbfgs.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/lbfgs/src/lbfgs.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/lbfgs/src/lbfgs.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/src/lbfgs.cpp [ 37%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/charmm-solvated/isa_wat.3_kcl.m14.psf to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/charmm-solvated/isa_wat.3_kcl.m14.psf cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/charmm-solvated/isa_wat.3_kcl.m14.psf /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/charmm-solvated/isa_wat.3_kcl.m14.psf [ 37%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/charmm-solvated/m14.prm to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/charmm-solvated/m14.prm cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/charmm-solvated/m14.prm /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/charmm-solvated/m14.prm [ 37%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/charmm-solvated/m14.rtf to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/charmm-solvated/m14.rtf cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/charmm-solvated/m14.rtf /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/charmm-solvated/m14.rtf [ 37%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/charmm22.par to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/charmm22.par cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/charmm22.par /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/charmm22.par [ 37%] Building CXX object CMakeFiles/OpenMM.dir/libraries/hilbert/src/hilbert.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/hilbert/src/hilbert.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/hilbert/src/hilbert.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/hilbert/src/hilbert.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/src/hilbert.cpp [ 37%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/charmm22.rtf to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/charmm22.rtf cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/charmm22.rtf /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/charmm22.rtf [ 37%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/chl1.crd to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/chl1.crd cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/chl1.crd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/chl1.crd [ 37%] Building CXX object CMakeFiles/OpenMM.dir/libraries/csha1/src/SHA1.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/csha1/src/SHA1.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/csha1/src/SHA1.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/csha1/src/SHA1.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/src/SHA1.cpp [ 37%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/ReferenceKernelFactory.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/ReferenceKernelFactory.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/ReferenceKernelFactory.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/ReferenceKernelFactory.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/ReferenceKernelFactory.cpp [ 37%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/chl1.psf to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/chl1.psf cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/chl1.psf /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/chl1.psf [ 37%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/ReferenceKernels.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/ReferenceKernels.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/ReferenceKernels.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/ReferenceKernels.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/ReferenceKernels.cpp [ 37%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/chlb_cgenff.crd to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/chlb_cgenff.crd cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/chlb_cgenff.crd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/chlb_cgenff.crd [ 37%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/chlb_cgenff.psf to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/chlb_cgenff.psf [ 37%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/ReferencePlatform.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/chlb_cgenff.psf /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/chlb_cgenff.psf /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/ReferencePlatform.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/ReferencePlatform.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/ReferencePlatform.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/ReferencePlatform.cpp [ 37%] CMake-copying file 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-I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/ReferencePointFunctions.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/ReferencePointFunctions.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/ReferencePointFunctions.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/ReferencePointFunctions.cpp [ 39%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/cyt-gua-cyt.crd to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/cyt-gua-cyt.crd cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/cyt-gua-cyt.crd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/cyt-gua-cyt.crd [ 39%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/cyt-gua-cyt.psf to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/cyt-gua-cyt.psf cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/cyt-gua-cyt.psf /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/cyt-gua-cyt.psf [ 39%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/explicit.top to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/explicit.top cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/explicit.top /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/explicit.top [ 39%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ff14ipq.parm7 to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ff14ipq.parm7 cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ff14ipq.parm7 /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ff14ipq.parm7 [ 39%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/ReferenceTabulatedFunction.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/ReferenceTabulatedFunction.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/ReferenceTabulatedFunction.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/ReferenceTabulatedFunction.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/ReferenceTabulatedFunction.cpp [ 39%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ff14ipq.rst7 to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ff14ipq.rst7 cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ff14ipq.rst7 /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ff14ipq.rst7 [ 39%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ff_with_includes.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ff_with_includes.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ff_with_includes.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ff_with_includes.xml [ 39%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ObcParameters.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ObcParameters.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ObcParameters.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ObcParameters.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ObcParameters.cpp [ 39%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/formaldehyde.pdb to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/formaldehyde.pdb cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/formaldehyde.pdb /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/formaldehyde.pdb [ 39%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/gaffwat.parm7 to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/gaffwat.parm7 cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/gaffwat.parm7 /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/gaffwat.parm7 [ 39%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceAndersenThermostat.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceAndersenThermostat.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceAndersenThermostat.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceAndersenThermostat.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceAndersenThermostat.cpp [ 39%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/glycopeptide.pdb to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/glycopeptide.pdb cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/glycopeptide.pdb /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/glycopeptide.pdb [ 39%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/gpcr.cif to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/gpcr.cif cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/gpcr.cif /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/gpcr.cif [ 39%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/implicit.top to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/implicit.top cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/implicit.top /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/implicit.top [ 39%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/improper.psf to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/improper.psf cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/improper.psf /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/improper.psf [ 39%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/impropers_ordering_tetrapeptide.pdb to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/impropers_ordering_tetrapeptide.pdb cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/impropers_ordering_tetrapeptide.pdb /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/impropers_ordering_tetrapeptide.pdb [ 39%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceAngleBondIxn.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceAngleBondIxn.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceAngleBondIxn.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceAngleBondIxn.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceAngleBondIxn.cpp [ 39%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/insertions.pdbx to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/insertions.pdbx cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/insertions.pdbx /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/insertions.pdbx [ 39%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceBondForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit 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-I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceBondForce.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceBondForce.cpp.o.d -o 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-ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceBondIxn.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceBondIxn.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceBondIxn.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceBondIxn.cpp [ 39%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ionic.gro to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ionic.gro cd 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-fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCCMAAlgorithm.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCCMAAlgorithm.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCCMAAlgorithm.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceCCMAAlgorithm.cpp [ 43%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/opc3box.pdb to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/opc3box.pdb cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/opc3box.pdb /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/opc3box.pdb [ 43%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/opcbox.pdb to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/opcbox.pdb cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/opcbox.pdb /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/opcbox.pdb [ 43%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/par_all22_prot.inp to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/par_all22_prot.inp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/par_all22_prot.inp /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/par_all22_prot.inp [ 43%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCMAPTorsionIxn.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCMAPTorsionIxn.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCMAPTorsionIxn.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCMAPTorsionIxn.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceCMAPTorsionIxn.cpp [ 43%] CMake-copying file 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/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/par_all36_prot.prm /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/par_all36_prot.prm [ 43%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/peptide_with_tip4p.inpcrd to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/peptide_with_tip4p.inpcrd cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/peptide_with_tip4p.inpcrd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/peptide_with_tip4p.inpcrd [ 43%] CMake-copying file 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/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/test_amber_ff.xml [ 43%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceConstraints.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceConstraints.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceConstraints.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceConstraints.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceConstraints.cpp [ 43%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/tip4pew.top to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/tip4pew.top cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/tip4pew.top /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/tip4pew.top [ 43%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/tip5p.pdb to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/tip5p.pdb cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/tip5p.pdb /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/tip5p.pdb [ 43%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/top_all36_cgenff.rtf to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/top_all36_cgenff.rtf cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/top_all36_cgenff.rtf /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/top_all36_cgenff.rtf [ 45%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/toppar_all36_lipid_cholesterol.str to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/toppar_all36_lipid_cholesterol.str cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/toppar_all36_lipid_cholesterol.str /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/toppar_all36_lipid_cholesterol.str [ 45%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/toppar_drude_master_protein_2013e.str to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/toppar_drude_master_protein_2013e.str cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/toppar_drude_master_protein_2013e.str /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/toppar_drude_master_protein_2013e.str [ 45%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/toppar_drude_nucleic_acid_2017b.str to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/toppar_drude_nucleic_acid_2017b.str cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different 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cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/triclinic.gro /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/triclinic.gro [ 45%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/triclinic.pdb to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/triclinic.pdb cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/triclinic.pdb /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/triclinic.pdb [ 45%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomAngleIxn.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 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-I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomAngleIxn.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomAngleIxn.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomAngleIxn.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceCustomAngleIxn.cpp [ 45%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/triclinic.pdbx to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/triclinic.pdbx cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/triclinic.pdbx /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/triclinic.pdbx [ 45%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/tz2.truncoct.parm7 to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/tz2.truncoct.parm7 cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/tz2.truncoct.parm7 /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/tz2.truncoct.parm7 [ 45%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/tz2.truncoct.rst7 to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/tz2.truncoct.rst7 cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/tz2.truncoct.rst7 /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/tz2.truncoct.rst7 [ 45%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomBondIxn.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomBondIxn.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomBondIxn.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomBondIxn.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceCustomBondIxn.cpp [ 45%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/water-box-216.prmtop to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/water-box-216.prmtop cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/water-box-216.prmtop /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/water-box-216.prmtop [ 45%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/water_methanol.prm to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/water_methanol.prm cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/water_methanol.prm /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/water_methanol.prm [ 45%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/water_methanol.psf to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/water_methanol.psf cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/water_methanol.psf /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/water_methanol.psf [ 45%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/validateConstraints.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/validateConstraints.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/validateConstraints.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/validateConstraints.py [ 45%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/validateModeller.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/validateModeller.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/validateModeller.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/validateModeller.py [ 45%] Creating OpenMM Python swig input files... cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen && /usr/bin/python3 /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/swigInputBuilder.py -i /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python/src/swig_doxygen/doxygen/xml -c swigInputConfig.py -d OpenMM_docstring.i -o OpenMMSwigHeaders.i -a swig_lib/python/pythonprepend.i -z swig_lib/python/pythonappend.i -v 4.2.1 [ 45%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomCVForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomCVForce.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomCVForce.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomCVForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceCustomCVForce.cpp GayBerneForce.getCutoffDistance() returns unit.nanometers GayBerneForce.getSwitchingDistance() returns unit.nanometers GayBerneForce.getParticleParameters() returns sigma as unit.nanometer GayBerneForce.getParticleParameters() returns epsilon as unit.kilojoule_per_mole GayBerneForce.getParticleParameters() returns xparticle as None GayBerneForce.getParticleParameters() returns yparticle as None GayBerneForce.getParticleParameters() returns sx as unit.nanometer GayBerneForce.getParticleParameters() returns sy as unit.nanometer GayBerneForce.getParticleParameters() returns sz as unit.nanometer GayBerneForce.getParticleParameters() returns ex as None GayBerneForce.getParticleParameters() returns ey as None GayBerneForce.getParticleParameters() returns ez as None Integrator.getStepSize() returns unit.picosecond DrudeIntegrator.getDrudeTemperature() returns unit.kelvin DrudeIntegrator.getMaxDrudeDistance() returns unit.nanometer DrudeLangevinIntegrator.getTemperature() returns unit.kelvin DrudeLangevinIntegrator.getFriction() returns unit.picosecond**-1 DrudeLangevinIntegrator.getDrudeFriction() returns unit.picosecond**-1 DrudeLangevinIntegrator.computeSystemTemperature() returns unit.kelvin DrudeLangevinIntegrator.computeDrudeTemperature() returns unit.kelvin VariableLangevinIntegrator.getTemperature() returns unit.kelvin VariableLangevinIntegrator.getFriction() returns unit.picosecond**-1 VariableLangevinIntegrator.getMaximumStepSize() returns unit.picosecond CMAPTorsionForce.getMapParameters() returns size as None CMAPTorsionForce.getMapParameters() returns energy as unit.kilojoule_per_mole CustomNonbondedForce.getCutoffDistance() returns unit.nanometers CustomNonbondedForce.getSwitchingDistance() returns unit.nanometers PeriodicTorsionForce.getTorsionParameters() returns particle1 as None PeriodicTorsionForce.getTorsionParameters() returns particle2 as None PeriodicTorsionForce.getTorsionParameters() returns particle3 as None PeriodicTorsionForce.getTorsionParameters() returns particle4 as None PeriodicTorsionForce.getTorsionParameters() returns periodicity as None PeriodicTorsionForce.getTorsionParameters() returns phase as unit.radian PeriodicTorsionForce.getTorsionParameters() returns k as unit.kilojoule_per_mole DrudeSCFIntegrator.getMinimizationErrorTolerance() returns unit.kilojoules_per_mole/unit.nanometer BrownianIntegrator.getTemperature() returns unit.kelvin BrownianIntegrator.getFriction() returns unit.picosecond**-1 ATMForce.getParticleParameters() returns displacement1 as unit.nanometer ATMForce.getParticleParameters() returns displacement0 as unit.nanometer ATMForce.getPerturbationEnergy() returns unit.kilojoule_per_mole LocalCoordinatesSite.getLocalPosition() returns unit.nanometer Context.getTime() returns unit.picosecond CustomGBForce.getCutoffDistance() returns unit.nanometers AndersenThermostat.getDefaultTemperature() returns unit.kelvin AndersenThermostat.getDefaultCollisionFrequency() returns unit.picosecond**-1 HarmonicBondForce.getBondParameters() returns particle1 as None HarmonicBondForce.getBondParameters() returns particle2 as None HarmonicBondForce.getBondParameters() returns length as unit.nanometer HarmonicBondForce.getBondParameters() returns k as unit.kilojoule_per_mole/(unit.nanometer*unit.nanometer) HippoNonbondedForce.getCutoffDistance() returns unit.nanometers HippoNonbondedForce.getSwitchingDistance() returns unit.nanometers HippoNonbondedForce.getParticleParameters() returns charge as unit.elementary_charge HippoNonbondedForce.getParticleParameters() returns dipole as unit.elementary_charge*unit.nanometer HippoNonbondedForce.getParticleParameters() returns quadrupole as unit.elementary_charge*unit.nanometer**2 HippoNonbondedForce.getParticleParameters() returns coreCharge as unit.elementary_charge HippoNonbondedForce.getParticleParameters() returns alpha as None HippoNonbondedForce.getParticleParameters() returns epsilon as None HippoNonbondedForce.getParticleParameters() returns damping as None HippoNonbondedForce.getParticleParameters() returns c6 as None HippoNonbondedForce.getParticleParameters() returns pauliK as None HippoNonbondedForce.getParticleParameters() returns pauliQ as None HippoNonbondedForce.getParticleParameters() returns pauliAlpha as None HippoNonbondedForce.getParticleParameters() returns polarizability as None HippoNonbondedForce.getParticleParameters() returns axisType as None HippoNonbondedForce.getParticleParameters() returns multipoleAtomZ as None HippoNonbondedForce.getParticleParameters() returns multipoleAtomX as None HippoNonbondedForce.getParticleParameters() returns multipoleAtomY as None State.getTime() returns unit.picosecond State.getKineticEnergy() returns unit.kilojoules_per_mole State.getPotentialEnergy() returns unit.kilojoules_per_mole State.getPeriodicBoxVectors() returns unit.nanometers State.getPeriodicBoxVolume() returns unit.nanometers**3 HarmonicAngleForce.getAngleParameters() returns particle1 as None HarmonicAngleForce.getAngleParameters() returns particle2 as None HarmonicAngleForce.getAngleParameters() returns particle3 as None HarmonicAngleForce.getAngleParameters() returns angle as unit.radian HarmonicAngleForce.getAngleParameters() returns k as unit.kilojoule_per_mole/(unit.radian*unit.radian) RMSDForce.getReferencePositions() returns unit.nanometer LangevinIntegrator.getTemperature() returns unit.kelvin LangevinIntegrator.getFriction() returns unit.picosecond**-1 RPMDIntegrator.getTemperature() returns unit.kelvin RPMDIntegrator.getFriction() returns unit.picosecond**-1 RPMDIntegrator.getTotalEnergy() returns unit.kilojoules_per_mole MonteCarloMembraneBarostat.getDefaultPressure() returns unit.bar MonteCarloMembraneBarostat.getDefaultSurfaceTension() returns unit.bar*unit.nanometer MonteCarloMembraneBarostat.getDefaultTemperature() returns unit.kelvin RBTorsionForce.getTorsionParameters() returns particle1 as None RBTorsionForce.getTorsionParameters() returns particle2 as None RBTorsionForce.getTorsionParameters() returns particle3 as None RBTorsionForce.getTorsionParameters() returns particle4 as None RBTorsionForce.getTorsionParameters() returns c0 as unit.kilojoules_per_mole RBTorsionForce.getTorsionParameters() returns c1 as unit.kilojoules_per_mole RBTorsionForce.getTorsionParameters() returns c2 as unit.kilojoules_per_mole RBTorsionForce.getTorsionParameters() returns c3 as unit.kilojoules_per_mole RBTorsionForce.getTorsionParameters() returns c4 as unit.kilojoules_per_mole RBTorsionForce.getTorsionParameters() returns c5 as unit.kilojoules_per_mole DrudeForce.getParticleParameters() returns particle as None DrudeForce.getParticleParameters() returns particle1 as None DrudeForce.getParticleParameters() returns particle2 as None DrudeForce.getParticleParameters() returns particle3 as None DrudeForce.getParticleParameters() returns particle4 as None DrudeForce.getParticleParameters() returns charge as unit.elementary_charge DrudeForce.getParticleParameters() returns polarizability as unit.nanometer**3 DrudeForce.getParticleParameters() returns aniso12 as None DrudeForce.getParticleParameters() returns aniso34 as None AmoebaMultipoleForce.getCutoffDistance() returns unit.nanometer AmoebaMultipoleForce.getAEwald() returns 1/unit.nanometer AmoebaMultipoleForce.getMultipoleParameters() returns charge as unit.elementary_charge AmoebaMultipoleForce.getMultipoleParameters() returns molecularDipole as unit.elementary_charge*unit.nanometer AmoebaMultipoleForce.getMultipoleParameters() returns molecularQuadrupole as unit.elementary_charge*unit.nanometer**2 AmoebaMultipoleForce.getMultipoleParameters() returns axisType as None AmoebaMultipoleForce.getMultipoleParameters() returns multipoleAtomZ as None AmoebaMultipoleForce.getMultipoleParameters() returns multipoleAtomX as None AmoebaMultipoleForce.getMultipoleParameters() returns multipoleAtomY as None AmoebaMultipoleForce.getMultipoleParameters() returns thole as None AmoebaMultipoleForce.getMultipoleParameters() returns dampingFactor as None AmoebaMultipoleForce.getMultipoleParameters() returns polarity as unit.nanometer**3 AmoebaVdwForce.getParticleParameters() returns parentIndex as None AmoebaVdwForce.getParticleParameters() returns sigma as unit.nanometer AmoebaVdwForce.getParticleParameters() returns epsilon as unit.kilojoule_per_mole AmoebaVdwForce.getParticleParameters() returns reductionFactor as None AmoebaVdwForce.getParticleParameters() returns isAlchemical as None AmoebaVdwForce.getParticleParameters() returns typeIndex as None AmoebaVdwForce.getParticleTypeParameters() returns sigma as unit.nanometer AmoebaVdwForce.getParticleTypeParameters() returns epsilon as unit.kilojoule_per_mole AmoebaVdwForce.getTypePairParameters() returns type1 as None AmoebaVdwForce.getTypePairParameters() returns type2 as None AmoebaVdwForce.getTypePairParameters() returns sigma as unit.nanometer AmoebaVdwForce.getTypePairParameters() returns epsilon as unit.kilojoule_per_mole AmoebaVdwForce.getCutoffDistance() returns unit.nanometers AmoebaVdwForce.getCutoff() returns unit.nanometer NonbondedForce.getCutoffDistance() returns unit.nanometers NonbondedForce.getSwitchingDistance() returns unit.nanometers NonbondedForce.getPMEParameters() returns alpha as unit.nanometer**-1 NonbondedForce.getPMEParameters() returns nx as None NonbondedForce.getPMEParameters() returns ny as None NonbondedForce.getPMEParameters() returns nz as None NonbondedForce.getParticleParameters() returns charge as unit.elementary_charge NonbondedForce.getParticleParameters() returns sigma as unit.nanometer NonbondedForce.getParticleParameters() returns epsilon as unit.kilojoule_per_mole NonbondedForce.getExceptionParameters() returns particle1 as None NonbondedForce.getExceptionParameters() returns particle2 as None NonbondedForce.getExceptionParameters() returns chargeProd as unit.elementary_charge*unit.elementary_charge NonbondedForce.getExceptionParameters() returns sigma as unit.nanometer NonbondedForce.getExceptionParameters() returns epsilon as unit.kilojoule_per_mole MonteCarloBarostat.getDefaultPressure() returns unit.bar MonteCarloBarostat.getDefaultTemperature() returns unit.kelvin NoseHooverIntegrator.getTemperature() returns unit.kelvin NoseHooverIntegrator.getRelativeTemperature() returns unit.kelvin NoseHooverIntegrator.getCollisionFrequency() returns unit.picosecond**-1 NoseHooverIntegrator.getRelativeCollisionFrequency() returns unit.picosecond**-1 NoseHooverIntegrator.computeHeatBathEnergy() returns unit.kilojoules_per_mole NoseHooverIntegrator.getMaximumPairDistance() returns unit.nanometer DrudeNoseHooverIntegrator.getMaxDrudeDistance() returns unit.nanometer DrudeNoseHooverIntegrator.computeSystemTemperature() returns unit.kelvin DrudeNoseHooverIntegrator.computeDrudeTemperature() returns unit.kelvin VariableVerletIntegrator.getMaximumStepSize() returns unit.picosecond MonteCarloAnisotropicBarostat.getDefaultPressure() returns unit.bar MonteCarloAnisotropicBarostat.getDefaultTemperature() returns unit.kelvin GBSAOBCForce.getParticleParameters() returns charge as unit.elementary_charge GBSAOBCForce.getParticleParameters() returns radius as unit.nanometer GBSAOBCForce.getParticleParameters() returns scalingFactor as None GBSAOBCForce.getSurfaceAreaEnergy() returns unit.kilojoule_per_mole/unit.nanometer/unit.nanometer GBSAOBCForce.getCutoffDistance() returns unit.nanometers AmoebaGeneralizedKirkwoodForce.getParticleParameters() returns charge as unit.elementary_charge AmoebaGeneralizedKirkwoodForce.getParticleParameters() returns radius as unit.nanometer AmoebaGeneralizedKirkwoodForce.getParticleParameters() returns scalingFactor as None AmoebaGeneralizedKirkwoodForce.getProbeRadius() returns unit.nanometer AmoebaGeneralizedKirkwoodForce.getSurfaceAreaFactor() returns unit.kilojoule_per_mole/(unit.nanometer*unit.nanometer) CustomManyParticleForce.getCutoffDistance() returns unit.nanometers System.getParticleMass() returns unit.amu System.getConstraintParameters() returns particle1 as None System.getConstraintParameters() returns particle2 as None System.getConstraintParameters() returns distance as unit.nanometer System.getDefaultPeriodicBoxVectors() returns a as unit.nanometer System.getDefaultPeriodicBoxVectors() returns b as unit.nanometer System.getDefaultPeriodicBoxVectors() returns c as unit.nanometer AmoebaWcaDispersionForce.getParticleParameters() returns radius as unit.nanometer AmoebaWcaDispersionForce.getParticleParameters() returns epsilon as unit.kilojoule_per_mole AmoebaWcaDispersionForce.getEpso() returns unit.kilojoule_per_mole AmoebaWcaDispersionForce.getEpsh() returns unit.kilojoule_per_mole AmoebaWcaDispersionForce.getRmino() returns unit.nanometer AmoebaWcaDispersionForce.getRminh() returns unit.nanometer AmoebaWcaDispersionForce.getAwater() returns 1/(unit.nanometer*unit.nanometer*unit.nanometer) AmoebaWcaDispersionForce.getDispoff() returns unit.nanometer LangevinMiddleIntegrator.getTemperature() returns unit.kelvin LangevinMiddleIntegrator.getFriction() returns unit.picosecond**-1 MonteCarloFlexibleBarostat.getDefaultPressure() returns unit.bar MonteCarloFlexibleBarostat.getDefaultTemperature() returns unit.kelvin CustomHbondForce.getCutoffDistance() returns unit.nanometers RPMDMonteCarloBarostat.getDefaultPressure() returns unit.bar NoseHooverChain.getTemperature() returns unit.kelvin NoseHooverChain.getRelativeTemperature() returns unit.kelvin NoseHooverChain.getCollisionFrequency() returns unit.picosecond**-1 NoseHooverChain.getRelativeCollisionFrequency() returns unit.picosecond**-1 CompoundIntegrator.getStepSize() returns unit.picosecond [ 45%] Creating OpenMM Python module sources with swig... cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen && /usr/bin/swig -python -c++ -outdir /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm -o OpenMMSwig.cxx OpenMM.i [ 45%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomCentroidBondIxn.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomCentroidBondIxn.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomCentroidBondIxn.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomCentroidBondIxn.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceCustomCentroidBondIxn.cpp [ 45%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomCompoundBondIxn.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomCompoundBondIxn.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomCompoundBondIxn.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomCompoundBondIxn.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceCustomCompoundBondIxn.cpp [ 45%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomDynamics.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomDynamics.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomDynamics.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomDynamics.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceCustomDynamics.cpp OpenMMSwigHeaders.i:1951: Warning 314: 'None' is a python keyword, renaming to '_None' [ 45%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomExternalIxn.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomExternalIxn.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomExternalIxn.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomExternalIxn.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceCustomExternalIxn.cpp [ 45%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomGBIxn.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomGBIxn.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomGBIxn.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomGBIxn.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceCustomGBIxn.cpp [ 45%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomHbondIxn.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomHbondIxn.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomHbondIxn.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomHbondIxn.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceCustomHbondIxn.cpp [ 45%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomManyParticleIxn.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include 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-I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomTorsionIxn.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomTorsionIxn.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomTorsionIxn.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceCustomTorsionIxn.cpp [ 45%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceDynamics.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include 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-ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceDynamics.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceDynamics.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceDynamics.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceDynamics.cpp [ 45%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include 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-I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceLJCoulomb14.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceLJCoulomb14.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceLJCoulomb14.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceLJCoulomb14.cpp [ 47%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceGayBerneForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceGayBerneForce.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceGayBerneForce.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceGayBerneForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceGayBerneForce.cpp [ 47%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceLJCoulombIxn.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceLJCoulombIxn.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceLJCoulombIxn.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceLJCoulombIxn.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceLJCoulombIxn.cpp OpenMMSwigHeaders.i:525: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:584: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:664: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:747: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:839: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:867: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. [ 47%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceLangevinMiddleDynamics.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceLangevinMiddleDynamics.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceLangevinMiddleDynamics.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceLangevinMiddleDynamics.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceLangevinMiddleDynamics.cpp OpenMMSwigHeaders.i:933: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:937: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. [ 47%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceLincsAlgorithm.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceLincsAlgorithm.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceLincsAlgorithm.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceLincsAlgorithm.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceLincsAlgorithm.cpp OpenMMSwigHeaders.i:1043: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. [ 47%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceMonteCarloBarostat.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceMonteCarloBarostat.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceMonteCarloBarostat.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceMonteCarloBarostat.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceMonteCarloBarostat.cpp [ 47%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceNeighborList.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceNeighborList.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceNeighborList.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceNeighborList.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceNeighborList.cpp OpenMMSwigHeaders.i:1177: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:1223: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:1328: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. [ 47%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceNoseHooverChain.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceNoseHooverChain.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceNoseHooverChain.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceNoseHooverChain.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceNoseHooverChain.cpp [ 47%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceNoseHooverDynamics.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceNoseHooverDynamics.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceNoseHooverDynamics.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceNoseHooverDynamics.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceNoseHooverDynamics.cpp OpenMMSwigHeaders.i:1456: Warning 453: Can't apply (std::vector< Vec3,std::allocator< Vec3 > > &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:1459: Warning 453: Can't apply (std::vector< Vec3,std::allocator< Vec3 > > &OUTPUT). No typemaps are defined. [ 47%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceObc.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceObc.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceObc.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceObc.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceObc.cpp OpenMMSwigHeaders.i:1462: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:1517: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:1532: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:1547: Warning 453: Can't apply (OpenMM::SerializationNode &OUTPUT). No typemaps are defined. [ 47%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferencePME.cpp.o [ 47%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferencePairIxn.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferencePME.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferencePME.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferencePME.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferencePME.cpp /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferencePairIxn.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferencePairIxn.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferencePairIxn.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferencePairIxn.cpp OpenMMSwigHeaders.i:1659: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. [ 47%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceProperDihedralBond.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceProperDihedralBond.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceProperDihedralBond.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceProperDihedralBond.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceProperDihedralBond.cpp [ 47%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceRMSDForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceRMSDForce.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceRMSDForce.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceRMSDForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceRMSDForce.cpp OpenMMSwigHeaders.i:1702: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. [ 47%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceRbDihedralBond.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceRbDihedralBond.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceRbDihedralBond.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceRbDihedralBond.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceRbDihedralBond.cpp [ 47%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceSETTLEAlgorithm.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceSETTLEAlgorithm.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceSETTLEAlgorithm.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceSETTLEAlgorithm.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceSETTLEAlgorithm.cpp OpenMMSwigHeaders.i:1813: Warning 453: Can't apply (std::vector< Vec3,std::allocator< Vec3 > > &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:1816: Warning 453: Can't apply (std::vector< Vec3,std::allocator< Vec3 > > &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:1819: Warning 453: Can't apply (std::vector< Vec3,std::allocator< Vec3 > > &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:1825: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:1830: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. [ 47%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceStochasticDynamics.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceStochasticDynamics.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceStochasticDynamics.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceStochasticDynamics.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceStochasticDynamics.cpp [ 47%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceVariableStochasticDynamics.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceVariableStochasticDynamics.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceVariableStochasticDynamics.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceVariableStochasticDynamics.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceVariableStochasticDynamics.cpp OpenMMSwigHeaders.i:1879: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:1932: Warning 453: Can't apply (ContextImpl &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:1933: Warning 453: Can't apply (ContextImpl &OUTPUT). No typemaps are defined. [ 47%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceVariableVerletDynamics.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceVariableVerletDynamics.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceVariableVerletDynamics.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceVariableVerletDynamics.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceVariableVerletDynamics.cpp OpenMMSwigHeaders.i:2021: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. [ 47%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceVerletDynamics.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceVerletDynamics.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceVerletDynamics.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceVerletDynamics.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceVerletDynamics.cpp [ 50%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceVirtualSites.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceVirtualSites.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceVirtualSites.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceVirtualSites.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceVirtualSites.cpp [ 50%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/SimTKOpenMMUtilities.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/SimTKOpenMMUtilities.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/SimTKOpenMMUtilities.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/SimTKOpenMMUtilities.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/SimTKOpenMMUtilities.cpp OpenMMSwigHeaders.i:2155: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:2210: Warning 453: Can't apply (ContextImpl &OUTPUT). No typemaps are defined. [ 50%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/ATMForceProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/ATMForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/ATMForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/ATMForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/ATMForceProxy.cpp OpenMMSwigHeaders.i:2313: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. [ 50%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/AndersenThermostatProxy.cpp.o OpenMMSwigHeaders.i:2343: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/AndersenThermostatProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/AndersenThermostatProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/AndersenThermostatProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/AndersenThermostatProxy.cpp [ 50%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/BrownianIntegratorProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/BrownianIntegratorProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/BrownianIntegratorProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/BrownianIntegratorProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/BrownianIntegratorProxy.cpp OpenMMSwigHeaders.i:2416: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. [ 50%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/CMAPTorsionForceProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/CMAPTorsionForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/CMAPTorsionForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/CMAPTorsionForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/CMAPTorsionForceProxy.cpp OpenMMSwigHeaders.i:2490: Warning 453: Can't apply (std::vector< Vec3,std::allocator< Vec3 > > &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:2493: Warning 453: Can't apply (std::vector< Vec3,std::allocator< Vec3 > > &OUTPUT). No typemaps are defined. [ 50%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/CMMotionRemoverProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/CMMotionRemoverProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/CMMotionRemoverProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/CMMotionRemoverProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/CMMotionRemoverProxy.cpp [ 50%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/CompoundIntegratorProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/CompoundIntegratorProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/CompoundIntegratorProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/CompoundIntegratorProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/CompoundIntegratorProxy.cpp ./swig_lib/python/extend.i:414: Warning 509: Overloaded method OpenMM::CustomIntegrator::getPerDofVariable(int) const effectively ignored, OpenMMSwigHeaders.i:2491: Warning 509: as it is shadowed by OpenMM::CustomIntegrator::getPerDofVariable(int,std::vector< Vec3,std::allocator< Vec3 > > &) const. OpenMMSwigHeaders.i:2537: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. [ 50%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/CustomAngleForceProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/CustomAngleForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/CustomAngleForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/CustomAngleForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/CustomAngleForceProxy.cpp [ 50%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/CustomBondForceProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/CustomBondForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/CustomBondForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/CustomBondForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/CustomBondForceProxy.cpp OpenMMSwigHeaders.i:2677: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:2709: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:2714: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:2717: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. [ 50%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/CustomCVForceProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/CustomCVForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/CustomCVForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/CustomCVForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/CustomCVForceProxy.cpp OpenMMSwigHeaders.i:2770: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. [ 50%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/CustomCompoundBondForceProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/CustomCompoundBondForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/CustomCompoundBondForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/CustomCompoundBondForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/CustomCompoundBondForceProxy.cpp [ 50%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/CustomCentroidBondForceProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/CustomCentroidBondForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/CustomCentroidBondForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/CustomCentroidBondForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/CustomCentroidBondForceProxy.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 50%] Built target BuildModule [ 50%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/CustomExternalForceProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/CustomExternalForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/CustomExternalForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/CustomExternalForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/CustomExternalForceProxy.cpp [ 50%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/CustomGBForceProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 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-D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/CustomHbondForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/CustomHbondForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/CustomHbondForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/CustomHbondForceProxy.cpp [ 50%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/CustomIntegratorProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS 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-DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include 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-Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/HarmonicBondForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/HarmonicBondForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/HarmonicBondForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/HarmonicBondForceProxy.cpp [ 52%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/LangevinIntegratorProxy.cpp.o [ 52%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/LangevinMiddleIntegratorProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include 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-ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/MonteCarloMembraneBarostatProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/MonteCarloMembraneBarostatProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/MonteCarloMembraneBarostatProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/MonteCarloMembraneBarostatProxy.cpp [ 52%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/MonteCarloFlexibleBarostatProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include 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CMakeFiles/OpenMM.dir/serialization/src/MonteCarloFlexibleBarostatProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/MonteCarloFlexibleBarostatProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/MonteCarloFlexibleBarostatProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/MonteCarloFlexibleBarostatProxy.cpp [ 52%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/NonbondedForceProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/NonbondedForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/NonbondedForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/NonbondedForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/NonbondedForceProxy.cpp [ 52%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/NoseHooverIntegratorProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 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-I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/PeriodicTorsionForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/PeriodicTorsionForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/PeriodicTorsionForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/PeriodicTorsionForceProxy.cpp [ 52%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/RBTorsionForceProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 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-Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/RMSDForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/RMSDForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/RMSDForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/RMSDForceProxy.cpp [ 52%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/SerializationNode.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM 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-DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/SerializationNode.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/SerializationNode.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/SerializationNode.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/SerializationNode.cpp [ 52%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/SerializationProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include 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-DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/SerializationProxyRegistration.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/SerializationProxyRegistration.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/SerializationProxyRegistration.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/SerializationProxyRegistration.cpp [ 52%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/StateProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include 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-fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/StateProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/StateProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/StateProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/StateProxy.cpp [ 52%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/SystemProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 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-DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include 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-DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/VariableLangevinIntegratorProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/VariableLangevinIntegratorProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/VariableLangevinIntegratorProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/VariableLangevinIntegratorProxy.cpp [ 54%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/VariableVerletIntegratorProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include 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-ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/VariableVerletIntegratorProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/VariableVerletIntegratorProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/VariableVerletIntegratorProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/VariableVerletIntegratorProxy.cpp [ 54%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/XmlSerializer.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/XmlSerializer.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/XmlSerializer.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/XmlSerializer.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/XmlSerializer.cpp [ 54%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/VerletIntegratorProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include 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-I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/VerletIntegratorProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/VerletIntegratorProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/VerletIntegratorProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/VerletIntegratorProxy.cpp [ 54%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/dtoa.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include 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-Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/dtoa.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/dtoa.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/dtoa.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/dtoa.cpp [ 54%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/g_fmt.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/g_fmt.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/g_fmt.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/g_fmt.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/g_fmt.cpp [ 54%] Building CXX object CMakeFiles/OpenMM.dir/libraries/irrxml/src/irrXML.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/irrxml/src/irrXML.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/irrxml/src/irrXML.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/irrxml/src/irrXML.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/src/irrXML.cpp [ 54%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64assembler.cpp.o [ 54%] Building CXX object CMakeFiles/OpenMM.dir/libraries/vecmath/src/vecmath.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64assembler.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64assembler.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64assembler.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/arm/a64assembler.cpp /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/vecmath/src/vecmath.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/vecmath/src/vecmath.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/vecmath/src/vecmath.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/src/vecmath.cpp /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/dtoa.cpp: In function 'double strtod2(const char*, char**)': /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/dtoa.cpp:2650:46: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] 2650 | if (match(&s,"nf")) { | ^~~~ /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/dtoa.cpp:2652:55: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] 2652 | if (!match(&s,"inity")) | ^~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/dtoa.cpp:2661:47: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] 2661 | if (match(&s, "an")) { | ^~~~ /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/dtoa.cpp: In function 'char* dtoa(double, int, int, int*, int*, char**)': /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/dtoa.cpp:3725:42: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] 3725 | return nrv_alloc("Infinity", rve, 8); | ^~~~~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/dtoa.cpp:3727:34: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] 3727 | return nrv_alloc("NaN", rve, 3); | ^~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/dtoa.cpp:3735:34: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] 3735 | return nrv_alloc("0", rve, 1); | ^~~ [ 54%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64builder.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64builder.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64builder.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64builder.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/arm/a64builder.cpp [ 54%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64compiler.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64compiler.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64compiler.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64compiler.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/arm/a64compiler.cpp [ 54%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64emithelper.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64emithelper.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64emithelper.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64emithelper.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/arm/a64emithelper.cpp [ 54%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64formatter.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64formatter.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64formatter.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64formatter.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/arm/a64formatter.cpp [ 54%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64func.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include 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-I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64func.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64func.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64func.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/arm/a64func.cpp [ 54%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64instapi.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include 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-Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64instapi.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64instapi.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64instapi.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/arm/a64instapi.cpp [ 54%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64instdb.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include 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-I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64instdb.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64instdb.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64instdb.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/arm/a64instdb.cpp [ 54%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64operand.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64operand.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64operand.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64operand.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/arm/a64operand.cpp [ 54%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64rapass.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include 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-I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64rapass.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64rapass.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64rapass.cpp.o -c 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-I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/armformatter.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/armformatter.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/armformatter.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/arm/armformatter.cpp [ 56%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/archtraits.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include 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-I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/archtraits.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/archtraits.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/archtraits.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/archtraits.cpp [ 56%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/assembler.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include 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-Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/assembler.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/assembler.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/assembler.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/assembler.cpp [ 56%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/builder.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include 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-I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/builder.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/builder.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/builder.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/builder.cpp [ 56%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/codeholder.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/codeholder.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/codeholder.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/codeholder.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/codeholder.cpp [ 56%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/codewriter.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include 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-I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/codewriter.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/codewriter.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/codewriter.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/codewriter.cpp [ 56%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/compiler.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/compiler.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/compiler.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/compiler.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/compiler.cpp [ 56%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/constpool.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include 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-I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/constpool.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/constpool.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/constpool.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/constpool.cpp [ 56%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/cpuinfo.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include 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-Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/cpuinfo.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/cpuinfo.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/cpuinfo.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/cpuinfo.cpp [ 56%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/emithelper.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/emithelper.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/emithelper.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/emithelper.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/emithelper.cpp [ 56%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/emitter.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/emitter.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/emitter.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/emitter.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/emitter.cpp [ 56%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/emitterutils.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/emitterutils.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/emitterutils.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/emitterutils.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/emitterutils.cpp [ 56%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/environment.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/environment.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/environment.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/environment.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/environment.cpp [ 56%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/errorhandler.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/errorhandler.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/errorhandler.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/errorhandler.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/errorhandler.cpp [ 56%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/formatter.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/formatter.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/formatter.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/formatter.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/formatter.cpp [ 56%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/func.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include 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-Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/func.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/func.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/func.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/func.cpp [ 56%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/funcargscontext.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include 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CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/funcargscontext.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/funcargscontext.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/funcargscontext.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/funcargscontext.cpp [ 56%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/globals.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include 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-Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/globals.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/globals.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/globals.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/globals.cpp [ 56%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/inst.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/inst.cpp.o -MF 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-I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/jitallocator.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/jitallocator.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/jitallocator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/jitallocator.cpp [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/jitruntime.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/jitruntime.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/jitruntime.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/jitruntime.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/jitruntime.cpp [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/logger.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/logger.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/logger.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/logger.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/logger.cpp [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/operand.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/operand.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/operand.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/operand.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/operand.cpp [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/osutils.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/osutils.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/osutils.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/osutils.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/osutils.cpp [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/ralocal.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/ralocal.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/ralocal.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/ralocal.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/ralocal.cpp [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/rapass.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/rapass.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/rapass.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/rapass.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/rapass.cpp [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/rastack.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/rastack.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/rastack.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/rastack.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/rastack.cpp [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/string.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/string.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/string.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/string.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/string.cpp [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/support.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include 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-D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/support.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/support.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/support.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/support.cpp [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/target.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/target.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/target.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/target.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/target.cpp [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/type.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/type.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/type.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/type.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/type.cpp [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zone.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zone.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zone.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zone.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/zone.cpp [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/virtmem.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/virtmem.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/virtmem.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/virtmem.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/virtmem.cpp [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonehash.cpp.o [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonelist.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonehash.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonehash.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonehash.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/zonehash.cpp /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonelist.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonelist.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonelist.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/zonelist.cpp [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonestack.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include 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-I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonestack.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonestack.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonestack.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/zonestack.cpp [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonetree.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonetree.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonetree.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonetree.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/zonetree.cpp [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonevector.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include 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-I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonevector.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonevector.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonevector.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/zonevector.cpp [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86assembler.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include 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-Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86assembler.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86assembler.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86assembler.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/x86/x86assembler.cpp [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86compiler.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include 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-I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86compiler.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86compiler.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86compiler.cpp.o -c 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-I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86builder.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86builder.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86builder.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/x86/x86builder.cpp [ 60%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86emithelper.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86emithelper.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86emithelper.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86emithelper.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/x86/x86emithelper.cpp [ 60%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86formatter.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86formatter.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86formatter.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86formatter.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/x86/x86formatter.cpp [ 60%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86func.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86func.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86func.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86func.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/x86/x86func.cpp [ 60%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86instapi.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86instapi.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86instapi.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86instapi.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/x86/x86instapi.cpp [ 60%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86operand.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86operand.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86operand.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86operand.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/x86/x86operand.cpp [ 60%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86instdb.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86instdb.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86instdb.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86instdb.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/x86/x86instdb.cpp [ 60%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86rapass.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include 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CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zone.cpp.o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonehash.cpp.o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonelist.cpp.o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonestack.cpp.o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonetree.cpp.o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonevector.cpp.o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86assembler.cpp.o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86builder.cpp.o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86compiler.cpp.o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86emithelper.cpp.o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86formatter.cpp.o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86func.cpp.o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86instapi.cpp.o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86instdb.cpp.o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86operand.cpp.o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86rapass.cpp.o /usr/lib/x86_64-linux-gnu/libdl.a -lpthread /usr/bin/cmake -E cmake_symlink_library libOpenMM.so.8.1 libOpenMM.so.8.1 libOpenMM.so make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 60%] Built target OpenMM make -f platforms/reference/tests/CMakeFiles/TestReferenceATMForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceATMForce.dir/depend make -f platforms/reference/tests/CMakeFiles/TestReferenceAndersenThermostat.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceAndersenThermostat.dir/depend make -f platforms/reference/tests/CMakeFiles/TestReferenceBrownianIntegrator.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceBrownianIntegrator.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceATMForce.dir/DependInfo.cmake "--color=" make -f platforms/reference/tests/CMakeFiles/TestReferenceCMAPTorsionForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCMAPTorsionForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceAndersenThermostat.dir/DependInfo.cmake "--color=" make -f platforms/reference/tests/CMakeFiles/TestReferenceCMMotionRemover.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCMMotionRemover.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceBrownianIntegrator.dir/DependInfo.cmake "--color=" make -f platforms/reference/tests/CMakeFiles/TestReferenceCheckpoints.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCheckpoints.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceCMAPTorsionForce.dir/DependInfo.cmake "--color=" make -f platforms/reference/tests/CMakeFiles/TestReferenceCompoundIntegrator.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCompoundIntegrator.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceCMMotionRemover.dir/DependInfo.cmake "--color=" make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomAngleForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomAngleForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceCheckpoints.dir/DependInfo.cmake "--color=" make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomBondForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomBondForce.dir/depend make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceCompoundIntegrator.dir/DependInfo.cmake "--color=" make -f platforms/reference/tests/CMakeFiles/TestReferenceATMForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceATMForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceCustomAngleForce.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomCPPForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomCPPForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceCustomBondForce.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceAndersenThermostat.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceAndersenThermostat.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceBrownianIntegrator.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceBrownianIntegrator.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceCustomCPPForce.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomCVForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomCVForce.dir/depend make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceCMAPTorsionForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCMAPTorsionForce.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceCustomCVForce.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceCMMotionRemover.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCMMotionRemover.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceCheckpoints.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCheckpoints.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceATMForce.dir/TestReferenceATMForce.cpp.o make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceCompoundIntegrator.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCompoundIntegrator.dir/build cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceATMForce.dir/TestReferenceATMForce.cpp.o -MF CMakeFiles/TestReferenceATMForce.dir/TestReferenceATMForce.cpp.o.d -o CMakeFiles/TestReferenceATMForce.dir/TestReferenceATMForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceATMForce.cpp [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceAndersenThermostat.dir/TestReferenceAndersenThermostat.cpp.o [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceBrownianIntegrator.dir/TestReferenceBrownianIntegrator.cpp.o make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomAngleForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomAngleForce.dir/build cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceBrownianIntegrator.dir/TestReferenceBrownianIntegrator.cpp.o -MF CMakeFiles/TestReferenceBrownianIntegrator.dir/TestReferenceBrownianIntegrator.cpp.o.d -o CMakeFiles/TestReferenceBrownianIntegrator.dir/TestReferenceBrownianIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceBrownianIntegrator.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceAndersenThermostat.dir/TestReferenceAndersenThermostat.cpp.o -MF CMakeFiles/TestReferenceAndersenThermostat.dir/TestReferenceAndersenThermostat.cpp.o.d -o CMakeFiles/TestReferenceAndersenThermostat.dir/TestReferenceAndersenThermostat.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceAndersenThermostat.cpp make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomBondForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomBondForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomCPPForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomCPPForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceCMAPTorsionForce.dir/TestReferenceCMAPTorsionForce.cpp.o [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceCheckpoints.dir/TestReferenceCheckpoints.cpp.o make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomCentroidBondForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomCentroidBondForce.dir/depend make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceCMAPTorsionForce.dir/TestReferenceCMAPTorsionForce.cpp.o -MF CMakeFiles/TestReferenceCMAPTorsionForce.dir/TestReferenceCMAPTorsionForce.cpp.o.d -o CMakeFiles/TestReferenceCMAPTorsionForce.dir/TestReferenceCMAPTorsionForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceCMAPTorsionForce.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceCheckpoints.dir/TestReferenceCheckpoints.cpp.o -MF CMakeFiles/TestReferenceCheckpoints.dir/TestReferenceCheckpoints.cpp.o.d -o CMakeFiles/TestReferenceCheckpoints.dir/TestReferenceCheckpoints.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceCheckpoints.cpp [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceCMMotionRemover.dir/TestReferenceCMMotionRemover.cpp.o make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomCVForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomCVForce.dir/build cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceCMMotionRemover.dir/TestReferenceCMMotionRemover.cpp.o -MF CMakeFiles/TestReferenceCMMotionRemover.dir/TestReferenceCMMotionRemover.cpp.o.d -o CMakeFiles/TestReferenceCMMotionRemover.dir/TestReferenceCMMotionRemover.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceCMMotionRemover.cpp make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceCompoundIntegrator.dir/TestReferenceCompoundIntegrator.cpp.o make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomCompoundBondForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomCompoundBondForce.dir/depend [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceCustomAngleForce.dir/TestReferenceCustomAngleForce.cpp.o make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceCustomCentroidBondForce.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceCompoundIntegrator.dir/TestReferenceCompoundIntegrator.cpp.o -MF CMakeFiles/TestReferenceCompoundIntegrator.dir/TestReferenceCompoundIntegrator.cpp.o.d -o CMakeFiles/TestReferenceCompoundIntegrator.dir/TestReferenceCompoundIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceCompoundIntegrator.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceCustomAngleForce.dir/TestReferenceCustomAngleForce.cpp.o -MF CMakeFiles/TestReferenceCustomAngleForce.dir/TestReferenceCustomAngleForce.cpp.o.d -o CMakeFiles/TestReferenceCustomAngleForce.dir/TestReferenceCustomAngleForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceCustomAngleForce.cpp make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomExternalForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomExternalForce.dir/depend [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceCustomBondForce.dir/TestReferenceCustomBondForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceCustomBondForce.dir/TestReferenceCustomBondForce.cpp.o -MF CMakeFiles/TestReferenceCustomBondForce.dir/TestReferenceCustomBondForce.cpp.o.d -o CMakeFiles/TestReferenceCustomBondForce.dir/TestReferenceCustomBondForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceCustomBondForce.cpp make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceCustomCompoundBondForce.dir/DependInfo.cmake "--color=" make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomGBForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomGBForce.dir/depend make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomHbondForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomHbondForce.dir/depend [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceCustomCPPForce.dir/TestReferenceCustomCPPForce.cpp.o make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceCustomExternalForce.dir/DependInfo.cmake "--color=" [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceCustomCVForce.dir/TestReferenceCustomCVForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceCustomCVForce.dir/TestReferenceCustomCVForce.cpp.o -MF CMakeFiles/TestReferenceCustomCVForce.dir/TestReferenceCustomCVForce.cpp.o.d -o CMakeFiles/TestReferenceCustomCVForce.dir/TestReferenceCustomCVForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceCustomCVForce.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceCustomCPPForce.dir/TestReferenceCustomCPPForce.cpp.o -MF CMakeFiles/TestReferenceCustomCPPForce.dir/TestReferenceCustomCPPForce.cpp.o.d -o CMakeFiles/TestReferenceCustomCPPForce.dir/TestReferenceCustomCPPForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceCustomCPPForce.cpp make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomIntegrator.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomIntegrator.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceCustomGBForce.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceCustomHbondForce.dir/DependInfo.cmake "--color=" make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomManyParticleForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomManyParticleForce.dir/depend make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomCentroidBondForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomCentroidBondForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceCustomIntegrator.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomNonbondedForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomNonbondedForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceCustomManyParticleForce.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomCompoundBondForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomCompoundBondForce.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomExternalForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomExternalForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceCustomNonbondedForce.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomTorsionForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomTorsionForce.dir/depend make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomGBForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomGBForce.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceCustomCentroidBondForce.dir/TestReferenceCustomCentroidBondForce.cpp.o make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomHbondForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomHbondForce.dir/build cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceCustomCentroidBondForce.dir/TestReferenceCustomCentroidBondForce.cpp.o -MF CMakeFiles/TestReferenceCustomCentroidBondForce.dir/TestReferenceCustomCentroidBondForce.cpp.o.d -o CMakeFiles/TestReferenceCustomCentroidBondForce.dir/TestReferenceCustomCentroidBondForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceCustomCentroidBondForce.cpp make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceCustomTorsionForce.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomManyParticleForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomManyParticleForce.dir/build [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceCustomExternalForce.dir/TestReferenceCustomExternalForce.cpp.o make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomIntegrator.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomIntegrator.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceCustomExternalForce.dir/TestReferenceCustomExternalForce.cpp.o -MF CMakeFiles/TestReferenceCustomExternalForce.dir/TestReferenceCustomExternalForce.cpp.o.d -o CMakeFiles/TestReferenceCustomExternalForce.dir/TestReferenceCustomExternalForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceCustomExternalForce.cpp make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceCustomCompoundBondForce.dir/TestReferenceCustomCompoundBondForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceCustomCompoundBondForce.dir/TestReferenceCustomCompoundBondForce.cpp.o -MF CMakeFiles/TestReferenceCustomCompoundBondForce.dir/TestReferenceCustomCompoundBondForce.cpp.o.d -o CMakeFiles/TestReferenceCustomCompoundBondForce.dir/TestReferenceCustomCompoundBondForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceCustomCompoundBondForce.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomNonbondedForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomNonbondedForce.dir/build [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceCustomManyParticleForce.dir/TestReferenceCustomManyParticleForce.cpp.o [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceCustomHbondForce.dir/TestReferenceCustomHbondForce.cpp.o make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceCustomManyParticleForce.dir/TestReferenceCustomManyParticleForce.cpp.o -MF CMakeFiles/TestReferenceCustomManyParticleForce.dir/TestReferenceCustomManyParticleForce.cpp.o.d -o CMakeFiles/TestReferenceCustomManyParticleForce.dir/TestReferenceCustomManyParticleForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceCustomManyParticleForce.cpp make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceCustomGBForce.dir/TestReferenceCustomGBForce.cpp.o make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomTorsionForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomTorsionForce.dir/build cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceCustomGBForce.dir/TestReferenceCustomGBForce.cpp.o -MF CMakeFiles/TestReferenceCustomGBForce.dir/TestReferenceCustomGBForce.cpp.o.d -o CMakeFiles/TestReferenceCustomGBForce.dir/TestReferenceCustomGBForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceCustomGBForce.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceCustomHbondForce.dir/TestReferenceCustomHbondForce.cpp.o -MF CMakeFiles/TestReferenceCustomHbondForce.dir/TestReferenceCustomHbondForce.cpp.o.d -o CMakeFiles/TestReferenceCustomHbondForce.dir/TestReferenceCustomHbondForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceCustomHbondForce.cpp make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceCustomIntegrator.dir/TestReferenceCustomIntegrator.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceCustomIntegrator.dir/TestReferenceCustomIntegrator.cpp.o -MF CMakeFiles/TestReferenceCustomIntegrator.dir/TestReferenceCustomIntegrator.cpp.o.d -o CMakeFiles/TestReferenceCustomIntegrator.dir/TestReferenceCustomIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceCustomIntegrator.cpp [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceCustomTorsionForce.dir/TestReferenceCustomTorsionForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceCustomTorsionForce.dir/TestReferenceCustomTorsionForce.cpp.o -MF CMakeFiles/TestReferenceCustomTorsionForce.dir/TestReferenceCustomTorsionForce.cpp.o.d -o CMakeFiles/TestReferenceCustomTorsionForce.dir/TestReferenceCustomTorsionForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceCustomTorsionForce.cpp [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceCustomNonbondedForce.dir/TestReferenceCustomNonbondedForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceCustomNonbondedForce.dir/TestReferenceCustomNonbondedForce.cpp.o -MF CMakeFiles/TestReferenceCustomNonbondedForce.dir/TestReferenceCustomNonbondedForce.cpp.o.d -o CMakeFiles/TestReferenceCustomNonbondedForce.dir/TestReferenceCustomNonbondedForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceCustomNonbondedForce.cpp [ 60%] Linking CXX executable ../../../TestReferenceCustomCPPForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceCustomCPPForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceCustomCPPForce.dir/TestReferenceCustomCPPForce.cpp.o -o ../../../TestReferenceCustomCPPForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 60%] Built target TestReferenceCustomCPPForce make -f platforms/reference/tests/CMakeFiles/TestReferenceDispersionPME.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceDispersionPME.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceDispersionPME.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceDispersionPME.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceDispersionPME.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceDispersionPME.dir/TestReferenceDispersionPME.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceDispersionPME.dir/TestReferenceDispersionPME.cpp.o -MF CMakeFiles/TestReferenceDispersionPME.dir/TestReferenceDispersionPME.cpp.o.d -o CMakeFiles/TestReferenceDispersionPME.dir/TestReferenceDispersionPME.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceDispersionPME.cpp [ 60%] Linking CXX executable ../../../TestReferenceAndersenThermostat cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceAndersenThermostat.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceAndersenThermostat.dir/TestReferenceAndersenThermostat.cpp.o -o ../../../TestReferenceAndersenThermostat -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 60%] Built target TestReferenceAndersenThermostat make -f platforms/reference/tests/CMakeFiles/TestReferenceEwald.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceEwald.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceEwald.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceEwald.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceEwald.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceEwald.dir/TestReferenceEwald.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceEwald.dir/TestReferenceEwald.cpp.o -MF CMakeFiles/TestReferenceEwald.dir/TestReferenceEwald.cpp.o.d -o CMakeFiles/TestReferenceEwald.dir/TestReferenceEwald.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceEwald.cpp [ 60%] Linking CXX executable ../../../TestReferenceCMMotionRemover cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceCMMotionRemover.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceCMMotionRemover.dir/TestReferenceCMMotionRemover.cpp.o -o ../../../TestReferenceCMMotionRemover -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 60%] Built target TestReferenceCMMotionRemover make -f platforms/reference/tests/CMakeFiles/TestReferenceGBSAOBCForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceGBSAOBCForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceGBSAOBCForce.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceGBSAOBCForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceGBSAOBCForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceGBSAOBCForce.dir/TestReferenceGBSAOBCForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceGBSAOBCForce.dir/TestReferenceGBSAOBCForce.cpp.o -MF CMakeFiles/TestReferenceGBSAOBCForce.dir/TestReferenceGBSAOBCForce.cpp.o.d -o CMakeFiles/TestReferenceGBSAOBCForce.dir/TestReferenceGBSAOBCForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceGBSAOBCForce.cpp [ 62%] Linking CXX executable ../../../TestReferenceCheckpoints cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceCheckpoints.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceCheckpoints.dir/TestReferenceCheckpoints.cpp.o -o ../../../TestReferenceCheckpoints -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 62%] Built target TestReferenceCheckpoints make -f platforms/reference/tests/CMakeFiles/TestReferenceGayBerneForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceGayBerneForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceGayBerneForce.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceGayBerneForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceGayBerneForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 62%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceGayBerneForce.dir/TestReferenceGayBerneForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceGayBerneForce.dir/TestReferenceGayBerneForce.cpp.o -MF CMakeFiles/TestReferenceGayBerneForce.dir/TestReferenceGayBerneForce.cpp.o.d -o CMakeFiles/TestReferenceGayBerneForce.dir/TestReferenceGayBerneForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceGayBerneForce.cpp [ 62%] Linking CXX executable ../../../TestReferenceCMAPTorsionForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceCMAPTorsionForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceCMAPTorsionForce.dir/TestReferenceCMAPTorsionForce.cpp.o -o ../../../TestReferenceCMAPTorsionForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 62%] Built target TestReferenceCMAPTorsionForce make -f platforms/reference/tests/CMakeFiles/TestReferenceHarmonicAngleForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceHarmonicAngleForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceHarmonicAngleForce.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceHarmonicAngleForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceHarmonicAngleForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 62%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceHarmonicAngleForce.dir/TestReferenceHarmonicAngleForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceHarmonicAngleForce.dir/TestReferenceHarmonicAngleForce.cpp.o -MF CMakeFiles/TestReferenceHarmonicAngleForce.dir/TestReferenceHarmonicAngleForce.cpp.o.d -o CMakeFiles/TestReferenceHarmonicAngleForce.dir/TestReferenceHarmonicAngleForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceHarmonicAngleForce.cpp [ 62%] Linking CXX executable ../../../TestReferenceBrownianIntegrator cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceBrownianIntegrator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceBrownianIntegrator.dir/TestReferenceBrownianIntegrator.cpp.o -o ../../../TestReferenceBrownianIntegrator -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 62%] Built target TestReferenceBrownianIntegrator make -f platforms/reference/tests/CMakeFiles/TestReferenceHarmonicBondForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceHarmonicBondForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceHarmonicBondForce.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceHarmonicBondForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceHarmonicBondForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 62%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceHarmonicBondForce.dir/TestReferenceHarmonicBondForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceHarmonicBondForce.dir/TestReferenceHarmonicBondForce.cpp.o -MF CMakeFiles/TestReferenceHarmonicBondForce.dir/TestReferenceHarmonicBondForce.cpp.o.d -o CMakeFiles/TestReferenceHarmonicBondForce.dir/TestReferenceHarmonicBondForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceHarmonicBondForce.cpp [ 62%] Linking CXX executable ../../../TestReferenceCustomBondForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceCustomBondForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceCustomBondForce.dir/TestReferenceCustomBondForce.cpp.o -o ../../../TestReferenceCustomBondForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 62%] Linking CXX executable ../../../TestReferenceCustomAngleForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceCustomAngleForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceCustomAngleForce.dir/TestReferenceCustomAngleForce.cpp.o -o ../../../TestReferenceCustomAngleForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 62%] Built target TestReferenceCustomBondForce make -f platforms/reference/tests/CMakeFiles/TestReferenceKineticEnergy.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceKineticEnergy.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceKineticEnergy.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceKineticEnergy.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceKineticEnergy.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 62%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceKineticEnergy.dir/TestReferenceKineticEnergy.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceKineticEnergy.dir/TestReferenceKineticEnergy.cpp.o -MF CMakeFiles/TestReferenceKineticEnergy.dir/TestReferenceKineticEnergy.cpp.o.d -o CMakeFiles/TestReferenceKineticEnergy.dir/TestReferenceKineticEnergy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceKineticEnergy.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 62%] Built target TestReferenceCustomAngleForce make -f platforms/reference/tests/CMakeFiles/TestReferenceLangevinIntegrator.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceLangevinIntegrator.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceLangevinIntegrator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceLangevinIntegrator.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceLangevinIntegrator.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 62%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceLangevinIntegrator.dir/TestReferenceLangevinIntegrator.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceLangevinIntegrator.dir/TestReferenceLangevinIntegrator.cpp.o -MF CMakeFiles/TestReferenceLangevinIntegrator.dir/TestReferenceLangevinIntegrator.cpp.o.d -o CMakeFiles/TestReferenceLangevinIntegrator.dir/TestReferenceLangevinIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceLangevinIntegrator.cpp [ 62%] Linking CXX executable ../../../TestReferenceCompoundIntegrator cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceCompoundIntegrator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceCompoundIntegrator.dir/TestReferenceCompoundIntegrator.cpp.o -o ../../../TestReferenceCompoundIntegrator -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 62%] Linking CXX executable ../../../TestReferenceCustomExternalForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceCustomExternalForce.dir/link.txt --verbose=1 [ 62%] Linking CXX executable ../../../TestReferenceCustomTorsionForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceCustomTorsionForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceCustomExternalForce.dir/TestReferenceCustomExternalForce.cpp.o -o ../../../TestReferenceCustomExternalForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceCustomTorsionForce.dir/TestReferenceCustomTorsionForce.cpp.o -o ../../../TestReferenceCustomTorsionForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 62%] Built target TestReferenceCompoundIntegrator make -f platforms/reference/tests/CMakeFiles/TestReferenceLangevinMiddleIntegrator.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceLangevinMiddleIntegrator.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceLangevinMiddleIntegrator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceLangevinMiddleIntegrator.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceLangevinMiddleIntegrator.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 62%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceLangevinMiddleIntegrator.dir/TestReferenceLangevinMiddleIntegrator.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceLangevinMiddleIntegrator.dir/TestReferenceLangevinMiddleIntegrator.cpp.o -MF CMakeFiles/TestReferenceLangevinMiddleIntegrator.dir/TestReferenceLangevinMiddleIntegrator.cpp.o.d -o CMakeFiles/TestReferenceLangevinMiddleIntegrator.dir/TestReferenceLangevinMiddleIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceLangevinMiddleIntegrator.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 62%] Built target TestReferenceCustomExternalForce make -f platforms/reference/tests/CMakeFiles/TestReferenceLocalEnergyMinimizer.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceLocalEnergyMinimizer.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceLocalEnergyMinimizer.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceLocalEnergyMinimizer.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceLocalEnergyMinimizer.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 62%] Built target TestReferenceCustomTorsionForce make -f platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloAnisotropicBarostat.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloAnisotropicBarostat.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloAnisotropicBarostat.dir/DependInfo.cmake "--color=" [ 62%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceLocalEnergyMinimizer.dir/TestReferenceLocalEnergyMinimizer.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceLocalEnergyMinimizer.dir/TestReferenceLocalEnergyMinimizer.cpp.o -MF CMakeFiles/TestReferenceLocalEnergyMinimizer.dir/TestReferenceLocalEnergyMinimizer.cpp.o.d -o CMakeFiles/TestReferenceLocalEnergyMinimizer.dir/TestReferenceLocalEnergyMinimizer.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceLocalEnergyMinimizer.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloAnisotropicBarostat.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloAnisotropicBarostat.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 64%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloAnisotropicBarostat.dir/TestReferenceMonteCarloAnisotropicBarostat.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloAnisotropicBarostat.dir/TestReferenceMonteCarloAnisotropicBarostat.cpp.o -MF CMakeFiles/TestReferenceMonteCarloAnisotropicBarostat.dir/TestReferenceMonteCarloAnisotropicBarostat.cpp.o.d -o CMakeFiles/TestReferenceMonteCarloAnisotropicBarostat.dir/TestReferenceMonteCarloAnisotropicBarostat.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceMonteCarloAnisotropicBarostat.cpp [ 64%] Linking CXX executable ../../../TestReferenceCustomCompoundBondForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceCustomCompoundBondForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceCustomCompoundBondForce.dir/TestReferenceCustomCompoundBondForce.cpp.o -o ../../../TestReferenceCustomCompoundBondForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 64%] Linking CXX executable ../../../TestReferenceKineticEnergy cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceKineticEnergy.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceKineticEnergy.dir/TestReferenceKineticEnergy.cpp.o -o ../../../TestReferenceKineticEnergy -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 64%] Built target TestReferenceCustomCompoundBondForce make -f platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloBarostat.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloBarostat.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloBarostat.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloBarostat.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloBarostat.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 64%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloBarostat.dir/TestReferenceMonteCarloBarostat.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloBarostat.dir/TestReferenceMonteCarloBarostat.cpp.o -MF CMakeFiles/TestReferenceMonteCarloBarostat.dir/TestReferenceMonteCarloBarostat.cpp.o.d -o CMakeFiles/TestReferenceMonteCarloBarostat.dir/TestReferenceMonteCarloBarostat.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceMonteCarloBarostat.cpp [ 64%] Linking CXX executable ../../../TestReferenceCustomCVForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceCustomCVForce.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 64%] Built target TestReferenceKineticEnergy make -f platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloFlexibleBarostat.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloFlexibleBarostat.dir/depend /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceCustomCVForce.dir/TestReferenceCustomCVForce.cpp.o -o ../../../TestReferenceCustomCVForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloFlexibleBarostat.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloFlexibleBarostat.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloFlexibleBarostat.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 64%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloFlexibleBarostat.dir/TestReferenceMonteCarloFlexibleBarostat.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloFlexibleBarostat.dir/TestReferenceMonteCarloFlexibleBarostat.cpp.o -MF CMakeFiles/TestReferenceMonteCarloFlexibleBarostat.dir/TestReferenceMonteCarloFlexibleBarostat.cpp.o.d -o CMakeFiles/TestReferenceMonteCarloFlexibleBarostat.dir/TestReferenceMonteCarloFlexibleBarostat.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceMonteCarloFlexibleBarostat.cpp [ 64%] Linking CXX executable ../../../TestReferenceCustomCentroidBondForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceCustomCentroidBondForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceCustomCentroidBondForce.dir/TestReferenceCustomCentroidBondForce.cpp.o -o ../../../TestReferenceCustomCentroidBondForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 64%] Linking CXX executable ../../../TestReferenceHarmonicAngleForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceHarmonicAngleForce.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceHarmonicAngleForce.dir/TestReferenceHarmonicAngleForce.cpp.o -o ../../../TestReferenceHarmonicAngleForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 64%] Built target TestReferenceCustomCVForce make -f platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloMembraneBarostat.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloMembraneBarostat.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloMembraneBarostat.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloMembraneBarostat.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloMembraneBarostat.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 64%] Linking CXX executable ../../../TestReferenceGBSAOBCForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceGBSAOBCForce.dir/link.txt --verbose=1 [ 64%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloMembraneBarostat.dir/TestReferenceMonteCarloMembraneBarostat.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloMembraneBarostat.dir/TestReferenceMonteCarloMembraneBarostat.cpp.o -MF CMakeFiles/TestReferenceMonteCarloMembraneBarostat.dir/TestReferenceMonteCarloMembraneBarostat.cpp.o.d -o CMakeFiles/TestReferenceMonteCarloMembraneBarostat.dir/TestReferenceMonteCarloMembraneBarostat.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceMonteCarloMembraneBarostat.cpp /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceGBSAOBCForce.dir/TestReferenceGBSAOBCForce.cpp.o -o ../../../TestReferenceGBSAOBCForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 64%] Built target TestReferenceCustomCentroidBondForce make -f platforms/reference/tests/CMakeFiles/TestReferenceNeighborList.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceNeighborList.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceNeighborList.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceNeighborList.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceNeighborList.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 64%] Built target TestReferenceHarmonicAngleForce make -f platforms/reference/tests/CMakeFiles/TestReferenceNonbondedForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceNonbondedForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceNonbondedForce.dir/DependInfo.cmake "--color=" [ 64%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceNeighborList.dir/TestReferenceNeighborList.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceNeighborList.dir/TestReferenceNeighborList.cpp.o -MF CMakeFiles/TestReferenceNeighborList.dir/TestReferenceNeighborList.cpp.o.d -o CMakeFiles/TestReferenceNeighborList.dir/TestReferenceNeighborList.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceNeighborList.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceNonbondedForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceNonbondedForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 64%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceNonbondedForce.dir/TestReferenceNonbondedForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceNonbondedForce.dir/TestReferenceNonbondedForce.cpp.o -MF CMakeFiles/TestReferenceNonbondedForce.dir/TestReferenceNonbondedForce.cpp.o.d -o CMakeFiles/TestReferenceNonbondedForce.dir/TestReferenceNonbondedForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceNonbondedForce.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 64%] Built target TestReferenceGBSAOBCForce make -f platforms/reference/tests/CMakeFiles/TestReferenceNoseHooverIntegrator.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceNoseHooverIntegrator.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceNoseHooverIntegrator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceNoseHooverIntegrator.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceNoseHooverIntegrator.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 64%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceNoseHooverIntegrator.dir/TestReferenceNoseHooverIntegrator.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceNoseHooverIntegrator.dir/TestReferenceNoseHooverIntegrator.cpp.o -MF CMakeFiles/TestReferenceNoseHooverIntegrator.dir/TestReferenceNoseHooverIntegrator.cpp.o.d -o CMakeFiles/TestReferenceNoseHooverIntegrator.dir/TestReferenceNoseHooverIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceNoseHooverIntegrator.cpp [ 66%] Linking CXX executable ../../../TestReferenceCustomHbondForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceCustomHbondForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceCustomHbondForce.dir/TestReferenceCustomHbondForce.cpp.o -o ../../../TestReferenceCustomHbondForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 66%] Linking CXX executable ../../../TestReferenceCustomManyParticleForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceCustomManyParticleForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceCustomManyParticleForce.dir/TestReferenceCustomManyParticleForce.cpp.o -o ../../../TestReferenceCustomManyParticleForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 66%] Linking CXX executable ../../../TestReferenceGayBerneForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceGayBerneForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceGayBerneForce.dir/TestReferenceGayBerneForce.cpp.o -o ../../../TestReferenceGayBerneForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 66%] Built target TestReferenceCustomManyParticleForce make -f platforms/reference/tests/CMakeFiles/TestReferencePeriodicTorsionForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferencePeriodicTorsionForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferencePeriodicTorsionForce.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferencePeriodicTorsionForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferencePeriodicTorsionForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 66%] Built target TestReferenceCustomHbondForce make -f platforms/reference/tests/CMakeFiles/TestReferenceRBTorsionForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceRBTorsionForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceRBTorsionForce.dir/DependInfo.cmake "--color=" [ 66%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferencePeriodicTorsionForce.dir/TestReferencePeriodicTorsionForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferencePeriodicTorsionForce.dir/TestReferencePeriodicTorsionForce.cpp.o -MF CMakeFiles/TestReferencePeriodicTorsionForce.dir/TestReferencePeriodicTorsionForce.cpp.o.d -o CMakeFiles/TestReferencePeriodicTorsionForce.dir/TestReferencePeriodicTorsionForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferencePeriodicTorsionForce.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceRBTorsionForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceRBTorsionForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 66%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceRBTorsionForce.dir/TestReferenceRBTorsionForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceRBTorsionForce.dir/TestReferenceRBTorsionForce.cpp.o -MF CMakeFiles/TestReferenceRBTorsionForce.dir/TestReferenceRBTorsionForce.cpp.o.d -o CMakeFiles/TestReferenceRBTorsionForce.dir/TestReferenceRBTorsionForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceRBTorsionForce.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 66%] Built target TestReferenceGayBerneForce make -f platforms/reference/tests/CMakeFiles/TestReferenceRMSDForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceRMSDForce.dir/depend [ 66%] Linking CXX executable ../../../TestReferenceHarmonicBondForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceHarmonicBondForce.dir/link.txt --verbose=1 make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceRMSDForce.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceRMSDForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceRMSDForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceHarmonicBondForce.dir/TestReferenceHarmonicBondForce.cpp.o -o ../../../TestReferenceHarmonicBondForce -Wl,-rpath,"\$ORIGIN:" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 66%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceRMSDForce.dir/TestReferenceRMSDForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceRMSDForce.dir/TestReferenceRMSDForce.cpp.o -MF CMakeFiles/TestReferenceRMSDForce.dir/TestReferenceRMSDForce.cpp.o.d -o CMakeFiles/TestReferenceRMSDForce.dir/TestReferenceRMSDForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceRMSDForce.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 66%] Built target TestReferenceHarmonicBondForce make -f platforms/reference/tests/CMakeFiles/TestReferenceRandom.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceRandom.dir/depend [ 66%] Linking CXX executable ../../../TestReferenceLangevinIntegrator cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceLangevinIntegrator.dir/link.txt --verbose=1 make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceRandom.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceRandom.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceRandom.dir/build /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceLangevinIntegrator.dir/TestReferenceLangevinIntegrator.cpp.o -o ../../../TestReferenceLangevinIntegrator -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 68%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceRandom.dir/TestReferenceRandom.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceRandom.dir/TestReferenceRandom.cpp.o -MF CMakeFiles/TestReferenceRandom.dir/TestReferenceRandom.cpp.o.d -o CMakeFiles/TestReferenceRandom.dir/TestReferenceRandom.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceRandom.cpp [ 68%] Linking CXX executable ../../../TestReferenceATMForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceATMForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceATMForce.dir/TestReferenceATMForce.cpp.o -o ../../../TestReferenceATMForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 68%] Built target TestReferenceLangevinIntegrator make -f platforms/reference/tests/CMakeFiles/TestReferenceSettle.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceSettle.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceSettle.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceSettle.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceSettle.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 68%] Linking CXX executable ../../../TestReferenceNeighborList cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceNeighborList.dir/link.txt --verbose=1 [ 68%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceSettle.dir/TestReferenceSettle.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceSettle.dir/TestReferenceSettle.cpp.o -MF CMakeFiles/TestReferenceSettle.dir/TestReferenceSettle.cpp.o.d -o CMakeFiles/TestReferenceSettle.dir/TestReferenceSettle.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceSettle.cpp /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceNeighborList.dir/TestReferenceNeighborList.cpp.o -o ../../../TestReferenceNeighborList -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 68%] Linking CXX executable ../../../TestReferenceMonteCarloAnisotropicBarostat cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceMonteCarloAnisotropicBarostat.dir/link.txt --verbose=1 [ 68%] Built target TestReferenceATMForce make -f platforms/reference/tests/CMakeFiles/TestReferenceVariableLangevinIntegrator.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceVariableLangevinIntegrator.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceVariableLangevinIntegrator.dir/DependInfo.cmake "--color=" /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceMonteCarloAnisotropicBarostat.dir/TestReferenceMonteCarloAnisotropicBarostat.cpp.o -o ../../../TestReferenceMonteCarloAnisotropicBarostat -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceVariableLangevinIntegrator.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceVariableLangevinIntegrator.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 68%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceVariableLangevinIntegrator.dir/TestReferenceVariableLangevinIntegrator.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceVariableLangevinIntegrator.dir/TestReferenceVariableLangevinIntegrator.cpp.o -MF CMakeFiles/TestReferenceVariableLangevinIntegrator.dir/TestReferenceVariableLangevinIntegrator.cpp.o.d -o CMakeFiles/TestReferenceVariableLangevinIntegrator.dir/TestReferenceVariableLangevinIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceVariableLangevinIntegrator.cpp [ 68%] Built target TestReferenceNeighborList make -f platforms/reference/tests/CMakeFiles/TestReferenceVariableVerletIntegrator.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceVariableVerletIntegrator.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceVariableVerletIntegrator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceVariableVerletIntegrator.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceVariableVerletIntegrator.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 68%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceVariableVerletIntegrator.dir/TestReferenceVariableVerletIntegrator.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceVariableVerletIntegrator.dir/TestReferenceVariableVerletIntegrator.cpp.o -MF CMakeFiles/TestReferenceVariableVerletIntegrator.dir/TestReferenceVariableVerletIntegrator.cpp.o.d -o CMakeFiles/TestReferenceVariableVerletIntegrator.dir/TestReferenceVariableVerletIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceVariableVerletIntegrator.cpp [ 68%] Linking CXX executable ../../../TestReferenceMonteCarloFlexibleBarostat cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceMonteCarloFlexibleBarostat.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceMonteCarloFlexibleBarostat.dir/TestReferenceMonteCarloFlexibleBarostat.cpp.o -o ../../../TestReferenceMonteCarloFlexibleBarostat -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 68%] Built target TestReferenceMonteCarloAnisotropicBarostat make -f platforms/reference/tests/CMakeFiles/TestReferenceVerletIntegrator.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceVerletIntegrator.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceVerletIntegrator.dir/DependInfo.cmake "--color=" [ 68%] Linking CXX executable ../../../TestReferenceMonteCarloMembraneBarostat cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceMonteCarloMembraneBarostat.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceVerletIntegrator.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceVerletIntegrator.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceMonteCarloMembraneBarostat.dir/TestReferenceMonteCarloMembraneBarostat.cpp.o -o ../../../TestReferenceMonteCarloMembraneBarostat -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 68%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceVerletIntegrator.dir/TestReferenceVerletIntegrator.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceVerletIntegrator.dir/TestReferenceVerletIntegrator.cpp.o -MF CMakeFiles/TestReferenceVerletIntegrator.dir/TestReferenceVerletIntegrator.cpp.o.d -o CMakeFiles/TestReferenceVerletIntegrator.dir/TestReferenceVerletIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceVerletIntegrator.cpp [ 68%] Linking CXX executable ../../../TestReferenceCustomGBForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceCustomGBForce.dir/link.txt --verbose=1 [ 68%] Linking CXX executable ../../../TestReferenceLangevinMiddleIntegrator cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceLangevinMiddleIntegrator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceCustomGBForce.dir/TestReferenceCustomGBForce.cpp.o -o ../../../TestReferenceCustomGBForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceLangevinMiddleIntegrator.dir/TestReferenceLangevinMiddleIntegrator.cpp.o -o ../../../TestReferenceLangevinMiddleIntegrator -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 68%] Built target TestReferenceMonteCarloMembraneBarostat make -f platforms/reference/tests/CMakeFiles/TestReferenceVirtualSites.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceVirtualSites.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceVirtualSites.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceVirtualSites.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceVirtualSites.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 68%] Built target TestReferenceMonteCarloFlexibleBarostat make -f platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/build.make platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 68%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceVirtualSites.dir/TestReferenceVirtualSites.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceVirtualSites.dir/TestReferenceVirtualSites.cpp.o -MF CMakeFiles/TestReferenceVirtualSites.dir/TestReferenceVirtualSites.cpp.o.d -o CMakeFiles/TestReferenceVirtualSites.dir/TestReferenceVirtualSites.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceVirtualSites.cpp [ 68%] Generating ../src/OpenCLKernelSources.cpp, ../src/OpenCLKernelSources.h cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/cmake -D KERNEL_SOURCE_DIR=/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -D KERNELS_CPP=/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src/OpenCLKernelSources.cpp -D KERNELS_H=/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src/OpenCLKernelSources.h -D KERNEL_SOURCE_CLASS=OpenCLKernelSources -D KERNEL_FILE_EXTENSION=cl -P /build/reproducible-path/openmm-8.1.1+dfsg/cmake_modules/EncodeKernelFiles.cmake [ 68%] Built target TestReferenceCustomGBForce make -f platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/build.make platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/sharedTarget /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/build.make platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 68%] Built target TestReferenceLangevinMiddleIntegrator make -f plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/build.make plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/DependInfo.cmake "--color=" [ 68%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuBondForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/sharedTarget /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuBondForce.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuBondForce.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuBondForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src/CpuBondForce.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/build.make plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/build.make platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 68%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaGeneralizedKirkwoodForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaGeneralizedKirkwoodForce.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaGeneralizedKirkwoodForce.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaGeneralizedKirkwoodForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/src/AmoebaGeneralizedKirkwoodForce.cpp [ 68%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLArray.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLArray.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLArray.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLArray.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src/OpenCLArray.cpp [ 68%] Linking CXX executable ../../../TestReferenceMonteCarloBarostat cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceMonteCarloBarostat.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceMonteCarloBarostat.dir/TestReferenceMonteCarloBarostat.cpp.o -o ../../../TestReferenceMonteCarloBarostat -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 68%] Built target TestReferenceMonteCarloBarostat make -f plugins/rpmd/CMakeFiles/OpenMMRPMD.dir/build.make plugins/rpmd/CMakeFiles/OpenMMRPMD.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/CMakeFiles/OpenMMRPMD.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/rpmd/CMakeFiles/OpenMMRPMD.dir/build.make plugins/rpmd/CMakeFiles/OpenMMRPMD.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 68%] Building CXX object plugins/rpmd/CMakeFiles/OpenMMRPMD.dir/openmmapi/src/RPMDIntegrator.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMRPMD_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_RPMD_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/rpmd/CMakeFiles/OpenMMRPMD.dir/openmmapi/src/RPMDIntegrator.cpp.o -MF CMakeFiles/OpenMMRPMD.dir/openmmapi/src/RPMDIntegrator.cpp.o.d -o CMakeFiles/OpenMMRPMD.dir/openmmapi/src/RPMDIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/src/RPMDIntegrator.cpp [ 68%] Linking CXX executable ../../../TestReferenceRandom cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceRandom.dir/link.txt --verbose=1 [ 68%] Linking CXX executable ../../../TestReferenceLocalEnergyMinimizer cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceLocalEnergyMinimizer.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceLocalEnergyMinimizer.dir/TestReferenceLocalEnergyMinimizer.cpp.o -o ../../../TestReferenceLocalEnergyMinimizer -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceRandom.dir/TestReferenceRandom.cpp.o -o ../../../TestReferenceRandom -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 68%] Linking CXX executable ../../../TestReferenceSettle cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceSettle.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceSettle.dir/TestReferenceSettle.cpp.o -o ../../../TestReferenceSettle -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 68%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaGeneralizedKirkwoodForceImpl.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaGeneralizedKirkwoodForceImpl.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaGeneralizedKirkwoodForceImpl.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaGeneralizedKirkwoodForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/src/AmoebaGeneralizedKirkwoodForceImpl.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 68%] Built target TestReferenceLocalEnergyMinimizer make -f plugins/drude/CMakeFiles/OpenMMDrude.dir/build.make plugins/drude/CMakeFiles/OpenMMDrude.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/CMakeFiles/OpenMMDrude.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/drude/CMakeFiles/OpenMMDrude.dir/build.make plugins/drude/CMakeFiles/OpenMMDrude.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 68%] Building CXX object plugins/drude/CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMDrude_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_DRUDE_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/drude/CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeForce.cpp.o -MF CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeForce.cpp.o.d -o CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/src/DrudeForce.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 68%] Built target TestReferenceRandom make -f plugins/cpupme/CMakeFiles/OpenMMPME.dir/build.make plugins/cpupme/CMakeFiles/OpenMMPME.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/plugins/cpupme /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/cpupme /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/cpupme/CMakeFiles/OpenMMPME.dir/DependInfo.cmake "--color=" [ 68%] Built target TestReferenceSettle make -f serialization/tests/CMakeFiles/TestSerializationNode.dir/build.make serialization/tests/CMakeFiles/TestSerializationNode.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializationNode.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/cpupme/CMakeFiles/OpenMMPME.dir/build.make plugins/cpupme/CMakeFiles/OpenMMPME.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializationNode.dir/build.make serialization/tests/CMakeFiles/TestSerializationNode.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 68%] Building CXX object plugins/cpupme/CMakeFiles/OpenMMPME.dir/src/CpuPmeKernelFactory.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/cpupme && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMPME_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/cpupme/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/cpupme/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/include/pocketfft -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_PME_BUILDING_SHARED_LIBRARY -msse4.1 -MD -MT plugins/cpupme/CMakeFiles/OpenMMPME.dir/src/CpuPmeKernelFactory.cpp.o -MF CMakeFiles/OpenMMPME.dir/src/CpuPmeKernelFactory.cpp.o.d -o CMakeFiles/OpenMMPME.dir/src/CpuPmeKernelFactory.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/cpupme/src/CpuPmeKernelFactory.cpp [ 68%] Building CXX object serialization/tests/CMakeFiles/TestSerializationNode.dir/TestSerializationNode.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializationNode.dir/TestSerializationNode.cpp.o -MF CMakeFiles/TestSerializationNode.dir/TestSerializationNode.cpp.o.d -o CMakeFiles/TestSerializationNode.dir/TestSerializationNode.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializationNode.cpp [ 68%] Linking CXX executable ../../../TestReferenceRMSDForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceRMSDForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceRMSDForce.dir/TestReferenceRMSDForce.cpp.o -o ../../../TestReferenceRMSDForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 68%] Linking CXX executable ../../../TestReferenceCustomIntegrator cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceCustomIntegrator.dir/link.txt --verbose=1 [ 68%] Linking CXX executable ../../../TestReferencePeriodicTorsionForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferencePeriodicTorsionForce.dir/link.txt --verbose=1 [ 68%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomGBForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomGBForce.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomGBForce.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomGBForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src/CpuCustomGBForce.cpp /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceCustomIntegrator.dir/TestReferenceCustomIntegrator.cpp.o -o ../../../TestReferenceCustomIntegrator -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferencePeriodicTorsionForce.dir/TestReferencePeriodicTorsionForce.cpp.o -o ../../../TestReferencePeriodicTorsionForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 68%] Built target TestReferenceRMSDForce make -f serialization/tests/CMakeFiles/TestSerializeATMForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeATMForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeATMForce.dir/DependInfo.cmake "--color=" [ 68%] Linking CXX executable ../../../TestReferenceRBTorsionForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceRBTorsionForce.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeATMForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeATMForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceRBTorsionForce.dir/TestReferenceRBTorsionForce.cpp.o -o ../../../TestReferenceRBTorsionForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 68%] Building CXX object serialization/tests/CMakeFiles/TestSerializeATMForce.dir/TestSerializeATMForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeATMForce.dir/TestSerializeATMForce.cpp.o -MF CMakeFiles/TestSerializeATMForce.dir/TestSerializeATMForce.cpp.o.d -o CMakeFiles/TestSerializeATMForce.dir/TestSerializeATMForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeATMForce.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 68%] Linking CXX executable ../../../TestReferenceVariableLangevinIntegrator cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceVariableLangevinIntegrator.dir/link.txt --verbose=1 [ 68%] Built target TestReferencePeriodicTorsionForce make -f serialization/tests/CMakeFiles/TestSerializeAndersenThermostat.dir/build.make serialization/tests/CMakeFiles/TestSerializeAndersenThermostat.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeAndersenThermostat.dir/DependInfo.cmake "--color=" /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceVariableLangevinIntegrator.dir/TestReferenceVariableLangevinIntegrator.cpp.o -o ../../../TestReferenceVariableLangevinIntegrator -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeAndersenThermostat.dir/build.make serialization/tests/CMakeFiles/TestSerializeAndersenThermostat.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 68%] Built target TestReferenceCustomIntegrator make -f serialization/tests/CMakeFiles/TestSerializeCMAPTorsion.dir/build.make serialization/tests/CMakeFiles/TestSerializeCMAPTorsion.dir/depend [ 68%] Building CXX object serialization/tests/CMakeFiles/TestSerializeAndersenThermostat.dir/TestSerializeAndersenThermostat.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeAndersenThermostat.dir/TestSerializeAndersenThermostat.cpp.o -MF CMakeFiles/TestSerializeAndersenThermostat.dir/TestSerializeAndersenThermostat.cpp.o.d -o CMakeFiles/TestSerializeAndersenThermostat.dir/TestSerializeAndersenThermostat.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeAndersenThermostat.cpp make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeCMAPTorsion.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeCMAPTorsion.dir/build.make serialization/tests/CMakeFiles/TestSerializeCMAPTorsion.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 68%] Built target TestReferenceRBTorsionForce make -f serialization/tests/CMakeFiles/TestSerializeCMMotionRemover.dir/build.make serialization/tests/CMakeFiles/TestSerializeCMMotionRemover.dir/depend [ 68%] Building CXX object serialization/tests/CMakeFiles/TestSerializeCMAPTorsion.dir/TestSerializeCMAPTorsion.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeCMAPTorsion.dir/TestSerializeCMAPTorsion.cpp.o -MF CMakeFiles/TestSerializeCMAPTorsion.dir/TestSerializeCMAPTorsion.cpp.o.d -o CMakeFiles/TestSerializeCMAPTorsion.dir/TestSerializeCMAPTorsion.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeCMAPTorsion.cpp make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeCMMotionRemover.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 68%] Built target TestReferenceVariableLangevinIntegrator make -f serialization/tests/CMakeFiles/TestSerializeCustomAngleForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomAngleForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeCustomAngleForce.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeCMMotionRemover.dir/build.make serialization/tests/CMakeFiles/TestSerializeCMMotionRemover.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeCustomAngleForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomAngleForce.dir/build [ 68%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaMultipoleForce.cpp.o make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaMultipoleForce.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaMultipoleForce.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaMultipoleForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/src/AmoebaMultipoleForce.cpp [ 68%] Building CXX object serialization/tests/CMakeFiles/TestSerializeCMMotionRemover.dir/TestSerializeCMMotionRemover.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeCMMotionRemover.dir/TestSerializeCMMotionRemover.cpp.o -MF CMakeFiles/TestSerializeCMMotionRemover.dir/TestSerializeCMMotionRemover.cpp.o.d -o CMakeFiles/TestSerializeCMMotionRemover.dir/TestSerializeCMMotionRemover.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeCMMotionRemover.cpp [ 68%] Building CXX object serialization/tests/CMakeFiles/TestSerializeCustomAngleForce.dir/TestSerializeCustomAngleForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeCustomAngleForce.dir/TestSerializeCustomAngleForce.cpp.o -MF CMakeFiles/TestSerializeCustomAngleForce.dir/TestSerializeCustomAngleForce.cpp.o.d -o CMakeFiles/TestSerializeCustomAngleForce.dir/TestSerializeCustomAngleForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeCustomAngleForce.cpp [ 68%] Building CXX object plugins/drude/CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeForceImpl.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMDrude_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_DRUDE_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/drude/CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeForceImpl.cpp.o -MF CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeForceImpl.cpp.o.d -o CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/src/DrudeForceImpl.cpp [ 68%] Linking CXX executable ../../TestSerializationNode cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializationNode.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializationNode.dir/TestSerializationNode.cpp.o -o ../../TestSerializationNode -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 70%] Building CXX object plugins/rpmd/CMakeFiles/OpenMMRPMD.dir/openmmapi/src/RPMDMonteCarloBarostat.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMRPMD_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_RPMD_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/rpmd/CMakeFiles/OpenMMRPMD.dir/openmmapi/src/RPMDMonteCarloBarostat.cpp.o -MF CMakeFiles/OpenMMRPMD.dir/openmmapi/src/RPMDMonteCarloBarostat.cpp.o.d -o CMakeFiles/OpenMMRPMD.dir/openmmapi/src/RPMDMonteCarloBarostat.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/src/RPMDMonteCarloBarostat.cpp [ 70%] Linking CXX executable ../../../TestReferenceCustomNonbondedForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceCustomNonbondedForce.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 70%] Built target TestSerializationNode /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceCustomNonbondedForce.dir/TestReferenceCustomNonbondedForce.cpp.o -o ../../../TestReferenceCustomNonbondedForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make -f serialization/tests/CMakeFiles/TestSerializeCustomBondForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomBondForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeCustomBondForce.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeCustomBondForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomBondForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 70%] Building CXX object serialization/tests/CMakeFiles/TestSerializeCustomBondForce.dir/TestSerializeCustomBondForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeCustomBondForce.dir/TestSerializeCustomBondForce.cpp.o -MF CMakeFiles/TestSerializeCustomBondForce.dir/TestSerializeCustomBondForce.cpp.o.d -o CMakeFiles/TestSerializeCustomBondForce.dir/TestSerializeCustomBondForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeCustomBondForce.cpp [ 70%] Linking CXX executable ../../TestSerializeCMMotionRemover cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeCMMotionRemover.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeCMMotionRemover.dir/TestSerializeCMMotionRemover.cpp.o -o ../../TestSerializeCMMotionRemover -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 70%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLBondedUtilities.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLBondedUtilities.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLBondedUtilities.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLBondedUtilities.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src/OpenCLBondedUtilities.cpp [ 70%] Linking CXX executable ../../../TestReferenceVariableVerletIntegrator cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceVariableVerletIntegrator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceVariableVerletIntegrator.dir/TestReferenceVariableVerletIntegrator.cpp.o -o ../../../TestReferenceVariableVerletIntegrator -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 70%] Built target TestReferenceCustomNonbondedForce make -f serialization/tests/CMakeFiles/TestSerializeCustomCVForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomCVForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeCustomCVForce.dir/DependInfo.cmake "--color=" [ 70%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaMultipoleForceImpl.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaMultipoleForceImpl.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaMultipoleForceImpl.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaMultipoleForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/src/AmoebaMultipoleForceImpl.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeCustomCVForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomCVForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 70%] Building CXX object plugins/cpupme/CMakeFiles/OpenMMPME.dir/src/CpuPmeKernels.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/cpupme && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMPME_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/cpupme/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/cpupme/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/include/pocketfft -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_PME_BUILDING_SHARED_LIBRARY -msse4.1 -MD -MT plugins/cpupme/CMakeFiles/OpenMMPME.dir/src/CpuPmeKernels.cpp.o -MF CMakeFiles/OpenMMPME.dir/src/CpuPmeKernels.cpp.o.d -o CMakeFiles/OpenMMPME.dir/src/CpuPmeKernels.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/cpupme/src/CpuPmeKernels.cpp [ 70%] Building CXX object serialization/tests/CMakeFiles/TestSerializeCustomCVForce.dir/TestSerializeCustomCVForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeCustomCVForce.dir/TestSerializeCustomCVForce.cpp.o -MF CMakeFiles/TestSerializeCustomCVForce.dir/TestSerializeCustomCVForce.cpp.o.d -o CMakeFiles/TestSerializeCustomCVForce.dir/TestSerializeCustomCVForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeCustomCVForce.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 70%] Built target TestSerializeCMMotionRemover make -f serialization/tests/CMakeFiles/TestSerializeCustomCentroidBondForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomCentroidBondForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeCustomCentroidBondForce.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeCustomCentroidBondForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomCentroidBondForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 70%] Built target TestReferenceVariableVerletIntegrator make -f serialization/tests/CMakeFiles/TestSerializeCustomCompoundBondForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomCompoundBondForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeCustomCompoundBondForce.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeCustomCompoundBondForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomCompoundBondForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 70%] Building CXX object serialization/tests/CMakeFiles/TestSerializeCustomCentroidBondForce.dir/TestSerializeCustomCentroidBondForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeCustomCentroidBondForce.dir/TestSerializeCustomCentroidBondForce.cpp.o -MF CMakeFiles/TestSerializeCustomCentroidBondForce.dir/TestSerializeCustomCentroidBondForce.cpp.o.d -o CMakeFiles/TestSerializeCustomCentroidBondForce.dir/TestSerializeCustomCentroidBondForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeCustomCentroidBondForce.cpp [ 70%] Building CXX object serialization/tests/CMakeFiles/TestSerializeCustomCompoundBondForce.dir/TestSerializeCustomCompoundBondForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeCustomCompoundBondForce.dir/TestSerializeCustomCompoundBondForce.cpp.o -MF CMakeFiles/TestSerializeCustomCompoundBondForce.dir/TestSerializeCustomCompoundBondForce.cpp.o.d -o CMakeFiles/TestSerializeCustomCompoundBondForce.dir/TestSerializeCustomCompoundBondForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeCustomCompoundBondForce.cpp [ 70%] Building CXX object plugins/rpmd/CMakeFiles/OpenMMRPMD.dir/openmmapi/src/RPMDMonteCarloBarostatImpl.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMRPMD_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_RPMD_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/rpmd/CMakeFiles/OpenMMRPMD.dir/openmmapi/src/RPMDMonteCarloBarostatImpl.cpp.o -MF CMakeFiles/OpenMMRPMD.dir/openmmapi/src/RPMDMonteCarloBarostatImpl.cpp.o.d -o CMakeFiles/OpenMMRPMD.dir/openmmapi/src/RPMDMonteCarloBarostatImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/src/RPMDMonteCarloBarostatImpl.cpp [ 70%] Linking CXX executable ../../TestSerializeAndersenThermostat cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeAndersenThermostat.dir/link.txt --verbose=1 [ 70%] Linking CXX executable ../../../TestReferenceNoseHooverIntegrator cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceNoseHooverIntegrator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceNoseHooverIntegrator.dir/TestReferenceNoseHooverIntegrator.cpp.o -o ../../../TestReferenceNoseHooverIntegrator -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeAndersenThermostat.dir/TestSerializeAndersenThermostat.cpp.o -o ../../TestSerializeAndersenThermostat -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 70%] Built target TestSerializeAndersenThermostat make -f serialization/tests/CMakeFiles/TestSerializeCustomExternalForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomExternalForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeCustomExternalForce.dir/DependInfo.cmake "--color=" [ 70%] Built target TestReferenceNoseHooverIntegrator make -f serialization/tests/CMakeFiles/TestSerializeCustomGBForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomGBForce.dir/depend make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeCustomExternalForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomExternalForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeCustomGBForce.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 70%] Building CXX object serialization/tests/CMakeFiles/TestSerializeCustomExternalForce.dir/TestSerializeCustomExternalForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeCustomExternalForce.dir/TestSerializeCustomExternalForce.cpp.o -MF CMakeFiles/TestSerializeCustomExternalForce.dir/TestSerializeCustomExternalForce.cpp.o.d -o CMakeFiles/TestSerializeCustomExternalForce.dir/TestSerializeCustomExternalForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeCustomExternalForce.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeCustomGBForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomGBForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 70%] Building CXX object serialization/tests/CMakeFiles/TestSerializeCustomGBForce.dir/TestSerializeCustomGBForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeCustomGBForce.dir/TestSerializeCustomGBForce.cpp.o -MF CMakeFiles/TestSerializeCustomGBForce.dir/TestSerializeCustomGBForce.cpp.o.d -o CMakeFiles/TestSerializeCustomGBForce.dir/TestSerializeCustomGBForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeCustomGBForce.cpp [ 70%] Building CXX object plugins/drude/CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeHelpers.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMDrude_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_DRUDE_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/drude/CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeHelpers.cpp.o -MF CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeHelpers.cpp.o.d -o CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeHelpers.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/src/DrudeHelpers.cpp [ 70%] Linking CXX executable ../../../TestReferenceDispersionPME cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceDispersionPME.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceDispersionPME.dir/TestReferenceDispersionPME.cpp.o -o ../../../TestReferenceDispersionPME -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 72%] Linking CXX executable ../../TestSerializeATMForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeATMForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeATMForce.dir/TestSerializeATMForce.cpp.o -o ../../TestSerializeATMForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 72%] Linking CXX executable ../../TestSerializeCustomAngleForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeCustomAngleForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeCustomAngleForce.dir/TestSerializeCustomAngleForce.cpp.o -o ../../TestSerializeCustomAngleForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 72%] Linking CXX executable ../../../TestReferenceVirtualSites cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceVirtualSites.dir/link.txt --verbose=1 [ 72%] Built target TestReferenceDispersionPME make -f serialization/tests/CMakeFiles/TestSerializeCustomHbondForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomHbondForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeCustomHbondForce.dir/DependInfo.cmake "--color=" /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceVirtualSites.dir/TestReferenceVirtualSites.cpp.o -o ../../../TestReferenceVirtualSites -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeCustomHbondForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomHbondForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 72%] Building CXX object serialization/tests/CMakeFiles/TestSerializeCustomHbondForce.dir/TestSerializeCustomHbondForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeCustomHbondForce.dir/TestSerializeCustomHbondForce.cpp.o -MF CMakeFiles/TestSerializeCustomHbondForce.dir/TestSerializeCustomHbondForce.cpp.o.d -o CMakeFiles/TestSerializeCustomHbondForce.dir/TestSerializeCustomHbondForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeCustomHbondForce.cpp [ 72%] Built target TestSerializeATMForce make -f serialization/tests/CMakeFiles/TestSerializeCustomManyParticleForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomManyParticleForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeCustomManyParticleForce.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeCustomManyParticleForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomManyParticleForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 72%] Linking CXX executable ../../../TestReferenceVerletIntegrator cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceVerletIntegrator.dir/link.txt --verbose=1 [ 72%] Building CXX object serialization/tests/CMakeFiles/TestSerializeCustomManyParticleForce.dir/TestSerializeCustomManyParticleForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeCustomManyParticleForce.dir/TestSerializeCustomManyParticleForce.cpp.o -MF CMakeFiles/TestSerializeCustomManyParticleForce.dir/TestSerializeCustomManyParticleForce.cpp.o.d -o CMakeFiles/TestSerializeCustomManyParticleForce.dir/TestSerializeCustomManyParticleForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeCustomManyParticleForce.cpp /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceVerletIntegrator.dir/TestReferenceVerletIntegrator.cpp.o -o ../../../TestReferenceVerletIntegrator -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 72%] Built target TestSerializeCustomAngleForce make -f serialization/tests/CMakeFiles/TestSerializeCustomNonbondedForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomNonbondedForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeCustomNonbondedForce.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeCustomNonbondedForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomNonbondedForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 72%] Built target TestReferenceVirtualSites make -f serialization/tests/CMakeFiles/TestSerializeCustomTorsionForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomTorsionForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeCustomTorsionForce.dir/DependInfo.cmake "--color=" [ 72%] Building CXX object serialization/tests/CMakeFiles/TestSerializeCustomNonbondedForce.dir/TestSerializeCustomNonbondedForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeCustomNonbondedForce.dir/TestSerializeCustomNonbondedForce.cpp.o -MF CMakeFiles/TestSerializeCustomNonbondedForce.dir/TestSerializeCustomNonbondedForce.cpp.o.d -o CMakeFiles/TestSerializeCustomNonbondedForce.dir/TestSerializeCustomNonbondedForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeCustomNonbondedForce.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeCustomTorsionForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomTorsionForce.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 72%] Built target TestReferenceVerletIntegrator [ 72%] Building CXX object serialization/tests/CMakeFiles/TestSerializeCustomTorsionForce.dir/TestSerializeCustomTorsionForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeCustomTorsionForce.dir/TestSerializeCustomTorsionForce.cpp.o -MF CMakeFiles/TestSerializeCustomTorsionForce.dir/TestSerializeCustomTorsionForce.cpp.o.d -o CMakeFiles/TestSerializeCustomTorsionForce.dir/TestSerializeCustomTorsionForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeCustomTorsionForce.cpp make -f serialization/tests/CMakeFiles/TestSerializeGBSAOBCForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeGBSAOBCForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeGBSAOBCForce.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeGBSAOBCForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeGBSAOBCForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 72%] Linking CXX executable ../../TestSerializeCMAPTorsion cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeCMAPTorsion.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeCMAPTorsion.dir/TestSerializeCMAPTorsion.cpp.o -o ../../TestSerializeCMAPTorsion -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 72%] Building CXX object serialization/tests/CMakeFiles/TestSerializeGBSAOBCForce.dir/TestSerializeGBSAOBCForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeGBSAOBCForce.dir/TestSerializeGBSAOBCForce.cpp.o -MF CMakeFiles/TestSerializeGBSAOBCForce.dir/TestSerializeGBSAOBCForce.cpp.o.d -o CMakeFiles/TestSerializeGBSAOBCForce.dir/TestSerializeGBSAOBCForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeGBSAOBCForce.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 72%] Built target TestSerializeCMAPTorsion make -f serialization/tests/CMakeFiles/TestSerializeGayBerneForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeGayBerneForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeGayBerneForce.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeGayBerneForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeGayBerneForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 72%] Building CXX object serialization/tests/CMakeFiles/TestSerializeGayBerneForce.dir/TestSerializeGayBerneForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeGayBerneForce.dir/TestSerializeGayBerneForce.cpp.o -MF CMakeFiles/TestSerializeGayBerneForce.dir/TestSerializeGayBerneForce.cpp.o.d -o CMakeFiles/TestSerializeGayBerneForce.dir/TestSerializeGayBerneForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeGayBerneForce.cpp [ 72%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaTorsionTorsionForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaTorsionTorsionForce.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaTorsionTorsionForce.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaTorsionTorsionForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/src/AmoebaTorsionTorsionForce.cpp [ 72%] Linking CXX executable ../../TestSerializeCustomExternalForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeCustomExternalForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeCustomExternalForce.dir/TestSerializeCustomExternalForce.cpp.o -o ../../TestSerializeCustomExternalForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 72%] Linking CXX executable ../../TestSerializeCustomCVForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeCustomCVForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeCustomCVForce.dir/TestSerializeCustomCVForce.cpp.o -o ../../TestSerializeCustomCVForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 72%] Linking CXX executable ../../TestSerializeCustomBondForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeCustomBondForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeCustomBondForce.dir/TestSerializeCustomBondForce.cpp.o -o ../../TestSerializeCustomBondForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 72%] Building CXX object plugins/drude/CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeIntegrator.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMDrude_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_DRUDE_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/drude/CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeIntegrator.cpp.o -MF CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeIntegrator.cpp.o.d -o CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/src/DrudeIntegrator.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 72%] Built target TestSerializeCustomExternalForce make -f serialization/tests/CMakeFiles/TestSerializeHarmonicAngleForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeHarmonicAngleForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeHarmonicAngleForce.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeHarmonicAngleForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeHarmonicAngleForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 72%] Building CXX object serialization/tests/CMakeFiles/TestSerializeHarmonicAngleForce.dir/TestSerializeHarmonicAngleForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeHarmonicAngleForce.dir/TestSerializeHarmonicAngleForce.cpp.o -MF CMakeFiles/TestSerializeHarmonicAngleForce.dir/TestSerializeHarmonicAngleForce.cpp.o.d -o CMakeFiles/TestSerializeHarmonicAngleForce.dir/TestSerializeHarmonicAngleForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeHarmonicAngleForce.cpp [ 72%] Linking CXX executable ../../../TestReferenceNonbondedForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceNonbondedForce.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceNonbondedForce.dir/TestReferenceNonbondedForce.cpp.o -o ../../../TestReferenceNonbondedForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 72%] Built target TestSerializeCustomBondForce make -f serialization/tests/CMakeFiles/TestSerializeHarmonicBondForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeHarmonicBondForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeHarmonicBondForce.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeHarmonicBondForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeHarmonicBondForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 72%] Building CXX object serialization/tests/CMakeFiles/TestSerializeHarmonicBondForce.dir/TestSerializeHarmonicBondForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeHarmonicBondForce.dir/TestSerializeHarmonicBondForce.cpp.o -MF CMakeFiles/TestSerializeHarmonicBondForce.dir/TestSerializeHarmonicBondForce.cpp.o.d -o CMakeFiles/TestSerializeHarmonicBondForce.dir/TestSerializeHarmonicBondForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeHarmonicBondForce.cpp [ 72%] Built target TestSerializeCustomCVForce make -f serialization/tests/CMakeFiles/TestSerializeIntegrator.dir/build.make serialization/tests/CMakeFiles/TestSerializeIntegrator.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeIntegrator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeIntegrator.dir/build.make serialization/tests/CMakeFiles/TestSerializeIntegrator.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 72%] Building CXX object serialization/tests/CMakeFiles/TestSerializeIntegrator.dir/TestSerializeIntegrator.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeIntegrator.dir/TestSerializeIntegrator.cpp.o -MF CMakeFiles/TestSerializeIntegrator.dir/TestSerializeIntegrator.cpp.o.d -o CMakeFiles/TestSerializeIntegrator.dir/TestSerializeIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeIntegrator.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 72%] Built target TestReferenceNonbondedForce make -f serialization/tests/CMakeFiles/TestSerializeMonteCarloAnisotropicBarostat.dir/build.make serialization/tests/CMakeFiles/TestSerializeMonteCarloAnisotropicBarostat.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeMonteCarloAnisotropicBarostat.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeMonteCarloAnisotropicBarostat.dir/build.make serialization/tests/CMakeFiles/TestSerializeMonteCarloAnisotropicBarostat.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 75%] Building CXX object serialization/tests/CMakeFiles/TestSerializeMonteCarloAnisotropicBarostat.dir/TestSerializeMonteCarloAnisotropicBarostat.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeMonteCarloAnisotropicBarostat.dir/TestSerializeMonteCarloAnisotropicBarostat.cpp.o -MF CMakeFiles/TestSerializeMonteCarloAnisotropicBarostat.dir/TestSerializeMonteCarloAnisotropicBarostat.cpp.o.d -o CMakeFiles/TestSerializeMonteCarloAnisotropicBarostat.dir/TestSerializeMonteCarloAnisotropicBarostat.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeMonteCarloAnisotropicBarostat.cpp [ 75%] Linking CXX shared library ../../libOpenMMRPMD.so cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMMRPMD.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,-z,relro -Wl,--as-needed -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libOpenMMRPMD.so -o ../../libOpenMMRPMD.so CMakeFiles/OpenMMRPMD.dir/openmmapi/src/RPMDIntegrator.cpp.o CMakeFiles/OpenMMRPMD.dir/openmmapi/src/RPMDMonteCarloBarostat.cpp.o CMakeFiles/OpenMMRPMD.dir/openmmapi/src/RPMDMonteCarloBarostatImpl.cpp.o -Wl,-rpath,"\$ORIGIN:" /usr/lib/x86_64-linux-gnu/libdl.a ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 75%] Built target OpenMMRPMD make -f serialization/tests/CMakeFiles/TestSerializeMonteCarloBarostat.dir/build.make serialization/tests/CMakeFiles/TestSerializeMonteCarloBarostat.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeMonteCarloBarostat.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeMonteCarloBarostat.dir/build.make serialization/tests/CMakeFiles/TestSerializeMonteCarloBarostat.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 75%] Building CXX object serialization/tests/CMakeFiles/TestSerializeMonteCarloBarostat.dir/TestSerializeMonteCarloBarostat.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeMonteCarloBarostat.dir/TestSerializeMonteCarloBarostat.cpp.o -MF CMakeFiles/TestSerializeMonteCarloBarostat.dir/TestSerializeMonteCarloBarostat.cpp.o.d -o CMakeFiles/TestSerializeMonteCarloBarostat.dir/TestSerializeMonteCarloBarostat.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeMonteCarloBarostat.cpp [ 75%] Building CXX object plugins/drude/CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeLangevinIntegrator.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMDrude_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_DRUDE_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/drude/CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeLangevinIntegrator.cpp.o -MF CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeLangevinIntegrator.cpp.o.d -o CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeLangevinIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/src/DrudeLangevinIntegrator.cpp [ 75%] Linking CXX executable ../../TestSerializeCustomTorsionForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeCustomTorsionForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeCustomTorsionForce.dir/TestSerializeCustomTorsionForce.cpp.o -o ../../TestSerializeCustomTorsionForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 75%] Built target TestSerializeCustomTorsionForce make -f serialization/tests/CMakeFiles/TestSerializeMonteCarloFlexibleBarostat.dir/build.make serialization/tests/CMakeFiles/TestSerializeMonteCarloFlexibleBarostat.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeMonteCarloFlexibleBarostat.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeMonteCarloFlexibleBarostat.dir/build.make serialization/tests/CMakeFiles/TestSerializeMonteCarloFlexibleBarostat.dir/build [ 77%] Linking CXX executable ../../TestSerializeCustomGBForce make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeCustomGBForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeCustomGBForce.dir/TestSerializeCustomGBForce.cpp.o -o ../../TestSerializeCustomGBForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 77%] Building CXX object serialization/tests/CMakeFiles/TestSerializeMonteCarloFlexibleBarostat.dir/TestSerializeMonteCarloFlexibleBarostat.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeMonteCarloFlexibleBarostat.dir/TestSerializeMonteCarloFlexibleBarostat.cpp.o -MF CMakeFiles/TestSerializeMonteCarloFlexibleBarostat.dir/TestSerializeMonteCarloFlexibleBarostat.cpp.o.d -o CMakeFiles/TestSerializeMonteCarloFlexibleBarostat.dir/TestSerializeMonteCarloFlexibleBarostat.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeMonteCarloFlexibleBarostat.cpp [ 77%] Linking CXX executable ../../TestSerializeGayBerneForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeGayBerneForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeGayBerneForce.dir/TestSerializeGayBerneForce.cpp.o -o ../../TestSerializeGayBerneForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 77%] Linking CXX executable ../../TestSerializeGBSAOBCForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeGBSAOBCForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeGBSAOBCForce.dir/TestSerializeGBSAOBCForce.cpp.o -o ../../TestSerializeGBSAOBCForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 77%] Built target TestSerializeGayBerneForce [ 77%] Built target TestSerializeGBSAOBCForce make -f serialization/tests/CMakeFiles/TestSerializeMonteCarloMembraneBarostat.dir/build.make serialization/tests/CMakeFiles/TestSerializeMonteCarloMembraneBarostat.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeMonteCarloMembraneBarostat.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 77%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaTorsionTorsionForceImpl.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaTorsionTorsionForceImpl.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaTorsionTorsionForceImpl.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaTorsionTorsionForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/src/AmoebaTorsionTorsionForceImpl.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeMonteCarloMembraneBarostat.dir/build.make serialization/tests/CMakeFiles/TestSerializeMonteCarloMembraneBarostat.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 77%] Built target TestSerializeCustomGBForce make -f serialization/tests/CMakeFiles/TestSerializeNonbondedForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeNonbondedForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeNonbondedForce.dir/DependInfo.cmake "--color=" [ 77%] Linking CXX executable ../../TestSerializeCustomCompoundBondForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeCustomCompoundBondForce.dir/link.txt --verbose=1 [ 77%] Building CXX object serialization/tests/CMakeFiles/TestSerializeMonteCarloMembraneBarostat.dir/TestSerializeMonteCarloMembraneBarostat.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeMonteCarloMembraneBarostat.dir/TestSerializeMonteCarloMembraneBarostat.cpp.o -MF CMakeFiles/TestSerializeMonteCarloMembraneBarostat.dir/TestSerializeMonteCarloMembraneBarostat.cpp.o.d -o CMakeFiles/TestSerializeMonteCarloMembraneBarostat.dir/TestSerializeMonteCarloMembraneBarostat.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeMonteCarloMembraneBarostat.cpp /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeCustomCompoundBondForce.dir/TestSerializeCustomCompoundBondForce.cpp.o -o ../../TestSerializeCustomCompoundBondForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeNonbondedForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeNonbondedForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 77%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaVdwForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaVdwForce.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaVdwForce.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaVdwForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/src/AmoebaVdwForce.cpp [ 77%] Building CXX object serialization/tests/CMakeFiles/TestSerializeNonbondedForce.dir/TestSerializeNonbondedForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeNonbondedForce.dir/TestSerializeNonbondedForce.cpp.o -MF CMakeFiles/TestSerializeNonbondedForce.dir/TestSerializeNonbondedForce.cpp.o.d -o CMakeFiles/TestSerializeNonbondedForce.dir/TestSerializeNonbondedForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeNonbondedForce.cpp [ 77%] Building CXX object plugins/drude/CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeNoseHooverIntegrator.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMDrude_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_DRUDE_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/drude/CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeNoseHooverIntegrator.cpp.o -MF CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeNoseHooverIntegrator.cpp.o.d -o CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeNoseHooverIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/src/DrudeNoseHooverIntegrator.cpp [ 77%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLCompact.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLCompact.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLCompact.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLCompact.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src/OpenCLCompact.cpp [ 77%] Linking CXX executable ../../TestSerializeCustomCentroidBondForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeCustomCentroidBondForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeCustomCentroidBondForce.dir/TestSerializeCustomCentroidBondForce.cpp.o -o ../../TestSerializeCustomCentroidBondForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 77%] Built target TestSerializeCustomCompoundBondForce make -f serialization/tests/CMakeFiles/TestSerializeNoseHooverIntegrator.dir/build.make serialization/tests/CMakeFiles/TestSerializeNoseHooverIntegrator.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeNoseHooverIntegrator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeNoseHooverIntegrator.dir/build.make serialization/tests/CMakeFiles/TestSerializeNoseHooverIntegrator.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 77%] Built target TestSerializeCustomCentroidBondForce make -f serialization/tests/CMakeFiles/TestSerializePeriodicTorsionForce.dir/build.make serialization/tests/CMakeFiles/TestSerializePeriodicTorsionForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializePeriodicTorsionForce.dir/DependInfo.cmake "--color=" [ 77%] Building CXX object serialization/tests/CMakeFiles/TestSerializeNoseHooverIntegrator.dir/TestSerializeNoseHooverIntegrator.cpp.o make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializePeriodicTorsionForce.dir/build.make serialization/tests/CMakeFiles/TestSerializePeriodicTorsionForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeNoseHooverIntegrator.dir/TestSerializeNoseHooverIntegrator.cpp.o -MF CMakeFiles/TestSerializeNoseHooverIntegrator.dir/TestSerializeNoseHooverIntegrator.cpp.o.d -o CMakeFiles/TestSerializeNoseHooverIntegrator.dir/TestSerializeNoseHooverIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeNoseHooverIntegrator.cpp [ 77%] Building CXX object serialization/tests/CMakeFiles/TestSerializePeriodicTorsionForce.dir/TestSerializePeriodicTorsionForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializePeriodicTorsionForce.dir/TestSerializePeriodicTorsionForce.cpp.o -MF CMakeFiles/TestSerializePeriodicTorsionForce.dir/TestSerializePeriodicTorsionForce.cpp.o.d -o CMakeFiles/TestSerializePeriodicTorsionForce.dir/TestSerializePeriodicTorsionForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializePeriodicTorsionForce.cpp [ 77%] Linking CXX executable ../../TestSerializeHarmonicBondForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeHarmonicBondForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeHarmonicBondForce.dir/TestSerializeHarmonicBondForce.cpp.o -o ../../TestSerializeHarmonicBondForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 77%] Linking CXX executable ../../TestSerializeHarmonicAngleForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeHarmonicAngleForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeHarmonicAngleForce.dir/TestSerializeHarmonicAngleForce.cpp.o -o ../../TestSerializeHarmonicAngleForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 77%] Linking CXX executable ../../TestSerializeCustomManyParticleForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeCustomManyParticleForce.dir/link.txt --verbose=1 [ 77%] Linking CXX executable ../../TestSerializeCustomNonbondedForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeCustomNonbondedForce.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeCustomManyParticleForce.dir/TestSerializeCustomManyParticleForce.cpp.o -o ../../TestSerializeCustomManyParticleForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeCustomNonbondedForce.dir/TestSerializeCustomNonbondedForce.cpp.o -o ../../TestSerializeCustomNonbondedForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 77%] Built target TestSerializeHarmonicBondForce make -f serialization/tests/CMakeFiles/TestSerializeRBTorsionForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeRBTorsionForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeRBTorsionForce.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeRBTorsionForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeRBTorsionForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 77%] Building CXX object serialization/tests/CMakeFiles/TestSerializeRBTorsionForce.dir/TestSerializeRBTorsionForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeRBTorsionForce.dir/TestSerializeRBTorsionForce.cpp.o -MF CMakeFiles/TestSerializeRBTorsionForce.dir/TestSerializeRBTorsionForce.cpp.o.d -o CMakeFiles/TestSerializeRBTorsionForce.dir/TestSerializeRBTorsionForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeRBTorsionForce.cpp [ 77%] Linking CXX executable ../../TestSerializeMonteCarloAnisotropicBarostat cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeMonteCarloAnisotropicBarostat.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeMonteCarloAnisotropicBarostat.dir/TestSerializeMonteCarloAnisotropicBarostat.cpp.o -o ../../TestSerializeMonteCarloAnisotropicBarostat -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 77%] Built target TestSerializeHarmonicAngleForce make -f serialization/tests/CMakeFiles/TestSerializeRMSDForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeRMSDForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeRMSDForce.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeRMSDForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeRMSDForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 77%] Building CXX object serialization/tests/CMakeFiles/TestSerializeRMSDForce.dir/TestSerializeRMSDForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeRMSDForce.dir/TestSerializeRMSDForce.cpp.o -MF CMakeFiles/TestSerializeRMSDForce.dir/TestSerializeRMSDForce.cpp.o.d -o CMakeFiles/TestSerializeRMSDForce.dir/TestSerializeRMSDForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeRMSDForce.cpp [ 77%] Linking CXX executable ../../TestSerializeCustomHbondForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeCustomHbondForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeCustomHbondForce.dir/TestSerializeCustomHbondForce.cpp.o -o ../../TestSerializeCustomHbondForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 77%] Built target TestSerializeCustomNonbondedForce make -f serialization/tests/CMakeFiles/TestSerializeState.dir/build.make serialization/tests/CMakeFiles/TestSerializeState.dir/depend make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeState.dir/DependInfo.cmake "--color=" [ 77%] Built target TestSerializeMonteCarloAnisotropicBarostat make -f serialization/tests/CMakeFiles/TestSerializeSystem.dir/build.make serialization/tests/CMakeFiles/TestSerializeSystem.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeSystem.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeState.dir/build.make serialization/tests/CMakeFiles/TestSerializeState.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 77%] Building CXX object serialization/tests/CMakeFiles/TestSerializeState.dir/TestSerializeState.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeState.dir/TestSerializeState.cpp.o -MF CMakeFiles/TestSerializeState.dir/TestSerializeState.cpp.o.d -o CMakeFiles/TestSerializeState.dir/TestSerializeState.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeState.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeSystem.dir/build.make serialization/tests/CMakeFiles/TestSerializeSystem.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 79%] Building CXX object serialization/tests/CMakeFiles/TestSerializeSystem.dir/TestSerializeSystem.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeSystem.dir/TestSerializeSystem.cpp.o -MF CMakeFiles/TestSerializeSystem.dir/TestSerializeSystem.cpp.o.d -o CMakeFiles/TestSerializeSystem.dir/TestSerializeSystem.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeSystem.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 79%] Built target TestSerializeCustomManyParticleForce make -f serialization/tests/CMakeFiles/TestSerializeTabulatedFunctions.dir/build.make serialization/tests/CMakeFiles/TestSerializeTabulatedFunctions.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeTabulatedFunctions.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeTabulatedFunctions.dir/build.make serialization/tests/CMakeFiles/TestSerializeTabulatedFunctions.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 79%] Built target TestSerializeCustomHbondForce make -f tests/CMakeFiles/TestEnforcePeriodicBox.dir/build.make tests/CMakeFiles/TestEnforcePeriodicBox.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests/CMakeFiles/TestEnforcePeriodicBox.dir/DependInfo.cmake "--color=" [ 79%] Building CXX object serialization/tests/CMakeFiles/TestSerializeTabulatedFunctions.dir/TestSerializeTabulatedFunctions.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeTabulatedFunctions.dir/TestSerializeTabulatedFunctions.cpp.o -MF CMakeFiles/TestSerializeTabulatedFunctions.dir/TestSerializeTabulatedFunctions.cpp.o.d -o CMakeFiles/TestSerializeTabulatedFunctions.dir/TestSerializeTabulatedFunctions.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeTabulatedFunctions.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f tests/CMakeFiles/TestEnforcePeriodicBox.dir/build.make tests/CMakeFiles/TestEnforcePeriodicBox.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 79%] Building CXX object tests/CMakeFiles/TestEnforcePeriodicBox.dir/TestEnforcePeriodicBox.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT tests/CMakeFiles/TestEnforcePeriodicBox.dir/TestEnforcePeriodicBox.cpp.o -MF CMakeFiles/TestEnforcePeriodicBox.dir/TestEnforcePeriodicBox.cpp.o.d -o CMakeFiles/TestEnforcePeriodicBox.dir/TestEnforcePeriodicBox.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/tests/TestEnforcePeriodicBox.cpp [ 79%] Linking CXX executable ../../TestSerializeMonteCarloBarostat cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeMonteCarloBarostat.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeMonteCarloBarostat.dir/TestSerializeMonteCarloBarostat.cpp.o -o ../../TestSerializeMonteCarloBarostat -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 79%] Built target TestSerializeMonteCarloBarostat make -f tests/CMakeFiles/TestFindExclusions.dir/build.make tests/CMakeFiles/TestFindExclusions.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests/CMakeFiles/TestFindExclusions.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f tests/CMakeFiles/TestFindExclusions.dir/build.make tests/CMakeFiles/TestFindExclusions.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 79%] Building CXX object tests/CMakeFiles/TestFindExclusions.dir/TestFindExclusions.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT tests/CMakeFiles/TestFindExclusions.dir/TestFindExclusions.cpp.o -MF CMakeFiles/TestFindExclusions.dir/TestFindExclusions.cpp.o.d -o CMakeFiles/TestFindExclusions.dir/TestFindExclusions.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/tests/TestFindExclusions.cpp [ 79%] Linking CXX executable ../../TestSerializePeriodicTorsionForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializePeriodicTorsionForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializePeriodicTorsionForce.dir/TestSerializePeriodicTorsionForce.cpp.o -o ../../TestSerializePeriodicTorsionForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 79%] Built target TestSerializePeriodicTorsionForce make -f tests/CMakeFiles/TestFindMolecules.dir/build.make tests/CMakeFiles/TestFindMolecules.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests/CMakeFiles/TestFindMolecules.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f tests/CMakeFiles/TestFindMolecules.dir/build.make tests/CMakeFiles/TestFindMolecules.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 79%] Building CXX object tests/CMakeFiles/TestFindMolecules.dir/TestFindMolecules.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT tests/CMakeFiles/TestFindMolecules.dir/TestFindMolecules.cpp.o -MF CMakeFiles/TestFindMolecules.dir/TestFindMolecules.cpp.o.d -o CMakeFiles/TestFindMolecules.dir/TestFindMolecules.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/tests/TestFindMolecules.cpp [ 79%] Linking CXX executable ../../TestSerializeMonteCarloMembraneBarostat cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeMonteCarloMembraneBarostat.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeMonteCarloMembraneBarostat.dir/TestSerializeMonteCarloMembraneBarostat.cpp.o -o ../../TestSerializeMonteCarloMembraneBarostat -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 79%] Linking CXX executable ../../TestSerializeMonteCarloFlexibleBarostat cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeMonteCarloFlexibleBarostat.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeMonteCarloFlexibleBarostat.dir/TestSerializeMonteCarloFlexibleBarostat.cpp.o -o ../../TestSerializeMonteCarloFlexibleBarostat -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 79%] Built target TestSerializeMonteCarloMembraneBarostat make -f tests/CMakeFiles/TestParser.dir/build.make tests/CMakeFiles/TestParser.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests/CMakeFiles/TestParser.dir/DependInfo.cmake "--color=" [ 79%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaVdwForceImpl.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaVdwForceImpl.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaVdwForceImpl.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaVdwForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/src/AmoebaVdwForceImpl.cpp [ 79%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomManyParticleForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomManyParticleForce.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomManyParticleForce.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomManyParticleForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src/CpuCustomManyParticleForce.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f tests/CMakeFiles/TestParser.dir/build.make tests/CMakeFiles/TestParser.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 79%] Building CXX object tests/CMakeFiles/TestParser.dir/TestParser.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT tests/CMakeFiles/TestParser.dir/TestParser.cpp.o -MF CMakeFiles/TestParser.dir/TestParser.cpp.o.d -o CMakeFiles/TestParser.dir/TestParser.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/tests/TestParser.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 79%] Built target TestSerializeMonteCarloFlexibleBarostat make -f tests/CMakeFiles/TestSplineFitter.dir/build.make tests/CMakeFiles/TestSplineFitter.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests/CMakeFiles/TestSplineFitter.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f tests/CMakeFiles/TestSplineFitter.dir/build.make tests/CMakeFiles/TestSplineFitter.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 79%] Building CXX object tests/CMakeFiles/TestSplineFitter.dir/TestSplineFitter.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT tests/CMakeFiles/TestSplineFitter.dir/TestSplineFitter.cpp.o -MF CMakeFiles/TestSplineFitter.dir/TestSplineFitter.cpp.o.d -o CMakeFiles/TestSplineFitter.dir/TestSplineFitter.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/tests/TestSplineFitter.cpp [ 79%] Building CXX object plugins/drude/CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeSCFIntegrator.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMDrude_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_DRUDE_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/drude/CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeSCFIntegrator.cpp.o -MF CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeSCFIntegrator.cpp.o.d -o CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeSCFIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/src/DrudeSCFIntegrator.cpp [ 79%] Linking CXX executable ../../TestSerializeRMSDForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeRMSDForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeRMSDForce.dir/TestSerializeRMSDForce.cpp.o -o ../../TestSerializeRMSDForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 79%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaWcaDispersionForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaWcaDispersionForce.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaWcaDispersionForce.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaWcaDispersionForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/src/AmoebaWcaDispersionForce.cpp [ 79%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLContext.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLContext.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLContext.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLContext.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src/OpenCLContext.cpp [ 79%] Linking CXX executable ../TestEnforcePeriodicBox cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestEnforcePeriodicBox.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestEnforcePeriodicBox.dir/TestEnforcePeriodicBox.cpp.o -o ../TestEnforcePeriodicBox -Wl,-rpath,"\$ORIGIN" ../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 79%] Built target TestSerializeRMSDForce make -f tests/CMakeFiles/TestSystem.dir/build.make tests/CMakeFiles/TestSystem.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests/CMakeFiles/TestSystem.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f tests/CMakeFiles/TestSystem.dir/build.make tests/CMakeFiles/TestSystem.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 79%] Building CXX object tests/CMakeFiles/TestSystem.dir/TestSystem.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT tests/CMakeFiles/TestSystem.dir/TestSystem.cpp.o -MF CMakeFiles/TestSystem.dir/TestSystem.cpp.o.d -o CMakeFiles/TestSystem.dir/TestSystem.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/tests/TestSystem.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 79%] Built target TestEnforcePeriodicBox make -f tests/CMakeFiles/TestVectorExpression.dir/build.make tests/CMakeFiles/TestVectorExpression.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests/CMakeFiles/TestVectorExpression.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f tests/CMakeFiles/TestVectorExpression.dir/build.make tests/CMakeFiles/TestVectorExpression.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 79%] Building CXX object tests/CMakeFiles/TestVectorExpression.dir/TestVectorExpression.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT tests/CMakeFiles/TestVectorExpression.dir/TestVectorExpression.cpp.o -MF CMakeFiles/TestVectorExpression.dir/TestVectorExpression.cpp.o.d -o CMakeFiles/TestVectorExpression.dir/TestVectorExpression.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/tests/TestVectorExpression.cpp [ 81%] Linking CXX executable ../../../TestReferenceEwald cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceEwald.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceEwald.dir/TestReferenceEwald.cpp.o -o ../../../TestReferenceEwald -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 81%] Linking CXX executable ../TestFindMolecules cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestFindMolecules.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestFindMolecules.dir/TestFindMolecules.cpp.o -o ../TestFindMolecules -Wl,-rpath,"\$ORIGIN" ../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 81%] Built target TestReferenceEwald make -f tests/CMakeFiles/TestVectorize.dir/build.make tests/CMakeFiles/TestVectorize.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests/CMakeFiles/TestVectorize.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f tests/CMakeFiles/TestVectorize.dir/build.make tests/CMakeFiles/TestVectorize.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 81%] Building CXX object tests/CMakeFiles/TestVectorize.dir/TestVectorize.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT tests/CMakeFiles/TestVectorize.dir/TestVectorize.cpp.o -MF CMakeFiles/TestVectorize.dir/TestVectorize.cpp.o.d -o CMakeFiles/TestVectorize.dir/TestVectorize.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/tests/TestVectorize.cpp [ 81%] Linking CXX executable ../../TestSerializeRBTorsionForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeRBTorsionForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeRBTorsionForce.dir/TestSerializeRBTorsionForce.cpp.o -o ../../TestSerializeRBTorsionForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 81%] Building CXX object plugins/drude/CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeForceProxy.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMDrude_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_DRUDE_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/drude/CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeForceProxy.cpp.o -MF CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeForceProxy.cpp.o.d -o CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/serialization/src/DrudeForceProxy.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 81%] Built target TestFindMolecules make -f tests/CMakeFiles/TestVectorizeAvx.dir/build.make tests/CMakeFiles/TestVectorizeAvx.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests/CMakeFiles/TestVectorizeAvx.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f tests/CMakeFiles/TestVectorizeAvx.dir/build.make tests/CMakeFiles/TestVectorizeAvx.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 81%] Building CXX object tests/CMakeFiles/TestVectorizeAvx.dir/TestVectorizeAvx.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -mavx -MD -MT tests/CMakeFiles/TestVectorizeAvx.dir/TestVectorizeAvx.cpp.o -MF CMakeFiles/TestVectorizeAvx.dir/TestVectorizeAvx.cpp.o.d -o CMakeFiles/TestVectorizeAvx.dir/TestVectorizeAvx.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/tests/TestVectorizeAvx.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 81%] Built target TestSerializeRBTorsionForce make -f tests/CMakeFiles/TestVectorizeAvx2.dir/build.make tests/CMakeFiles/TestVectorizeAvx2.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests/CMakeFiles/TestVectorizeAvx2.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f tests/CMakeFiles/TestVectorizeAvx2.dir/build.make tests/CMakeFiles/TestVectorizeAvx2.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 81%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaWcaDispersionForceImpl.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaWcaDispersionForceImpl.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaWcaDispersionForceImpl.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaWcaDispersionForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/src/AmoebaWcaDispersionForceImpl.cpp [ 81%] Building CXX object tests/CMakeFiles/TestVectorizeAvx2.dir/TestVectorizeAvx2.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -mfma -mavx2 -MD -MT tests/CMakeFiles/TestVectorizeAvx2.dir/TestVectorizeAvx2.cpp.o -MF CMakeFiles/TestVectorizeAvx2.dir/TestVectorizeAvx2.cpp.o.d -o CMakeFiles/TestVectorizeAvx2.dir/TestVectorizeAvx2.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/tests/TestVectorizeAvx2.cpp [ 81%] Linking CXX executable ../../TestSerializeNoseHooverIntegrator cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeNoseHooverIntegrator.dir/link.txt --verbose=1 [ 81%] Linking CXX executable ../TestFindExclusions cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestFindExclusions.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeNoseHooverIntegrator.dir/TestSerializeNoseHooverIntegrator.cpp.o -o ../../TestSerializeNoseHooverIntegrator -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestFindExclusions.dir/TestFindExclusions.cpp.o -o ../TestFindExclusions -Wl,-rpath,"\$ORIGIN" ../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 81%] Built target TestSerializeNoseHooverIntegrator make -f examples/CMakeFiles/HelloArgon.dir/build.make examples/CMakeFiles/HelloArgon.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/examples /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/examples /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/examples/CMakeFiles/HelloArgon.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f examples/CMakeFiles/HelloArgon.dir/build.make examples/CMakeFiles/HelloArgon.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 81%] Built target TestFindExclusions make -f examples/CMakeFiles/HelloSodiumChloride.dir/build.make examples/CMakeFiles/HelloSodiumChloride.dir/depend [ 81%] Linking CXX executable ../../TestSerializeNonbondedForce [ 81%] Building CXX object examples/CMakeFiles/HelloArgon.dir/HelloArgon.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeNonbondedForce.dir/link.txt --verbose=1 make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/examples /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/examples /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/examples/CMakeFiles/HelloSodiumChloride.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/examples && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT examples/CMakeFiles/HelloArgon.dir/HelloArgon.cpp.o -MF CMakeFiles/HelloArgon.dir/HelloArgon.cpp.o.d -o CMakeFiles/HelloArgon.dir/HelloArgon.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/examples/HelloArgon.cpp /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeNonbondedForce.dir/TestSerializeNonbondedForce.cpp.o -o ../../TestSerializeNonbondedForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f examples/CMakeFiles/HelloSodiumChloride.dir/build.make examples/CMakeFiles/HelloSodiumChloride.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 81%] Building CXX object plugins/drude/CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeLangevinIntegratorProxy.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMDrude_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_DRUDE_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/drude/CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeLangevinIntegratorProxy.cpp.o -MF CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeLangevinIntegratorProxy.cpp.o.d -o CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeLangevinIntegratorProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/serialization/src/DrudeLangevinIntegratorProxy.cpp [ 81%] Building CXX object examples/CMakeFiles/HelloSodiumChloride.dir/HelloSodiumChloride.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/examples && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT examples/CMakeFiles/HelloSodiumChloride.dir/HelloSodiumChloride.cpp.o -MF CMakeFiles/HelloSodiumChloride.dir/HelloSodiumChloride.cpp.o.d -o CMakeFiles/HelloSodiumChloride.dir/HelloSodiumChloride.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/examples/HelloSodiumChloride.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 81%] Built target TestSerializeNonbondedForce make -f examples/CMakeFiles/HelloEthane.dir/build.make examples/CMakeFiles/HelloEthane.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/examples /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/examples /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/examples/CMakeFiles/HelloEthane.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f examples/CMakeFiles/HelloEthane.dir/build.make examples/CMakeFiles/HelloEthane.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 83%] Building CXX object examples/CMakeFiles/HelloEthane.dir/HelloEthane.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/examples && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT examples/CMakeFiles/HelloEthane.dir/HelloEthane.cpp.o -MF CMakeFiles/HelloEthane.dir/HelloEthane.cpp.o.d -o CMakeFiles/HelloEthane.dir/HelloEthane.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/examples/HelloEthane.cpp [ 83%] Linking CXX executable ../TestVectorExpression cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestVectorExpression.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestVectorExpression.dir/TestVectorExpression.cpp.o -o ../TestVectorExpression -Wl,-rpath,"\$ORIGIN" ../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 83%] Built target TestVectorExpression make -f examples/CMakeFiles/HelloWaterBox.dir/build.make examples/CMakeFiles/HelloWaterBox.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/examples /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/examples /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/examples/CMakeFiles/HelloWaterBox.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f examples/CMakeFiles/HelloWaterBox.dir/build.make examples/CMakeFiles/HelloWaterBox.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 83%] Building CXX object examples/CMakeFiles/HelloWaterBox.dir/HelloWaterBox.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/examples && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT examples/CMakeFiles/HelloWaterBox.dir/HelloWaterBox.cpp.o -MF CMakeFiles/HelloWaterBox.dir/HelloWaterBox.cpp.o.d -o CMakeFiles/HelloWaterBox.dir/HelloWaterBox.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/examples/HelloWaterBox.cpp [ 85%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/HippoNonbondedForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/HippoNonbondedForce.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/HippoNonbondedForce.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/HippoNonbondedForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/src/HippoNonbondedForce.cpp [ 85%] Linking CXX executable ../../TestSerializeIntegrator cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeIntegrator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeIntegrator.dir/TestSerializeIntegrator.cpp.o -o ../../TestSerializeIntegrator -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 85%] Linking CXX executable ../../TestSerializeState cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeState.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeState.dir/TestSerializeState.cpp.o -o ../../TestSerializeState -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 85%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/HippoNonbondedForceImpl.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/HippoNonbondedForceImpl.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/HippoNonbondedForceImpl.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/HippoNonbondedForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/src/HippoNonbondedForceImpl.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 85%] Built target TestSerializeIntegrator make -f plugins/rpmd/platforms/reference/CMakeFiles/OpenMMRPMDReference.dir/build.make plugins/rpmd/platforms/reference/CMakeFiles/OpenMMRPMDReference.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/reference /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/reference /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/reference/CMakeFiles/OpenMMRPMDReference.dir/DependInfo.cmake "--color=" [ 85%] Building CXX object plugins/drude/CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeNoseHooverIntegratorProxy.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMDrude_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_DRUDE_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/drude/CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeNoseHooverIntegratorProxy.cpp.o -MF CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeNoseHooverIntegratorProxy.cpp.o.d -o CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeNoseHooverIntegratorProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/serialization/src/DrudeNoseHooverIntegratorProxy.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/rpmd/platforms/reference/CMakeFiles/OpenMMRPMDReference.dir/build.make plugins/rpmd/platforms/reference/CMakeFiles/OpenMMRPMDReference.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 85%] Building CXX object plugins/rpmd/platforms/reference/CMakeFiles/OpenMMRPMDReference.dir/src/ReferenceRpmdKernelFactory.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/reference && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMRPMDReference_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/rpmd/platforms/reference/CMakeFiles/OpenMMRPMDReference.dir/src/ReferenceRpmdKernelFactory.cpp.o -MF CMakeFiles/OpenMMRPMDReference.dir/src/ReferenceRpmdKernelFactory.cpp.o.d -o CMakeFiles/OpenMMRPMDReference.dir/src/ReferenceRpmdKernelFactory.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/reference/src/ReferenceRpmdKernelFactory.cpp [ 85%] Linking CXX executable ../TestSystem cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSystem.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSystem.dir/TestSystem.cpp.o -o ../TestSystem -Wl,-rpath,"\$ORIGIN" ../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 85%] Linking CXX executable ../../TestSerializeSystem cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeSystem.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeSystem.dir/TestSerializeSystem.cpp.o -o ../../TestSerializeSystem -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 85%] Built target TestSerializeState [ 85%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaGeneralizedKirkwoodForceProxy.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaGeneralizedKirkwoodForceProxy.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaGeneralizedKirkwoodForceProxy.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaGeneralizedKirkwoodForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/src/AmoebaGeneralizedKirkwoodForceProxy.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 85%] Built target TestSystem make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 85%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaMultipoleForceProxy.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaMultipoleForceProxy.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaMultipoleForceProxy.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaMultipoleForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/src/AmoebaMultipoleForceProxy.cpp [ 85%] Built target TestSerializeSystem [ 85%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaSerializationProxyRegistration.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaSerializationProxyRegistration.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaSerializationProxyRegistration.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaSerializationProxyRegistration.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/src/AmoebaSerializationProxyRegistration.cpp [ 85%] Linking CXX executable ../HelloSodiumChloride cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/HelloSodiumChloride.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/HelloSodiumChloride.dir/HelloSodiumChloride.cpp.o -o ../HelloSodiumChloride -Wl,-rpath,"\$ORIGIN" ../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 85%] Linking CXX executable ../HelloArgon cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/HelloArgon.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/HelloArgon.dir/HelloArgon.cpp.o -o ../HelloArgon -Wl,-rpath,"\$ORIGIN" ../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 85%] Built target HelloSodiumChloride [ 85%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaTorsionTorsionForceProxy.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaTorsionTorsionForceProxy.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaTorsionTorsionForceProxy.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaTorsionTorsionForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/src/AmoebaTorsionTorsionForceProxy.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 85%] Built target HelloArgon [ 85%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaVdwForceProxy.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaVdwForceProxy.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaVdwForceProxy.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaVdwForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/src/AmoebaVdwForceProxy.cpp [ 85%] Building CXX object plugins/rpmd/platforms/reference/CMakeFiles/OpenMMRPMDReference.dir/src/ReferenceRpmdKernels.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/reference && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMRPMDReference_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/rpmd/platforms/reference/CMakeFiles/OpenMMRPMDReference.dir/src/ReferenceRpmdKernels.cpp.o -MF CMakeFiles/OpenMMRPMDReference.dir/src/ReferenceRpmdKernels.cpp.o.d -o CMakeFiles/OpenMMRPMDReference.dir/src/ReferenceRpmdKernels.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/reference/src/ReferenceRpmdKernels.cpp [ 85%] Linking CXX executable ../HelloEthane cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/HelloEthane.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/HelloEthane.dir/HelloEthane.cpp.o -o ../HelloEthane -Wl,-rpath,"\$ORIGIN" ../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 85%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaWcaDispersionForceProxy.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaWcaDispersionForceProxy.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaWcaDispersionForceProxy.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaWcaDispersionForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/src/AmoebaWcaDispersionForceProxy.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 85%] Built target HelloEthane [ 85%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/serialization/src/HippoNonbondedForceProxy.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/serialization/src/HippoNonbondedForceProxy.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/serialization/src/HippoNonbondedForceProxy.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/serialization/src/HippoNonbondedForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/src/HippoNonbondedForceProxy.cpp [ 85%] Building CXX object plugins/drude/CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeSerializationProxyRegistration.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMDrude_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_DRUDE_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/drude/CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeSerializationProxyRegistration.cpp.o -MF CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeSerializationProxyRegistration.cpp.o.d -o CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeSerializationProxyRegistration.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/serialization/src/DrudeSerializationProxyRegistration.cpp [ 85%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLEvent.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLEvent.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLEvent.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLEvent.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src/OpenCLEvent.cpp [ 85%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForce.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForce.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src/CpuCustomNonbondedForce.cpp [ 85%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForceAvx.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -mavx -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForceAvx.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForceAvx.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForceAvx.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src/CpuCustomNonbondedForceAvx.cpp [ 85%] Linking CXX executable ../HelloWaterBox cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/HelloWaterBox.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/HelloWaterBox.dir/HelloWaterBox.cpp.o -o ../HelloWaterBox -Wl,-rpath,"\$ORIGIN" ../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 85%] Linking CXX executable ../TestVectorizeAvx2 cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestVectorizeAvx2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestVectorizeAvx2.dir/TestVectorizeAvx2.cpp.o -o ../TestVectorizeAvx2 -Wl,-rpath,"\$ORIGIN" ../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 87%] Linking CXX shared library ../../libOpenMMDrude.so cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMMDrude.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,-z,relro -Wl,--as-needed -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libOpenMMDrude.so -o ../../libOpenMMDrude.so CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeForce.cpp.o CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeForceImpl.cpp.o CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeHelpers.cpp.o CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeIntegrator.cpp.o CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeLangevinIntegrator.cpp.o CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeNoseHooverIntegrator.cpp.o CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeSCFIntegrator.cpp.o CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeForceProxy.cpp.o CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeLangevinIntegratorProxy.cpp.o CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeNoseHooverIntegratorProxy.cpp.o CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeSerializationProxyRegistration.cpp.o -Wl,-rpath,"\$ORIGIN:" /usr/lib/x86_64-linux-gnu/libdl.a ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 87%] Built target TestVectorizeAvx2 [ 87%] Built target HelloWaterBox [ 87%] Linking CXX executable ../TestSplineFitter cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSplineFitter.dir/link.txt --verbose=1 [ 87%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLFFT3D.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLFFT3D.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLFFT3D.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLFFT3D.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src/OpenCLFFT3D.cpp [ 87%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForceFvec.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForceFvec.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForceFvec.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForceFvec.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src/CpuCustomNonbondedForceFvec.cpp [ 87%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForceVec4.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForceVec4.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForceVec4.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForceVec4.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src/CpuCustomNonbondedForceVec4.cpp /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSplineFitter.dir/TestSplineFitter.cpp.o -o ../TestSplineFitter -Wl,-rpath,"\$ORIGIN" ../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 87%] Built target OpenMMDrude make -f plugins/drude/platforms/reference/CMakeFiles/OpenMMDrudeReference.dir/build.make plugins/drude/platforms/reference/CMakeFiles/OpenMMDrudeReference.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/reference /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/CMakeFiles/OpenMMDrudeReference.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/drude/platforms/reference/CMakeFiles/OpenMMDrudeReference.dir/build.make plugins/drude/platforms/reference/CMakeFiles/OpenMMDrudeReference.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 87%] Building CXX object plugins/drude/platforms/reference/CMakeFiles/OpenMMDrudeReference.dir/src/ReferenceDrudeKernelFactory.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMDrudeReference_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/drude/platforms/reference/CMakeFiles/OpenMMDrudeReference.dir/src/ReferenceDrudeKernelFactory.cpp.o -MF CMakeFiles/OpenMMDrudeReference.dir/src/ReferenceDrudeKernelFactory.cpp.o.d -o CMakeFiles/OpenMMDrudeReference.dir/src/ReferenceDrudeKernelFactory.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/reference/src/ReferenceDrudeKernelFactory.cpp [ 87%] Linking CXX executable ../../TestSerializeTabulatedFunctions cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeTabulatedFunctions.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeTabulatedFunctions.dir/TestSerializeTabulatedFunctions.cpp.o -o ../../TestSerializeTabulatedFunctions -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread In file included from /usr/include/CL/cl.h:20, from /build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include/vkFFT.h:57, from /build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/./include/OpenCLFFT3D.h:35, from /build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src/OpenCLFFT3D.cpp:27: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 87%] Linking CXX executable ../TestVectorizeAvx make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestVectorizeAvx.dir/link.txt --verbose=1 [ 87%] Built target TestSerializeTabulatedFunctions /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestVectorizeAvx.dir/TestVectorizeAvx.cpp.o -o ../TestVectorizeAvx -Wl,-rpath,"\$ORIGIN" ../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 87%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuGBSAOBCForce.cpp.o [ 87%] Built target TestSplineFitter cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuGBSAOBCForce.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuGBSAOBCForce.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuGBSAOBCForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src/CpuGBSAOBCForce.cpp [ 87%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuGayBerneForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuGayBerneForce.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuGayBerneForce.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuGayBerneForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src/CpuGayBerneForce.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 87%] Built target TestVectorizeAvx [ 87%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLIntegrationUtilities.cpp.o [ 87%] Building CXX object plugins/drude/platforms/reference/CMakeFiles/OpenMMDrudeReference.dir/src/ReferenceDrudeKernels.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLIntegrationUtilities.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLIntegrationUtilities.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLIntegrationUtilities.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src/OpenCLIntegrationUtilities.cpp [ 87%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernel.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernel.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernel.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernel.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src/OpenCLKernel.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMDrudeReference_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/drude/platforms/reference/CMakeFiles/OpenMMDrudeReference.dir/src/ReferenceDrudeKernels.cpp.o -MF CMakeFiles/OpenMMDrudeReference.dir/src/ReferenceDrudeKernels.cpp.o.d -o CMakeFiles/OpenMMDrudeReference.dir/src/ReferenceDrudeKernels.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/reference/src/ReferenceDrudeKernels.cpp [ 87%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuKernelFactory.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuKernelFactory.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuKernelFactory.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuKernelFactory.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src/CpuKernelFactory.cpp [ 87%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuKernels.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuKernels.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuKernels.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuKernels.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src/CpuKernels.cpp [ 87%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernelFactory.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernelFactory.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernelFactory.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernelFactory.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src/OpenCLKernelFactory.cpp [ 87%] Linking CXX executable ../TestParser cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestParser.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestParser.dir/TestParser.cpp.o -o ../TestParser -Wl,-rpath,"\$ORIGIN" ../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 87%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuLangevinDynamics.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuLangevinDynamics.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuLangevinDynamics.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuLangevinDynamics.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src/CpuLangevinDynamics.cpp [ 87%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernels.cpp.o [ 87%] Linking CXX shared library ../../libOpenMMAmoeba.so cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include 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-I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernels.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernels.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernels.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src/OpenCLKernels.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMMAmoeba.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,-z,relro -Wl,--as-needed -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libOpenMMAmoeba.so -o ../../libOpenMMAmoeba.so CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaGeneralizedKirkwoodForce.cpp.o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaGeneralizedKirkwoodForceImpl.cpp.o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaMultipoleForce.cpp.o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaMultipoleForceImpl.cpp.o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaTorsionTorsionForce.cpp.o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaTorsionTorsionForceImpl.cpp.o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaVdwForce.cpp.o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaVdwForceImpl.cpp.o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaWcaDispersionForce.cpp.o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaWcaDispersionForceImpl.cpp.o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/HippoNonbondedForce.cpp.o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/HippoNonbondedForceImpl.cpp.o CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaGeneralizedKirkwoodForceProxy.cpp.o CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaMultipoleForceProxy.cpp.o CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaSerializationProxyRegistration.cpp.o CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaTorsionTorsionForceProxy.cpp.o CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaVdwForceProxy.cpp.o CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaWcaDispersionForceProxy.cpp.o CMakeFiles/OpenMMAmoeba.dir/serialization/src/HippoNonbondedForceProxy.cpp.o -Wl,-rpath,"\$ORIGIN:" /usr/lib/x86_64-linux-gnu/libdl.a ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 87%] Built target TestParser [ 87%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuLangevinMiddleDynamics.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 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-I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuLangevinMiddleDynamics.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuLangevinMiddleDynamics.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuLangevinMiddleDynamics.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src/CpuLangevinMiddleDynamics.cpp [ 87%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuNeighborList.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuNeighborList.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuNeighborList.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuNeighborList.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src/CpuNeighborList.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 87%] Built target OpenMMAmoeba [ 89%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForce.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForce.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src/CpuNonbondedForce.cpp [ 89%] Linking CXX executable ../TestVectorize cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestVectorize.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestVectorize.dir/TestVectorize.cpp.o -o ../TestVectorize -Wl,-rpath,"\$ORIGIN" ../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 89%] Built target TestVectorize make -f plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/build.make plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/build.make plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 89%] Building CXX object plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/AmoebaReferenceKernelFactory.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoebaReference_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/AmoebaReferenceKernelFactory.cpp.o -MF CMakeFiles/OpenMMAmoebaReference.dir/src/AmoebaReferenceKernelFactory.cpp.o.d -o CMakeFiles/OpenMMAmoebaReference.dir/src/AmoebaReferenceKernelFactory.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src/AmoebaReferenceKernelFactory.cpp [ 89%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceAvx.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -mavx -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceAvx.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceAvx.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceAvx.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src/CpuNonbondedForceAvx.cpp [ 91%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLNonbondedUtilities.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLNonbondedUtilities.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLNonbondedUtilities.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLNonbondedUtilities.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src/OpenCLNonbondedUtilities.cpp [ 91%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceAvx2.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -mavx2 -mfma -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceAvx2.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceAvx2.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceAvx2.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src/CpuNonbondedForceAvx2.cpp [ 91%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLParallelKernels.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLParallelKernels.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLParallelKernels.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLParallelKernels.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src/OpenCLParallelKernels.cpp [ 91%] Linking CXX shared library ../../../../libOpenMMDrudeReference.so cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMMDrudeReference.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,-z,relro -Wl,--as-needed -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libOpenMMDrudeReference.so -o ../../../../libOpenMMDrudeReference.so CMakeFiles/OpenMMDrudeReference.dir/src/ReferenceDrudeKernelFactory.cpp.o CMakeFiles/OpenMMDrudeReference.dir/src/ReferenceDrudeKernels.cpp.o -Wl,-rpath,"\$ORIGIN:" ../../../../libOpenMMDrude.so ../../../../libOpenMM.so.8.1 -lpthread /usr/lib/x86_64-linux-gnu/libdl.a make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 91%] Building CXX object plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/AmoebaReferenceKernels.cpp.o [ 91%] Built target OpenMMDrudeReference cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoebaReference_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/AmoebaReferenceKernels.cpp.o -MF CMakeFiles/OpenMMAmoebaReference.dir/src/AmoebaReferenceKernels.cpp.o.d -o CMakeFiles/OpenMMAmoebaReference.dir/src/AmoebaReferenceKernels.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src/AmoebaReferenceKernels.cpp [ 91%] Building CXX object plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoebaReference_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceForce.cpp.o -MF CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceForce.cpp.o.d -o CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference/AmoebaReferenceForce.cpp [ 91%] Building CXX object plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceGeneralizedKirkwoodForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoebaReference_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceGeneralizedKirkwoodForce.cpp.o -MF CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceGeneralizedKirkwoodForce.cpp.o.d -o CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceGeneralizedKirkwoodForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference/AmoebaReferenceGeneralizedKirkwoodForce.cpp [ 91%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceFvec.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceFvec.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceFvec.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceFvec.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src/CpuNonbondedForceFvec.cpp [ 93%] Building CXX object plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceHippoNonbondedForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoebaReference_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceHippoNonbondedForce.cpp.o -MF CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceHippoNonbondedForce.cpp.o.d -o CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceHippoNonbondedForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference/AmoebaReferenceHippoNonbondedForce.cpp [ 93%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLParameterSet.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLParameterSet.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLParameterSet.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLParameterSet.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src/OpenCLParameterSet.cpp [ 93%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceVec4.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceVec4.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceVec4.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceVec4.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src/CpuNonbondedForceVec4.cpp [ 93%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuPlatform.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuPlatform.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuPlatform.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuPlatform.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src/CpuPlatform.cpp [ 93%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuRandom.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuRandom.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuRandom.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuRandom.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src/CpuRandom.cpp [ 93%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuSETTLE.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuSETTLE.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuSETTLE.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuSETTLE.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src/CpuSETTLE.cpp make -f plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeForce.dir/build.make plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeForce.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeForce.dir/build.make plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 93%] Building CXX object plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeForce.dir/TestReferenceDrudeForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeForce.dir/TestReferenceDrudeForce.cpp.o -MF CMakeFiles/TestReferenceDrudeForce.dir/TestReferenceDrudeForce.cpp.o.d -o CMakeFiles/TestReferenceDrudeForce.dir/TestReferenceDrudeForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/reference/tests/TestReferenceDrudeForce.cpp make -f plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeLangevinIntegrator.dir/build.make plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeLangevinIntegrator.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeLangevinIntegrator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeLangevinIntegrator.dir/build.make plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeLangevinIntegrator.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 93%] Building CXX object plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeLangevinIntegrator.dir/TestReferenceDrudeLangevinIntegrator.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeLangevinIntegrator.dir/TestReferenceDrudeLangevinIntegrator.cpp.o -MF CMakeFiles/TestReferenceDrudeLangevinIntegrator.dir/TestReferenceDrudeLangevinIntegrator.cpp.o.d -o CMakeFiles/TestReferenceDrudeLangevinIntegrator.dir/TestReferenceDrudeLangevinIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/reference/tests/TestReferenceDrudeLangevinIntegrator.cpp [ 93%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLPlatform.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLPlatform.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLPlatform.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLPlatform.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src/OpenCLPlatform.cpp [ 93%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLProgram.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLProgram.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLProgram.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLProgram.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src/OpenCLProgram.cpp [ 93%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLSort.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLSort.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLSort.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLSort.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src/OpenCLSort.cpp [ 93%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/CommonKernels.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/CommonKernels.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/CommonKernels.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/CommonKernels.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/common/src/CommonKernels.cpp [ 93%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeArray.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeArray.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeArray.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeArray.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/common/src/ComputeArray.cpp [ 93%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeContext.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeContext.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeContext.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeContext.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/common/src/ComputeContext.cpp [ 93%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeForceInfo.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeForceInfo.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeForceInfo.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeForceInfo.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/common/src/ComputeForceInfo.cpp [ 93%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeParameterSet.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeParameterSet.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeParameterSet.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeParameterSet.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/common/src/ComputeParameterSet.cpp [ 93%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ExpressionUtilities.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ExpressionUtilities.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ExpressionUtilities.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ExpressionUtilities.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/common/src/ExpressionUtilities.cpp [ 93%] Building CXX object plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceMultipoleForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoebaReference_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceMultipoleForce.cpp.o -MF CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceMultipoleForce.cpp.o.d -o CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceMultipoleForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference/AmoebaReferenceMultipoleForce.cpp [ 93%] Linking CXX executable ../../../../../TestReferenceDrudeForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceDrudeForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceDrudeForce.dir/TestReferenceDrudeForce.cpp.o -o ../../../../../TestReferenceDrudeForce -Wl,-rpath,"\$ORIGIN" ../../../../../libOpenMMDrudeReference.so ../../../../../libOpenMMDrude.so ../../../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 93%] Building CXX object plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceTorsionTorsionForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoebaReference_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceTorsionTorsionForce.cpp.o -MF CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceTorsionTorsionForce.cpp.o.d -o CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceTorsionTorsionForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference/AmoebaReferenceTorsionTorsionForce.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 93%] Built target TestReferenceDrudeForce make -f plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeNoseHoover.dir/build.make plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeNoseHoover.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeNoseHoover.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeNoseHoover.dir/build.make plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeNoseHoover.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 93%] Building CXX object plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeNoseHoover.dir/TestReferenceDrudeNoseHoover.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeNoseHoover.dir/TestReferenceDrudeNoseHoover.cpp.o -MF CMakeFiles/TestReferenceDrudeNoseHoover.dir/TestReferenceDrudeNoseHoover.cpp.o.d -o CMakeFiles/TestReferenceDrudeNoseHoover.dir/TestReferenceDrudeNoseHoover.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/reference/tests/TestReferenceDrudeNoseHoover.cpp [ 93%] Linking CXX executable ../../../../../TestReferenceDrudeLangevinIntegrator cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceDrudeLangevinIntegrator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceDrudeLangevinIntegrator.dir/TestReferenceDrudeLangevinIntegrator.cpp.o -o ../../../../../TestReferenceDrudeLangevinIntegrator -Wl,-rpath,"\$ORIGIN" ../../../../../libOpenMMDrudeReference.so ../../../../../libOpenMMDrude.so ../../../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 93%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/IntegrationUtilities.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/IntegrationUtilities.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/IntegrationUtilities.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/IntegrationUtilities.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/common/src/IntegrationUtilities.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 93%] Building CXX object plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceVdwForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoebaReference_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceVdwForce.cpp.o -MF CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceVdwForce.cpp.o.d -o CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceVdwForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference/AmoebaReferenceVdwForce.cpp [ 93%] Built target TestReferenceDrudeLangevinIntegrator make -f plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeSCFIntegrator.dir/build.make plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeSCFIntegrator.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeSCFIntegrator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeSCFIntegrator.dir/build.make plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeSCFIntegrator.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 93%] Building CXX object plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeSCFIntegrator.dir/TestReferenceDrudeSCFIntegrator.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeSCFIntegrator.dir/TestReferenceDrudeSCFIntegrator.cpp.o -MF CMakeFiles/TestReferenceDrudeSCFIntegrator.dir/TestReferenceDrudeSCFIntegrator.cpp.o.d -o CMakeFiles/TestReferenceDrudeSCFIntegrator.dir/TestReferenceDrudeSCFIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/reference/tests/TestReferenceDrudeSCFIntegrator.cpp [ 93%] Linking CXX shared library ../../libOpenMMPME.so cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/cpupme && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMMPME.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,-z,relro -Wl,--as-needed -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libOpenMMPME.so -o ../../libOpenMMPME.so CMakeFiles/OpenMMPME.dir/src/CpuPmeKernelFactory.cpp.o CMakeFiles/OpenMMPME.dir/src/CpuPmeKernels.cpp.o -Wl,-rpath,"\$ORIGIN:" ../../libOpenMM.so.8.1 -lpthread /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 93%] Built target OpenMMPME make -f plugins/cpupme/tests/CMakeFiles/TestCpuPme.dir/build.make plugins/cpupme/tests/CMakeFiles/TestCpuPme.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/plugins/cpupme/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/cpupme/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/cpupme/tests/CMakeFiles/TestCpuPme.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/cpupme/tests/CMakeFiles/TestCpuPme.dir/build.make plugins/cpupme/tests/CMakeFiles/TestCpuPme.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 93%] Building CXX object plugins/cpupme/tests/CMakeFiles/TestCpuPme.dir/TestCpuPme.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/cpupme/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/cpupme/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/cpupme/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/include/pocketfft -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT plugins/cpupme/tests/CMakeFiles/TestCpuPme.dir/TestCpuPme.cpp.o -MF CMakeFiles/TestCpuPme.dir/TestCpuPme.cpp.o.d -o CMakeFiles/TestCpuPme.dir/TestCpuPme.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/cpupme/tests/TestCpuPme.cpp [ 93%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernelSources.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernelSources.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernelSources.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernelSources.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src/OpenCLKernelSources.cpp [ 93%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/CommonKernelSources.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/CommonKernelSources.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/CommonKernelSources.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/CommonKernelSources.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/common/src/CommonKernelSources.cpp [ 93%] Building CXX object plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceWcaDispersionForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoebaReference_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceWcaDispersionForce.cpp.o -MF CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceWcaDispersionForce.cpp.o.d -o CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceWcaDispersionForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference/AmoebaReferenceWcaDispersionForce.cpp [ 93%] Linking CXX executable ../../../../../TestReferenceDrudeSCFIntegrator cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceDrudeSCFIntegrator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceDrudeSCFIntegrator.dir/TestReferenceDrudeSCFIntegrator.cpp.o -o ../../../../../TestReferenceDrudeSCFIntegrator -Wl,-rpath,"\$ORIGIN" ../../../../../libOpenMMDrudeReference.so ../../../../../libOpenMMDrude.so ../../../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 93%] Linking CXX executable ../../../../../TestReferenceDrudeNoseHoover cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceDrudeNoseHoover.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceDrudeNoseHoover.dir/TestReferenceDrudeNoseHoover.cpp.o -o ../../../../../TestReferenceDrudeNoseHoover -Wl,-rpath,"\$ORIGIN" ../../../../../libOpenMMDrudeReference.so ../../../../../libOpenMMDrude.so ../../../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 93%] Built target TestReferenceDrudeSCFIntegrator make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 93%] Built target TestReferenceDrudeNoseHoover [ 93%] Linking CXX shared library ../../../../libOpenMMRPMDReference.so cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/reference && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMMRPMDReference.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,-z,relro -Wl,--as-needed -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libOpenMMRPMDReference.so -o ../../../../libOpenMMRPMDReference.so CMakeFiles/OpenMMRPMDReference.dir/src/ReferenceRpmdKernelFactory.cpp.o CMakeFiles/OpenMMRPMDReference.dir/src/ReferenceRpmdKernels.cpp.o -Wl,-rpath,"\$ORIGIN:" ../../../../libOpenMMRPMD.so ../../../../libOpenMM.so.8.1 -lpthread /usr/lib/x86_64-linux-gnu/libdl.a [ 93%] Linking CXX executable ../../../TestCpuPme cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/cpupme/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuPme.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestCpuPme.dir/TestCpuPme.cpp.o -o ../../../TestCpuPme -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMPME.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 93%] Built target OpenMMRPMDReference make -f plugins/rpmd/platforms/reference/tests/CMakeFiles/TestReferenceRpmd.dir/build.make plugins/rpmd/platforms/reference/tests/CMakeFiles/TestReferenceRpmd.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/reference/tests/CMakeFiles/TestReferenceRpmd.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/rpmd/platforms/reference/tests/CMakeFiles/TestReferenceRpmd.dir/build.make plugins/rpmd/platforms/reference/tests/CMakeFiles/TestReferenceRpmd.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 93%] Building CXX object plugins/rpmd/platforms/reference/tests/CMakeFiles/TestReferenceRpmd.dir/TestReferenceRpmd.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT plugins/rpmd/platforms/reference/tests/CMakeFiles/TestReferenceRpmd.dir/TestReferenceRpmd.cpp.o -MF CMakeFiles/TestReferenceRpmd.dir/TestReferenceRpmd.cpp.o.d -o CMakeFiles/TestReferenceRpmd.dir/TestReferenceRpmd.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/reference/tests/TestReferenceRpmd.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 93%] Built target TestCpuPme [ 93%] Linking CXX shared library ../../../libOpenMMCPU.so cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMMCPU.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,-z,relro -Wl,--as-needed -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libOpenMMCPU.so -o ../../../libOpenMMCPU.so CMakeFiles/OpenMMCPU.dir/__/src/CpuBondForce.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomGBForce.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomManyParticleForce.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForce.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForceAvx.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForceFvec.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForceVec4.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuGBSAOBCForce.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuGayBerneForce.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuKernelFactory.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuKernels.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuLangevinDynamics.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuLangevinMiddleDynamics.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuNeighborList.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForce.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceAvx.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceAvx2.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceFvec.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceVec4.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuPlatform.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuRandom.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuSETTLE.cpp.o -Wl,-rpath,"\$ORIGIN:" ../../../libOpenMM.so.8.1 -lpthread /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 93%] Built target OpenMMCPU make -f platforms/cpu/tests/CMakeFiles/TestCpuCheckpoints.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuCheckpoints.dir/depend make -f platforms/cpu/tests/CMakeFiles/TestCpuCompoundIntegrator.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuCompoundIntegrator.dir/depend make -f platforms/cpu/tests/CMakeFiles/TestCpuCustomCPPForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuCustomCPPForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuCheckpoints.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuCompoundIntegrator.dir/DependInfo.cmake "--color=" make -f platforms/cpu/tests/CMakeFiles/TestCpuCustomGBForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuCustomGBForce.dir/depend make -f platforms/cpu/tests/CMakeFiles/TestCpuCustomManyParticleForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuCustomManyParticleForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuCustomCPPForce.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuCustomGBForce.dir/DependInfo.cmake "--color=" make -f platforms/cpu/tests/CMakeFiles/TestCpuCustomNonbondedForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuCustomNonbondedForce.dir/depend make -f platforms/cpu/tests/CMakeFiles/TestCpuDispersionPME.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuDispersionPME.dir/depend make -f platforms/cpu/tests/CMakeFiles/TestCpuEwald.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuEwald.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuCustomManyParticleForce.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuCustomNonbondedForce.dir/DependInfo.cmake "--color=" make -f platforms/cpu/tests/CMakeFiles/TestCpuGBSAOBCForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuGBSAOBCForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuDispersionPME.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/cpu/tests/CMakeFiles/TestCpuGayBerneForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuGayBerneForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuEwald.dir/DependInfo.cmake "--color=" make -f platforms/cpu/tests/CMakeFiles/TestCpuCompoundIntegrator.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuCompoundIntegrator.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuGBSAOBCForce.dir/DependInfo.cmake "--color=" make -f platforms/cpu/tests/CMakeFiles/TestCpuHarmonicAngleForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuHarmonicAngleForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuGayBerneForce.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/cpu/tests/CMakeFiles/TestCpuCheckpoints.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuCheckpoints.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuHarmonicAngleForce.dir/DependInfo.cmake "--color=" make -f platforms/cpu/tests/CMakeFiles/TestCpuCustomCPPForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuCustomCPPForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/cpu/tests/CMakeFiles/TestCpuCustomManyParticleForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuCustomManyParticleForce.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/cpu/tests/CMakeFiles/TestCpuCustomGBForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuCustomGBForce.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/cpu/tests/CMakeFiles/TestCpuCustomNonbondedForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuCustomNonbondedForce.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/cpu/tests/CMakeFiles/TestCpuGBSAOBCForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuGBSAOBCForce.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/cpu/tests/CMakeFiles/TestCpuEwald.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuEwald.dir/build [ 93%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuCheckpoints.dir/TestCpuCheckpoints.cpp.o make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuCheckpoints.dir/TestCpuCheckpoints.cpp.o -MF CMakeFiles/TestCpuCheckpoints.dir/TestCpuCheckpoints.cpp.o.d -o CMakeFiles/TestCpuCheckpoints.dir/TestCpuCheckpoints.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests/TestCpuCheckpoints.cpp make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/cpu/tests/CMakeFiles/TestCpuDispersionPME.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuDispersionPME.dir/build [ 93%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuCustomCPPForce.dir/TestCpuCustomCPPForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuCustomCPPForce.dir/TestCpuCustomCPPForce.cpp.o -MF CMakeFiles/TestCpuCustomCPPForce.dir/TestCpuCustomCPPForce.cpp.o.d -o CMakeFiles/TestCpuCustomCPPForce.dir/TestCpuCustomCPPForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests/TestCpuCustomCPPForce.cpp [ 93%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuCompoundIntegrator.dir/TestCpuCompoundIntegrator.cpp.o make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/cpu/tests/CMakeFiles/TestCpuLangevinIntegrator.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuLangevinIntegrator.dir/depend make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuCompoundIntegrator.dir/TestCpuCompoundIntegrator.cpp.o -MF CMakeFiles/TestCpuCompoundIntegrator.dir/TestCpuCompoundIntegrator.cpp.o.d -o CMakeFiles/TestCpuCompoundIntegrator.dir/TestCpuCompoundIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests/TestCpuCompoundIntegrator.cpp make -f platforms/cpu/tests/CMakeFiles/TestCpuHarmonicAngleForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuHarmonicAngleForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuLangevinIntegrator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/cpu/tests/CMakeFiles/TestCpuGayBerneForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuGayBerneForce.dir/build [ 93%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuCustomManyParticleForce.dir/TestCpuCustomManyParticleForce.cpp.o make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuCustomManyParticleForce.dir/TestCpuCustomManyParticleForce.cpp.o -MF CMakeFiles/TestCpuCustomManyParticleForce.dir/TestCpuCustomManyParticleForce.cpp.o.d -o CMakeFiles/TestCpuCustomManyParticleForce.dir/TestCpuCustomManyParticleForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests/TestCpuCustomManyParticleForce.cpp [ 93%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuCustomGBForce.dir/TestCpuCustomGBForce.cpp.o [ 93%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuCustomNonbondedForce.dir/TestCpuCustomNonbondedForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuCustomNonbondedForce.dir/TestCpuCustomNonbondedForce.cpp.o -MF CMakeFiles/TestCpuCustomNonbondedForce.dir/TestCpuCustomNonbondedForce.cpp.o.d -o CMakeFiles/TestCpuCustomNonbondedForce.dir/TestCpuCustomNonbondedForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests/TestCpuCustomNonbondedForce.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuCustomGBForce.dir/TestCpuCustomGBForce.cpp.o -MF CMakeFiles/TestCpuCustomGBForce.dir/TestCpuCustomGBForce.cpp.o.d -o CMakeFiles/TestCpuCustomGBForce.dir/TestCpuCustomGBForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests/TestCpuCustomGBForce.cpp [ 93%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuEwald.dir/TestCpuEwald.cpp.o [ 93%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuDispersionPME.dir/TestCpuDispersionPME.cpp.o [ 93%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuGBSAOBCForce.dir/TestCpuGBSAOBCForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuDispersionPME.dir/TestCpuDispersionPME.cpp.o -MF CMakeFiles/TestCpuDispersionPME.dir/TestCpuDispersionPME.cpp.o.d -o CMakeFiles/TestCpuDispersionPME.dir/TestCpuDispersionPME.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests/TestCpuDispersionPME.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuEwald.dir/TestCpuEwald.cpp.o -MF CMakeFiles/TestCpuEwald.dir/TestCpuEwald.cpp.o.d -o CMakeFiles/TestCpuEwald.dir/TestCpuEwald.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests/TestCpuEwald.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuGBSAOBCForce.dir/TestCpuGBSAOBCForce.cpp.o -MF CMakeFiles/TestCpuGBSAOBCForce.dir/TestCpuGBSAOBCForce.cpp.o.d -o CMakeFiles/TestCpuGBSAOBCForce.dir/TestCpuGBSAOBCForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests/TestCpuGBSAOBCForce.cpp [ 93%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuHarmonicAngleForce.dir/TestCpuHarmonicAngleForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuHarmonicAngleForce.dir/TestCpuHarmonicAngleForce.cpp.o -MF CMakeFiles/TestCpuHarmonicAngleForce.dir/TestCpuHarmonicAngleForce.cpp.o.d -o CMakeFiles/TestCpuHarmonicAngleForce.dir/TestCpuHarmonicAngleForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests/TestCpuHarmonicAngleForce.cpp [ 93%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuGayBerneForce.dir/TestCpuGayBerneForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuGayBerneForce.dir/TestCpuGayBerneForce.cpp.o -MF CMakeFiles/TestCpuGayBerneForce.dir/TestCpuGayBerneForce.cpp.o.d -o CMakeFiles/TestCpuGayBerneForce.dir/TestCpuGayBerneForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests/TestCpuGayBerneForce.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/cpu/tests/CMakeFiles/TestCpuLangevinIntegrator.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuLangevinIntegrator.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 93%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuLangevinIntegrator.dir/TestCpuLangevinIntegrator.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuLangevinIntegrator.dir/TestCpuLangevinIntegrator.cpp.o -MF CMakeFiles/TestCpuLangevinIntegrator.dir/TestCpuLangevinIntegrator.cpp.o.d -o CMakeFiles/TestCpuLangevinIntegrator.dir/TestCpuLangevinIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests/TestCpuLangevinIntegrator.cpp make -f platforms/cpu/tests/CMakeFiles/TestCpuLangevinMiddleIntegrator.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuLangevinMiddleIntegrator.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuLangevinMiddleIntegrator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/cpu/tests/CMakeFiles/TestCpuLangevinMiddleIntegrator.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuLangevinMiddleIntegrator.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 93%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuLangevinMiddleIntegrator.dir/TestCpuLangevinMiddleIntegrator.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuLangevinMiddleIntegrator.dir/TestCpuLangevinMiddleIntegrator.cpp.o -MF CMakeFiles/TestCpuLangevinMiddleIntegrator.dir/TestCpuLangevinMiddleIntegrator.cpp.o.d -o CMakeFiles/TestCpuLangevinMiddleIntegrator.dir/TestCpuLangevinMiddleIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests/TestCpuLangevinMiddleIntegrator.cpp [ 93%] Linking CXX executable ../../../../../TestReferenceRpmd cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceRpmd.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceRpmd.dir/TestReferenceRpmd.cpp.o -o ../../../../../TestReferenceRpmd -Wl,-rpath,"\$ORIGIN" ../../../../../libOpenMMRPMDReference.so ../../../../../libOpenMMRPMD.so ../../../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 93%] Built target TestReferenceRpmd make -f platforms/cpu/tests/CMakeFiles/TestCpuNeighborList.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuNeighborList.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuNeighborList.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/cpu/tests/CMakeFiles/TestCpuNeighborList.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuNeighborList.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 93%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuNeighborList.dir/TestCpuNeighborList.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuNeighborList.dir/TestCpuNeighborList.cpp.o -MF CMakeFiles/TestCpuNeighborList.dir/TestCpuNeighborList.cpp.o.d -o CMakeFiles/TestCpuNeighborList.dir/TestCpuNeighborList.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests/TestCpuNeighborList.cpp [ 93%] Linking CXX executable ../../../TestCpuCustomCPPForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuCustomCPPForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestCpuCustomCPPForce.dir/TestCpuCustomCPPForce.cpp.o -o ../../../TestCpuCustomCPPForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 93%] Built target TestCpuCustomCPPForce make -f platforms/cpu/tests/CMakeFiles/TestCpuNonbondedForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuNonbondedForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuNonbondedForce.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/cpu/tests/CMakeFiles/TestCpuNonbondedForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuNonbondedForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 95%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuNonbondedForce.dir/TestCpuNonbondedForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuNonbondedForce.dir/TestCpuNonbondedForce.cpp.o -MF CMakeFiles/TestCpuNonbondedForce.dir/TestCpuNonbondedForce.cpp.o.d -o CMakeFiles/TestCpuNonbondedForce.dir/TestCpuNonbondedForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests/TestCpuNonbondedForce.cpp make -f platforms/cpu/tests/CMakeFiles/TestCpuPeriodicTorsionForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuPeriodicTorsionForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuPeriodicTorsionForce.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/cpu/tests/CMakeFiles/TestCpuPeriodicTorsionForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuPeriodicTorsionForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 95%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuPeriodicTorsionForce.dir/TestCpuPeriodicTorsionForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuPeriodicTorsionForce.dir/TestCpuPeriodicTorsionForce.cpp.o -MF CMakeFiles/TestCpuPeriodicTorsionForce.dir/TestCpuPeriodicTorsionForce.cpp.o.d -o CMakeFiles/TestCpuPeriodicTorsionForce.dir/TestCpuPeriodicTorsionForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests/TestCpuPeriodicTorsionForce.cpp [ 95%] Linking CXX executable ../../../TestCpuLangevinMiddleIntegrator cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuLangevinMiddleIntegrator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestCpuLangevinMiddleIntegrator.dir/TestCpuLangevinMiddleIntegrator.cpp.o -o ../../../TestCpuLangevinMiddleIntegrator -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 95%] Linking CXX executable ../../../TestCpuCheckpoints cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuCheckpoints.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestCpuCheckpoints.dir/TestCpuCheckpoints.cpp.o -o ../../../TestCpuCheckpoints -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make -f platforms/cpu/tests/CMakeFiles/TestCpuRBTorsionForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuRBTorsionForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuRBTorsionForce.dir/DependInfo.cmake "--color=" [ 95%] Linking CXX executable ../../../TestCpuNeighborList cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuNeighborList.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/cpu/tests/CMakeFiles/TestCpuRBTorsionForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuRBTorsionForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestCpuNeighborList.dir/TestCpuNeighborList.cpp.o -o ../../../TestCpuNeighborList -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 95%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuRBTorsionForce.dir/TestCpuRBTorsionForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuRBTorsionForce.dir/TestCpuRBTorsionForce.cpp.o -MF CMakeFiles/TestCpuRBTorsionForce.dir/TestCpuRBTorsionForce.cpp.o.d -o CMakeFiles/TestCpuRBTorsionForce.dir/TestCpuRBTorsionForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests/TestCpuRBTorsionForce.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 95%] Built target TestCpuLangevinMiddleIntegrator make -f platforms/cpu/tests/CMakeFiles/TestCpuSettle.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuSettle.dir/depend [ 95%] Built target TestCpuCheckpoints make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuSettle.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/cpu/tests/CMakeFiles/TestCpuSettle.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuSettle.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 95%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuSettle.dir/TestCpuSettle.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuSettle.dir/TestCpuSettle.cpp.o -MF CMakeFiles/TestCpuSettle.dir/TestCpuSettle.cpp.o.d -o CMakeFiles/TestCpuSettle.dir/TestCpuSettle.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests/TestCpuSettle.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 95%] Built target TestCpuNeighborList [ 95%] Linking CXX executable ../../../TestCpuGayBerneForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuGayBerneForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestCpuGayBerneForce.dir/TestCpuGayBerneForce.cpp.o -o ../../../TestCpuGayBerneForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 95%] Built target TestCpuGayBerneForce [ 95%] Linking CXX executable ../../../TestCpuGBSAOBCForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuGBSAOBCForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestCpuGBSAOBCForce.dir/TestCpuGBSAOBCForce.cpp.o -o ../../../TestCpuGBSAOBCForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 95%] Linking CXX executable ../../../TestCpuLangevinIntegrator cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuLangevinIntegrator.dir/link.txt --verbose=1 [ 95%] Linking CXX executable ../../../TestCpuHarmonicAngleForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuHarmonicAngleForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestCpuLangevinIntegrator.dir/TestCpuLangevinIntegrator.cpp.o -o ../../../TestCpuLangevinIntegrator -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestCpuHarmonicAngleForce.dir/TestCpuHarmonicAngleForce.cpp.o -o ../../../TestCpuHarmonicAngleForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 95%] Built target TestCpuGBSAOBCForce make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 95%] Built target TestCpuHarmonicAngleForce make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 95%] Built target TestCpuLangevinIntegrator [ 95%] Linking CXX executable ../../../TestCpuPeriodicTorsionForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuPeriodicTorsionForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestCpuPeriodicTorsionForce.dir/TestCpuPeriodicTorsionForce.cpp.o -o ../../../TestCpuPeriodicTorsionForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 95%] Built target TestCpuPeriodicTorsionForce [ 95%] Linking CXX executable ../../../TestCpuCompoundIntegrator cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuCompoundIntegrator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestCpuCompoundIntegrator.dir/TestCpuCompoundIntegrator.cpp.o -o ../../../TestCpuCompoundIntegrator -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 95%] Linking CXX executable ../../../TestCpuSettle cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuSettle.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestCpuSettle.dir/TestCpuSettle.cpp.o -o ../../../TestCpuSettle -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 95%] Built target TestCpuCompoundIntegrator make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 95%] Built target TestCpuSettle [ 97%] Linking CXX executable ../../../TestCpuCustomManyParticleForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuCustomManyParticleForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestCpuCustomManyParticleForce.dir/TestCpuCustomManyParticleForce.cpp.o -o ../../../TestCpuCustomManyParticleForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 97%] Linking CXX executable ../../../TestCpuCustomGBForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuCustomGBForce.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 97%] Built target TestCpuCustomManyParticleForce /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestCpuCustomGBForce.dir/TestCpuCustomGBForce.cpp.o -o ../../../TestCpuCustomGBForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 97%] Built target TestCpuCustomGBForce [ 97%] Linking CXX executable ../../../TestCpuRBTorsionForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuRBTorsionForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestCpuRBTorsionForce.dir/TestCpuRBTorsionForce.cpp.o -o ../../../TestCpuRBTorsionForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 97%] Built target TestCpuRBTorsionForce [ 97%] Linking CXX executable ../../../TestCpuNonbondedForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuNonbondedForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestCpuNonbondedForce.dir/TestCpuNonbondedForce.cpp.o -o ../../../TestCpuNonbondedForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 97%] Built target TestCpuNonbondedForce [ 97%] Linking CXX executable ../../../TestCpuDispersionPME cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuDispersionPME.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestCpuDispersionPME.dir/TestCpuDispersionPME.cpp.o -o ../../../TestCpuDispersionPME -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 97%] Built target TestCpuDispersionPME [ 97%] Linking CXX executable ../../../TestCpuCustomNonbondedForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuCustomNonbondedForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestCpuCustomNonbondedForce.dir/TestCpuCustomNonbondedForce.cpp.o -o ../../../TestCpuCustomNonbondedForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 97%] Built target TestCpuCustomNonbondedForce [ 97%] Linking CXX shared library ../../../../libOpenMMAmoebaReference.so cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMMAmoebaReference.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,-z,relro -Wl,--as-needed -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libOpenMMAmoebaReference.so -o ../../../../libOpenMMAmoebaReference.so CMakeFiles/OpenMMAmoebaReference.dir/src/AmoebaReferenceKernelFactory.cpp.o CMakeFiles/OpenMMAmoebaReference.dir/src/AmoebaReferenceKernels.cpp.o CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceForce.cpp.o CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceGeneralizedKirkwoodForce.cpp.o CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceHippoNonbondedForce.cpp.o CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceMultipoleForce.cpp.o CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceTorsionTorsionForce.cpp.o CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceVdwForce.cpp.o CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceWcaDispersionForce.cpp.o -Wl,-rpath,"\$ORIGIN:" ../../../../libOpenMMAmoeba.so ../../../../libOpenMM.so.8.1 -lpthread /usr/lib/x86_64-linux-gnu/libdl.a make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 97%] Built target OpenMMAmoebaReference make -f plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaExtrapolatedPolarization.dir/build.make plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaExtrapolatedPolarization.dir/depend make -f plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaGeneralizedKirkwoodForce.dir/build.make plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaGeneralizedKirkwoodForce.dir/depend make -f plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaMultipoleForce.dir/build.make plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaMultipoleForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaExtrapolatedPolarization.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaGeneralizedKirkwoodForce.dir/DependInfo.cmake "--color=" make -f plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaTorsionTorsionForce.dir/build.make plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaTorsionTorsionForce.dir/depend make -f plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaVdwForce.dir/build.make plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaVdwForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaMultipoleForce.dir/DependInfo.cmake "--color=" make -f plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceHippoNonbondedForce.dir/build.make plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceHippoNonbondedForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaTorsionTorsionForce.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaVdwForce.dir/DependInfo.cmake "--color=" make -f plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceWcaDispersionForce.dir/build.make plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceWcaDispersionForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceHippoNonbondedForce.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceWcaDispersionForce.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaExtrapolatedPolarization.dir/build.make plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaExtrapolatedPolarization.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaMultipoleForce.dir/build.make plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaMultipoleForce.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaGeneralizedKirkwoodForce.dir/build.make plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaGeneralizedKirkwoodForce.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceHippoNonbondedForce.dir/build.make plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceHippoNonbondedForce.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaTorsionTorsionForce.dir/build.make plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaTorsionTorsionForce.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaVdwForce.dir/build.make plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaVdwForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceWcaDispersionForce.dir/build.make plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceWcaDispersionForce.dir/build [100%] Building CXX object plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaExtrapolatedPolarization.dir/TestReferenceAmoebaExtrapolatedPolarization.cpp.o [100%] Building CXX object plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaMultipoleForce.dir/TestReferenceAmoebaMultipoleForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaMultipoleForce.dir/TestReferenceAmoebaMultipoleForce.cpp.o -MF CMakeFiles/TestReferenceAmoebaMultipoleForce.dir/TestReferenceAmoebaMultipoleForce.cpp.o.d -o CMakeFiles/TestReferenceAmoebaMultipoleForce.dir/TestReferenceAmoebaMultipoleForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/tests/TestReferenceAmoebaMultipoleForce.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaExtrapolatedPolarization.dir/TestReferenceAmoebaExtrapolatedPolarization.cpp.o -MF CMakeFiles/TestReferenceAmoebaExtrapolatedPolarization.dir/TestReferenceAmoebaExtrapolatedPolarization.cpp.o.d -o CMakeFiles/TestReferenceAmoebaExtrapolatedPolarization.dir/TestReferenceAmoebaExtrapolatedPolarization.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/tests/TestReferenceAmoebaExtrapolatedPolarization.cpp make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [100%] Building CXX object plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaGeneralizedKirkwoodForce.dir/TestReferenceAmoebaGeneralizedKirkwoodForce.cpp.o [100%] Building CXX object plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceHippoNonbondedForce.dir/TestReferenceHippoNonbondedForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaGeneralizedKirkwoodForce.dir/TestReferenceAmoebaGeneralizedKirkwoodForce.cpp.o -MF CMakeFiles/TestReferenceAmoebaGeneralizedKirkwoodForce.dir/TestReferenceAmoebaGeneralizedKirkwoodForce.cpp.o.d -o CMakeFiles/TestReferenceAmoebaGeneralizedKirkwoodForce.dir/TestReferenceAmoebaGeneralizedKirkwoodForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/tests/TestReferenceAmoebaGeneralizedKirkwoodForce.cpp [100%] Building CXX object plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaTorsionTorsionForce.dir/TestReferenceAmoebaTorsionTorsionForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaTorsionTorsionForce.dir/TestReferenceAmoebaTorsionTorsionForce.cpp.o -MF CMakeFiles/TestReferenceAmoebaTorsionTorsionForce.dir/TestReferenceAmoebaTorsionTorsionForce.cpp.o.d -o CMakeFiles/TestReferenceAmoebaTorsionTorsionForce.dir/TestReferenceAmoebaTorsionTorsionForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/tests/TestReferenceAmoebaTorsionTorsionForce.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceHippoNonbondedForce.dir/TestReferenceHippoNonbondedForce.cpp.o -MF CMakeFiles/TestReferenceHippoNonbondedForce.dir/TestReferenceHippoNonbondedForce.cpp.o.d -o CMakeFiles/TestReferenceHippoNonbondedForce.dir/TestReferenceHippoNonbondedForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/tests/TestReferenceHippoNonbondedForce.cpp [100%] Building CXX object plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaVdwForce.dir/TestReferenceAmoebaVdwForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaVdwForce.dir/TestReferenceAmoebaVdwForce.cpp.o -MF CMakeFiles/TestReferenceAmoebaVdwForce.dir/TestReferenceAmoebaVdwForce.cpp.o.d -o CMakeFiles/TestReferenceAmoebaVdwForce.dir/TestReferenceAmoebaVdwForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/tests/TestReferenceAmoebaVdwForce.cpp [100%] Building CXX object plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceWcaDispersionForce.dir/TestReferenceWcaDispersionForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceWcaDispersionForce.dir/TestReferenceWcaDispersionForce.cpp.o -MF CMakeFiles/TestReferenceWcaDispersionForce.dir/TestReferenceWcaDispersionForce.cpp.o.d -o CMakeFiles/TestReferenceWcaDispersionForce.dir/TestReferenceWcaDispersionForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/tests/TestReferenceWcaDispersionForce.cpp [100%] Linking CXX executable ../../../TestCpuEwald cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuEwald.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestCpuEwald.dir/TestCpuEwald.cpp.o -o ../../../TestCpuEwald -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [100%] Built target TestCpuEwald [100%] Linking CXX executable ../../../../../TestReferenceAmoebaGeneralizedKirkwoodForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceAmoebaGeneralizedKirkwoodForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceAmoebaGeneralizedKirkwoodForce.dir/TestReferenceAmoebaGeneralizedKirkwoodForce.cpp.o -o ../../../../../TestReferenceAmoebaGeneralizedKirkwoodForce -Wl,-rpath,"\$ORIGIN" ../../../../../libOpenMMAmoebaReference.so ../../../../../libOpenMMAmoeba.so ../../../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [100%] Built target TestReferenceAmoebaGeneralizedKirkwoodForce [100%] Linking CXX executable ../../../../../TestReferenceWcaDispersionForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceWcaDispersionForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceWcaDispersionForce.dir/TestReferenceWcaDispersionForce.cpp.o -o ../../../../../TestReferenceWcaDispersionForce -Wl,-rpath,"\$ORIGIN" ../../../../../libOpenMMAmoebaReference.so ../../../../../libOpenMMAmoeba.so ../../../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [100%] Built target TestReferenceWcaDispersionForce [100%] Linking CXX executable ../../../../../TestReferenceAmoebaTorsionTorsionForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceAmoebaTorsionTorsionForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceAmoebaTorsionTorsionForce.dir/TestReferenceAmoebaTorsionTorsionForce.cpp.o -o ../../../../../TestReferenceAmoebaTorsionTorsionForce -Wl,-rpath,"\$ORIGIN" ../../../../../libOpenMMAmoebaReference.so ../../../../../libOpenMMAmoeba.so ../../../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [100%] Linking CXX executable ../../../../../TestReferenceAmoebaExtrapolatedPolarization cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceAmoebaExtrapolatedPolarization.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceAmoebaExtrapolatedPolarization.dir/TestReferenceAmoebaExtrapolatedPolarization.cpp.o -o ../../../../../TestReferenceAmoebaExtrapolatedPolarization -Wl,-rpath,"\$ORIGIN" ../../../../../libOpenMMAmoebaReference.so ../../../../../libOpenMMAmoeba.so ../../../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [100%] Built target TestReferenceAmoebaTorsionTorsionForce make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [100%] Built target TestReferenceAmoebaExtrapolatedPolarization [100%] Linking CXX executable ../../../../../TestReferenceHippoNonbondedForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceHippoNonbondedForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceHippoNonbondedForce.dir/TestReferenceHippoNonbondedForce.cpp.o -o ../../../../../TestReferenceHippoNonbondedForce -Wl,-rpath,"\$ORIGIN" ../../../../../libOpenMMAmoebaReference.so ../../../../../libOpenMMAmoeba.so ../../../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [100%] Built target TestReferenceHippoNonbondedForce [100%] Linking CXX executable ../../../../../TestReferenceAmoebaVdwForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceAmoebaVdwForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceAmoebaVdwForce.dir/TestReferenceAmoebaVdwForce.cpp.o -o ../../../../../TestReferenceAmoebaVdwForce -Wl,-rpath,"\$ORIGIN" ../../../../../libOpenMMAmoebaReference.so ../../../../../libOpenMMAmoeba.so ../../../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [100%] Built target TestReferenceAmoebaVdwForce [100%] Linking CXX executable ../../../../../TestReferenceAmoebaMultipoleForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceAmoebaMultipoleForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceAmoebaMultipoleForce.dir/TestReferenceAmoebaMultipoleForce.cpp.o -o ../../../../../TestReferenceAmoebaMultipoleForce -Wl,-rpath,"\$ORIGIN" ../../../../../libOpenMMAmoebaReference.so ../../../../../libOpenMMAmoeba.so ../../../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [100%] Built target TestReferenceAmoebaMultipoleForce [100%] Linking CXX shared library ../../../libOpenMMOpenCL.so cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMMOpenCL.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,-z,relro -Wl,--as-needed -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libOpenMMOpenCL.so -o ../../../libOpenMMOpenCL.so CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLArray.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLBondedUtilities.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLCompact.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLContext.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLEvent.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLFFT3D.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLIntegrationUtilities.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernel.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernelFactory.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernels.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLNonbondedUtilities.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLParallelKernels.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLParameterSet.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLPlatform.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLProgram.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLSort.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/CommonKernels.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeArray.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeContext.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeForceInfo.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeParameterSet.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ExpressionUtilities.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/IntegrationUtilities.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernelSources.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/CommonKernelSources.cpp.o -Wl,-rpath,"\$ORIGIN:" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libOpenCL.so -lpthread /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [100%] Built target OpenMMOpenCL make -f plugins/amoeba/platforms/opencl/CMakeFiles/OpenMMAmoebaOpenCL.dir/build.make plugins/amoeba/platforms/opencl/CMakeFiles/OpenMMAmoebaOpenCL.dir/depend make -f plugins/rpmd/platforms/opencl/CMakeFiles/OpenMMRPMDOpenCL.dir/build.make plugins/rpmd/platforms/opencl/CMakeFiles/OpenMMRPMDOpenCL.dir/depend make -f plugins/drude/platforms/opencl/CMakeFiles/OpenMMDrudeOpenCL.dir/build.make plugins/drude/platforms/opencl/CMakeFiles/OpenMMDrudeOpenCL.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/opencl /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/opencl /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/opencl/CMakeFiles/OpenMMAmoebaOpenCL.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/opencl /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/opencl /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/opencl/CMakeFiles/OpenMMRPMDOpenCL.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/opencl /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/opencl /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/opencl/CMakeFiles/OpenMMDrudeOpenCL.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/amoeba/platforms/opencl/CMakeFiles/OpenMMAmoebaOpenCL.dir/build.make plugins/amoeba/platforms/opencl/CMakeFiles/OpenMMAmoebaOpenCL.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/drude/platforms/opencl/CMakeFiles/OpenMMDrudeOpenCL.dir/build.make plugins/drude/platforms/opencl/CMakeFiles/OpenMMDrudeOpenCL.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/rpmd/platforms/opencl/CMakeFiles/OpenMMRPMDOpenCL.dir/build.make plugins/rpmd/platforms/opencl/CMakeFiles/OpenMMRPMDOpenCL.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [100%] Building CXX object plugins/amoeba/platforms/opencl/CMakeFiles/OpenMMAmoebaOpenCL.dir/src/AmoebaOpenCLKernels.cpp.o [100%] Building CXX object plugins/amoeba/platforms/opencl/CMakeFiles/OpenMMAmoebaOpenCL.dir/src/AmoebaOpenCLKernelFactory.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/opencl && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoebaOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/platforms/opencl/CMakeFiles/OpenMMAmoebaOpenCL.dir/src/AmoebaOpenCLKernels.cpp.o -MF CMakeFiles/OpenMMAmoebaOpenCL.dir/src/AmoebaOpenCLKernels.cpp.o.d -o CMakeFiles/OpenMMAmoebaOpenCL.dir/src/AmoebaOpenCLKernels.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/opencl/src/AmoebaOpenCLKernels.cpp [100%] Building CXX object plugins/amoeba/platforms/opencl/CMakeFiles/OpenMMAmoebaOpenCL.dir/__/common/src/AmoebaCommonKernels.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/opencl && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoebaOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/platforms/opencl/CMakeFiles/OpenMMAmoebaOpenCL.dir/src/AmoebaOpenCLKernelFactory.cpp.o -MF CMakeFiles/OpenMMAmoebaOpenCL.dir/src/AmoebaOpenCLKernelFactory.cpp.o.d -o CMakeFiles/OpenMMAmoebaOpenCL.dir/src/AmoebaOpenCLKernelFactory.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/opencl/src/AmoebaOpenCLKernelFactory.cpp [100%] Building CXX object plugins/amoeba/platforms/opencl/CMakeFiles/OpenMMAmoebaOpenCL.dir/__/common/src/CommonAmoebaKernelSources.cpp.o [100%] Building CXX object plugins/rpmd/platforms/opencl/CMakeFiles/OpenMMRPMDOpenCL.dir/__/common/src/CommonRpmdKernels.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/opencl && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoebaOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/platforms/opencl/CMakeFiles/OpenMMAmoebaOpenCL.dir/__/common/src/AmoebaCommonKernels.cpp.o -MF CMakeFiles/OpenMMAmoebaOpenCL.dir/__/common/src/AmoebaCommonKernels.cpp.o.d -o CMakeFiles/OpenMMAmoebaOpenCL.dir/__/common/src/AmoebaCommonKernels.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/common/src/AmoebaCommonKernels.cpp [100%] Building CXX object plugins/drude/platforms/opencl/CMakeFiles/OpenMMDrudeOpenCL.dir/src/OpenCLDrudeKernelFactory.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/opencl && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMRPMDOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/rpmd/platforms/opencl/CMakeFiles/OpenMMRPMDOpenCL.dir/__/common/src/CommonRpmdKernels.cpp.o -MF CMakeFiles/OpenMMRPMDOpenCL.dir/__/common/src/CommonRpmdKernels.cpp.o.d -o CMakeFiles/OpenMMRPMDOpenCL.dir/__/common/src/CommonRpmdKernels.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/common/src/CommonRpmdKernels.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/opencl && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMDrudeOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/drude/platforms/opencl/CMakeFiles/OpenMMDrudeOpenCL.dir/src/OpenCLDrudeKernelFactory.cpp.o -MF CMakeFiles/OpenMMDrudeOpenCL.dir/src/OpenCLDrudeKernelFactory.cpp.o.d -o CMakeFiles/OpenMMDrudeOpenCL.dir/src/OpenCLDrudeKernelFactory.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/opencl/src/OpenCLDrudeKernelFactory.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/opencl && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoebaOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/platforms/opencl/CMakeFiles/OpenMMAmoebaOpenCL.dir/__/common/src/CommonAmoebaKernelSources.cpp.o -MF CMakeFiles/OpenMMAmoebaOpenCL.dir/__/common/src/CommonAmoebaKernelSources.cpp.o.d -o CMakeFiles/OpenMMAmoebaOpenCL.dir/__/common/src/CommonAmoebaKernelSources.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/common/src/CommonAmoebaKernelSources.cpp [100%] Building CXX object plugins/rpmd/platforms/opencl/CMakeFiles/OpenMMRPMDOpenCL.dir/src/OpenCLRpmdKernelFactory.cpp.o [100%] Building CXX object plugins/drude/platforms/opencl/CMakeFiles/OpenMMDrudeOpenCL.dir/__/common/src/CommonDrudeKernels.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/opencl && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMDrudeOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/drude/platforms/opencl/CMakeFiles/OpenMMDrudeOpenCL.dir/__/common/src/CommonDrudeKernels.cpp.o -MF CMakeFiles/OpenMMDrudeOpenCL.dir/__/common/src/CommonDrudeKernels.cpp.o.d -o CMakeFiles/OpenMMDrudeOpenCL.dir/__/common/src/CommonDrudeKernels.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/common/src/CommonDrudeKernels.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/opencl && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMRPMDOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/rpmd/platforms/opencl/CMakeFiles/OpenMMRPMDOpenCL.dir/src/OpenCLRpmdKernelFactory.cpp.o -MF CMakeFiles/OpenMMRPMDOpenCL.dir/src/OpenCLRpmdKernelFactory.cpp.o.d -o CMakeFiles/OpenMMRPMDOpenCL.dir/src/OpenCLRpmdKernelFactory.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/opencl/src/OpenCLRpmdKernelFactory.cpp [100%] Building CXX object plugins/drude/platforms/opencl/CMakeFiles/OpenMMDrudeOpenCL.dir/__/common/src/CommonDrudeKernelSources.cpp.o [100%] Building CXX object plugins/rpmd/platforms/opencl/CMakeFiles/OpenMMRPMDOpenCL.dir/__/common/src/CommonRpmdKernelSources.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/opencl && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMDrudeOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/drude/platforms/opencl/CMakeFiles/OpenMMDrudeOpenCL.dir/__/common/src/CommonDrudeKernelSources.cpp.o -MF CMakeFiles/OpenMMDrudeOpenCL.dir/__/common/src/CommonDrudeKernelSources.cpp.o.d -o CMakeFiles/OpenMMDrudeOpenCL.dir/__/common/src/CommonDrudeKernelSources.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/common/src/CommonDrudeKernelSources.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/opencl && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMRPMDOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/rpmd/platforms/opencl/CMakeFiles/OpenMMRPMDOpenCL.dir/__/common/src/CommonRpmdKernelSources.cpp.o -MF CMakeFiles/OpenMMRPMDOpenCL.dir/__/common/src/CommonRpmdKernelSources.cpp.o.d -o CMakeFiles/OpenMMRPMDOpenCL.dir/__/common/src/CommonRpmdKernelSources.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/common/src/CommonRpmdKernelSources.cpp [100%] Linking CXX shared library ../../../../libOpenMMDrudeOpenCL.so cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/opencl && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMMDrudeOpenCL.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,-z,relro -Wl,--as-needed -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libOpenMMDrudeOpenCL.so -o ../../../../libOpenMMDrudeOpenCL.so CMakeFiles/OpenMMDrudeOpenCL.dir/src/OpenCLDrudeKernelFactory.cpp.o CMakeFiles/OpenMMDrudeOpenCL.dir/__/common/src/CommonDrudeKernels.cpp.o CMakeFiles/OpenMMDrudeOpenCL.dir/__/common/src/CommonDrudeKernelSources.cpp.o -Wl,-rpath,"\$ORIGIN:" /usr/lib/x86_64-linux-gnu/libOpenCL.so -lpthread ../../../../libOpenMMOpenCL.so ../../../../libOpenMMDrude.so /usr/lib/x86_64-linux-gnu/libOpenCL.so ../../../../libOpenMM.so.8.1 -lpthread /usr/lib/x86_64-linux-gnu/libdl.a make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [100%] Built target OpenMMDrudeOpenCL [100%] Linking CXX shared library ../../../../libOpenMMRPMDOpenCL.so cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/opencl && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMMRPMDOpenCL.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,-z,relro -Wl,--as-needed -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libOpenMMRPMDOpenCL.so -o ../../../../libOpenMMRPMDOpenCL.so CMakeFiles/OpenMMRPMDOpenCL.dir/src/OpenCLRpmdKernelFactory.cpp.o CMakeFiles/OpenMMRPMDOpenCL.dir/__/common/src/CommonRpmdKernels.cpp.o CMakeFiles/OpenMMRPMDOpenCL.dir/__/common/src/CommonRpmdKernelSources.cpp.o -Wl,-rpath,"\$ORIGIN:" /usr/lib/x86_64-linux-gnu/libOpenCL.so -lpthread ../../../../libOpenMMOpenCL.so ../../../../libOpenMMRPMD.so /usr/lib/x86_64-linux-gnu/libOpenCL.so ../../../../libOpenMM.so.8.1 -lpthread /usr/lib/x86_64-linux-gnu/libdl.a make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [100%] Built target OpenMMRPMDOpenCL [100%] Linking CXX shared library ../../../../libOpenMMAmoebaOpenCL.so cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/opencl && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMMAmoebaOpenCL.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libOpenMMAmoebaOpenCL.so -o ../../../../libOpenMMAmoebaOpenCL.so CMakeFiles/OpenMMAmoebaOpenCL.dir/src/AmoebaOpenCLKernelFactory.cpp.o CMakeFiles/OpenMMAmoebaOpenCL.dir/src/AmoebaOpenCLKernels.cpp.o CMakeFiles/OpenMMAmoebaOpenCL.dir/__/common/src/AmoebaCommonKernels.cpp.o CMakeFiles/OpenMMAmoebaOpenCL.dir/__/common/src/CommonAmoebaKernelSources.cpp.o -Wl,-rpath,"\$ORIGIN:" -lpthread ../../../../libOpenMMOpenCL.so ../../../../libOpenMMAmoeba.so /usr/lib/x86_64-linux-gnu/libOpenCL.so ../../../../libOpenMM.so.8.1 -lpthread /usr/lib/x86_64-linux-gnu/libdl.a make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [100%] Built target OpenMMAmoebaOpenCL make[2]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' debian/rules execute_after_dh_auto_build make[1]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg' pybuild --dir obj-x86_64-linux-gnu/python --build I: pybuild base:311: /usr/bin/python3.12 setup.py build Compiling openmm/app/internal/compiled.pyx because it changed. [1/1] Cythonizing openmm/app/internal/compiled.pyx /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/xtc_utils/xtc.pyx tree = Parsing.p_module(s, pxd, full_module_name) Compiling openmm/app/internal/xtc_utils/xtc.pyx because it changed. [1/1] Cythonizing openmm/app/internal/xtc_utils/xtc.pyx author Peter Eastman data_files [] description Python wrapper for OpenMM (a C++ MD package) download_url https://openmm.org ext_modules[, , ] license Python Software Foundation License (BSD-like) long_descriptionOpenMM is a toolkit for molecular simulation. It can be used either as a stand-alone application for running simulations, or as a library you call from your own code. It provides a combination of extreme flexibility (through custom forces and integrators), openness, and high performance (especially on recent GPUs) that make it truly unique among simulation codes. name OpenMM package_data{'openmm': [], 'openmm.app': ['data/*.xml', 'data/*.pdb', 'data/amber14/*.xml', 'data/charmm36/*.xml', 'data/implicit/*.xml'], 'openmm.app.internal': []} packages['simtk', 'simtk.unit', 'simtk.openmm', 'simtk.openmm.app', 'openmm', 'openmm.unit', 'openmm', 'openmm.app', 'openmm.app.internal', 'openmm.app.internal.charmm', 'openmm.app.internal.pdbx', 'openmm.app.internal.pdbx.reader', 'openmm.app.internal.pdbx.writer'] platforms ['Linux', 'Mac OS X', 'Windows'] url https://openmm.org version 8.1.1 running build running build_py creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/simtk copying simtk/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/simtk creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/simtk/unit copying simtk/unit/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/simtk/unit creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/simtk/openmm copying simtk/openmm/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/simtk/openmm creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/simtk/openmm/app copying simtk/openmm/app/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/simtk/openmm/app creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm copying openmm/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm copying openmm/amd.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm copying openmm/openmm.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm copying openmm/version.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm copying openmm/vec3.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm copying openmm/mtsintegrator.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm copying openmm/testInstallation.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit copying openmm/unit/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit copying openmm/unit/unit.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit copying openmm/unit/constants.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit copying openmm/unit/doctests.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit copying openmm/unit/unit_operators.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit copying openmm/unit/quantity.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit copying openmm/unit/standard_dimensions.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit copying openmm/unit/basedimension.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit copying openmm/unit/mymatrix.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit copying openmm/unit/unit_definitions.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit copying openmm/unit/unit_math.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit copying openmm/unit/prefix.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit copying openmm/unit/baseunit.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/xtcfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/statedatareporter.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/xtcreporter.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/topology.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/pdbfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/amberprmtopfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/metadynamics.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/charmmpsffile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/modeller.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/pdbreporter.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/element.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/simulatedtempering.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/desmonddmsfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/amberinpcrdfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/pdbxfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/charmmcrdfiles.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/dcdreporter.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/checkpointreporter.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/dcdfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/gromacsgrofile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/charmmparameterset.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/simulation.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/gromacstopfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/forcefield.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal copying openmm/app/internal/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal copying openmm/app/internal/singleton.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal copying openmm/app/internal/amber_file_parser.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal copying openmm/app/internal/pdbstructure.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal copying openmm/app/internal/unitcell.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal copying openmm/app/internal/customgbforces.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal copying openmm/app/internal/argtracker.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/charmm copying openmm/app/internal/charmm/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/charmm copying openmm/app/internal/charmm/_charmmfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/charmm copying openmm/app/internal/charmm/topologyobjects.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/charmm copying openmm/app/internal/charmm/exceptions.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/charmm creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx copying openmm/app/internal/pdbx/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader copying openmm/app/internal/pdbx/reader/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader copying openmm/app/internal/pdbx/reader/PdbxContainers.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader copying openmm/app/internal/pdbx/reader/PdbxReader.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader copying openmm/app/internal/pdbx/reader/PdbxParser.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader copying openmm/app/internal/pdbx/reader/PdbxReaderTests.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader copying openmm/app/internal/pdbx/reader/PdbxReadWriteTests.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/writer copying openmm/app/internal/pdbx/writer/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/writer copying openmm/app/internal/pdbx/writer/PdbxWriterTests.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/writer copying openmm/app/internal/pdbx/writer/PdbxWriter.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/writer creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amber96_obc.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/absinth.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amber96.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/tip4pfb.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amber03_obc.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amber99sbnmr.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/opc.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/charmm36.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amoeba2013.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/glycam-hydrogens.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/tip5p.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amber99Test.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amoeba2009.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amber99_obc.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amberfb15.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/tip4pew.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/spce.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/pdbNames.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/iamoeba.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/swm4ndp.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amber99sb.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amber14-all.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amber10.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/tip3pfb.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/residues.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/tip3p.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/charmm_polar_2013.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amber99sbildn.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/opc3.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/hydrogens.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amber10_obc.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/charmm_polar_2019.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amoeba2018.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amoeba2018_gk.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amoeba2009_gk.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amoeba2013_gk.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amber03.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/DMPC.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/swm4ndp.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/tip5p.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/DPPC.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/POPE.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/POPC.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/tip3p.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/spce.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/DLPE.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/tip4pew.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/DOPC.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/test.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/DLPC.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/lipid17.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/tip4pfb.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/protein.ff15ipq.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/opc.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/DNA.bsc1.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/DNA.OL15.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/tip4pew.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/spce.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/RNA.OL3.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/tip3pfb.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/tip3p.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/opc3.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/protein.ff14SB.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/GLYCAM_06j-1.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/tip3p-pme-b.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/tip3p-pme-f.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/water.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/tip5p.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/tip4pew.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/spce.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/tip5pew.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/tip4p2005.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36 creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/implicit copying openmm/app/data/implicit/obc2.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/implicit copying openmm/app/data/implicit/gbn2.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/implicit copying openmm/app/data/implicit/gbn.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/implicit copying openmm/app/data/implicit/obc1.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/implicit copying openmm/app/data/implicit/hct.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/implicit running build_ext building 'openmm._openmm' extension creating build creating build/temp.linux-x86_64-cpython-312 creating build/temp.linux-x86_64-cpython-312/src creating build/temp.linux-x86_64-cpython-312/src/swig_doxygen x86_64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -fPIC -DMAJOR_VERSION=8 -DMINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c src/swig_doxygen/OpenMMSwig.cxx -o build/temp.linux-x86_64-cpython-312/src/swig_doxygen/OpenMMSwig.o -std=c++11 cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5, from src/swig_doxygen/OpenMMSwig.cxx:7360: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ In file included from /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/OpenMM.h:53, from src/swig_doxygen/OpenMMSwig.cxx:7346: /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/GayBerneForce.h: In constructor 'OpenMM::GayBerneForce::ParticleInfo::ParticleInfo(double, double, int, int, double, double, double, double, double, double)': /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/GayBerneForce.h:286:19: warning: 'OpenMM::GayBerneForce::ParticleInfo::epsilon' will be initialized after [-Wreorder] 286 | double sigma, epsilon, sx, sy, sz, ex, ey, ez; | ^~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/GayBerneForce.h:285:9: warning: 'int OpenMM::GayBerneForce::ParticleInfo::xparticle' [-Wreorder] 285 | int xparticle, yparticle; | ^~~~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/GayBerneForce.h:291:5: warning: when initialized here [-Wreorder] 291 | ParticleInfo(double sigma, double epsilon, int xparticle, int yparticle, double sx, double sy, double sz, double ex, double ey, double ez) : | ^~~~~~~~~~~~ In file included from /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/OpenMM.h:65: /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/NonbondedForce.h: In constructor 'OpenMM::NonbondedForce::ParticleOffsetInfo::ParticleOffsetInfo(int, int, double, double, double)': /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/NonbondedForce.h:694:19: warning: 'OpenMM::NonbondedForce::ParticleOffsetInfo::parameter' will be initialized after [-Wreorder] 694 | int particle, parameter; | ^~~~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/NonbondedForce.h:694:9: warning: 'int OpenMM::NonbondedForce::ParticleOffsetInfo::particle' [-Wreorder] 694 | int particle, parameter; | ^~~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/NonbondedForce.h:700:5: warning: when initialized here [-Wreorder] 700 | ParticleOffsetInfo(int parameter, int particle, double chargeScale, double sigmaScale, double epsilonScale) : | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/NonbondedForce.h: In constructor 'OpenMM::NonbondedForce::ExceptionOffsetInfo::ExceptionOffsetInfo(int, int, double, double, double)': /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/NonbondedForce.h:711:20: warning: 'OpenMM::NonbondedForce::ExceptionOffsetInfo::parameter' will be initialized after [-Wreorder] 711 | int exception, parameter; | ^~~~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/NonbondedForce.h:711:9: warning: 'int OpenMM::NonbondedForce::ExceptionOffsetInfo::exception' [-Wreorder] 711 | int exception, parameter; | ^~~~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/NonbondedForce.h:717:5: warning: when initialized here [-Wreorder] 717 | ExceptionOffsetInfo(int parameter, int exception, double chargeProdScale, double sigmaScale, double epsilonScale) : | ^~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/OpenMMAmoeba.h:38, from src/swig_doxygen/OpenMMSwig.cxx:7347: /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/AmoebaVdwForce.h: In constructor 'OpenMM::AmoebaVdwForce::VdwInfo::VdwInfo(int, double, double, int, double, bool)': /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/AmoebaVdwForce.h:492:36: warning: 'OpenMM::AmoebaVdwForce::VdwInfo::epsilon' will be initialized after [-Wreorder] 492 | double reductionFactor, sigma, epsilon, cutoff; | ^~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/AmoebaVdwForce.h:491:22: warning: 'int OpenMM::AmoebaVdwForce::VdwInfo::typeIndex' [-Wreorder] 491 | int parentIndex, typeIndex; | ^~~~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/AmoebaVdwForce.h:501:5: warning: when initialized here [-Wreorder] 501 | VdwInfo(int parentIndex, double sigma, double epsilon, int typeIndex, double reductionFactor, bool isAlchemical) : | ^~~~~~~ In file included from /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/OpenMMAmoeba.h:40: /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/HippoNonbondedForce.h: In constructor 'OpenMM::HippoNonbondedForce::ParticleInfo::ParticleInfo(double, const std::vector >&, const std::vector >&, double, double, double, double, double, double, double, double, double, int, int, int, int)': /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/HippoNonbondedForce.h:407:33: warning: 'OpenMM::HippoNonbondedForce::ParticleInfo::quadrupole' will be initialized after [-Wreorder] 407 | std::vector dipole, quadrupole; | ^~~~~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/HippoNonbondedForce.h:406:20: warning: 'double OpenMM::HippoNonbondedForce::ParticleInfo::coreCharge' [-Wreorder] 406 | double charge, coreCharge, alpha, epsilon, damping, c6, pauliK, pauliQ, pauliAlpha, polarizability; | ^~~~~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/HippoNonbondedForce.h:414:5: warning: when initialized here [-Wreorder] 414 | ParticleInfo(double charge, const std::vector& dipole, const std::vector& quadrupole, double coreCharge, | ^~~~~~~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/HippoNonbondedForce.h:406:89: warning: 'OpenMM::HippoNonbondedForce::ParticleInfo::polarizability' will be initialized after [-Wreorder] 406 | double charge, coreCharge, alpha, epsilon, damping, c6, pauliK, pauliQ, pauliAlpha, polarizability; | ^~~~~~~~~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/HippoNonbondedForce.h:405:9: warning: 'int OpenMM::HippoNonbondedForce::ParticleInfo::axisType' [-Wreorder] 405 | int axisType, multipoleAtomZ, multipoleAtomX, multipoleAtomY; | ^~~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/HippoNonbondedForce.h:414:5: warning: when initialized here [-Wreorder] 414 | ParticleInfo(double charge, const std::vector& dipole, const std::vector& quadrupole, double coreCharge, | ^~~~~~~~~~~~ In file included from /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/State.h:35, from /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/Integrator.h:35, from /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/BrownianIntegrator.h:35, from /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/OpenMM.h:36: /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/Vec3.h: At global scope: /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/Vec3.h:160:13: warning: 'OpenMM::Vec3 OpenMM::operator*(double, Vec3)' defined but not used [-Wunused-function] 160 | static Vec3 operator*(double lhs, Vec3 rhs) { | ^~~~~~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomHbondForce_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:100019:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 100019 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:99944:25: note: declared here 99944 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomHbondForce_addFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:99843:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 99843 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:99772:25: note: declared here 99772 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomManyParticleForce_setParticleParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:89502:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 89502 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:89460:25: note: declared here 89460 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:89505:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 89505 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:89460:25: note: declared here 89460 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_Discrete3DFunction_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:84222:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 84222 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:84177:25: note: declared here 84177 | std::vector< double > v5 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_Continuous2DFunction_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:72346:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 72346 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:72250:25: note: declared here 72250 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:72349:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 72349 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:72250:25: note: declared here 72250 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_AmoebaMultipoleForce_setExtrapolationCoefficients(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:69050:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 69050 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:69020:25: note: declared here 69020 | std::vector< double > v2 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_AmoebaMultipoleForce_setMultipoleParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:68685:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 68685 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:68559:25: note: declared here 68559 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:68686:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 68686 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:68561:25: note: declared here 68561 | std::vector< double > v5 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:68689:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 68689 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:68559:25: note: declared here 68559 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_AmoebaMultipoleForce_addMultipole(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:68389:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 68389 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:68267:25: note: declared here 68267 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:68390:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 68390 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:68269:25: note: declared here 68269 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:68393:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 68393 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:68267:25: note: declared here 68267 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:68393:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 68393 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:68267:25: note: declared here 68267 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:68393:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 68393 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:68267:25: note: declared here 68267 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:68393:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 68393 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:68267:25: note: declared here 68267 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_HippoNonbondedForce_setParticleParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:59937:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 59937 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:59727:25: note: declared here 59727 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:59938:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 59938 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:59729:25: note: declared here 59729 | std::vector< double > v5 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:59941:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 59941 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:59727:25: note: declared here 59727 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_HippoNonbondedForce_addParticle(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:59491:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 59491 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:59285:25: note: declared here 59285 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:59492:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 59492 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:59287:25: note: declared here 59287 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:59495:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 59495 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:59285:25: note: declared here 59285 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_HippoNonbondedForce_setExtrapolationCoefficients(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:58805:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 58805 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:58775:25: note: declared here 58775 | std::vector< double > v2 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_Continuous3DFunction_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:56849:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 56849 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:56720:25: note: declared here 56720 | std::vector< double > v5 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:56852:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 56852 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:56720:25: note: declared here 56720 | std::vector< double > v5 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_Discrete2DFunction_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:53338:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 53338 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:53298:25: note: declared here 53298 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomGBForce_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:53014:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 53014 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:52939:25: note: declared here 52939 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomGBForce_addFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:52838:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 52838 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:52767:25: note: declared here 52767 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomGBForce_setParticleParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:51830:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 51830 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:51795:25: note: declared here 51795 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_Continuous1DFunction_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:50379:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 50379 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:50321:25: note: declared here 50321 | std::vector< double > v2 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:50382:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 50382 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:50321:25: note: declared here 50321 | std::vector< double > v2 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomCompoundBondForce_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:49250:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 49250 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:49175:25: note: declared here 49175 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomCompoundBondForce_addFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:49074:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 49074 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:49003:25: note: declared here 49003 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomNonbondedForce_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:41531:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 41531 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:41456:25: note: declared here 41456 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomNonbondedForce_addFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:41355:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 41355 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:41284:25: note: declared here 41284 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomNonbondedForce_setParticleParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:40685:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 40685 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:40650:25: note: declared here 40650 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CMAPTorsionForce_setMapParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:38536:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 38536 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:38496:25: note: declared here 38496 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CMAPTorsionForce_addMap(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:38417:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 38417 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:38381:25: note: declared here 38381 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_Discrete1DFunction_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:38079:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 38079 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:38049:25: note: declared here 38049 | std::vector< double > v2 ; | ^~ In function 'PyObject* _wrap_CustomTorsionForce_setTorsionParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomTorsionForce_setTorsionParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:104202:79: src/swig_doxygen/OpenMMSwig.cxx:104039:35: warning: 'void operator delete(void*)' called on unallocated object 'v7' [-Wfree-nonheap-object] 104039 | if (SWIG_IsNewObj(res7)) delete arg7; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomTorsionForce_setTorsionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:103985:25: note: declared here 103985 | std::vector< double > v7 ; | ^~ In function 'PyObject* _wrap_CustomTorsionForce_addTorsion__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomTorsionForce_addTorsion(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:103857:67: src/swig_doxygen/OpenMMSwig.cxx:103712:35: warning: 'void operator delete(void*)' called on unallocated object 'v6' [-Wfree-nonheap-object] 103712 | if (SWIG_IsNewObj(res6)) delete arg6; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomTorsionForce_addTorsion(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:103662:25: note: declared here 103662 | std::vector< double > v6 ; | ^~ In function 'PyObject* _wrap_CustomHbondForce_setAcceptorParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomHbondForce_setAcceptorParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:99217:76: src/swig_doxygen/OpenMMSwig.cxx:99073:35: warning: 'void operator delete(void*)' called on unallocated object 'v6' [-Wfree-nonheap-object] 99073 | if (SWIG_IsNewObj(res6)) delete arg6; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomHbondForce_setAcceptorParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:99024:25: note: declared here 99024 | std::vector< double > v6 ; | ^~ In function 'PyObject* _wrap_CustomHbondForce_addAcceptor__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomHbondForce_addAcceptor(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:98910:64: src/swig_doxygen/OpenMMSwig.cxx:98784:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 98784 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomHbondForce_addAcceptor(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:98739:25: note: declared here 98739 | std::vector< double > v5 ; | ^~ In function 'PyObject* _wrap_CustomHbondForce_setDonorParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomHbondForce_setDonorParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:98706:73: src/swig_doxygen/OpenMMSwig.cxx:98562:35: warning: 'void operator delete(void*)' called on unallocated object 'v6' [-Wfree-nonheap-object] 98562 | if (SWIG_IsNewObj(res6)) delete arg6; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomHbondForce_setDonorParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:98513:25: note: declared here 98513 | std::vector< double > v6 ; | ^~ In function 'PyObject* _wrap_CustomHbondForce_addDonor__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomHbondForce_addDonor(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:98399:61: src/swig_doxygen/OpenMMSwig.cxx:98273:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 98273 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomHbondForce_addDonor(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:98228:25: note: declared here 98228 | std::vector< double > v5 ; | ^~ In function 'PyObject* _wrap_CustomManyParticleForce_addParticle__SWIG_1(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomManyParticleForce_addParticle(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:89353:65: src/swig_doxygen/OpenMMSwig.cxx:89284:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 89284 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomManyParticleForce_addParticle(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:89254:25: note: declared here 89254 | std::vector< double > v2 ; | ^~ In function 'PyObject* _wrap_CustomManyParticleForce_addParticle__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomManyParticleForce_addParticle(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:89375:67: src/swig_doxygen/OpenMMSwig.cxx:89240:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 89240 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomManyParticleForce_addParticle(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:89203:25: note: declared here 89203 | std::vector< double > v2 ; | ^~ In function 'PyObject* _wrap_CustomManyParticleForce_addParticle__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomManyParticleForce_addParticle(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:89375:67: src/swig_doxygen/OpenMMSwig.cxx:89243:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 89243 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomManyParticleForce_addParticle(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:89203:25: note: declared here 89203 | std::vector< double > v2 ; | ^~ In function 'PyObject* _wrap_new_Discrete3DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Discrete3DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:84385:56: src/swig_doxygen/OpenMMSwig.cxx:84082:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 84082 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Discrete3DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:84042:25: note: declared here 84042 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_new_Continuous2DFunction__SWIG_1(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous2DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:72536:64: src/swig_doxygen/OpenMMSwig.cxx:72124:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 72124 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous2DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:72033:25: note: declared here 72033 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_new_Continuous2DFunction__SWIG_1(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous2DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:72536:64: src/swig_doxygen/OpenMMSwig.cxx:72127:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 72127 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous2DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:72033:25: note: declared here 72033 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_new_Continuous2DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous2DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:72601:66: src/swig_doxygen/OpenMMSwig.cxx:72012:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 72012 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous2DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:71914:25: note: declared here 71914 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_new_Continuous2DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous2DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:72601:66: src/swig_doxygen/OpenMMSwig.cxx:72015:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 72015 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous2DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:71914:25: note: declared here 71914 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_new_Continuous3DFunction__SWIG_1(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous3DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:57060:70: src/swig_doxygen/OpenMMSwig.cxx:56559:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 56559 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous3DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:56435:25: note: declared here 56435 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_new_Continuous3DFunction__SWIG_1(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous3DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:57060:70: src/swig_doxygen/OpenMMSwig.cxx:56562:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 56562 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous3DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:56435:25: note: declared here 56435 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_new_Continuous3DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous3DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:57149:72: src/swig_doxygen/OpenMMSwig.cxx:56409:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 56409 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous3DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:56278:25: note: declared here 56278 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_new_Continuous3DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous3DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:57149:72: src/swig_doxygen/OpenMMSwig.cxx:56412:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 56412 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous3DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:56278:25: note: declared here 56278 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_CustomExternalForce_setParticleParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomExternalForce_setParticleParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:54524:75: src/swig_doxygen/OpenMMSwig.cxx:54418:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 54418 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomExternalForce_setParticleParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:54379:25: note: declared here 54379 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_CustomExternalForce_addParticle__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomExternalForce_addParticle(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:54293:63: src/swig_doxygen/OpenMMSwig.cxx:54205:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 54205 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomExternalForce_addParticle(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:54170:25: note: declared here 54170 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_new_Discrete2DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Discrete2DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:53496:54: src/swig_doxygen/OpenMMSwig.cxx:53216:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 53216 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Discrete2DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:53181:25: note: declared here 53181 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_CustomGBForce_addParticle__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomGBForce_addParticle(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:51723:55: src/swig_doxygen/OpenMMSwig.cxx:51654:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 51654 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomGBForce_addParticle(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:51624:25: note: declared here 51624 | std::vector< double > v2 ; | ^~ In function 'PyObject* _wrap_new_Continuous1DFunction__SWIG_1(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous1DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:50543:56: src/swig_doxygen/OpenMMSwig.cxx:50243:35: warning: 'void operator delete(void*)' called on unallocated object 'v1' [-Wfree-nonheap-object] 50243 | if (SWIG_IsNewObj(res1)) delete arg1; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous1DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:50190:25: note: declared here 50190 | std::vector< double > v1 ; | ^~ In function 'PyObject* _wrap_new_Continuous1DFunction__SWIG_1(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous1DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:50543:56: src/swig_doxygen/OpenMMSwig.cxx:50246:35: warning: 'void operator delete(void*)' called on unallocated object 'v1' [-Wfree-nonheap-object] 50246 | if (SWIG_IsNewObj(res1)) delete arg1; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous1DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:50190:25: note: declared here 50190 | std::vector< double > v1 ; | ^~ In function 'PyObject* _wrap_new_Continuous1DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous1DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:50578:58: src/swig_doxygen/OpenMMSwig.cxx:50177:35: warning: 'void operator delete(void*)' called on unallocated object 'v1' [-Wfree-nonheap-object] 50177 | if (SWIG_IsNewObj(res1)) delete arg1; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous1DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:50117:25: note: declared here 50117 | std::vector< double > v1 ; | ^~ In function 'PyObject* _wrap_new_Continuous1DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous1DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:50578:58: src/swig_doxygen/OpenMMSwig.cxx:50180:35: warning: 'void operator delete(void*)' called on unallocated object 'v1' [-Wfree-nonheap-object] 50180 | if (SWIG_IsNewObj(res1)) delete arg1; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous1DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:50117:25: note: declared here 50117 | std::vector< double > v1 ; | ^~ In function 'PyObject* _wrap_CustomNonbondedForce_addParticle__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomNonbondedForce_addParticle(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:40578:62: src/swig_doxygen/OpenMMSwig.cxx:40509:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 40509 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomNonbondedForce_addParticle(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:40479:25: note: declared here 40479 | std::vector< double > v2 ; | ^~ In function 'PyObject* _wrap_CustomAngleForce_setAngleParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomAngleForce_setAngleParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:36810:73: src/swig_doxygen/OpenMMSwig.cxx:36666:35: warning: 'void operator delete(void*)' called on unallocated object 'v6' [-Wfree-nonheap-object] 36666 | if (SWIG_IsNewObj(res6)) delete arg6; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomAngleForce_setAngleParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:36617:25: note: declared here 36617 | std::vector< double > v6 ; | ^~ In function 'PyObject* _wrap_CustomAngleForce_addAngle__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomAngleForce_addAngle(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:36503:61: src/swig_doxygen/OpenMMSwig.cxx:36377:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 36377 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomAngleForce_addAngle(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:36332:25: note: declared here 36332 | std::vector< double > v5 ; | ^~ In function 'PyObject* _wrap_CustomBondForce_setBondParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomBondForce_setBondParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:34017:69: src/swig_doxygen/OpenMMSwig.cxx:33892:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 33892 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomBondForce_setBondParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:33848:25: note: declared here 33848 | std::vector< double > v5 ; | ^~ In function 'PyObject* _wrap_CustomBondForce_addBond__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomBondForce_addBond(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:33748:57: src/swig_doxygen/OpenMMSwig.cxx:33641:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 33641 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomBondForce_addBond(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:33601:25: note: declared here 33601 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_new_Discrete1DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Discrete1DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:38227:50: src/swig_doxygen/OpenMMSwig.cxx:37993:35: warning: 'void operator delete(void*)' called on unallocated object 'v1' [-Wfree-nonheap-object] 37993 | if (SWIG_IsNewObj(res1)) delete arg1; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Discrete1DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:37968:25: note: declared here 37968 | std::vector< double > v1 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_MinimizationReporter_report(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:84985:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 84985 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:84918:25: note: declared here 84918 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:84986:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 84986 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:84920:25: note: declared here 84920 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:84989:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 84989 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:84918:25: note: declared here 84918 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:84989:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 84989 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:84918:25: note: declared here 84918 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_CustomCentroidBondForce_setBondParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomCentroidBondForce_setBondParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:71320:75: src/swig_doxygen/OpenMMSwig.cxx:71210:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 71210 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomCentroidBondForce_setBondParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:71164:25: note: declared here 71164 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_CustomCentroidBondForce_addBond__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomCentroidBondForce_addBond(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:71079:63: src/swig_doxygen/OpenMMSwig.cxx:70987:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 70987 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomCentroidBondForce_addBond(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:70945:25: note: declared here 70945 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_CustomCentroidBondForce_setGroupParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomCentroidBondForce_setGroupParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:70921:76: src/swig_doxygen/OpenMMSwig.cxx:70811:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 70811 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomCentroidBondForce_setGroupParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:70765:25: note: declared here 70765 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_CustomCentroidBondForce_addGroup__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomCentroidBondForce_addGroup(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:70680:64: src/swig_doxygen/OpenMMSwig.cxx:70588:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 70588 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomCentroidBondForce_addGroup(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:70546:25: note: declared here 70546 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_CustomCompoundBondForce_setBondParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomCompoundBondForce_setBondParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:48612:75: src/swig_doxygen/OpenMMSwig.cxx:48502:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 48502 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomCompoundBondForce_setBondParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:48456:25: note: declared here 48456 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_CustomCompoundBondForce_addBond__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomCompoundBondForce_addBond(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:48371:63: src/swig_doxygen/OpenMMSwig.cxx:48279:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 48279 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomCompoundBondForce_addBond(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:48237:25: note: declared here 48237 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_new_LocalCoordinatesSite__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_LocalCoordinatesSite(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:45543:60: src/swig_doxygen/OpenMMSwig.cxx:45192:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 45192 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_LocalCoordinatesSite(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:45124:25: note: declared here 45124 | std::vector< double > v2 ; | ^~ In function 'PyObject* _wrap_new_LocalCoordinatesSite__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_LocalCoordinatesSite(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:45543:60: src/swig_doxygen/OpenMMSwig.cxx:45193:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 45193 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_LocalCoordinatesSite(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:45126:25: note: declared here 45126 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_new_LocalCoordinatesSite__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_LocalCoordinatesSite(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:45543:60: src/swig_doxygen/OpenMMSwig.cxx:45194:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 45194 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_LocalCoordinatesSite(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:45128:25: note: declared here 45128 | std::vector< double > v4 ; | ^~ x86_64-linux-gnu-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,--as-needed -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" build/temp.linux-x86_64-cpython-312/src/swig_doxygen/OpenMMSwig.o -L/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,--enable-new-dtags,-R/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu -lOpenMM -lOpenMMAmoeba -lOpenMMRPMD -lOpenMMDrude -o /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/_openmm.cpython-312-x86_64-linux-gnu.so building 'openmm.app.internal.compiled' extension creating build/temp.linux-x86_64-cpython-312/openmm creating build/temp.linux-x86_64-cpython-312/openmm/app creating build/temp.linux-x86_64-cpython-312/openmm/app/internal x86_64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -fPIC -I/usr/include/python3.12 -c openmm/app/internal/compiled.cpp -o build/temp.linux-x86_64-cpython-312/openmm/app/internal/compiled.o cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ x86_64-linux-gnu-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,--as-needed -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" build/temp.linux-x86_64-cpython-312/openmm/app/internal/compiled.o -L/usr/lib/x86_64-linux-gnu -o /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/compiled.cpython-312-x86_64-linux-gnu.so building 'openmm.app.internal.xtc_utils' extension creating build/temp.linux-x86_64-cpython-312/openmm/app/internal/xtc_utils creating build/temp.linux-x86_64-cpython-312/openmm/app/internal/xtc_utils/src x86_64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -fPIC -Iopenmm/app/internal/xtc_utils -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include -I/usr/lib/python3/dist-packages/numpy/core/include -Iopenmm/app/internal/xtc_utils/include -Iopenmm/app/internal/xtc_utils/ -I/usr/include/python3.12 -c openmm/app/internal/xtc_utils/src/xdrfile.cpp -o build/temp.linux-x86_64-cpython-312/openmm/app/internal/xtc_utils/src/xdrfile.o cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ openmm/app/internal/xtc_utils/src/xdrfile.cpp: In function 'int sizeofint(int)': openmm/app/internal/xtc_utils/src/xdrfile.cpp:454:17: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 454 | while (size >= num && num_of_bits < 32) | ~~~~~^~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp: In function 'int sizeofints(int, unsigned int*)': openmm/app/internal/xtc_utils/src/xdrfile.cpp:500:32: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 500 | while (bytes[num_of_bytes] >= num) | ~~~~~~~~~~~~~~~~~~~~^~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp: In function 'void encodeints(int*, int, int, unsigned int*, unsigned int*)': openmm/app/internal/xtc_utils/src/xdrfile.cpp:609:21: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 609 | if (num_of_bits >= num_of_bytes * 8) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:611:31: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 611 | for (i = 0; i < num_of_bytes; i++) | ~~^~~~~~~~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:619:31: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 619 | for (i = 0; i < num_of_bytes-1; i++) | ~~^~~~~~~~~~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp: In function 'int decodebits(int*, int)': openmm/app/internal/xtc_utils/src/xdrfile.cpp:659:30: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 659 | if (lastbits < num_of_bits) | ~~~~~~~~~^~~~~~~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp: In function 'int xdrfile_decompress_coord_float(float*, int*, float*, XDRFILE*)': openmm/app/internal/xtc_utils/src/xdrfile.cpp:780:17: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 780 | if(size3>xfp->buf1size) | ~~~~~^~~~~~~~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:837:26: warning: comparison of integer expressions of different signedness: 'long unsigned int' and 'int' [-Wsign-compare] 837 | maxidx = (LASTIDX= size3 ) { return -1; } | ~~~~~~~~~^~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:930:45: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 930 | if(countmjh >= size3 ) { return -1; } | ~~~~~~~~~^~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:933:45: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 933 | if(countmjh >= size3 ) { return -1; } | ~~~~~~~~~^~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:940:45: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 940 | if(countmjh >= size3 ) { return -1; } | ~~~~~~~~~^~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:943:45: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 943 | if(countmjh >= size3 ) { return -1; } | ~~~~~~~~~^~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:946:45: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 946 | if(countmjh >= size3 ) { return -1; } | ~~~~~~~~~^~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:751:24: warning: variable 'minidx' set but not used [-Wunused-but-set-variable] 751 | int smallidx, minidx, maxidx; | ^~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:754:32: warning: variable 'larger' set but not used [-Wunused-but-set-variable] 754 | int smallnum, smaller, larger, i, is_smaller, run; | ^~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:758:13: warning: unused variable 'errval' [-Wunused-variable] 758 | int errval=1; | ^~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp: In function 'int xdrfile_compress_coord_float(float*, int, float, XDRFILE*)': openmm/app/internal/xtc_utils/src/xdrfile.cpp:1006:17: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 1006 | if(size3>xfp->buf1size) | ~~~~~^~~~~~~~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:1063:41: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 1063 | countmjh++; if( countmjh> size3) { return -1; } | ~~~~~~~~^~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:1079:35: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 1079 | countmjh++; if( countmjh> size3) { return -1; } | ~~~~~~~~^~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:1093:35: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 1093 | countmjh++; if( countmjh> size3) { return -1; } | ~~~~~~~~^~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:1132:25: warning: comparison of integer expressions of different signedness: 'int' and 'long unsigned int' [-Wsign-compare] 1132 | while (smallidx < LASTIDX && magicints[smallidx] < mindiff) | ^ openmm/app/internal/xtc_utils/src/xdrfile.cpp:1138:26: warning: comparison of integer expressions of different signedness: 'long unsigned int' and 'int' [-Wsign-compare] 1138 | maxidx = (LASTIDXxfp->buf1size) | ~~~~~^~~~~~~~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:1372:26: warning: comparison of integer expressions of different signedness: 'long unsigned int' and 'int' [-Wsign-compare] 1372 | maxidx = (LASTIDXxfp->buf1size) { | ~~~~~^~~~~~~~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:1623:25: warning: comparison of integer expressions of different signedness: 'int' and 'long unsigned int' [-Wsign-compare] 1623 | while (smallidx < LASTIDX && magicints[smallidx] < mindiff) { | ^ openmm/app/internal/xtc_utils/src/xdrfile.cpp:1628:26: warning: comparison of integer expressions of different signedness: 'long unsigned int' and 'int' [-Wsign-compare] 1628 | maxidx = (LASTIDX, , ] license Python Software Foundation License (BSD-like) long_descriptionOpenMM is a toolkit for molecular simulation. It can be used either as a stand-alone application for running simulations, or as a library you call from your own code. It provides a combination of extreme flexibility (through custom forces and integrators), openness, and high performance (especially on recent GPUs) that make it truly unique among simulation codes. name OpenMM package_data{'openmm': [], 'openmm.app': ['data/*.xml', 'data/*.pdb', 'data/amber14/*.xml', 'data/charmm36/*.xml', 'data/implicit/*.xml'], 'openmm.app.internal': []} packages['simtk', 'simtk.unit', 'simtk.openmm', 'simtk.openmm.app', 'openmm', 'openmm.unit', 'openmm', 'openmm.app', 'openmm.app.internal', 'openmm.app.internal.charmm', 'openmm.app.internal.pdbx', 'openmm.app.internal.pdbx.reader', 'openmm.app.internal.pdbx.writer'] platforms ['Linux', 'Mac OS X', 'Windows'] url https://openmm.org version 8.1.1 running build running build_py creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/simtk copying simtk/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/simtk creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/simtk/unit copying simtk/unit/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/simtk/unit creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/simtk/openmm copying simtk/openmm/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/simtk/openmm creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/simtk/openmm/app copying simtk/openmm/app/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/simtk/openmm/app creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm copying openmm/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm copying openmm/amd.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm copying openmm/openmm.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm copying openmm/version.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm copying openmm/vec3.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm copying openmm/mtsintegrator.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm copying openmm/testInstallation.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit copying openmm/unit/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit copying openmm/unit/unit.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit copying openmm/unit/constants.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit copying openmm/unit/doctests.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit copying openmm/unit/unit_operators.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit copying openmm/unit/quantity.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit copying openmm/unit/standard_dimensions.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit copying openmm/unit/basedimension.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit copying openmm/unit/mymatrix.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit copying openmm/unit/unit_definitions.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit copying openmm/unit/unit_math.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit copying openmm/unit/prefix.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit copying openmm/unit/baseunit.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app copying openmm/app/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app copying openmm/app/xtcfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app copying openmm/app/statedatareporter.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app copying openmm/app/xtcreporter.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app copying openmm/app/topology.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app copying openmm/app/pdbfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app copying openmm/app/amberprmtopfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app copying openmm/app/metadynamics.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app copying openmm/app/charmmpsffile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app copying openmm/app/modeller.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app copying openmm/app/pdbreporter.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app copying openmm/app/element.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app copying openmm/app/simulatedtempering.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app copying openmm/app/desmonddmsfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app copying openmm/app/amberinpcrdfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app copying openmm/app/pdbxfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app copying openmm/app/charmmcrdfiles.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app copying openmm/app/dcdreporter.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app copying openmm/app/checkpointreporter.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app copying openmm/app/dcdfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app copying openmm/app/gromacsgrofile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app copying openmm/app/charmmparameterset.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app copying openmm/app/simulation.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app copying openmm/app/gromacstopfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app copying openmm/app/forcefield.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal copying openmm/app/internal/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal copying openmm/app/internal/singleton.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal copying openmm/app/internal/amber_file_parser.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal copying openmm/app/internal/pdbstructure.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal copying openmm/app/internal/unitcell.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal copying openmm/app/internal/customgbforces.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal copying openmm/app/internal/argtracker.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/charmm copying openmm/app/internal/charmm/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/charmm copying openmm/app/internal/charmm/_charmmfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/charmm copying openmm/app/internal/charmm/topologyobjects.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/charmm copying openmm/app/internal/charmm/exceptions.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/charmm creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx copying openmm/app/internal/pdbx/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx/reader copying openmm/app/internal/pdbx/reader/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx/reader copying openmm/app/internal/pdbx/reader/PdbxContainers.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx/reader copying openmm/app/internal/pdbx/reader/PdbxReader.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx/reader copying openmm/app/internal/pdbx/reader/PdbxParser.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx/reader copying openmm/app/internal/pdbx/reader/PdbxReaderTests.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx/reader copying openmm/app/internal/pdbx/reader/PdbxReadWriteTests.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx/reader creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx/writer copying openmm/app/internal/pdbx/writer/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx/writer copying openmm/app/internal/pdbx/writer/PdbxWriterTests.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx/writer copying openmm/app/internal/pdbx/writer/PdbxWriter.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx/writer creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/amber96_obc.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/absinth.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/amber96.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/tip4pfb.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/amber03_obc.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/amber99sbnmr.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/opc.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/charmm36.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/amoeba2013.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/glycam-hydrogens.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/tip5p.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/amber99Test.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/amoeba2009.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/amber99_obc.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/amberfb15.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/tip4pew.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/spce.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/pdbNames.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/iamoeba.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/swm4ndp.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/amber99sb.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/amber14-all.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/amber10.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/tip3pfb.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/residues.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/tip3p.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/charmm_polar_2013.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/amber99sbildn.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/opc3.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/hydrogens.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/amber10_obc.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/charmm_polar_2019.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/amoeba2018.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/amoeba2018_gk.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/amoeba2009_gk.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/amoeba2013_gk.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/amber03.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/DMPC.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/swm4ndp.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/tip5p.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/DPPC.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/POPE.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/POPC.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/tip3p.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/spce.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/DLPE.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/tip4pew.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/DOPC.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/test.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/DLPC.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14 copying openmm/app/data/amber14/lipid17.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14 copying openmm/app/data/amber14/tip4pfb.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14 copying openmm/app/data/amber14/protein.ff15ipq.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14 copying openmm/app/data/amber14/opc.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14 copying openmm/app/data/amber14/DNA.bsc1.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14 copying openmm/app/data/amber14/DNA.OL15.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14 copying openmm/app/data/amber14/tip4pew.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14 copying openmm/app/data/amber14/spce.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14 copying openmm/app/data/amber14/RNA.OL3.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14 copying openmm/app/data/amber14/tip3pfb.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14 copying openmm/app/data/amber14/tip3p.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14 copying openmm/app/data/amber14/opc3.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14 copying openmm/app/data/amber14/protein.ff14SB.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14 copying openmm/app/data/amber14/GLYCAM_06j-1.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14 creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/tip3p-pme-b.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/tip3p-pme-f.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/water.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/tip5p.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/tip4pew.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/spce.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/tip5pew.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/tip4p2005.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/charmm36 creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/implicit copying openmm/app/data/implicit/obc2.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/implicit copying openmm/app/data/implicit/gbn2.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/implicit copying openmm/app/data/implicit/gbn.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/implicit copying openmm/app/data/implicit/obc1.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/implicit copying openmm/app/data/implicit/hct.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/implicit running build_ext building 'openmm._openmm' extension creating build/temp.linux-x86_64-cpython-311 creating build/temp.linux-x86_64-cpython-311/src creating build/temp.linux-x86_64-cpython-311/src/swig_doxygen x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -fPIC -DMAJOR_VERSION=8 -DMINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c src/swig_doxygen/OpenMMSwig.cxx -o build/temp.linux-x86_64-cpython-311/src/swig_doxygen/OpenMMSwig.o -std=c++11 cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5, from src/swig_doxygen/OpenMMSwig.cxx:7360: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ In file included from /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/OpenMM.h:53, from src/swig_doxygen/OpenMMSwig.cxx:7346: /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/GayBerneForce.h: In constructor 'OpenMM::GayBerneForce::ParticleInfo::ParticleInfo(double, double, int, int, double, double, double, double, double, double)': /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/GayBerneForce.h:286:19: warning: 'OpenMM::GayBerneForce::ParticleInfo::epsilon' will be initialized after [-Wreorder] 286 | double sigma, epsilon, sx, sy, sz, ex, ey, ez; | ^~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/GayBerneForce.h:285:9: warning: 'int OpenMM::GayBerneForce::ParticleInfo::xparticle' [-Wreorder] 285 | int xparticle, yparticle; | ^~~~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/GayBerneForce.h:291:5: warning: when initialized here [-Wreorder] 291 | ParticleInfo(double sigma, double epsilon, int xparticle, int yparticle, double sx, double sy, double sz, double ex, double ey, double ez) : | ^~~~~~~~~~~~ In file included from /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/OpenMM.h:65: /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/NonbondedForce.h: In constructor 'OpenMM::NonbondedForce::ParticleOffsetInfo::ParticleOffsetInfo(int, int, double, double, double)': /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/NonbondedForce.h:694:19: warning: 'OpenMM::NonbondedForce::ParticleOffsetInfo::parameter' will be initialized after [-Wreorder] 694 | int particle, parameter; | ^~~~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/NonbondedForce.h:694:9: warning: 'int OpenMM::NonbondedForce::ParticleOffsetInfo::particle' [-Wreorder] 694 | int particle, parameter; | ^~~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/NonbondedForce.h:700:5: warning: when initialized here [-Wreorder] 700 | ParticleOffsetInfo(int parameter, int particle, double chargeScale, double sigmaScale, double epsilonScale) : | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/NonbondedForce.h: In constructor 'OpenMM::NonbondedForce::ExceptionOffsetInfo::ExceptionOffsetInfo(int, int, double, double, double)': /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/NonbondedForce.h:711:20: warning: 'OpenMM::NonbondedForce::ExceptionOffsetInfo::parameter' will be initialized after [-Wreorder] 711 | int exception, parameter; | ^~~~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/NonbondedForce.h:711:9: warning: 'int OpenMM::NonbondedForce::ExceptionOffsetInfo::exception' [-Wreorder] 711 | int exception, parameter; | ^~~~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/NonbondedForce.h:717:5: warning: when initialized here [-Wreorder] 717 | ExceptionOffsetInfo(int parameter, int exception, double chargeProdScale, double sigmaScale, double epsilonScale) : | ^~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/OpenMMAmoeba.h:38, from src/swig_doxygen/OpenMMSwig.cxx:7347: /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/AmoebaVdwForce.h: In constructor 'OpenMM::AmoebaVdwForce::VdwInfo::VdwInfo(int, double, double, int, double, bool)': /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/AmoebaVdwForce.h:492:36: warning: 'OpenMM::AmoebaVdwForce::VdwInfo::epsilon' will be initialized after [-Wreorder] 492 | double reductionFactor, sigma, epsilon, cutoff; | ^~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/AmoebaVdwForce.h:491:22: warning: 'int OpenMM::AmoebaVdwForce::VdwInfo::typeIndex' [-Wreorder] 491 | int parentIndex, typeIndex; | ^~~~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/AmoebaVdwForce.h:501:5: warning: when initialized here [-Wreorder] 501 | VdwInfo(int parentIndex, double sigma, double epsilon, int typeIndex, double reductionFactor, bool isAlchemical) : | ^~~~~~~ In file included from /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/OpenMMAmoeba.h:40: /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/HippoNonbondedForce.h: In constructor 'OpenMM::HippoNonbondedForce::ParticleInfo::ParticleInfo(double, const std::vector >&, const std::vector >&, double, double, double, double, double, double, double, double, double, int, int, int, int)': /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/HippoNonbondedForce.h:407:33: warning: 'OpenMM::HippoNonbondedForce::ParticleInfo::quadrupole' will be initialized after [-Wreorder] 407 | std::vector dipole, quadrupole; | ^~~~~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/HippoNonbondedForce.h:406:20: warning: 'double OpenMM::HippoNonbondedForce::ParticleInfo::coreCharge' [-Wreorder] 406 | double charge, coreCharge, alpha, epsilon, damping, c6, pauliK, pauliQ, pauliAlpha, polarizability; | ^~~~~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/HippoNonbondedForce.h:414:5: warning: when initialized here [-Wreorder] 414 | ParticleInfo(double charge, const std::vector& dipole, const std::vector& quadrupole, double coreCharge, | ^~~~~~~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/HippoNonbondedForce.h:406:89: warning: 'OpenMM::HippoNonbondedForce::ParticleInfo::polarizability' will be initialized after [-Wreorder] 406 | double charge, coreCharge, alpha, epsilon, damping, c6, pauliK, pauliQ, pauliAlpha, polarizability; | ^~~~~~~~~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/HippoNonbondedForce.h:405:9: warning: 'int OpenMM::HippoNonbondedForce::ParticleInfo::axisType' [-Wreorder] 405 | int axisType, multipoleAtomZ, multipoleAtomX, multipoleAtomY; | ^~~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/HippoNonbondedForce.h:414:5: warning: when initialized here [-Wreorder] 414 | ParticleInfo(double charge, const std::vector& dipole, const std::vector& quadrupole, double coreCharge, | ^~~~~~~~~~~~ In file included from /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/State.h:35, from /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/Integrator.h:35, from /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/BrownianIntegrator.h:35, from /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/OpenMM.h:36: /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/Vec3.h: At global scope: /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/Vec3.h:160:13: warning: 'OpenMM::Vec3 OpenMM::operator*(double, Vec3)' defined but not used [-Wunused-function] 160 | static Vec3 operator*(double lhs, Vec3 rhs) { | ^~~~~~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomHbondForce_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:100019:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 100019 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:99944:25: note: declared here 99944 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomHbondForce_addFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:99843:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 99843 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:99772:25: note: declared here 99772 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomManyParticleForce_setParticleParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:89502:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 89502 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:89460:25: note: declared here 89460 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:89505:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 89505 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:89460:25: note: declared here 89460 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_Discrete3DFunction_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:84222:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 84222 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:84177:25: note: declared here 84177 | std::vector< double > v5 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_Continuous2DFunction_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:72346:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 72346 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:72250:25: note: declared here 72250 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:72349:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 72349 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:72250:25: note: declared here 72250 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_AmoebaMultipoleForce_setExtrapolationCoefficients(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:69050:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 69050 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:69020:25: note: declared here 69020 | std::vector< double > v2 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_AmoebaMultipoleForce_setMultipoleParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:68685:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 68685 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:68559:25: note: declared here 68559 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:68686:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 68686 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:68561:25: note: declared here 68561 | std::vector< double > v5 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:68689:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 68689 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:68559:25: note: declared here 68559 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_AmoebaMultipoleForce_addMultipole(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:68389:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 68389 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:68267:25: note: declared here 68267 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:68390:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 68390 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:68269:25: note: declared here 68269 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:68393:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 68393 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:68267:25: note: declared here 68267 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:68393:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 68393 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:68267:25: note: declared here 68267 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:68393:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 68393 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:68267:25: note: declared here 68267 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:68393:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 68393 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:68267:25: note: declared here 68267 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_HippoNonbondedForce_setParticleParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:59937:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 59937 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:59727:25: note: declared here 59727 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:59938:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 59938 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:59729:25: note: declared here 59729 | std::vector< double > v5 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:59941:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 59941 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:59727:25: note: declared here 59727 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_HippoNonbondedForce_addParticle(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:59491:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 59491 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:59285:25: note: declared here 59285 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:59492:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 59492 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:59287:25: note: declared here 59287 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:59495:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 59495 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:59285:25: note: declared here 59285 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_HippoNonbondedForce_setExtrapolationCoefficients(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:58805:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 58805 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:58775:25: note: declared here 58775 | std::vector< double > v2 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_Continuous3DFunction_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:56849:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 56849 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:56720:25: note: declared here 56720 | std::vector< double > v5 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:56852:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 56852 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:56720:25: note: declared here 56720 | std::vector< double > v5 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_Discrete2DFunction_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:53338:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 53338 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:53298:25: note: declared here 53298 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomGBForce_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:53014:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 53014 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:52939:25: note: declared here 52939 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomGBForce_addFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:52838:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 52838 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:52767:25: note: declared here 52767 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomGBForce_setParticleParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:51830:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 51830 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:51795:25: note: declared here 51795 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_Continuous1DFunction_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:50379:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 50379 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:50321:25: note: declared here 50321 | std::vector< double > v2 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:50382:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 50382 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:50321:25: note: declared here 50321 | std::vector< double > v2 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomCompoundBondForce_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:49250:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 49250 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:49175:25: note: declared here 49175 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomCompoundBondForce_addFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:49074:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 49074 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:49003:25: note: declared here 49003 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomNonbondedForce_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:41531:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 41531 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:41456:25: note: declared here 41456 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomNonbondedForce_addFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:41355:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 41355 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:41284:25: note: declared here 41284 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomNonbondedForce_setParticleParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:40685:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 40685 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:40650:25: note: declared here 40650 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CMAPTorsionForce_setMapParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:38536:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 38536 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:38496:25: note: declared here 38496 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CMAPTorsionForce_addMap(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:38417:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 38417 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:38381:25: note: declared here 38381 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_Discrete1DFunction_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:38079:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 38079 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:38049:25: note: declared here 38049 | std::vector< double > v2 ; | ^~ In function 'PyObject* _wrap_CustomTorsionForce_setTorsionParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomTorsionForce_setTorsionParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:104202:79: src/swig_doxygen/OpenMMSwig.cxx:104039:35: warning: 'void operator delete(void*)' called on unallocated object 'v7' [-Wfree-nonheap-object] 104039 | if (SWIG_IsNewObj(res7)) delete arg7; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomTorsionForce_setTorsionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:103985:25: note: declared here 103985 | std::vector< double > v7 ; | ^~ In function 'PyObject* _wrap_CustomTorsionForce_addTorsion__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomTorsionForce_addTorsion(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:103857:67: src/swig_doxygen/OpenMMSwig.cxx:103712:35: warning: 'void operator delete(void*)' called on unallocated object 'v6' [-Wfree-nonheap-object] 103712 | if (SWIG_IsNewObj(res6)) delete arg6; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomTorsionForce_addTorsion(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:103662:25: note: declared here 103662 | std::vector< double > v6 ; | ^~ In function 'PyObject* _wrap_CustomHbondForce_setAcceptorParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomHbondForce_setAcceptorParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:99217:76: src/swig_doxygen/OpenMMSwig.cxx:99073:35: warning: 'void operator delete(void*)' called on unallocated object 'v6' [-Wfree-nonheap-object] 99073 | if (SWIG_IsNewObj(res6)) delete arg6; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomHbondForce_setAcceptorParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:99024:25: note: declared here 99024 | std::vector< double > v6 ; | ^~ In function 'PyObject* _wrap_CustomHbondForce_addAcceptor__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomHbondForce_addAcceptor(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:98910:64: src/swig_doxygen/OpenMMSwig.cxx:98784:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 98784 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomHbondForce_addAcceptor(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:98739:25: note: declared here 98739 | std::vector< double > v5 ; | ^~ In function 'PyObject* _wrap_CustomHbondForce_setDonorParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomHbondForce_setDonorParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:98706:73: src/swig_doxygen/OpenMMSwig.cxx:98562:35: warning: 'void operator delete(void*)' called on unallocated object 'v6' [-Wfree-nonheap-object] 98562 | if (SWIG_IsNewObj(res6)) delete arg6; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomHbondForce_setDonorParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:98513:25: note: declared here 98513 | std::vector< double > v6 ; | ^~ In function 'PyObject* _wrap_CustomHbondForce_addDonor__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomHbondForce_addDonor(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:98399:61: src/swig_doxygen/OpenMMSwig.cxx:98273:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 98273 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomHbondForce_addDonor(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:98228:25: note: declared here 98228 | std::vector< double > v5 ; | ^~ In function 'PyObject* _wrap_CustomManyParticleForce_addParticle__SWIG_1(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomManyParticleForce_addParticle(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:89353:65: src/swig_doxygen/OpenMMSwig.cxx:89284:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 89284 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomManyParticleForce_addParticle(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:89254:25: note: declared here 89254 | std::vector< double > v2 ; | ^~ In function 'PyObject* _wrap_CustomManyParticleForce_addParticle__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomManyParticleForce_addParticle(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:89375:67: src/swig_doxygen/OpenMMSwig.cxx:89240:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 89240 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomManyParticleForce_addParticle(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:89203:25: note: declared here 89203 | std::vector< double > v2 ; | ^~ In function 'PyObject* _wrap_CustomManyParticleForce_addParticle__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomManyParticleForce_addParticle(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:89375:67: src/swig_doxygen/OpenMMSwig.cxx:89243:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 89243 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomManyParticleForce_addParticle(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:89203:25: note: declared here 89203 | std::vector< double > v2 ; | ^~ In function 'PyObject* _wrap_new_Discrete3DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Discrete3DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:84385:56: src/swig_doxygen/OpenMMSwig.cxx:84082:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 84082 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Discrete3DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:84042:25: note: declared here 84042 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_new_Continuous2DFunction__SWIG_1(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous2DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:72536:64: src/swig_doxygen/OpenMMSwig.cxx:72124:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 72124 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous2DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:72033:25: note: declared here 72033 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_new_Continuous2DFunction__SWIG_1(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous2DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:72536:64: src/swig_doxygen/OpenMMSwig.cxx:72127:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 72127 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous2DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:72033:25: note: declared here 72033 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_new_Continuous2DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous2DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:72601:66: src/swig_doxygen/OpenMMSwig.cxx:72012:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 72012 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous2DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:71914:25: note: declared here 71914 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_new_Continuous2DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous2DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:72601:66: src/swig_doxygen/OpenMMSwig.cxx:72015:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 72015 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous2DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:71914:25: note: declared here 71914 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_new_Continuous3DFunction__SWIG_1(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous3DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:57060:70: src/swig_doxygen/OpenMMSwig.cxx:56559:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 56559 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous3DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:56435:25: note: declared here 56435 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_new_Continuous3DFunction__SWIG_1(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous3DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:57060:70: src/swig_doxygen/OpenMMSwig.cxx:56562:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 56562 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous3DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:56435:25: note: declared here 56435 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_new_Continuous3DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous3DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:57149:72: src/swig_doxygen/OpenMMSwig.cxx:56409:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 56409 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous3DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:56278:25: note: declared here 56278 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_new_Continuous3DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous3DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:57149:72: src/swig_doxygen/OpenMMSwig.cxx:56412:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 56412 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous3DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:56278:25: note: declared here 56278 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_CustomExternalForce_setParticleParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomExternalForce_setParticleParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:54524:75: src/swig_doxygen/OpenMMSwig.cxx:54418:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 54418 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomExternalForce_setParticleParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:54379:25: note: declared here 54379 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_CustomExternalForce_addParticle__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomExternalForce_addParticle(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:54293:63: src/swig_doxygen/OpenMMSwig.cxx:54205:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 54205 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomExternalForce_addParticle(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:54170:25: note: declared here 54170 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_new_Discrete2DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Discrete2DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:53496:54: src/swig_doxygen/OpenMMSwig.cxx:53216:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 53216 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Discrete2DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:53181:25: note: declared here 53181 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_CustomGBForce_addParticle__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomGBForce_addParticle(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:51723:55: src/swig_doxygen/OpenMMSwig.cxx:51654:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 51654 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomGBForce_addParticle(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:51624:25: note: declared here 51624 | std::vector< double > v2 ; | ^~ In function 'PyObject* _wrap_new_Continuous1DFunction__SWIG_1(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous1DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:50543:56: src/swig_doxygen/OpenMMSwig.cxx:50243:35: warning: 'void operator delete(void*)' called on unallocated object 'v1' [-Wfree-nonheap-object] 50243 | if (SWIG_IsNewObj(res1)) delete arg1; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous1DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:50190:25: note: declared here 50190 | std::vector< double > v1 ; | ^~ In function 'PyObject* _wrap_new_Continuous1DFunction__SWIG_1(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous1DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:50543:56: src/swig_doxygen/OpenMMSwig.cxx:50246:35: warning: 'void operator delete(void*)' called on unallocated object 'v1' [-Wfree-nonheap-object] 50246 | if (SWIG_IsNewObj(res1)) delete arg1; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous1DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:50190:25: note: declared here 50190 | std::vector< double > v1 ; | ^~ In function 'PyObject* _wrap_new_Continuous1DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous1DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:50578:58: src/swig_doxygen/OpenMMSwig.cxx:50177:35: warning: 'void operator delete(void*)' called on unallocated object 'v1' [-Wfree-nonheap-object] 50177 | if (SWIG_IsNewObj(res1)) delete arg1; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous1DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:50117:25: note: declared here 50117 | std::vector< double > v1 ; | ^~ In function 'PyObject* _wrap_new_Continuous1DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous1DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:50578:58: src/swig_doxygen/OpenMMSwig.cxx:50180:35: warning: 'void operator delete(void*)' called on unallocated object 'v1' [-Wfree-nonheap-object] 50180 | if (SWIG_IsNewObj(res1)) delete arg1; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous1DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:50117:25: note: declared here 50117 | std::vector< double > v1 ; | ^~ In function 'PyObject* _wrap_CustomNonbondedForce_addParticle__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomNonbondedForce_addParticle(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:40578:62: src/swig_doxygen/OpenMMSwig.cxx:40509:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 40509 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomNonbondedForce_addParticle(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:40479:25: note: declared here 40479 | std::vector< double > v2 ; | ^~ In function 'PyObject* _wrap_CustomAngleForce_setAngleParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomAngleForce_setAngleParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:36810:73: src/swig_doxygen/OpenMMSwig.cxx:36666:35: warning: 'void operator delete(void*)' called on unallocated object 'v6' [-Wfree-nonheap-object] 36666 | if (SWIG_IsNewObj(res6)) delete arg6; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomAngleForce_setAngleParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:36617:25: note: declared here 36617 | std::vector< double > v6 ; | ^~ In function 'PyObject* _wrap_CustomAngleForce_addAngle__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomAngleForce_addAngle(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:36503:61: src/swig_doxygen/OpenMMSwig.cxx:36377:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 36377 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomAngleForce_addAngle(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:36332:25: note: declared here 36332 | std::vector< double > v5 ; | ^~ In function 'PyObject* _wrap_CustomBondForce_setBondParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomBondForce_setBondParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:34017:69: src/swig_doxygen/OpenMMSwig.cxx:33892:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 33892 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomBondForce_setBondParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:33848:25: note: declared here 33848 | std::vector< double > v5 ; | ^~ In function 'PyObject* _wrap_CustomBondForce_addBond__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomBondForce_addBond(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:33748:57: src/swig_doxygen/OpenMMSwig.cxx:33641:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 33641 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomBondForce_addBond(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:33601:25: note: declared here 33601 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_new_Discrete1DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Discrete1DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:38227:50: src/swig_doxygen/OpenMMSwig.cxx:37993:35: warning: 'void operator delete(void*)' called on unallocated object 'v1' [-Wfree-nonheap-object] 37993 | if (SWIG_IsNewObj(res1)) delete arg1; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Discrete1DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:37968:25: note: declared here 37968 | std::vector< double > v1 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_MinimizationReporter_report(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:84985:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 84985 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:84918:25: note: declared here 84918 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:84986:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 84986 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:84920:25: note: declared here 84920 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:84989:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 84989 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:84918:25: note: declared here 84918 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:84989:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 84989 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:84918:25: note: declared here 84918 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_CustomCentroidBondForce_setBondParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomCentroidBondForce_setBondParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:71320:75: src/swig_doxygen/OpenMMSwig.cxx:71210:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 71210 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomCentroidBondForce_setBondParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:71164:25: note: declared here 71164 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_CustomCentroidBondForce_addBond__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomCentroidBondForce_addBond(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:71079:63: src/swig_doxygen/OpenMMSwig.cxx:70987:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 70987 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomCentroidBondForce_addBond(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:70945:25: note: declared here 70945 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_CustomCentroidBondForce_setGroupParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomCentroidBondForce_setGroupParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:70921:76: src/swig_doxygen/OpenMMSwig.cxx:70811:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 70811 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomCentroidBondForce_setGroupParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:70765:25: note: declared here 70765 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_CustomCentroidBondForce_addGroup__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomCentroidBondForce_addGroup(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:70680:64: src/swig_doxygen/OpenMMSwig.cxx:70588:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 70588 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomCentroidBondForce_addGroup(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:70546:25: note: declared here 70546 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_CustomCompoundBondForce_setBondParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomCompoundBondForce_setBondParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:48612:75: src/swig_doxygen/OpenMMSwig.cxx:48502:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 48502 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomCompoundBondForce_setBondParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:48456:25: note: declared here 48456 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_CustomCompoundBondForce_addBond__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomCompoundBondForce_addBond(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:48371:63: src/swig_doxygen/OpenMMSwig.cxx:48279:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 48279 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomCompoundBondForce_addBond(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:48237:25: note: declared here 48237 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_new_LocalCoordinatesSite__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_LocalCoordinatesSite(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:45543:60: src/swig_doxygen/OpenMMSwig.cxx:45192:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 45192 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_LocalCoordinatesSite(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:45124:25: note: declared here 45124 | std::vector< double > v2 ; | ^~ In function 'PyObject* _wrap_new_LocalCoordinatesSite__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_LocalCoordinatesSite(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:45543:60: src/swig_doxygen/OpenMMSwig.cxx:45193:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 45193 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_LocalCoordinatesSite(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:45126:25: note: declared here 45126 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_new_LocalCoordinatesSite__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_LocalCoordinatesSite(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:45543:60: src/swig_doxygen/OpenMMSwig.cxx:45194:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 45194 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_LocalCoordinatesSite(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:45128:25: note: declared here 45128 | std::vector< double > v4 ; | ^~ x86_64-linux-gnu-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--as-needed -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" build/temp.linux-x86_64-cpython-311/src/swig_doxygen/OpenMMSwig.o -L/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,--enable-new-dtags,-R/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu -lOpenMM -lOpenMMAmoeba -lOpenMMRPMD -lOpenMMDrude -o /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/_openmm.cpython-311-x86_64-linux-gnu.so building 'openmm.app.internal.compiled' extension creating build/temp.linux-x86_64-cpython-311/openmm creating build/temp.linux-x86_64-cpython-311/openmm/app creating build/temp.linux-x86_64-cpython-311/openmm/app/internal x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -fPIC -I/usr/include/python3.11 -c openmm/app/internal/compiled.cpp -o build/temp.linux-x86_64-cpython-311/openmm/app/internal/compiled.o cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ x86_64-linux-gnu-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--as-needed -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" build/temp.linux-x86_64-cpython-311/openmm/app/internal/compiled.o -L/usr/lib/x86_64-linux-gnu -o /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/compiled.cpython-311-x86_64-linux-gnu.so building 'openmm.app.internal.xtc_utils' extension creating build/temp.linux-x86_64-cpython-311/openmm/app/internal/xtc_utils creating build/temp.linux-x86_64-cpython-311/openmm/app/internal/xtc_utils/src x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -fPIC -Iopenmm/app/internal/xtc_utils -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include -I/usr/lib/python3/dist-packages/numpy/core/include -Iopenmm/app/internal/xtc_utils/include -Iopenmm/app/internal/xtc_utils/ -I/usr/include/python3.11 -c openmm/app/internal/xtc_utils/src/xdrfile.cpp -o build/temp.linux-x86_64-cpython-311/openmm/app/internal/xtc_utils/src/xdrfile.o cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ openmm/app/internal/xtc_utils/src/xdrfile.cpp: In function 'int sizeofint(int)': openmm/app/internal/xtc_utils/src/xdrfile.cpp:454:17: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 454 | while (size >= num && num_of_bits < 32) | ~~~~~^~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp: In function 'int sizeofints(int, unsigned int*)': openmm/app/internal/xtc_utils/src/xdrfile.cpp:500:32: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 500 | while (bytes[num_of_bytes] >= num) | ~~~~~~~~~~~~~~~~~~~~^~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp: In function 'void encodeints(int*, int, int, unsigned int*, unsigned int*)': openmm/app/internal/xtc_utils/src/xdrfile.cpp:609:21: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 609 | if (num_of_bits >= num_of_bytes * 8) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:611:31: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 611 | for (i = 0; i < num_of_bytes; i++) | ~~^~~~~~~~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:619:31: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 619 | for (i = 0; i < num_of_bytes-1; i++) | ~~^~~~~~~~~~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp: In function 'int decodebits(int*, int)': openmm/app/internal/xtc_utils/src/xdrfile.cpp:659:30: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 659 | if (lastbits < num_of_bits) | ~~~~~~~~~^~~~~~~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp: In function 'int xdrfile_decompress_coord_float(float*, int*, float*, XDRFILE*)': openmm/app/internal/xtc_utils/src/xdrfile.cpp:780:17: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 780 | if(size3>xfp->buf1size) | ~~~~~^~~~~~~~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:837:26: warning: comparison of integer expressions of different signedness: 'long unsigned int' and 'int' [-Wsign-compare] 837 | maxidx = (LASTIDX= size3 ) { return -1; } | ~~~~~~~~~^~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:930:45: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 930 | if(countmjh >= size3 ) { return -1; } | ~~~~~~~~~^~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:933:45: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 933 | if(countmjh >= size3 ) { return -1; } | ~~~~~~~~~^~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:940:45: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 940 | if(countmjh >= size3 ) { return -1; } | ~~~~~~~~~^~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:943:45: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 943 | if(countmjh >= size3 ) { return -1; } | ~~~~~~~~~^~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:946:45: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 946 | if(countmjh >= size3 ) { return -1; } | ~~~~~~~~~^~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:751:24: warning: variable 'minidx' set but not used [-Wunused-but-set-variable] 751 | int smallidx, minidx, maxidx; | ^~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:754:32: warning: variable 'larger' set but not used [-Wunused-but-set-variable] 754 | int smallnum, smaller, larger, i, is_smaller, run; | ^~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:758:13: warning: unused variable 'errval' [-Wunused-variable] 758 | int errval=1; | ^~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp: In function 'int xdrfile_compress_coord_float(float*, int, float, XDRFILE*)': openmm/app/internal/xtc_utils/src/xdrfile.cpp:1006:17: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 1006 | if(size3>xfp->buf1size) | ~~~~~^~~~~~~~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:1063:41: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 1063 | countmjh++; if( countmjh> size3) { return -1; } | ~~~~~~~~^~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:1079:35: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 1079 | countmjh++; if( countmjh> size3) { return -1; } | ~~~~~~~~^~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:1093:35: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 1093 | countmjh++; if( countmjh> size3) { return -1; } | ~~~~~~~~^~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:1132:25: warning: comparison of integer expressions of different signedness: 'int' and 'long unsigned int' [-Wsign-compare] 1132 | while (smallidx < LASTIDX && magicints[smallidx] < mindiff) | ^ openmm/app/internal/xtc_utils/src/xdrfile.cpp:1138:26: warning: comparison of integer expressions of different signedness: 'long unsigned int' and 'int' [-Wsign-compare] 1138 | maxidx = (LASTIDXxfp->buf1size) | ~~~~~^~~~~~~~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:1372:26: warning: comparison of integer expressions of different signedness: 'long unsigned int' and 'int' [-Wsign-compare] 1372 | maxidx = (LASTIDXxfp->buf1size) { | ~~~~~^~~~~~~~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:1623:25: warning: comparison of integer expressions of different signedness: 'int' and 'long unsigned int' [-Wsign-compare] 1623 | while (smallidx < LASTIDX && magicints[smallidx] < mindiff) { | ^ openmm/app/internal/xtc_utils/src/xdrfile.cpp:1628:26: warning: comparison of integer expressions of different signedness: 'long unsigned int' and 'int' [-Wsign-compare] 1628 | maxidx = (LASTIDX tags get executed. ... ok test_LennardJonesGenerator (TestForceField.TestForceField.test_LennardJonesGenerator) Test the LennardJones generator ... ok test_MultipleFilesandForceTags (TestForceField.TestForceField.test_MultipleFilesandForceTags) Test that the order of listing of multiple ffxmls does not matter. ... ok test_NBFix (TestForceField.TestForceField.test_NBFix) Test using LennardJonesGenerator to implement NBFix terms. ... ok test_NonbondedMethod (TestForceField.TestForceField.test_NonbondedMethod) Test all six options for the nonbondedMethod parameter. ... ok test_Opc3Energy (TestForceField.TestForceField.test_Opc3Energy) ... ok test_OpcEnergy (TestForceField.TestForceField.test_OpcEnergy) ... ok test_PeriodicBoxVectors (TestForceField.TestForceField.test_PeriodicBoxVectors) Test setting the periodic box vectors. ... ok test_ProgrammaticForceField (TestForceField.TestForceField.test_ProgrammaticForceField) Test building a ForceField programmatically. ... ok test_RemoveCMMotion (TestForceField.TestForceField.test_RemoveCMMotion) Test both options (True and False) for the removeCMMotion parameter. ... ok test_ResidueAttributes (TestForceField.TestForceField.test_ResidueAttributes) Test a ForceField that gets per-particle parameters from residue attributes. ... ok test_ResidueOverriding (TestForceField.TestForceField.test_ResidueOverriding) Test residue overriding via override tag in the XML ... ok test_ResidueTemplateUserChoice (TestForceField.TestForceField.test_ResidueTemplateUserChoice) Test createSystem does not allow multiple matching templates, unless ... ok test_RigidWaterAndConstraints (TestForceField.TestForceField.test_RigidWaterAndConstraints) Test all eight options for the constraints and rigidWater parameters. ... ok test_ScalingFactorCombining (TestForceField.TestForceField.test_ScalingFactorCombining) Tests that FFs can be combined if their scaling factors are very close ... ok test_SwitchingDistance (TestForceField.TestForceField.test_SwitchingDistance) Test that the switchDistance parameter is processed correctly. ... ok test_UnusedArgs (TestForceField.TestForceField.test_UnusedArgs) Test that specifying an argument that is never used throws an exception. ... ok test_Wildcard (TestForceField.TestForceField.test_Wildcard) Test that PeriodicTorsionForces using wildcard ('') for atom types / classes in the ffxml are correctly registered ... ok test_flexibleConstraints (TestForceField.TestForceField.test_flexibleConstraints) Test the flexibleConstraints keyword ... ok test_generateTemplatesForUnmatchedResidues (TestForceField.TestForceField.test_generateTemplatesForUnmatchedResidues) Test generation of blank forcefield residue templates for unmatched residues. ... ok test_getMatchingTemplates (TestForceField.TestForceField.test_getMatchingTemplates) Test retrieval of list of templates that match residues in a topology. ... ok test_getUnmatchedResidues (TestForceField.TestForceField.test_getUnmatchedResidues) Test retrieval of list of residues for which no templates are available. ... ok test_residueMatcher (TestForceField.TestForceField.test_residueMatcher) Test using a custom template matcher to select templates. ... ok test_residueTemplateGenerator (TestForceField.TestForceField.test_residueTemplateGenerator) Test the ability to add residue template generators to parameterize unmatched residues. ... ok test1 (TestForceGroups.TestForceGroups.test1) ... ok test2 (TestForceGroups.TestForceGroups.test2) ... ok test3 (TestForceGroups.TestForceGroups.test3) ... ok test_CustomHbondGenerator (TestGenerators.TestGenerators.test_CustomHbondGenerator) Test the generator for CustomHbondForce. ... ok test_CustomHbondGenerator2 (TestGenerators.TestGenerators.test_CustomHbondGenerator2) Test the generator for CustomHbondForce with different parameters. ... ok test_Triclinic (TestGromacsGroFile.TestGromacsGroFile.test_Triclinic) Test parsing a file that describes a triclinic box. ... ok test_Cutoff (TestGromacsTopFile.TestGromacsTopFile.test_Cutoff) Test to make sure the nonbondedCutoff parameter is passed correctly. ... skipped 'GROMACS is not installed' test_EwaldErrorTolerance (TestGromacsTopFile.TestGromacsTopFile.test_EwaldErrorTolerance) Test to make sure the ewaldErrorTolerance parameter is passed correctly. ... skipped 'GROMACS is not installed' test_GROMOS (TestGromacsTopFile.TestGromacsTopFile.test_GROMOS) Test a system using the GROMOS 54a7 force field. ... skipped 'GROMACS is not installed' test_HydrogenMass (TestGromacsTopFile.TestGromacsTopFile.test_HydrogenMass) Test that altering the mass of hydrogens works correctly. ... skipped 'GROMACS is not installed' test_NonbondedMethod (TestGromacsTopFile.TestGromacsTopFile.test_NonbondedMethod) Test all six options for the nonbondedMethod parameter. ... skipped 'GROMACS is not installed' test_RemoveCMMotion (TestGromacsTopFile.TestGromacsTopFile.test_RemoveCMMotion) Test both options (True and False) for the removeCMMotion parameter. ... skipped 'GROMACS is not installed' test_RigidWaterAndConstraints (TestGromacsTopFile.TestGromacsTopFile.test_RigidWaterAndConstraints) Test all eight options for the constraints and rigidWater parameters. ... skipped 'GROMACS is not installed' test_SMOG (TestGromacsTopFile.TestGromacsTopFile.test_SMOG) Test to ensure that SMOG models can be run without problems ... skipped 'GROMACS is not installed' test_SwitchingFunction (TestGromacsTopFile.TestGromacsTopFile.test_SwitchingFunction) Test using a switching function. ... skipped 'GROMACS is not installed' test_VirtualParticle (TestGromacsTopFile.TestGromacsTopFile.test_VirtualParticle) Test virtual particle works correctly. ... skipped 'GROMACS is not installed' test_Vsite3 (TestGromacsTopFile.TestGromacsTopFile.test_Vsite3) Test a three particle virtual site. ... skipped 'GROMACS is not installed' test_ff99SBILDN (TestGromacsTopFile.TestGromacsTopFile.test_ff99SBILDN) Test Gromacs topology #define replacement as used in ff99SB-ILDN ... skipped 'GROMACS is not installed' test_ionic (TestGromacsTopFile.TestGromacsTopFile.test_ionic) Test simulating an ionic liquid ... skipped 'GROMACS is not installed' testBadGroups (TestIntegrators.TestIntegrators.testBadGroups) Test the MTS integrator with bad force group substeps. ... ok testDrudeNoseHooverIntegrator (TestIntegrators.TestIntegrators.testDrudeNoseHooverIntegrator) Test the DrudeNoseHooverIntegrator ... skipped 'Skipping test failing due to missing platforms' testMTSIntegratorConstraints (TestIntegrators.TestIntegrators.testMTSIntegratorConstraints) Test the MTS integrator energy conservation on a system of constrained particles with no inner force (just constraints) ... ok testMTSIntegratorExplicit (TestIntegrators.TestIntegrators.testMTSIntegratorExplicit) Test the MTS integrator on an explicit solvent system ... ok testMTSLangevinIntegrator (TestIntegrators.TestIntegrators.testMTSLangevinIntegrator) Test the MTSLangevinIntegrator on an explicit solvent system ... ok testMTSLangevinIntegratorFriction (TestIntegrators.TestIntegrators.testMTSLangevinIntegratorFriction) Test the MTSLangevinIntegrator on a force-free particle to ensure friction is properly accounted for (issue #3790) ... ok testNoseHooverIntegrator (TestIntegrators.TestIntegrators.testNoseHooverIntegrator) Test partial thermostating in the NoseHooverIntegrator (only API) ... ok testHarmonicOscillator (TestMetadynamics.TestMetadynamics.testHarmonicOscillator) Test running metadynamics on a harmonic oscillator. ... ok test_add (TestModeller.TestModeller.test_add) Test the add() method. ... ok test_addExtraParticles (TestModeller.TestModeller.test_addExtraParticles) Test addExtraParticles(). ... ok test_addHydrogensASH (TestModeller.TestModeller.test_addHydrogensASH) Test of addHydrogens() in which we force ASH to be a variant using the variants parameter. ... ok test_addHydrogensCYX (TestModeller.TestModeller.test_addHydrogensCYX) Test of addHydrogens() in which we force CYX to be a variant using the variants parameter. ... ok test_addHydrogensGLH (TestModeller.TestModeller.test_addHydrogensGLH) Test of addHydrogens() in which we force GLH to be a variant using the variants parameter. ... ok test_addHydrogensGlycam (TestModeller.TestModeller.test_addHydrogensGlycam) Test adding hydrogens for GLYCAM. ... ok test_addHydrogensLYN (TestModeller.TestModeller.test_addHydrogensLYN) Test of addHydrogens() in which we force LYN to be a variant using the variants parameter. ... ok test_addHydrogensPdb2 (TestModeller.TestModeller.test_addHydrogensPdb2) Test the addHydrogens() method on the T4-lysozyme-L99A pdb file. ... ok test_addHydrogensPdb3 (TestModeller.TestModeller.test_addHydrogensPdb3) Test the addHydrogens() method on the metallothionein pdb file. ... ok test_addHydrogensPdb3_keepPositions (TestModeller.TestModeller.test_addHydrogensPdb3_keepPositions) Test addHydrogens() does not change existing Hs positions ... ok test_addHydrogenspH11 (TestModeller.TestModeller.test_addHydrogenspH11) Test of addHydrogens() with pH=11. ... ok test_addHydrogenspH4 (TestModeller.TestModeller.test_addHydrogenspH4) Test of addHydrogens() with pH=4. ... ok test_addHydrogenspH9 (TestModeller.TestModeller.test_addHydrogenspH9) Test of addHydrogens() with pH=9. ... ok test_addMembrane (TestModeller.TestModeller.test_addMembrane) Test adding a membrane to a realistic system. ... skipped 'Skipping a test which takes too long' test_addSolventBoxShape (TestModeller.TestModeller.test_addSolventBoxShape) Test the addSolvent() method; test the different box shapes. ... ok test_addSolventIons (TestModeller.TestModeller.test_addSolventIons) Test the addSolvent() method with all possible choices for positive and negative ions. ... ok test_addSolventNegativeSolvent (TestModeller.TestModeller.test_addSolventNegativeSolvent) Test the addSolvent() method; test adding ions to a negatively charged solvent. ... ok test_addSolventNeutralSolvent (TestModeller.TestModeller.test_addSolventNeutralSolvent) Test the addSolvent() method; test adding ions to neutral solvent. ... ok test_addSolventPeriodicBox (TestModeller.TestModeller.test_addSolventPeriodicBox) Test the addSolvent() method; test that the five ways of passing in the periodic box all work. ... ok test_addSolventPositiveSolvent (TestModeller.TestModeller.test_addSolventPositiveSolvent) Test the addSolvent() method; test adding ions to a positively charged solvent. ... ok test_addSolventWaterModels (TestModeller.TestModeller.test_addSolventWaterModels) Test all addSolvent() method with all possible water models. ... ok test_addVirtualSites (TestModeller.TestModeller.test_addVirtualSites) Test adding extra particles defined by virtual sites. ... ok test_convertWater (TestModeller.TestModeller.test_convertWater) Test the convertWater() method. ... ok test_delete (TestModeller.TestModeller.test_delete) Test the delete() method. ... ok test_deleteWater (TestModeller.TestModeller.test_deleteWater) Test the deleteWater() method. ... ok test_multiSiteIon (TestModeller.TestModeller.test_multiSiteIon) Test adding extra particles whose positions are determined based on bonds. ... ok test_removeExtraHydrogens (TestModeller.TestModeller.test_removeExtraHydrogens) Test that addHydrogens() can remove hydrogens that shouldn't be there. ... ok test_CMAP (TestNumpyCompatibility.TestNumpyCompatibility.test_CMAP) ... ok test_int64 (TestNumpyCompatibility.TestNumpyCompatibility.test_int64) ... ok test_periodicBoxVectors (TestNumpyCompatibility.TestNumpyCompatibility.test_periodicBoxVectors) ... ok test_setPositions (TestNumpyCompatibility.TestNumpyCompatibility.test_setPositions) ... ok test_setPositions_units (TestNumpyCompatibility.TestNumpyCompatibility.test_setPositions_units) ... ok test_setVelocities (TestNumpyCompatibility.TestNumpyCompatibility.test_setVelocities) ... ok test_setVelocities_units (TestNumpyCompatibility.TestNumpyCompatibility.test_setVelocities_units) ... ok test_tabulatedFunction (TestNumpyCompatibility.TestNumpyCompatibility.test_tabulatedFunction) ... ok testNumpyAttributes (TestNumpyCompatibility.TestNumpyUnits.testNumpyAttributes) ... ok testAlaAlaAla (TestPatches.TestPatches.testAlaAlaAla) Test constructing a System that involves two patches. ... ok testApplyPatch (TestPatches.TestPatches.testApplyPatch) Test applying a patch to a template. ... ok testDisulfidePatch (TestPatches.TestPatches.testDisulfidePatch) ... ok testParseMultiresiduePatch (TestPatches.TestPatches.testParseMultiresiduePatch) Test parsing a tag that affects two residues. ... ok testParsePatch (TestPatches.TestPatches.testParsePatch) Test parsing a tag. ... ok test_AltLocs (TestPdbFile.TestPdbFile.test_AltLocs) Test reading a file that includes AltLocs ... ok test_BinaryStream (TestPdbFile.TestPdbFile.test_BinaryStream) Test reading a stream that was opened in binary mode. ... ok test_ExtraParticles (TestPdbFile.TestPdbFile.test_ExtraParticles) Test reading, and writing and re-reading of a file containing extra particle atoms. ... ok test_LargeFile (TestPdbFile.TestPdbFile.test_LargeFile) Write and read a file with more than 100,000 atoms ... ok test_Triclinic (TestPdbFile.TestPdbFile.test_Triclinic) Test parsing a file that describes a triclinic box. ... ok test_WriteFile (TestPdbFile.TestPdbFile.test_WriteFile) Write a file, read it back, and make sure it matches the original. ... ok testBondSubset (TestPdbReporter.TestPDBReporter.testBondSubset) Test that CONECT records are output correctly when using atomSubset ... ok testInvalidSubsets (TestPdbReporter.TestPDBReporter.testInvalidSubsets) Test that an exception is raised when the indices in atomSubset are invalid ... ok testSubset (TestPdbReporter.TestPDBReporter.testSubset) Test writing out a subset of atoms ... ok testWriteAll (TestPdbReporter.TestPDBReporter.testWriteAll) Test all atoms are written when atomSubset is not specified ... ok testBondSubset (TestPdbReporter.TestPDBxReporter.testBondSubset) Test that struct_conn records are output correctly when using atomSubset ... ok testInvalidSubsets (TestPdbReporter.TestPDBxReporter.testInvalidSubsets) Test that an exception is raised when the indices in atomSubset are invalid ... ok testSubset (TestPdbReporter.TestPDBxReporter.testSubset) Test writing out a subset of atoms ... ok testWriteAll (TestPdbReporter.TestPDBxReporter.testWriteAll) Test all atoms are written when atomSubset is not specified ... ok testBonds (TestPdbxFile.TestPdbxFile.testBonds) Test reading and writing a file that includes bonds. ... ok testInsertionCodes (TestPdbxFile.TestPdbxFile.testInsertionCodes) Test reading a file that uses insertion codes. ... ok testMultiChain (TestPdbxFile.TestPdbxFile.testMultiChain) Test reading and writing a file that includes multiple chains ... ok testReporterExplicit (TestPdbxFile.TestPdbxFile.testReporterExplicit) Tests the PDBxReporter with PBC ... ok testReporterImplicit (TestPdbxFile.TestPdbxFile.testReporterImplicit) Tests the PDBxReporter without PBC ... ok test_FormatConversion (TestPdbxFile.TestPdbxFile.test_FormatConversion) Test conversion from PDB to PDBx ... ok test_Triclinic (TestPdbxFile.TestPdbxFile.test_Triclinic) Test parsing a file that describes a triclinic box. ... ok testCopyForce (TestPickle.TestPickle.testCopyForce) Test copying a Python object whose class extends Force. ... ok testCopyIntegrator (TestPickle.TestPickle.testCopyIntegrator) Test copying a Python object whose class extends Integrator. ... ok test_deepcopy (TestPickle.TestPickle.test_deepcopy) Test that serialization/deserialization works (via deepcopy). ... ok testHarmonicOscillator (TestSimulatedTempering.TestSimulatedTempering.testHarmonicOscillator) Test running simulated tempering on a harmonic oscillator. ... ok testHarmonicOscillatorNPT (TestSimulatedTempering.TestSimulatedTempering.testHarmonicOscillatorNPT) Test running simulated tempering on a harmonic oscillator with a Monte Carlo barostat. ... ok testCheckpointing (TestSimulation.TestSimulation.testCheckpointing) Test that checkpointing works correctly. ... ok testLoadFromXML (TestSimulation.TestSimulation.testLoadFromXML) Test creating a Simulation from XML files ... ok testMinimizationReporter (TestSimulation.TestSimulation.testMinimizationReporter) Test invoking a reporter during minimization. ... ok testRunForClockTime (TestSimulation.TestSimulation.testRunForClockTime) Test the runForClockTime() method. ... ok testSaveState (TestSimulation.TestSimulation.testSaveState) Test that saving States works correctly. ... ok testStep (TestSimulation.TestSimulation.testStep) Test the step() method. ... ok testWrappedCoordinates (TestSimulation.TestSimulation.testWrappedCoordinates) Test generating reports with and without wrapped coordinates. ... ok testAppend (TestStateDataReporter.TestStateDataReporter.testAppend) Test appending to the StateDataReporter output. ... /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/tests/TestStateDataReporter.py:33: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmpx51o_1uq/templog.txt' mode='r' encoding='utf-8'> lines = open(filename).read().split('\n') ResourceWarning: Enable tracemalloc to get the object allocation traceback ok test_1 (TestSwigWrappers.TestSwigWrappers.test_1) ... ok test_bondtype_singleton (TestTopology.TestTopology.test_bondtype_singleton) Tests that the bond types are really singletons ... ok test_getters (TestTopology.TestTopology.test_getters) Test getters for number of atoms, residues, chains. ... ok test_residue_bonds (TestTopology.TestTopology.test_residue_bonds) Test retrieving bonds for a residue produces expected results. ... ok testComputePBCVectors (TestUnitCell.TestUnitCell.testComputePBCVectors) Tests computing periodic box vectors ... ok testReducePBCVectors (TestUnitCell.TestUnitCell.testReducePBCVectors) Checks that reducePeriodicBoxVectors properly reduces vectors ... ok testMultiplication (TestUnits.TestNumpyUnits.testMultiplication) Tests that units override numpy.ndarray multiplication ... ok testNumpyDeepCopy (TestUnits.TestNumpyUnits.testNumpyDeepCopy) Check that deepcopy on numpy array does not strip units ... ok testNumpyDivision (TestUnits.TestNumpyUnits.testNumpyDivision) Tests that division of numpy Quantities works correctly ... ok testNumpyFunctions (TestUnits.TestNumpyUnits.testNumpyFunctions) Tests various numpy attributes that they result in Quantities ... ok testNumpyIsString (TestUnits.TestNumpyUnits.testNumpyIsString) Tests the internal _is_string method with numpy Quantities ... ok testNumpyQuantity (TestUnits.TestNumpyUnits.testNumpyQuantity) Tests that numpy arrays can form Quantity values ... ok testAngleQuantities (TestUnits.TestUnits.testAngleQuantities) Tests angle measurements ... ok testBadQuantityComparisons (TestUnits.TestUnits.testBadQuantityComparisons) Checks that comparisons of incompatible units fails ... ok testBadQuantityConversions (TestUnits.TestUnits.testBadQuantityConversions) Tests that conversions to incompatible units fails ... ok testBadQuantityMaths (TestUnits.TestUnits.testBadQuantityMaths) Tests that Maths of incompatible units properly fails ... ok testBaseScaleMix (TestUnits.TestUnits.testBaseScaleMix) Test mixing of BaseUnit and ScaledUnit instances ... ok testBaseUnit (TestUnits.TestUnits.testBaseUnit) Tests the creation of a base unit furlong ... ok testCalorieConversion (TestUnits.TestUnits.testCalorieConversion) Tests unit conversion with calories to joules ... ok testChemistryProblems (TestUnits.TestUnits.testChemistryProblems) Tests some gen-chem applications with Quantity's ... ok testCollectionQuantities (TestUnits.TestUnits.testCollectionQuantities) Tests the use of collections as Quantity values ... ok testCollectionQuantityOperations (TestUnits.TestUnits.testCollectionQuantityOperations) Tests that Quantity collections behave correctly ... ok testComparisonOperators (TestUnits.TestUnits.testComparisonOperators) Tests unit comparison operators ... ok testCompositeUnits (TestUnits.TestUnits.testCompositeUnits) Tests the creation of a composite unit ... ok testConversionFactorTo (TestUnits.TestUnits.testConversionFactorTo) Tests the "conversion_factor_to" attribute of Units ... ok testCreateNewBaseUnit (TestUnits.TestUnits.testCreateNewBaseUnit) Tests creating a new base unit ... ok testCreateNewScaledUnit (TestUnits.TestUnits.testCreateNewScaledUnit) Tests creating a new ScaledUnit ... ok testCreateNewUnit (TestUnits.TestUnits.testCreateNewUnit) Tests creating a new Unit ... ok testDimensionless (TestUnits.TestUnits.testDimensionless) Tests the properties of unit.dimensionless ... ok testGetUnitAttributes (TestUnits.TestUnits.testGetUnitAttributes) Tests the unit attribute `getters' ... ok testIllegalQuantityOps (TestUnits.TestUnits.testIllegalQuantityOps) Test that illegal operations on Quantity objects fails ... ok testIsCompatible (TestUnits.TestUnits.testIsCompatible) Tests the is_compatible attribute of units ... ok testIsQuantity (TestUnits.TestUnits.testIsQuantity) Tests if is_quantity can detect Quantities vs. scalars and units ... ok testIsUnit (TestUnits.TestUnits.testIsUnit) Tests the unit.is_unit introspective function ... ok testMisc (TestUnits.TestUnits.testMisc) Miscellaneous tests for the unit package ... ok testMutableQuantityOperations (TestUnits.TestUnits.testMutableQuantityOperations) Tests that mutable Quantity objects do not get unexpectedly changed ... ok testPresetUnitSystems (TestUnits.TestUnits.testPresetUnitSystems) Tests some of the pre-set UnitSystem's ... ok testQuantityBadSqrt (TestUnits.TestUnits.testQuantityBadSqrt) Tests that taking sqrt of Quantities with incompatible units fails ... ok testQuantityCollectionMethods (TestUnits.TestUnits.testQuantityCollectionMethods) Tests some sequence methods on Quantity objects (no numpy) ... ok testQuantityComparisons (TestUnits.TestUnits.testQuantityComparisons) Tests binary comparison operators between Quantity ... ok testQuantityComplicatedMaths (TestUnits.TestUnits.testQuantityComplicatedMaths) Tests a complicated set of mathematical operations on a Quantity ... ok testQuantityFormat (TestUnits.TestUnits.testQuantityFormat) Tests the format method on Quantity instances ... ok testQuantityMaths (TestUnits.TestUnits.testQuantityMaths) Tests dimensional analysis & maths on and b/w Quantity objects ... ok testQuantitySqrt (TestUnits.TestUnits.testQuantitySqrt) Tests taking the square root of quantities ... ok testReduceUnit (TestUnits.TestUnits.testReduceUnit) Tests the reduce_unit functionality ... ok testScalarQuantityConstructor (TestUnits.TestUnits.testScalarQuantityConstructor) Tests creating a Quantity using the Quantity constructor ... ok testScalarQuantityMultiplyDivide (TestUnits.TestUnits.testScalarQuantityMultiplyDivide) Tests creating a scalar Quantity object by * or / by a Unit ... ok testScaledUnit (TestUnits.TestUnits.testScaledUnit) Tests ScaledUnit class with kilokelvins ... ok testString (TestUnits.TestUnits.testString) Tests unit handling with strings, which should be dimensionless ... ok testToBaseUnit (TestUnits.TestUnits.testToBaseUnit) Tests the "get_conversion_factor_to_base_units" method ... ok testTruthiness (TestUnits.TestUnits.testTruthiness) Tests the truthiness of units ... ok testUnaryOperators (TestUnits.TestUnits.testUnaryOperators) Tests unary operators on units ... ok testUnitBadSqrt (TestUnits.TestUnits.testUnitBadSqrt) Tests that illegal sqrt calls on incompatible units fails ... ok testUnitDivision (TestUnits.TestUnits.testUnitDivision) Tests the division of units and is_dimensionless ... ok testUnitMathModule (TestUnits.TestUnits.testUnitMathModule) Tests the unit_math functions on Quantity objects ... ok testUnitMathModuleBadInput (TestUnits.TestUnits.testUnitMathModuleBadInput) Tests that bad units to unit_math fails appropriately ... ok testUnitSqrt (TestUnits.TestUnits.testUnitSqrt) Tests taking the square root of units ... ok testUnitString (TestUnits.TestUnits.testUnitString) Test the Unit->str casting functionality ... ok testUnitSystem (TestUnits.TestUnits.testUnitSystem) Tests the creation of a UnitSystem and its behavior ... ok testValueInUnit (TestUnits.TestUnits.testValueInUnit) Tests the value_in_unit functionality for Quantity ... ok testNegation (TestVec3.TestVectors.testNegation) ... ok testVec3Addition (TestVec3.TestVectors.testVec3Addition) ... ok testVec3Attributes (TestVec3.TestVectors.testVec3Attributes) ... ok testVec3Division (TestVec3.TestVectors.testVec3Division) ... ok testVec3Equality (TestVec3.TestVectors.testVec3Equality) ... ok testVec3Multiplication (TestVec3.TestVectors.testVec3Multiplication) ... ok testVec3Subtraction (TestVec3.TestVectors.testVec3Subtraction) ... ok testAppend (TestXtcFile.TestXtcFile.testAppend) Test appending to an existing trajectory. ... ok testLongTrajectory (TestXtcFile.TestXtcFile.testLongTrajectory) Test writing a trajectory that has more than 2^31 steps. ... ok test_xtc_box_from_topology (TestXtcFile.TestXtcFile.test_xtc_box_from_topology) Test the XTC file by writing a trajectory and reading it back. Letting the box be set from the topology ... ok test_xtc_cubic (TestXtcFile.TestXtcFile.test_xtc_cubic) Test the XTC file by writing a trajectory and reading it back. Using a cubic box ... ok test_xtc_triclinic (TestXtcFile.TestXtcFile.test_xtc_triclinic) Test the XTC file by writing a trajectory and reading it back. Using a triclinic box ... ok ---------------------------------------------------------------------- Ran 327 tests in 4178.963s OK (skipped=21) #"Steps" "Temperature (K)" "200K Weight" "216.012K Weight" "233.306K Weight" "251.984K Weight" "272.158K Weight" "293.947K Weight" "317.48K Weight" "342.898K Weight" "370.35K Weight" "400K Weight" 10000 293.947 0 -0.0234375 -0.0234375 0.078125 -0.226562 -0.226562 -0.203125 -0.210938 -0.359375 -0.132812 20000 400 0 -0.00640869 -0.062561 -0.0124512 -0.214172 -0.279541 -0.267639 -0.268127 -0.381104 -0.248535 30000 400 0 -0.00592709 -0.061748 -0.0123758 -0.213614 -0.279211 -0.267005 -0.267176 -0.380225 -0.248608 40000 370.35 0 -0.00592478 -0.0617484 -0.0123778 -0.213611 -0.279205 -0.267001 -0.267172 -0.380219 -0.248609 50000 293.947 0 -0.00592475 -0.0617484 -0.0123778 -0.213611 -0.279205 -0.267001 -0.267172 -0.380219 -0.248609 60000 272.158 0 -0.00592475 -0.0617484 -0.0123778 -0.213611 -0.279205 -0.267001 -0.267172 -0.380219 -0.248609 70000 200 0 -0.00592475 -0.0617484 -0.0123778 -0.213611 -0.279205 -0.267001 -0.267172 -0.380219 -0.248609 80000 400 0 -0.00592475 -0.0617484 -0.0123778 -0.213611 -0.279205 -0.267001 -0.267172 -0.380219 -0.248609 90000 317.48 0 -0.00592475 -0.0617484 -0.0123778 -0.213611 -0.279205 -0.267001 -0.267172 -0.380219 -0.248609 100000 293.947 0 -0.00592475 -0.0617484 -0.0123778 -0.213611 -0.279205 -0.267001 -0.267172 -0.380219 -0.248609 110000 272.158 0 -0.00592475 -0.0617484 -0.0123778 -0.213611 -0.279205 -0.267001 -0.267172 -0.380219 -0.248609 #"Steps" "Temperature (K)" "200K Weight" "216.012K Weight" "233.306K Weight" "251.984K Weight" "272.158K Weight" "293.947K Weight" "317.48K Weight" "342.898K Weight" "370.35K Weight" "400K Weight" I: pybuild pybuild:308: cp -r /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build I: pybuild base:311: cd /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build; python3.11 -m unittest discover -v --start-directory tests -p 'Test*' testATMForce (TestAPIUnits.TestAPIUnits.testATMForce) Tests the ATMForce API features ... ok testAmoebaMultipoleForce (TestAPIUnits.TestAPIUnits.testAmoebaMultipoleForce) Tests the AmoebaMultipoleForce API features ... ok testAmoebaTorsionTorsionForce (TestAPIUnits.TestAPIUnits.testAmoebaTorsionTorsionForce) Tests the AmoebaTorsionTorsionForce API features ... ok testAmoebaVdwForce (TestAPIUnits.TestAPIUnits.testAmoebaVdwForce) Tests the AmoebaVdwForce API features ... ok testAmoebaWcaDispersionForce (TestAPIUnits.TestAPIUnits.testAmoebaWcaDispersionForce) Tests the AmoebaWcaDispersionForce API features ... ok testAndersenThermostat (TestAPIUnits.TestAPIUnits.testAndersenThermostat) Tests the AndersenThermostat API features ... ok testBrownianIntegrator (TestAPIUnits.TestAPIUnits.testBrownianIntegrator) Tests the BrownianIntegrator API features ... ok testCmapForce (TestAPIUnits.TestAPIUnits.testCmapForce) Tests the CMAPTorsionForce API features ... ok testCustomAngleForce (TestAPIUnits.TestAPIUnits.testCustomAngleForce) Tests the CustomAngleForce API features ... ok testCustomBondForce (TestAPIUnits.TestAPIUnits.testCustomBondForce) Tests the CustomBondForce API features ... ok testCustomCompoundBondForce (TestAPIUnits.TestAPIUnits.testCustomCompoundBondForce) Tests the CustomCompoundBondForce API features ... ok testCustomExternalForce (TestAPIUnits.TestAPIUnits.testCustomExternalForce) Tests the CustomExternalForce API features ... ok testCustomGBForce (TestAPIUnits.TestAPIUnits.testCustomGBForce) Tests the CustomGBForce API features ... ok testCustomHBondForce (TestAPIUnits.TestAPIUnits.testCustomHBondForce) Tests the CustomHbondForce API features ... ok testCustomIntegrator (TestAPIUnits.TestAPIUnits.testCustomIntegrator) Tests the CustomIntegrator API features ... ok testCustomManyParticleForce (TestAPIUnits.TestAPIUnits.testCustomManyParticleForce) Tests the CustomManyParticleForce API features ... ok testCustomNonbondedForce (TestAPIUnits.TestAPIUnits.testCustomNonbondedForce) Tests the CustomNonbondedForce API features ... ok testCustomTorsionForce (TestAPIUnits.TestAPIUnits.testCustomTorsionForce) Tests the CustomTorsionForce API features ... ok testDrudeForce (TestAPIUnits.TestAPIUnits.testDrudeForce) Tests the DrudeForce API features ... ok testDrudeLangevinIntegrator (TestAPIUnits.TestAPIUnits.testDrudeLangevinIntegrator) Tests the DrudeLangevinIntegrator API features ... ok testDrudeNoseHooverIntegrator (TestAPIUnits.TestAPIUnits.testDrudeNoseHooverIntegrator) Tests the DrudeNoseHooverIntegrator API features ... ok testDrudeSCFIntegrator (TestAPIUnits.TestAPIUnits.testDrudeSCFIntegrator) Tests the DrudeSCFIntegrator API features ... ok testGeneralizedKirkwood (TestAPIUnits.TestAPIUnits.testGeneralizedKirkwood) Tests the AmoebaGeneralizedKirkwoodForce API features ... ok testHarmonicAngleForce (TestAPIUnits.TestAPIUnits.testHarmonicAngleForce) Tests HarmonicAngleForce API features ... ok testHarmonicBondForce (TestAPIUnits.TestAPIUnits.testHarmonicBondForce) Tests HarmonicBondForce API features ... ok testLangevinIntegrator (TestAPIUnits.TestAPIUnits.testLangevinIntegrator) Tests the LangevinIntegrator API features ... ok testMonteCarloMembraneBarostat (TestAPIUnits.TestAPIUnits.testMonteCarloMembraneBarostat) Tests the MonteCarloMembraneBarostat API features ... ok testNonbondedForce (TestAPIUnits.TestAPIUnits.testNonbondedForce) Tests the NonbondedForce API features ... ok testNoseHooverIntegrator (TestAPIUnits.TestAPIUnits.testNoseHooverIntegrator) Tests the NoseHooverIntegrator API features ... ok testPeriodicTorsionForce (TestAPIUnits.TestAPIUnits.testPeriodicTorsionForce) Tests PeriodicTorsionForce API features ... ok testRBTorsionForce (TestAPIUnits.TestAPIUnits.testRBTorsionForce) Tests the RBTorsionForce API features ... ok testVariableLangevinIntegrator (TestAPIUnits.TestAPIUnits.testVariableLangevinIntegrator) Tests the VariableLangevinIntegrator API features ... ok testVariableVerletIntegrator (TestAPIUnits.TestAPIUnits.testVariableVerletIntegrator) Tests the VariableVerletIntegrator API features ... ok testVerletIntegrator (TestAPIUnits.TestAPIUnits.testVerletIntegrator) Tests the VerletIntegrator API features ... ok test2ParticlesNonbonded (TestATMForce.TestATMForce.test2ParticlesNonbonded) Test for a Nonbonded force previously added to the System ... ok test_CrdBox (TestAmberInpcrdFile.TestAmberInpcrdFile.test_CrdBox) Test parsing ASCII restarts with only crds and box ... /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/amber_file_parser.py:1447: DeprecationWarning: `scipy.io.netcdf.NetCDFFile` is deprecated along with the `scipy.io.netcdf` namespace. `scipy.io.netcdf.NetCDFFile` will be removed in SciPy 1.14.0, and the `scipy.io.netcdf` namespace will be removed in SciPy 2.0.0. from scipy.io.netcdf import NetCDFFile ok test_CrdBoxTruncoct (TestAmberInpcrdFile.TestAmberInpcrdFile.test_CrdBoxTruncoct) ... ok test_CrdOnly (TestAmberInpcrdFile.TestAmberInpcrdFile.test_CrdOnly) ... ok test_CrdVel (TestAmberInpcrdFile.TestAmberInpcrdFile.test_CrdVel) ... ok test_CrdVelBox (TestAmberInpcrdFile.TestAmberInpcrdFile.test_CrdVelBox) Test parsing ASCII restarts with crds, vels, and box ... ok test_NetCDF (TestAmberInpcrdFile.TestAmberInpcrdFile.test_NetCDF) Test NetCDF restart file parsing ... ok testAmberCMAP (TestAmberPrmtopFile.TestAmberPrmtopFile.testAmberCMAP) Check that CMAP energy calcultion compared to AMber. ... ok testChamber (TestAmberPrmtopFile.TestAmberPrmtopFile.testChamber) Test a prmtop file created with Chamber. ... ok testEPConstraints (TestAmberPrmtopFile.TestAmberPrmtopFile.testEPConstraints) Test different types of constraints when using extra particles ... ok testGBneckRadii (TestAmberPrmtopFile.TestAmberPrmtopFile.testGBneckRadii) Tests that GBneck radii limits are correctly enforced ... ok testNucleicGBParametes (TestAmberPrmtopFile.TestAmberPrmtopFile.testNucleicGBParametes) Test that correct GB parameters are used for nucleic acids. ... /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/amber_file_parser.py:1168: UserWarning: Non-optimal GB parameters detected for GB model GBn warnings.warn( ok testSwitchFunction (TestAmberPrmtopFile.TestAmberPrmtopFile.testSwitchFunction) Tests the switching function option in AmberPrmtopFile ... ok testWaterBonds (TestAmberPrmtopFile.TestAmberPrmtopFile.testWaterBonds) Test that water molecules have the right set of bonds ... ok test_Cutoff (TestAmberPrmtopFile.TestAmberPrmtopFile.test_Cutoff) Test to make sure the nonbondedCutoff parameter is passed correctly. ... ok test_EwaldErrorTolerance (TestAmberPrmtopFile.TestAmberPrmtopFile.test_EwaldErrorTolerance) Test to make sure the ewaldErrorTolerance parameter is passed correctly. ... ok test_HAngle (TestAmberPrmtopFile.TestAmberPrmtopFile.test_HAngle) Test that HAngle constraints are properly handled for all hydrogens ... ok test_HydrogenMass (TestAmberPrmtopFile.TestAmberPrmtopFile.test_HydrogenMass) Test that altering the mass of hydrogens works correctly. ... ok test_ImplicitSolvent (TestAmberPrmtopFile.TestAmberPrmtopFile.test_ImplicitSolvent) Test the four types of implicit solvents using the implicitSolvent ... /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/amber_file_parser.py:1168: UserWarning: Non-optimal GB parameters detected for GB model HCT warnings.warn( ok test_ImplicitSolventForces (TestAmberPrmtopFile.TestAmberPrmtopFile.test_ImplicitSolventForces) Compute forces for different implicit solvent types, and compare them to ones generated with a previous version of OpenMM to ensure they haven't changed. ... ok test_ImplicitSolventParameters (TestAmberPrmtopFile.TestAmberPrmtopFile.test_ImplicitSolventParameters) Test that parameters are set correctly for the different types of implicit solvent. ... ok test_ImplicitSolventZeroSA (TestAmberPrmtopFile.TestAmberPrmtopFile.test_ImplicitSolventZeroSA) Test that requesting gbsaModel=None yields a surface area energy of 0 when ... ok test_LJ1264 (TestAmberPrmtopFile.TestAmberPrmtopFile.test_LJ1264) Test prmtop with 12-6-4 vdW potential implemented ... ok test_NBFIX_LongRange (TestAmberPrmtopFile.TestAmberPrmtopFile.test_NBFIX_LongRange) Test prmtop files with NBFIX LJ modifications w/ long-range correction ... ok test_NBFIX_noLongRange (TestAmberPrmtopFile.TestAmberPrmtopFile.test_NBFIX_noLongRange) Test prmtop files with NBFIX LJ modifications w/out long-range correction ... ok test_NonbondedMethod (TestAmberPrmtopFile.TestAmberPrmtopFile.test_NonbondedMethod) Test all six options for the nonbondedMethod parameter. ... ok test_RemoveCMMotion (TestAmberPrmtopFile.TestAmberPrmtopFile.test_RemoveCMMotion) Test both options (True and False) for the removeCMMotion parameter. ... ok test_RigidWaterAndConstraints (TestAmberPrmtopFile.TestAmberPrmtopFile.test_RigidWaterAndConstraints) Test all eight options for the constraints and rigidWater parameters. ... ok test_triclinicParm (TestAmberPrmtopFile.TestAmberPrmtopFile.test_triclinicParm) Check that triclinic unit cells work correctly ... ok test_with_dcd_reporter (TestAmberPrmtopFile.TestAmberPrmtopFile.test_with_dcd_reporter) Check that an amber simulation like the docs example works with a DCD reporter. ... ok test_createCheckpoint (TestBytes.TestBytes.test_createCheckpoint) ... ok testSystemOptions (TestCharmmFiles.TestCharmmFiles.testSystemOptions) Test various options in CharmmPsfFile.createSystem ... ok test_Constraints (TestCharmmFiles.TestCharmmFiles.test_Constraints) Test that bond and angles constraints are correctly added into the system ... ok test_Constraints_charmm (TestCharmmFiles.TestCharmmFiles.test_Constraints_charmm) Tests that CHARMM and OpenMM implementation of CHARMM force field produce the same constraints and energy ... ok test_Cutoff (TestCharmmFiles.TestCharmmFiles.test_Cutoff) Test to make sure the nonbondedCutoff parameter is passed correctly. ... ok test_Drude (TestCharmmFiles.TestCharmmFiles.test_Drude) Test CHARMM systems with Drude force field ... skipped 'Skipping test failing due to missing platforms' test_DrudeMass (TestCharmmFiles.TestCharmmFiles.test_DrudeMass) Test that setting the mass of Drude particles works correctly. ... ok test_HydrogenMass (TestCharmmFiles.TestCharmmFiles.test_HydrogenMass) Test that altering the mass of hydrogens works correctly. ... ok test_ImplicitSolvent (TestCharmmFiles.TestCharmmFiles.test_ImplicitSolvent) Test implicit solvent using the implicitSolvent parameter. ... ok test_ImplicitSolventForces (TestCharmmFiles.TestCharmmFiles.test_ImplicitSolventForces) Compute forces for different implicit solvent types, and compare them to ones generated with a previous version of OpenMM to ensure they haven't changed. ... ok test_ImplicitSolventParameters (TestCharmmFiles.TestCharmmFiles.test_ImplicitSolventParameters) Test that solventDielectric and soluteDielectric are passed correctly. ... ok test_Impropers (TestCharmmFiles.TestCharmmFiles.test_Impropers) Test CHARMM improper torsions. ... ok test_InsCode (TestCharmmFiles.TestCharmmFiles.test_InsCode) Test the parsing of PSF files that contain insertion codes in their residue numbers ... ok test_Lonepair (TestCharmmFiles.TestCharmmFiles.test_Lonepair) Test the lonepair facilities, in particular the colinear type of lonepairs ... ok test_NBFIX (TestCharmmFiles.TestCharmmFiles.test_NBFIX) Tests CHARMM systems with NBFIX Lennard-Jones modifications ... ok test_NBFIX14 (TestCharmmFiles.TestCharmmFiles.test_NBFIX14) Tests CHARMM systems with NBFIX modifications to 1-4 interactions ... ok test_NBThole (TestCharmmFiles.TestCharmmFiles.test_NBThole) Tests CHARMM system with NBTHole ... skipped 'Skipping test failing due to missing platforms' test_NBXMod (TestCharmmFiles.TestCharmmFiles.test_NBXMod) Test that all values of NBXMod are interpreted correctly. ... ok test_NoLongRangeCorrection (TestCharmmFiles.TestCharmmFiles.test_NoLongRangeCorrection) Test that long range correction is disabled. ... ok test_NoPsfWarning (TestCharmmFiles.TestCharmmFiles.test_NoPsfWarning) Test that PSF warning is not thrown. ... ok test_NonbondedMethod (TestCharmmFiles.TestCharmmFiles.test_NonbondedMethod) Test both non-periodic methods for the systems ... ok test_Nonbonded_Exclusion (TestCharmmFiles.TestCharmmFiles.test_Nonbonded_Exclusion) Test that the 1-2, 1-3 and 1-4 pairs are correctly excluded or scaled. ... ok test_PSFSetUnitCellDimensions (TestCharmmFiles.TestCharmmFiles.test_PSFSetUnitCellDimensions) Test that setting the box via unit cell dimensions works correctly. ... ok test_PermissiveRead (TestCharmmFiles.TestCharmmFiles.test_PermissiveRead) Compare permissive and strict reading of Charmm parameters ... ok test_RemoveCMMotion (TestCharmmFiles.TestCharmmFiles.test_RemoveCMMotion) Test both options (True and False) for the removeCMMotion parameter. ... ok test_Residues (TestCharmmFiles.TestCharmmFiles.test_Residues) Test that residues are read correctly, even if they have the same RESID while being in separate segments. ... ok test_1 (TestCheckpointReporter.TestCheckpointReporter.test_1) Test CheckpointReporter. ... ok testAppend (TestDcdFile.TestDCDFile.testAppend) Test appending to an existing trajectory. ... ok testLongTrajectory (TestDcdFile.TestDCDFile.testLongTrajectory) Test writing a trajectory that has more than 2^31 steps. ... ok test_dcd (TestDcdFile.TestDCDFile.test_dcd) Test the DCD file ... ok test_Cutoff (TestDesmondDMSFile.TestDesmondDMSFile.test_Cutoff) Test to make sure the nonbondedCutoff parameter is passed correctly. ... ok test_EwaldErrorTolerance (TestDesmondDMSFile.TestDesmondDMSFile.test_EwaldErrorTolerance) Test to make sure the ewaldErrorTolerance parameter is passed correctly. ... ok test_HydrogenMass (TestDesmondDMSFile.TestDesmondDMSFile.test_HydrogenMass) Test that altering the mass of hydrogens works correctly. ... ok test_NonbondedMethod (TestDesmondDMSFile.TestDesmondDMSFile.test_NonbondedMethod) Test all six options for the nonbondedMethod parameter. ... ok test_OPLS1 (TestDesmondDMSFile.TestDesmondDMSFile.test_OPLS1) Test OPLS potential energy of nabumetone ... ok test_OPLS2 (TestDesmondDMSFile.TestDesmondDMSFile.test_OPLS2) Test OPLS potential energy of beta-cyclodextrin/nabumetone complex ... ok test_RemoveCMMotion (TestDesmondDMSFile.TestDesmondDMSFile.test_RemoveCMMotion) Test both options (True and False) for the removeCMMotion parameter. ... ok test_attributes (TestElement.TestElement.test_attributes) ... ok test_getByMass (TestElement.TestElement.test_getByMass) Tests the getByMass method ... ok test_immutable (TestElement.TestElement.test_immutable) ... ok test_pickleable (TestElement.TestElement.test_pickleable) ... ok test_Amoeba18BPTI (TestForceField.AmoebaTestForceField.test_Amoeba18BPTI) Test that AMOEBA18 computes energies correctly for BPTI. ... skipped 'Skipping test failing due to missing platforms' test_Amoeba18Nucleic (TestForceField.AmoebaTestForceField.test_Amoeba18Nucleic) Test that AMOEBA18 computes energies correctly for DNA and RNA. ... skipped 'Skipping test failing due to missing platforms' test_Cutoff (TestForceField.AmoebaTestForceField.test_Cutoff) Test to make sure the nonbondedCutoff parameter is passed correctly. ... ok test_DispersionCorrection (TestForceField.AmoebaTestForceField.test_DispersionCorrection) Test to make sure the nonbondedCutoff parameter is passed correctly. ... ok test_Forces (TestForceField.AmoebaTestForceField.test_Forces) Compute forces and compare them to ones generated with a previous version of OpenMM to ensure they haven't changed. ... skipped 'Skipping test failing due to missing platforms' test_NonbondedMethod (TestForceField.AmoebaTestForceField.test_NonbondedMethod) Test both options for the nonbondedMethod parameter. ... ok test_RigidWater (TestForceField.AmoebaTestForceField.test_RigidWater) Test that AMOEBA creates rigid water with the correct geometry. ... ok test_CharmmPolar (TestForceField.TestForceField.test_CharmmPolar) Test the CHARMM polarizable force field. ... skipped 'Skipping test failing due to missing platforms' test_CustomNonbondedGenerator (TestForceField.TestForceField.test_CustomNonbondedGenerator) Test the CustomNonbondedForce generator ... ok test_Cutoff (TestForceField.TestForceField.test_Cutoff) Test to make sure the nonbondedCutoff parameter is passed correctly. ... ok test_DispersionCorrection (TestForceField.TestForceField.test_DispersionCorrection) Test to make sure that the dispersion/long-range correction is set properly. ... ok test_Disulfides (TestForceField.TestForceField.test_Disulfides) Test that various force fields handle disulfides correctly. ... ok test_DrudeMass (TestForceField.TestForceField.test_DrudeMass) Test that setting the mass of Drude particles works correctly. ... ok test_Forces (TestForceField.TestForceField.test_Forces) Compute forces and compare them to ones generated with a previous version of OpenMM to ensure they haven't changed. ... ok test_Glycam (TestForceField.TestForceField.test_Glycam) Test computing energy with GLYCAM. ... ok test_HydrogenMass (TestForceField.TestForceField.test_HydrogenMass) Test that altering the mass of hydrogens works correctly. ... ok test_IdenticalTemplates (TestForceField.TestForceField.test_IdenticalTemplates) Test a case where patches produce two identical templates. ... ok test_IgnoreExternalBonds (TestForceField.TestForceField.test_IgnoreExternalBonds) Test the ignoreExternalBonds option ... ok test_ImplicitSolvent (TestForceField.TestForceField.test_ImplicitSolvent) Test the four types of implicit solvents using the implicitSolvent ... ok test_ImplicitSolventForces (TestForceField.TestForceField.test_ImplicitSolventForces) Compute forces for different implicit solvent types, and compare them to ones generated with AmberPrmtopFile. ... ok test_ImplicitSolventParameters (TestForceField.TestForceField.test_ImplicitSolventParameters) Test that solventDielectric and soluteDielectric are passed correctly ... ok test_ImpropersOrdering (TestForceField.TestForceField.test_ImpropersOrdering) Test correctness of the ordering of atom indexes in improper torsions ... ok test_ImpropersOrdering_smirnoff (TestForceField.TestForceField.test_ImpropersOrdering_smirnoff) Test correctness of the ordering of atom indexes in improper torsions ... ok test_Includes (TestForceField.TestForceField.test_Includes) Test using a ForceField that includes other files. ... ok test_InitializationScript (TestForceField.TestForceField.test_InitializationScript) Test that tags get executed. ... ok test_LennardJonesGenerator (TestForceField.TestForceField.test_LennardJonesGenerator) Test the LennardJones generator ... ok test_MultipleFilesandForceTags (TestForceField.TestForceField.test_MultipleFilesandForceTags) Test that the order of listing of multiple ffxmls does not matter. ... ok test_NBFix (TestForceField.TestForceField.test_NBFix) Test using LennardJonesGenerator to implement NBFix terms. ... ok test_NonbondedMethod (TestForceField.TestForceField.test_NonbondedMethod) Test all six options for the nonbondedMethod parameter. ... ok test_Opc3Energy (TestForceField.TestForceField.test_Opc3Energy) ... ok test_OpcEnergy (TestForceField.TestForceField.test_OpcEnergy) ... ok test_PeriodicBoxVectors (TestForceField.TestForceField.test_PeriodicBoxVectors) Test setting the periodic box vectors. ... ok test_ProgrammaticForceField (TestForceField.TestForceField.test_ProgrammaticForceField) Test building a ForceField programmatically. ... ok test_RemoveCMMotion (TestForceField.TestForceField.test_RemoveCMMotion) Test both options (True and False) for the removeCMMotion parameter. ... ok test_ResidueAttributes (TestForceField.TestForceField.test_ResidueAttributes) Test a ForceField that gets per-particle parameters from residue attributes. ... ok test_ResidueOverriding (TestForceField.TestForceField.test_ResidueOverriding) Test residue overriding via override tag in the XML ... ok test_ResidueTemplateUserChoice (TestForceField.TestForceField.test_ResidueTemplateUserChoice) Test createSystem does not allow multiple matching templates, unless ... ok test_RigidWaterAndConstraints (TestForceField.TestForceField.test_RigidWaterAndConstraints) Test all eight options for the constraints and rigidWater parameters. ... ok test_ScalingFactorCombining (TestForceField.TestForceField.test_ScalingFactorCombining) Tests that FFs can be combined if their scaling factors are very close ... ok test_SwitchingDistance (TestForceField.TestForceField.test_SwitchingDistance) Test that the switchDistance parameter is processed correctly. ... ok test_UnusedArgs (TestForceField.TestForceField.test_UnusedArgs) Test that specifying an argument that is never used throws an exception. ... ok test_Wildcard (TestForceField.TestForceField.test_Wildcard) Test that PeriodicTorsionForces using wildcard ('') for atom types / classes in the ffxml are correctly registered ... ok test_flexibleConstraints (TestForceField.TestForceField.test_flexibleConstraints) Test the flexibleConstraints keyword ... ok test_generateTemplatesForUnmatchedResidues (TestForceField.TestForceField.test_generateTemplatesForUnmatchedResidues) Test generation of blank forcefield residue templates for unmatched residues. ... ok test_getMatchingTemplates (TestForceField.TestForceField.test_getMatchingTemplates) Test retrieval of list of templates that match residues in a topology. ... ok test_getUnmatchedResidues (TestForceField.TestForceField.test_getUnmatchedResidues) Test retrieval of list of residues for which no templates are available. ... ok test_residueMatcher (TestForceField.TestForceField.test_residueMatcher) Test using a custom template matcher to select templates. ... ok test_residueTemplateGenerator (TestForceField.TestForceField.test_residueTemplateGenerator) Test the ability to add residue template generators to parameterize unmatched residues. ... ok test1 (TestForceGroups.TestForceGroups.test1) ... ok test2 (TestForceGroups.TestForceGroups.test2) ... ok test3 (TestForceGroups.TestForceGroups.test3) ... ok test_CustomHbondGenerator (TestGenerators.TestGenerators.test_CustomHbondGenerator) Test the generator for CustomHbondForce. ... ok test_CustomHbondGenerator2 (TestGenerators.TestGenerators.test_CustomHbondGenerator2) Test the generator for CustomHbondForce with different parameters. ... ok test_Triclinic (TestGromacsGroFile.TestGromacsGroFile.test_Triclinic) Test parsing a file that describes a triclinic box. ... ok test_Cutoff (TestGromacsTopFile.TestGromacsTopFile.test_Cutoff) Test to make sure the nonbondedCutoff parameter is passed correctly. ... skipped 'GROMACS is not installed' test_EwaldErrorTolerance (TestGromacsTopFile.TestGromacsTopFile.test_EwaldErrorTolerance) Test to make sure the ewaldErrorTolerance parameter is passed correctly. ... skipped 'GROMACS is not installed' test_GROMOS (TestGromacsTopFile.TestGromacsTopFile.test_GROMOS) Test a system using the GROMOS 54a7 force field. ... skipped 'GROMACS is not installed' test_HydrogenMass (TestGromacsTopFile.TestGromacsTopFile.test_HydrogenMass) Test that altering the mass of hydrogens works correctly. ... skipped 'GROMACS is not installed' test_NonbondedMethod (TestGromacsTopFile.TestGromacsTopFile.test_NonbondedMethod) Test all six options for the nonbondedMethod parameter. ... skipped 'GROMACS is not installed' test_RemoveCMMotion (TestGromacsTopFile.TestGromacsTopFile.test_RemoveCMMotion) Test both options (True and False) for the removeCMMotion parameter. ... skipped 'GROMACS is not installed' test_RigidWaterAndConstraints (TestGromacsTopFile.TestGromacsTopFile.test_RigidWaterAndConstraints) Test all eight options for the constraints and rigidWater parameters. ... skipped 'GROMACS is not installed' test_SMOG (TestGromacsTopFile.TestGromacsTopFile.test_SMOG) Test to ensure that SMOG models can be run without problems ... skipped 'GROMACS is not installed' test_SwitchingFunction (TestGromacsTopFile.TestGromacsTopFile.test_SwitchingFunction) Test using a switching function. ... skipped 'GROMACS is not installed' test_VirtualParticle (TestGromacsTopFile.TestGromacsTopFile.test_VirtualParticle) Test virtual particle works correctly. ... skipped 'GROMACS is not installed' test_Vsite3 (TestGromacsTopFile.TestGromacsTopFile.test_Vsite3) Test a three particle virtual site. ... skipped 'GROMACS is not installed' test_ff99SBILDN (TestGromacsTopFile.TestGromacsTopFile.test_ff99SBILDN) Test Gromacs topology #define replacement as used in ff99SB-ILDN ... skipped 'GROMACS is not installed' test_ionic (TestGromacsTopFile.TestGromacsTopFile.test_ionic) Test simulating an ionic liquid ... skipped 'GROMACS is not installed' testBadGroups (TestIntegrators.TestIntegrators.testBadGroups) Test the MTS integrator with bad force group substeps. ... ok testDrudeNoseHooverIntegrator (TestIntegrators.TestIntegrators.testDrudeNoseHooverIntegrator) Test the DrudeNoseHooverIntegrator ... skipped 'Skipping test failing due to missing platforms' testMTSIntegratorConstraints (TestIntegrators.TestIntegrators.testMTSIntegratorConstraints) Test the MTS integrator energy conservation on a system of constrained particles with no inner force (just constraints) ... ok testMTSIntegratorExplicit (TestIntegrators.TestIntegrators.testMTSIntegratorExplicit) Test the MTS integrator on an explicit solvent system ... ok testMTSLangevinIntegrator (TestIntegrators.TestIntegrators.testMTSLangevinIntegrator) Test the MTSLangevinIntegrator on an explicit solvent system ... ok testMTSLangevinIntegratorFriction (TestIntegrators.TestIntegrators.testMTSLangevinIntegratorFriction) Test the MTSLangevinIntegrator on a force-free particle to ensure friction is properly accounted for (issue #3790) ... ok testNoseHooverIntegrator (TestIntegrators.TestIntegrators.testNoseHooverIntegrator) Test partial thermostating in the NoseHooverIntegrator (only API) ... ok testHarmonicOscillator (TestMetadynamics.TestMetadynamics.testHarmonicOscillator) Test running metadynamics on a harmonic oscillator. ... ok test_add (TestModeller.TestModeller.test_add) Test the add() method. ... ok test_addExtraParticles (TestModeller.TestModeller.test_addExtraParticles) Test addExtraParticles(). ... ok test_addHydrogensASH (TestModeller.TestModeller.test_addHydrogensASH) Test of addHydrogens() in which we force ASH to be a variant using the variants parameter. ... ok test_addHydrogensCYX (TestModeller.TestModeller.test_addHydrogensCYX) Test of addHydrogens() in which we force CYX to be a variant using the variants parameter. ... ok test_addHydrogensGLH (TestModeller.TestModeller.test_addHydrogensGLH) Test of addHydrogens() in which we force GLH to be a variant using the variants parameter. ... ok test_addHydrogensGlycam (TestModeller.TestModeller.test_addHydrogensGlycam) Test adding hydrogens for GLYCAM. ... ok test_addHydrogensLYN (TestModeller.TestModeller.test_addHydrogensLYN) Test of addHydrogens() in which we force LYN to be a variant using the variants parameter. ... ok test_addHydrogensPdb2 (TestModeller.TestModeller.test_addHydrogensPdb2) Test the addHydrogens() method on the T4-lysozyme-L99A pdb file. ... ok test_addHydrogensPdb3 (TestModeller.TestModeller.test_addHydrogensPdb3) Test the addHydrogens() method on the metallothionein pdb file. ... ok test_addHydrogensPdb3_keepPositions (TestModeller.TestModeller.test_addHydrogensPdb3_keepPositions) Test addHydrogens() does not change existing Hs positions ... ok test_addHydrogenspH11 (TestModeller.TestModeller.test_addHydrogenspH11) Test of addHydrogens() with pH=11. ... ok test_addHydrogenspH4 (TestModeller.TestModeller.test_addHydrogenspH4) Test of addHydrogens() with pH=4. ... ok test_addHydrogenspH9 (TestModeller.TestModeller.test_addHydrogenspH9) Test of addHydrogens() with pH=9. ... ok test_addMembrane (TestModeller.TestModeller.test_addMembrane) Test adding a membrane to a realistic system. ... skipped 'Skipping a test which takes too long' test_addSolventBoxShape (TestModeller.TestModeller.test_addSolventBoxShape) Test the addSolvent() method; test the different box shapes. ... ok test_addSolventIons (TestModeller.TestModeller.test_addSolventIons) Test the addSolvent() method with all possible choices for positive and negative ions. ... ok test_addSolventNegativeSolvent (TestModeller.TestModeller.test_addSolventNegativeSolvent) Test the addSolvent() method; test adding ions to a negatively charged solvent. ... ok test_addSolventNeutralSolvent (TestModeller.TestModeller.test_addSolventNeutralSolvent) Test the addSolvent() method; test adding ions to neutral solvent. ... ok test_addSolventPeriodicBox (TestModeller.TestModeller.test_addSolventPeriodicBox) Test the addSolvent() method; test that the five ways of passing in the periodic box all work. ... ok test_addSolventPositiveSolvent (TestModeller.TestModeller.test_addSolventPositiveSolvent) Test the addSolvent() method; test adding ions to a positively charged solvent. ... ok test_addSolventWaterModels (TestModeller.TestModeller.test_addSolventWaterModels) Test all addSolvent() method with all possible water models. ... ok test_addVirtualSites (TestModeller.TestModeller.test_addVirtualSites) Test adding extra particles defined by virtual sites. ... ok test_convertWater (TestModeller.TestModeller.test_convertWater) Test the convertWater() method. ... ok test_delete (TestModeller.TestModeller.test_delete) Test the delete() method. ... ok test_deleteWater (TestModeller.TestModeller.test_deleteWater) Test the deleteWater() method. ... ok test_multiSiteIon (TestModeller.TestModeller.test_multiSiteIon) Test adding extra particles whose positions are determined based on bonds. ... ok test_removeExtraHydrogens (TestModeller.TestModeller.test_removeExtraHydrogens) Test that addHydrogens() can remove hydrogens that shouldn't be there. ... ok test_CMAP (TestNumpyCompatibility.TestNumpyCompatibility.test_CMAP) ... ok test_int64 (TestNumpyCompatibility.TestNumpyCompatibility.test_int64) ... ok test_periodicBoxVectors (TestNumpyCompatibility.TestNumpyCompatibility.test_periodicBoxVectors) ... ok test_setPositions (TestNumpyCompatibility.TestNumpyCompatibility.test_setPositions) ... ok test_setPositions_units (TestNumpyCompatibility.TestNumpyCompatibility.test_setPositions_units) ... ok test_setVelocities (TestNumpyCompatibility.TestNumpyCompatibility.test_setVelocities) ... ok test_setVelocities_units (TestNumpyCompatibility.TestNumpyCompatibility.test_setVelocities_units) ... ok test_tabulatedFunction (TestNumpyCompatibility.TestNumpyCompatibility.test_tabulatedFunction) ... ok testNumpyAttributes (TestNumpyCompatibility.TestNumpyUnits.testNumpyAttributes) ... ok testAlaAlaAla (TestPatches.TestPatches.testAlaAlaAla) Test constructing a System that involves two patches. ... ok testApplyPatch (TestPatches.TestPatches.testApplyPatch) Test applying a patch to a template. ... ok testDisulfidePatch (TestPatches.TestPatches.testDisulfidePatch) ... ok testParseMultiresiduePatch (TestPatches.TestPatches.testParseMultiresiduePatch) Test parsing a tag that affects two residues. ... ok testParsePatch (TestPatches.TestPatches.testParsePatch) Test parsing a tag. ... ok test_AltLocs (TestPdbFile.TestPdbFile.test_AltLocs) Test reading a file that includes AltLocs ... ok test_BinaryStream (TestPdbFile.TestPdbFile.test_BinaryStream) Test reading a stream that was opened in binary mode. ... ok test_ExtraParticles (TestPdbFile.TestPdbFile.test_ExtraParticles) Test reading, and writing and re-reading of a file containing extra particle atoms. ... ok test_LargeFile (TestPdbFile.TestPdbFile.test_LargeFile) Write and read a file with more than 100,000 atoms ... ok test_Triclinic (TestPdbFile.TestPdbFile.test_Triclinic) Test parsing a file that describes a triclinic box. ... ok test_WriteFile (TestPdbFile.TestPdbFile.test_WriteFile) Write a file, read it back, and make sure it matches the original. ... ok testBondSubset (TestPdbReporter.TestPDBReporter.testBondSubset) Test that CONECT records are output correctly when using atomSubset ... ok testInvalidSubsets (TestPdbReporter.TestPDBReporter.testInvalidSubsets) Test that an exception is raised when the indices in atomSubset are invalid ... ok testSubset (TestPdbReporter.TestPDBReporter.testSubset) Test writing out a subset of atoms ... ok testWriteAll (TestPdbReporter.TestPDBReporter.testWriteAll) Test all atoms are written when atomSubset is not specified ... ok testBondSubset (TestPdbReporter.TestPDBxReporter.testBondSubset) Test that struct_conn records are output correctly when using atomSubset ... ok testInvalidSubsets (TestPdbReporter.TestPDBxReporter.testInvalidSubsets) Test that an exception is raised when the indices in atomSubset are invalid ... ok testSubset (TestPdbReporter.TestPDBxReporter.testSubset) Test writing out a subset of atoms ... ok testWriteAll (TestPdbReporter.TestPDBxReporter.testWriteAll) Test all atoms are written when atomSubset is not specified ... ok testBonds (TestPdbxFile.TestPdbxFile.testBonds) Test reading and writing a file that includes bonds. ... ok testInsertionCodes (TestPdbxFile.TestPdbxFile.testInsertionCodes) Test reading a file that uses insertion codes. ... ok testMultiChain (TestPdbxFile.TestPdbxFile.testMultiChain) Test reading and writing a file that includes multiple chains ... ok testReporterExplicit (TestPdbxFile.TestPdbxFile.testReporterExplicit) Tests the PDBxReporter with PBC ... ok testReporterImplicit (TestPdbxFile.TestPdbxFile.testReporterImplicit) Tests the PDBxReporter without PBC ... ok test_FormatConversion (TestPdbxFile.TestPdbxFile.test_FormatConversion) Test conversion from PDB to PDBx ... ok test_Triclinic (TestPdbxFile.TestPdbxFile.test_Triclinic) Test parsing a file that describes a triclinic box. ... ok testCopyForce (TestPickle.TestPickle.testCopyForce) Test copying a Python object whose class extends Force. ... ok testCopyIntegrator (TestPickle.TestPickle.testCopyIntegrator) Test copying a Python object whose class extends Integrator. ... ok test_deepcopy (TestPickle.TestPickle.test_deepcopy) Test that serialization/deserialization works (via deepcopy). ... ok testHarmonicOscillator (TestSimulatedTempering.TestSimulatedTempering.testHarmonicOscillator) Test running simulated tempering on a harmonic oscillator. ... ok testHarmonicOscillatorNPT (TestSimulatedTempering.TestSimulatedTempering.testHarmonicOscillatorNPT) Test running simulated tempering on a harmonic oscillator with a Monte Carlo barostat. ... ok testCheckpointing (TestSimulation.TestSimulation.testCheckpointing) Test that checkpointing works correctly. ... ok testLoadFromXML (TestSimulation.TestSimulation.testLoadFromXML) Test creating a Simulation from XML files ... ok testMinimizationReporter (TestSimulation.TestSimulation.testMinimizationReporter) Test invoking a reporter during minimization. ... ok testRunForClockTime (TestSimulation.TestSimulation.testRunForClockTime) Test the runForClockTime() method. ... ok testSaveState (TestSimulation.TestSimulation.testSaveState) Test that saving States works correctly. ... ok testStep (TestSimulation.TestSimulation.testStep) Test the step() method. ... ok testWrappedCoordinates (TestSimulation.TestSimulation.testWrappedCoordinates) Test generating reports with and without wrapped coordinates. ... ok testAppend (TestStateDataReporter.TestStateDataReporter.testAppend) Test appending to the StateDataReporter output. ... /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/tests/TestStateDataReporter.py:33: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmpdp2ytwps/templog.txt' mode='r' encoding='utf-8'> lines = open(filename).read().split('\n') ResourceWarning: Enable tracemalloc to get the object allocation traceback ok test_1 (TestSwigWrappers.TestSwigWrappers.test_1) ... ok test_bondtype_singleton (TestTopology.TestTopology.test_bondtype_singleton) Tests that the bond types are really singletons ... ok test_getters (TestTopology.TestTopology.test_getters) Test getters for number of atoms, residues, chains. ... ok test_residue_bonds (TestTopology.TestTopology.test_residue_bonds) Test retrieving bonds for a residue produces expected results. ... ok testComputePBCVectors (TestUnitCell.TestUnitCell.testComputePBCVectors) Tests computing periodic box vectors ... ok testReducePBCVectors (TestUnitCell.TestUnitCell.testReducePBCVectors) Checks that reducePeriodicBoxVectors properly reduces vectors ... ok testMultiplication (TestUnits.TestNumpyUnits.testMultiplication) Tests that units override numpy.ndarray multiplication ... ok testNumpyDeepCopy (TestUnits.TestNumpyUnits.testNumpyDeepCopy) Check that deepcopy on numpy array does not strip units ... ok testNumpyDivision (TestUnits.TestNumpyUnits.testNumpyDivision) Tests that division of numpy Quantities works correctly ... ok testNumpyFunctions (TestUnits.TestNumpyUnits.testNumpyFunctions) Tests various numpy attributes that they result in Quantities ... ok testNumpyIsString (TestUnits.TestNumpyUnits.testNumpyIsString) Tests the internal _is_string method with numpy Quantities ... ok testNumpyQuantity (TestUnits.TestNumpyUnits.testNumpyQuantity) Tests that numpy arrays can form Quantity values ... ok testAngleQuantities (TestUnits.TestUnits.testAngleQuantities) Tests angle measurements ... ok testBadQuantityComparisons (TestUnits.TestUnits.testBadQuantityComparisons) Checks that comparisons of incompatible units fails ... ok testBadQuantityConversions (TestUnits.TestUnits.testBadQuantityConversions) Tests that conversions to incompatible units fails ... ok testBadQuantityMaths (TestUnits.TestUnits.testBadQuantityMaths) Tests that Maths of incompatible units properly fails ... ok testBaseScaleMix (TestUnits.TestUnits.testBaseScaleMix) Test mixing of BaseUnit and ScaledUnit instances ... ok testBaseUnit (TestUnits.TestUnits.testBaseUnit) Tests the creation of a base unit furlong ... ok testCalorieConversion (TestUnits.TestUnits.testCalorieConversion) Tests unit conversion with calories to joules ... ok testChemistryProblems (TestUnits.TestUnits.testChemistryProblems) Tests some gen-chem applications with Quantity's ... ok testCollectionQuantities (TestUnits.TestUnits.testCollectionQuantities) Tests the use of collections as Quantity values ... ok testCollectionQuantityOperations (TestUnits.TestUnits.testCollectionQuantityOperations) Tests that Quantity collections behave correctly ... ok testComparisonOperators (TestUnits.TestUnits.testComparisonOperators) Tests unit comparison operators ... ok testCompositeUnits (TestUnits.TestUnits.testCompositeUnits) Tests the creation of a composite unit ... ok testConversionFactorTo (TestUnits.TestUnits.testConversionFactorTo) Tests the "conversion_factor_to" attribute of Units ... ok testCreateNewBaseUnit (TestUnits.TestUnits.testCreateNewBaseUnit) Tests creating a new base unit ... ok testCreateNewScaledUnit (TestUnits.TestUnits.testCreateNewScaledUnit) Tests creating a new ScaledUnit ... ok testCreateNewUnit (TestUnits.TestUnits.testCreateNewUnit) Tests creating a new Unit ... ok testDimensionless (TestUnits.TestUnits.testDimensionless) Tests the properties of unit.dimensionless ... ok testGetUnitAttributes (TestUnits.TestUnits.testGetUnitAttributes) Tests the unit attribute `getters' ... ok testIllegalQuantityOps (TestUnits.TestUnits.testIllegalQuantityOps) Test that illegal operations on Quantity objects fails ... ok testIsCompatible (TestUnits.TestUnits.testIsCompatible) Tests the is_compatible attribute of units ... ok testIsQuantity (TestUnits.TestUnits.testIsQuantity) Tests if is_quantity can detect Quantities vs. scalars and units ... ok testIsUnit (TestUnits.TestUnits.testIsUnit) Tests the unit.is_unit introspective function ... ok testMisc (TestUnits.TestUnits.testMisc) Miscellaneous tests for the unit package ... ok testMutableQuantityOperations (TestUnits.TestUnits.testMutableQuantityOperations) Tests that mutable Quantity objects do not get unexpectedly changed ... ok testPresetUnitSystems (TestUnits.TestUnits.testPresetUnitSystems) Tests some of the pre-set UnitSystem's ... ok testQuantityBadSqrt (TestUnits.TestUnits.testQuantityBadSqrt) Tests that taking sqrt of Quantities with incompatible units fails ... ok testQuantityCollectionMethods (TestUnits.TestUnits.testQuantityCollectionMethods) Tests some sequence methods on Quantity objects (no numpy) ... ok testQuantityComparisons (TestUnits.TestUnits.testQuantityComparisons) Tests binary comparison operators between Quantity ... ok testQuantityComplicatedMaths (TestUnits.TestUnits.testQuantityComplicatedMaths) Tests a complicated set of mathematical operations on a Quantity ... ok testQuantityFormat (TestUnits.TestUnits.testQuantityFormat) Tests the format method on Quantity instances ... ok testQuantityMaths (TestUnits.TestUnits.testQuantityMaths) Tests dimensional analysis & maths on and b/w Quantity objects ... ok testQuantitySqrt (TestUnits.TestUnits.testQuantitySqrt) Tests taking the square root of quantities ... ok testReduceUnit (TestUnits.TestUnits.testReduceUnit) Tests the reduce_unit functionality ... ok testScalarQuantityConstructor (TestUnits.TestUnits.testScalarQuantityConstructor) Tests creating a Quantity using the Quantity constructor ... ok testScalarQuantityMultiplyDivide (TestUnits.TestUnits.testScalarQuantityMultiplyDivide) Tests creating a scalar Quantity object by * or / by a Unit ... ok testScaledUnit (TestUnits.TestUnits.testScaledUnit) Tests ScaledUnit class with kilokelvins ... ok testString (TestUnits.TestUnits.testString) Tests unit handling with strings, which should be dimensionless ... ok testToBaseUnit (TestUnits.TestUnits.testToBaseUnit) Tests the "get_conversion_factor_to_base_units" method ... ok testTruthiness (TestUnits.TestUnits.testTruthiness) Tests the truthiness of units ... ok testUnaryOperators (TestUnits.TestUnits.testUnaryOperators) Tests unary operators on units ... ok testUnitBadSqrt (TestUnits.TestUnits.testUnitBadSqrt) Tests that illegal sqrt calls on incompatible units fails ... ok testUnitDivision (TestUnits.TestUnits.testUnitDivision) Tests the division of units and is_dimensionless ... ok testUnitMathModule (TestUnits.TestUnits.testUnitMathModule) Tests the unit_math functions on Quantity objects ... ok testUnitMathModuleBadInput (TestUnits.TestUnits.testUnitMathModuleBadInput) Tests that bad units to unit_math fails appropriately ... ok testUnitSqrt (TestUnits.TestUnits.testUnitSqrt) Tests taking the square root of units ... ok testUnitString (TestUnits.TestUnits.testUnitString) Test the Unit->str casting functionality ... ok testUnitSystem (TestUnits.TestUnits.testUnitSystem) Tests the creation of a UnitSystem and its behavior ... ok testValueInUnit (TestUnits.TestUnits.testValueInUnit) Tests the value_in_unit functionality for Quantity ... ok testNegation (TestVec3.TestVectors.testNegation) ... ok testVec3Addition (TestVec3.TestVectors.testVec3Addition) ... ok testVec3Attributes (TestVec3.TestVectors.testVec3Attributes) ... ok testVec3Division (TestVec3.TestVectors.testVec3Division) ... ok testVec3Equality (TestVec3.TestVectors.testVec3Equality) ... ok testVec3Multiplication (TestVec3.TestVectors.testVec3Multiplication) ... ok testVec3Subtraction (TestVec3.TestVectors.testVec3Subtraction) ... ok testAppend (TestXtcFile.TestXtcFile.testAppend) Test appending to an existing trajectory. ... ok testLongTrajectory (TestXtcFile.TestXtcFile.testLongTrajectory) Test writing a trajectory that has more than 2^31 steps. ... ok test_xtc_box_from_topology (TestXtcFile.TestXtcFile.test_xtc_box_from_topology) Test the XTC file by writing a trajectory and reading it back. Letting the box be set from the topology ... ok test_xtc_cubic (TestXtcFile.TestXtcFile.test_xtc_cubic) Test the XTC file by writing a trajectory and reading it back. Using a cubic box ... ok test_xtc_triclinic (TestXtcFile.TestXtcFile.test_xtc_triclinic) Test the XTC file by writing a trajectory and reading it back. Using a triclinic box ... ok ---------------------------------------------------------------------- Ran 327 tests in 2339.451s OK (skipped=21) #"Steps" "Temperature (K)" "200K Weight" "216.012K Weight" "233.306K Weight" "251.984K Weight" "272.158K Weight" "293.947K Weight" "317.48K Weight" "342.898K Weight" "370.35K Weight" "400K Weight" 10000 272.158 0 0.046875 -0.109375 0.0078125 -0.171875 -0.15625 -0.148438 -0.3125 -0.328125 -0.40625 20000 200 0 0.00402832 -0.0617065 -0.00976562 -0.19989 -0.151917 -0.131287 -0.330994 -0.26239 -0.339233 30000 216.012 0 0.00346231 -0.062273 -0.01052 -0.200107 -0.151997 -0.131946 -0.331259 -0.262751 -0.339631 40000 251.984 0 0.00345916 -0.0622743 -0.0105232 -0.200106 -0.151999 -0.131948 -0.331261 -0.262752 -0.339631 50000 200 0 0.00345919 -0.0622743 -0.0105232 -0.200106 -0.151999 -0.131948 -0.331261 -0.262752 -0.339631 60000 233.306 0 0.00345919 -0.0622743 -0.0105232 -0.200106 -0.151999 -0.131948 -0.331261 -0.262752 -0.339631 70000 370.35 0 0.00345919 -0.0622743 -0.0105232 -0.200106 -0.151999 -0.131948 -0.331261 -0.262752 -0.339631 80000 216.012 0 0.00345919 -0.0622743 -0.0105232 -0.200106 -0.151999 -0.131948 -0.331261 -0.262752 -0.339631 90000 216.012 0 0.00345919 -0.0622743 -0.0105232 -0.200106 -0.151999 -0.131948 -0.331261 -0.262752 -0.339631 100000 216.012 0 0.00345919 -0.0622743 -0.0105232 -0.200106 -0.151999 -0.131948 -0.331261 -0.262752 -0.339631 110000 293.947 0 0.00345919 -0.0622743 -0.0105232 -0.200106 -0.151999 -0.131948 -0.331261 -0.262752 -0.339631 #"Steps" "Temperature (K)" "200K Weight" "216.012K Weight" "233.306K Weight" "251.984K Weight" "272.158K Weight" "293.947K Weight" "317.48K Weight" "342.898K Weight" "370.35K Weight" "400K Weight" make[1]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg' create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=cmake dh_prep -O--buildsystem=cmake debian/rules override_dh_auto_install make[1]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg' dh_auto_install -O--buildsystem=cmake cd obj-x86_64-linux-gnu && make -j20 install DESTDIR=/build/reproducible-path/openmm-8.1.1\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/openmm-8.1.1+dfsg -B/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'preinstall'. make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "Release" -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/bin/TestReferenceHarmonicBondForce -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/bin/TestReferenceHarmonicBondForce" to "" -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLArray.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLBondedUtilities.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLCompact.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLContext.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLEvent.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLExpressionUtilities.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLFFT3D.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLForceInfo.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLIntegrationUtilities.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLKernel.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLKernelFactory.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLKernels.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLNonbondedUtilities.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLParallelKernels.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLParameterSet.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLPlatform.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLProgram.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLSort.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/opencl/opencl.hpp -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/plugins/libOpenMMOpenCL.so -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/plugins/libOpenMMOpenCL.so" to "" -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/common/ArrayInterface.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/common/BondedUtilities.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/common/CommonKernels.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/common/ComputeArray.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/common/ComputeContext.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/common/ComputeEvent.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/common/ComputeForceInfo.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/common/ComputeKernel.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/common/ComputeParameterInfo.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/common/ComputeParameterSet.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/common/ComputeProgram.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/common/ComputeVectorTypes.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/common/ContextSelector.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/common/ExpressionUtilities.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/common/IntegrationUtilities.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/common/NonbondedUtilities.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/common/windowsExportCommon.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/cpu/AlignedArray.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/cpu/CpuBondForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/cpu/CpuCustomGBForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/cpu/CpuCustomManyParticleForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/cpu/CpuCustomNonbondedForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/cpu/CpuCustomNonbondedForceFvec.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/cpu/CpuGBSAOBCForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/cpu/CpuGayBerneForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/cpu/CpuKernelFactory.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/cpu/CpuKernels.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/cpu/CpuLangevinDynamics.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/cpu/CpuLangevinMiddleDynamics.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/cpu/CpuNeighborList.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/cpu/CpuNonbondedForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/cpu/CpuNonbondedForceFvec.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/cpu/CpuPlatform.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/cpu/CpuRandom.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/cpu/CpuSETTLE.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/cpu/windowsExportCpu.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/plugins/libOpenMMCPU.so -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/plugins/libOpenMMCPU.so" to "" -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/plugins/libOpenMMAmoebaReference.so -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/plugins/libOpenMMAmoebaReference.so" to "" -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/plugins/libOpenMMAmoebaOpenCL.so -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/plugins/libOpenMMAmoebaOpenCL.so" to "" -- Up-to-date: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/plugins/libOpenMMAmoebaOpenCL.so -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/OpenMMAmoeba.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/AmoebaGeneralizedKirkwoodForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/AmoebaMultipoleForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/AmoebaTorsionTorsionForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/AmoebaVdwForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/AmoebaWcaDispersionForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/HippoNonbondedForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/amoebaKernels.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/AmoebaGeneralizedKirkwoodForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/AmoebaMultipoleForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/AmoebaTorsionTorsionForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/AmoebaVdwForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/AmoebaWcaDispersionForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/HippoNonbondedForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/windowsExportAmoeba.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/libOpenMMAmoeba.so -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/libOpenMMAmoeba.so" to "" -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/plugins/libOpenMMRPMDReference.so -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/plugins/libOpenMMRPMDReference.so" to "" -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/plugins/libOpenMMRPMDOpenCL.so -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/plugins/libOpenMMRPMDOpenCL.so" to "" -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/RPMDIntegrator.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/RPMDMonteCarloBarostat.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/RPMDUpdater.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/RpmdKernels.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/RPMDMonteCarloBarostatImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/windowsExportRpmd.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/libOpenMMRPMD.so -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/libOpenMMRPMD.so" to "" -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/plugins/libOpenMMDrudeReference.so -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/plugins/libOpenMMDrudeReference.so" to "" -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/plugins/libOpenMMDrudeOpenCL.so -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/plugins/libOpenMMDrudeOpenCL.so" to "" -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/OpenMMDrude.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/DrudeForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/DrudeIntegrator.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/DrudeKernels.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/DrudeLangevinIntegrator.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/DrudeNoseHooverIntegrator.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/DrudeSCFIntegrator.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/DrudeForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/windowsExportDrude.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/libOpenMMDrude.so -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/libOpenMMDrude.so" to "" -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/plugins/libOpenMMPME.so -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/plugins/libOpenMMPME.so" to "" -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/OpenMM.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/Kernel.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/KernelFactory.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/KernelImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/Platform.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/PluginInitializer.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/kernels.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/ATMForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/AndersenThermostat.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/BrownianIntegrator.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/CMAPTorsionForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/CMMotionRemover.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/CompoundIntegrator.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/Context.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/CustomAngleForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/CustomBondForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/CustomCVForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/CustomCentroidBondForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/CustomCompoundBondForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/CustomExternalForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/CustomGBForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/CustomHbondForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/CustomIntegrator.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/CustomManyParticleForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/CustomNonbondedForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/CustomTorsionForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/Force.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/GBSAOBCForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/GayBerneForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/HarmonicAngleForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/HarmonicBondForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/Integrator.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/LangevinIntegrator.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/LangevinMiddleIntegrator.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/LocalEnergyMinimizer.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/MonteCarloAnisotropicBarostat.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/MonteCarloBarostat.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/MonteCarloFlexibleBarostat.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/MonteCarloMembraneBarostat.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/NonbondedForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/NoseHooverChain.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/NoseHooverIntegrator.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/OpenMMException.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/PeriodicTorsionForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/RBTorsionForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/RMSDForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/State.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/System.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/TabulatedFunction.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/Units.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/VariableLangevinIntegrator.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/VariableVerletIntegrator.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/Vec3.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/VerletIntegrator.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/VirtualSite.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/ATMForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/AndersenThermostatImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/AssertionUtilities.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/CMAPTorsionForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/CMMotionRemoverImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/CompiledExpressionSet.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/ContextImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/CustomAngleForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/CustomBondForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/CustomCPPForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/CustomCVForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/CustomCentroidBondForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/CustomCompoundBondForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/CustomExternalForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/CustomGBForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/CustomHbondForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/CustomIntegratorUtilities.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/CustomManyParticleForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/CustomNonbondedForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/CustomTorsionForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/ForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/GBSAOBCForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/GayBerneForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/HarmonicAngleForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/HarmonicBondForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/MSVC_erfc.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/Messages.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/MonteCarloAnisotropicBarostatImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/MonteCarloBarostatImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/MonteCarloFlexibleBarostatImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/MonteCarloMembraneBarostatImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/NonbondedForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/OSRngSeed.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/PeriodicTorsionForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/RBTorsionForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/RMSDForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/SplineFitter.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/ThreadPool.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/VectorExpression.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/hardware.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/timer.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/vectorize.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/vectorizeAvx.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/vectorizeAvx2.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/vectorize_neon.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/vectorize_pnacl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/vectorize_ppc.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/vectorize_sse.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/windowsExport.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ObcParameters.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/RealVec.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceAndersenThermostat.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceAngleBondIxn.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceBondForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceBondIxn.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceBrownianDynamics.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceCCMAAlgorithm.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceCMAPTorsionIxn.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceConstraintAlgorithm.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceConstraints.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceCustomAngleIxn.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceCustomBondIxn.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceCustomCVForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceCustomCentroidBondIxn.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceCustomCompoundBondIxn.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceCustomDynamics.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceCustomExternalIxn.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceCustomGBIxn.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceCustomHbondIxn.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceCustomManyParticleIxn.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceCustomNonbondedIxn.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceCustomTorsionIxn.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceDynamics.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceGayBerneForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceHarmonicBondIxn.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceKernelFactory.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceKernels.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceLJCoulomb14.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceLJCoulombIxn.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceLangevinMiddleDynamics.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceLincsAlgorithm.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceMonteCarloBarostat.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceNeighborList.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceNoseHooverChain.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceNoseHooverDynamics.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceObc.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferencePME.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferencePairIxn.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferencePlatform.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferencePointFunctions.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceProperDihedralBond.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceRMSDForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceRbDihedralBond.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceSETTLEAlgorithm.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceStochasticDynamics.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceTabulatedFunction.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceVariableStochasticDynamics.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceVariableVerletDynamics.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceVerletDynamics.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceVirtualSites.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/SimTKOpenMMRealType.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/SimTKOpenMMUtilities.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/lepton/CompiledExpression.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/lepton/CompiledVectorExpression.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/lepton/CustomFunction.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/lepton/Exception.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/lepton/ExpressionProgram.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/lepton/ExpressionTreeNode.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/lepton/Operation.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/lepton/ParsedExpression.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/lepton/Parser.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/lepton/windowsIncludes.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/sfmt/SFMT.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/serialization/SerializationNode.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/serialization/SerializationProxy.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/serialization/XmlSerializer.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/swig/OpenMMSwigHeaders.i -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/swig/typemaps.i -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/licenses/GPL.txt -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/licenses/LGPL.txt -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/licenses/Licenses.txt -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/HelloArgon.cpp -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/HelloSodiumChloride.cpp -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/HelloEthane.cpp -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/HelloWaterBox.cpp -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/HelloArgonInC.c -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/HelloSodiumChlorideInC.c -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/HelloArgonInFortran.f90 -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/HelloSodiumChlorideInFortran.f90 -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/simulateAmber.py -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/simulatePdb.py -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/simulateGromacs.py -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/benchmark.py -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/argon-chemical-potential.py -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/input.inpcrd -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/input.prmtop -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/input.pdb -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/input.gro -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/input.top -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/5dfr_minimized.pdb -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/5dfr_solv-cube_equil.pdb -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/apoa1.pdb -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/VisualStudio/HelloArgon.vcproj -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/VisualStudio/HelloArgon.sln -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/VisualStudio/HelloArgonInC.sln -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/VisualStudio/HelloArgonInC.vcproj -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/VisualStudio/HelloArgonInFortran.sln -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/VisualStudio/HelloArgonInFortran.vfproj -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/README.txt -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/Makefile -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/NMakefile -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/MakefileNotes.txt -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/Empty.cpp -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/libOpenMM.so.8.1 -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/libOpenMM.so make[2]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' dh_install -plibopenmm8.1 debian/tmp/usr/lib/libOpenMM.so.* usr/lib/x86_64-linux-gnu dh_install -plibopenmm-dev debian/tmp/usr/lib/libOpenMMAmoeba.so usr/lib/x86_64-linux-gnu/openmm dh_install -plibopenmm-dev debian/tmp/usr/lib/libOpenMMDrude.so usr/lib/x86_64-linux-gnu/openmm dh_install -plibopenmm-dev debian/tmp/usr/lib/libOpenMMRPMD.so usr/lib/x86_64-linux-gnu/openmm dh_install -plibopenmm-dev debian/tmp/usr/lib/libOpenMM.so usr/lib/x86_64-linux-gnu dh_install -plibopenmm-plugins debian/tmp/usr/lib/plugins usr/lib/x86_64-linux-gnu/openmm pybuild --dir obj-x86_64-linux-gnu/python --install I: pybuild base:311: /usr/bin/python3.12 setup.py install --root /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp author Peter Eastman data_files [] description Python wrapper for OpenMM (a C++ MD package) download_url https://openmm.org ext_modules[, , ] license Python Software Foundation License (BSD-like) long_descriptionOpenMM is a toolkit for molecular simulation. It can be used either as a stand-alone application for running simulations, or as a library you call from your own code. It provides a combination of extreme flexibility (through custom forces and integrators), openness, and high performance (especially on recent GPUs) that make it truly unique among simulation codes. name OpenMM package_data{'openmm': [], 'openmm.app': ['data/*.xml', 'data/*.pdb', 'data/amber14/*.xml', 'data/charmm36/*.xml', 'data/implicit/*.xml'], 'openmm.app.internal': []} packages['simtk', 'simtk.unit', 'simtk.openmm', 'simtk.openmm.app', 'openmm', 'openmm.unit', 'openmm', 'openmm.app', 'openmm.app.internal', 'openmm.app.internal.charmm', 'openmm.app.internal.pdbx', 'openmm.app.internal.pdbx.reader', 'openmm.app.internal.pdbx.writer'] platforms ['Linux', 'Mac OS X', 'Windows'] url https://openmm.org version 8.1.1 running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running build running build_py copying openmm/version.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm running build_ext running install_lib creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12 creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/simtk copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/simtk/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/simtk creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/simtk/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/simtk/unit/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/simtk/unit creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/simtk/openmm copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/simtk/openmm/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/simtk/openmm creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/simtk/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/simtk/openmm/app/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/simtk/openmm/app creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/unit.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/constants.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/doctests.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/unit_operators.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/quantity.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/standard_dimensions.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/basedimension.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/__pycache__/standard_dimensions.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/__pycache__/baseunit.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/__pycache__/quantity.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/__pycache__/unit.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/__pycache__/unit_operators.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/__pycache__/basedimension.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/__pycache__/unit_math.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/__pycache__/mymatrix.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/__pycache__/unit_definitions.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/__pycache__/constants.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/__pycache__/prefix.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/mymatrix.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/unit_definitions.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/unit_math.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/prefix.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/baseunit.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/amd.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/xtcfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/statedatareporter.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/singleton.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/xtc_utils.cpython-312-x86_64-linux-gnu.so -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/charmm copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/charmm/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/charmm copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/charmm/_charmmfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/charmm copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/charmm/topologyobjects.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/charmm creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/charmm/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/charmm/__pycache__/_charmmfile.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/charmm/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/charmm/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/charmm/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/charmm/__pycache__/exceptions.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/charmm/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/charmm/__pycache__/topologyobjects.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/charmm/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/charmm/exceptions.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/charmm copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/amber_file_parser.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbstructure.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader/PdbxContainers.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader/PdbxReader.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader/PdbxParser.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader/PdbxReaderTests.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader/__pycache__/PdbxContainers.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader/__pycache__/PdbxReader.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader/PdbxReadWriteTests.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/writer copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/writer/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/writer copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/writer/PdbxWriterTests.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/writer copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/writer/PdbxWriter.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/writer creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/unitcell.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/__pycache__/argtracker.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/__pycache__/amber_file_parser.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/__pycache__/unitcell.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/__pycache__/singleton.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/__pycache__/pdbstructure.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/__pycache__/customgbforces.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/customgbforces.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/compiled.cpython-312-x86_64-linux-gnu.so -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/argtracker.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/xtcreporter.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/topology.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/pdbfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/amberprmtopfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/metadynamics.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/charmmpsffile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/modeller.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/pdbreporter.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/element.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/simulatedtempering.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/desmonddmsfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/amberinpcrdfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/pdbxfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/charmmcrdfiles.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/charmmparameterset.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/checkpointreporter.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/amberprmtopfile.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/xtcreporter.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/metadynamics.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/modeller.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/topology.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/amberinpcrdfile.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/pdbfile.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/xtcfile.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/simulation.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/pdbxfile.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/element.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/charmmpsffile.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/charmmcrdfiles.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/desmonddmsfile.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/statedatareporter.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/dcdfile.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/pdbreporter.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/gromacstopfile.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/simulatedtempering.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/gromacsgrofile.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/forcefield.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/dcdreporter.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/implicit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/implicit/obc2.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/implicit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/implicit/gbn2.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/implicit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/implicit/gbn.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/implicit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/implicit/obc1.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/implicit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/implicit/hct.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/implicit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber96_obc.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/absinth.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber96.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/tip4pfb.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber03_obc.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/DMPC.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber99sbnmr.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/opc.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/swm4ndp.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/tip5p.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/DPPC.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/POPE.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36/tip3p-pme-b.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36/tip3p-pme-f.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36/water.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36/tip5p.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36/tip4pew.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36/spce.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36/tip5pew.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36/tip4p2005.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amoeba2013.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14/lipid17.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14/tip4pfb.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14/protein.ff15ipq.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14/opc.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14/DNA.bsc1.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14/DNA.OL15.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14/tip4pew.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14/spce.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14/RNA.OL3.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14/tip3pfb.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14/tip3p.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14/opc3.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14/protein.ff14SB.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14/GLYCAM_06j-1.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/glycam-hydrogens.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/tip5p.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber99Test.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amoeba2009.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber99_obc.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/POPC.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amberfb15.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/tip4pew.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/spce.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/tip3p.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/pdbNames.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/iamoeba.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/swm4ndp.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber99sb.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14-all.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber10.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/tip3pfb.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/spce.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/residues.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/tip3p.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm_polar_2013.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber99sbildn.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/DLPE.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/opc3.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/hydrogens.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber10_obc.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/tip4pew.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm_polar_2019.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/DOPC.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amoeba2018.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/test.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amoeba2018_gk.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/DLPC.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amoeba2009_gk.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amoeba2013_gk.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber03.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/dcdreporter.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/checkpointreporter.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/dcdfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/gromacsgrofile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/charmmparameterset.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/simulation.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/gromacstopfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/forcefield.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/openmm.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/__pycache__/vec3.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/__pycache__/version.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/__pycache__/amd.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/__pycache__/openmm.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/__pycache__/mtsintegrator.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/version.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/vec3.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/mtsintegrator.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/testInstallation.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/_openmm.cpython-312-x86_64-linux-gnu.so -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/triclinic.pdbx -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/gpcr.cif -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/water_methanol.prm -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/amoeba-ion-in-water.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/MoS2.prm -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/5dhfr_cube.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/bnz.gro -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/explicit.top -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/aidilnaaaaa.gro -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/water-box-216.prmtop -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/bcd-nabumetone_lig.dms -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/ff_with_includes.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/impropers_ordering_tetrapeptide.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/1ppt.top -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/alanine-dipeptide-implicit.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/ala3_solv.parm7 -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/2ci2.pdb.top -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/par_all36_lipid.prm -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/crdsonly.rst7 -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/aidilnaaaaa.top -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/DNA_mbondi3.prmtop -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/top_all36_cgenff.rtf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/water_methanol.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/nacl-water.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/tip5p.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/altlocs2.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/bcd-nabumetone_rcpt.dms -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/ala_ala_ala.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/alanine-dipeptide-implicit.prmtop -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/par_all36_cgenff.prm -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/peptide_with_tip4p.inpcrd -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/alanine-dipeptide-explicit.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/multichain.pdbx -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/DNA_mbondi3.inpcrd -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/5dhfr_cube.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/ions.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/triclinic.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/chlb_cgenff.crd -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/formaldehyde.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/nucleic.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/alanine-dipeptide-explicit-amber99SBILDN-tip3p.dms -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/chl1.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/toppar_drude_master_protein_2013e.str -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/charmm22.par -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/crds_vels_box.rst7 -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/tip4pew.top -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/toppar_all36_lipid_cholesterol.str -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/ala_ala_ala.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/ionic.gro -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/bnz.top -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/par_all22_prot_with_mass.inp -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/1ppt.gro -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/charmm22.rtf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/Mg_water.prmtop -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/crds_box.rst7 -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/18protein.parm7 -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/ala3_solv_drude.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/alanine-dipeptide-explicit.prmtop -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/crds_vels.rst7 -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/lysozyme-implicit.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/altlocs.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/opcbox.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/opc3box.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/triclinic.gro -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/chlb_cgenff.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/ala3_solv.crd -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/ala_ala_ala.xpsf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/methanol_ions.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems/charmm-solvated copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/charmm-solvated/m14.prm -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems/charmm-solvated copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/charmm-solvated/envi.str -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems/charmm-solvated copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/charmm-solvated/isa_wat.3_kcl.m14.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems/charmm-solvated copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/charmm-solvated/m14.rtf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems/charmm-solvated copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/4TVP-dmj_wat-ion.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/improper.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/ala3_solv_drude.crd -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/1T2Y.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/ala_ala_ala.crd -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/par_all36_prot.prm -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/test_amber_ff.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/T4-lysozyme-L99A-p-xylene-implicit.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/implicit.top -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/2ci2.pdb.gro -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/alanine-dipeptide-implicit.inpcrd -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/toppar_water_ions.str -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/ions.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/toppar_drude_nucleic_acid_2017b.str -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/bpti.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/insertions.pdbx -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/lysozyme-implicit-forces.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/ala3_solv.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/peptide_with_tip4p.prmtop -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/ff14ipq.rst7 -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/alanine-dipeptide-amoeba-forces.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/MoS2.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/chl1.crd -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/glycopeptide.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems/ala-ala-ala-implicit-forces copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/ala-ala-ala-implicit-forces/GBn2_NoCutoff.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems/ala-ala-ala-implicit-forces copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/ala-ala-ala-implicit-forces/OBC2_NonPeriodic_Salt.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems/ala-ala-ala-implicit-forces copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/ala-ala-ala-implicit-forces/HCT_NoCutoff.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems/ala-ala-ala-implicit-forces copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/ala-ala-ala-implicit-forces/GBn_NoCutoff_Salt.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems/ala-ala-ala-implicit-forces copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/ala-ala-ala-implicit-forces/OBC1_NonPeriodic.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems/ala-ala-ala-implicit-forces copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/ionic.top -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems/alanine-dipeptide-implicit-forces copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/alanine-dipeptide-implicit-forces/GBn2_NoCutoff.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems/alanine-dipeptide-implicit-forces copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/alanine-dipeptide-implicit-forces/OBC2_NonPeriodic_Salt.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems/alanine-dipeptide-implicit-forces copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/alanine-dipeptide-implicit-forces/HCT_NoCutoff.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems/alanine-dipeptide-implicit-forces copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/alanine-dipeptide-implicit-forces/GBn_NoCutoff_Salt.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems/alanine-dipeptide-implicit-forces copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/alanine-dipeptide-implicit-forces/OBC1_NonPeriodic.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems/alanine-dipeptide-implicit-forces copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/cyt-gua-cyt.crd -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/ff14ipq.parm7 -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/amber.ncrst -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/methanol-box.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/ala_ala_ala_drude.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/par_all22_prot.inp -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/cyt-gua-cyt.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/methanol_ions.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/ala_ala_ala.vpsf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/tz2.truncoct.parm7 -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/tz2.truncoct.rst7 -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/Mg_water.inpcrd -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/18protein.rst7 -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/gaffwat.parm7 -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/alanine-dipeptide-explicit.inpcrd -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/MoS2.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/simtk/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/simtk/unit/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/simtk/openmm/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/simtk/openmm/app/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/__init__.py to __init__.cpython-312.pyc /usr/lib/python3.12/dist-packages/openmm/__init__.py:16: SyntaxWarning: invalid escape sequence '\p' byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/unit.py to unit.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/constants.py to constants.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/doctests.py to doctests.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/unit_operators.py to unit_operators.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/quantity.py to quantity.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/standard_dimensions.py to standard_dimensions.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/basedimension.py to basedimension.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/mymatrix.py to mymatrix.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/unit_definitions.py to unit_definitions.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/unit_math.py to unit_math.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/prefix.py to prefix.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/baseunit.py to baseunit.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/amd.py to amd.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/xtcfile.py to xtcfile.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/statedatareporter.py to statedatareporter.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/singleton.py to singleton.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/charmm/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/charmm/_charmmfile.py to _charmmfile.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/charmm/topologyobjects.py to topologyobjects.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/charmm/exceptions.py to exceptions.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/amber_file_parser.py to amber_file_parser.cpython-312.pyc /usr/lib/python3.12/dist-packages/openmm/app/internal/amber_file_parser.py:65: SyntaxWarning: invalid escape sequence '\(' byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbstructure.py to pdbstructure.cpython-312.pyc /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbstructure.py:1071: SyntaxWarning: invalid escape sequence '\.' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbstructure.py:1082: SyntaxWarning: invalid escape sequence '\.' byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxContainers.py to PdbxContainers.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxReader.py to PdbxReader.cpython-312.pyc /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxReader.py:347: SyntaxWarning: invalid escape sequence '\S' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxReader.py:349: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxReader.py:350: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxReader.py:352: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxReader.py:354: SyntaxWarning: invalid escape sequence '\S' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxReader.py:419: SyntaxWarning: invalid escape sequence '\S' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxReader.py:421: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxReader.py:423: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxReader.py:425: SyntaxWarning: invalid escape sequence '\S' byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxParser.py to PdbxParser.cpython-312.pyc /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxParser.py:358: SyntaxWarning: invalid escape sequence '\S' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxParser.py:360: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxParser.py:361: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxParser.py:363: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxParser.py:365: SyntaxWarning: invalid escape sequence '\S' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxParser.py:416: SyntaxWarning: invalid escape sequence '\S' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxParser.py:444: SyntaxWarning: invalid escape sequence '\S' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxParser.py:446: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxParser.py:448: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxParser.py:450: SyntaxWarning: invalid escape sequence '\S' byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxReaderTests.py to PdbxReaderTests.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxReadWriteTests.py to PdbxReadWriteTests.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/writer/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/writer/PdbxWriterTests.py to PdbxWriterTests.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/writer/PdbxWriter.py to PdbxWriter.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/unitcell.py to unitcell.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/customgbforces.py to customgbforces.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/argtracker.py to argtracker.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/xtcreporter.py to xtcreporter.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/topology.py to topology.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/pdbfile.py to pdbfile.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/amberprmtopfile.py to amberprmtopfile.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/metadynamics.py to metadynamics.cpython-312.pyc /usr/lib/python3.12/dist-packages/openmm/app/metadynamics.py:247: SyntaxWarning: invalid escape sequence '\.' byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/charmmpsffile.py to charmmpsffile.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/modeller.py to modeller.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/pdbreporter.py to pdbreporter.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/element.py to element.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/simulatedtempering.py to simulatedtempering.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/desmonddmsfile.py to desmonddmsfile.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/amberinpcrdfile.py to amberinpcrdfile.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/pdbxfile.py to pdbxfile.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/charmmcrdfiles.py to charmmcrdfiles.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/dcdreporter.py to dcdreporter.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/checkpointreporter.py to checkpointreporter.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/dcdfile.py to dcdfile.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/gromacsgrofile.py to gromacsgrofile.cpython-312.pyc /usr/lib/python3.12/dist-packages/openmm/app/gromacsgrofile.py:62: SyntaxWarning: invalid escape sequence '\.' byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/charmmparameterset.py to charmmparameterset.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/simulation.py to simulation.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/gromacstopfile.py to gromacstopfile.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/forcefield.py to forcefield.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/openmm.py to openmm.cpython-312.pyc /usr/lib/python3.12/dist-packages/openmm/openmm.py:19157: SyntaxWarning: invalid escape sequence '\S' byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/version.py to version.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/vec3.py to vec3.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/mtsintegrator.py to mtsintegrator.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/testInstallation.py to testInstallation.cpython-312.pyc running install_egg_info running egg_info creating OpenMM.egg-info writing OpenMM.egg-info/PKG-INFO writing dependency_links to OpenMM.egg-info/dependency_links.txt writing top-level names to OpenMM.egg-info/top_level.txt writing manifest file 'OpenMM.egg-info/SOURCES.txt' dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative reading manifest file 'OpenMM.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching '*.txt' warning: no files found matching 'README' anywhere in distribution warning: no files found matching '*.txt' under directory 'simtk' warning: no files found matching '*.txt' under directory 'openmm' warning: no files found matching '*.so' under directory 'openmm' warning: no files found matching '*.dll' under directory 'openmm' warning: no files found matching '*.lib' under directory 'openmm' warning: no files found matching '*.dylib' under directory 'openmm' warning: no files found matching '*.txt' under directory 'src' warning: no files found matching '*.c' under directory 'src' warning: no files found matching 'Doxyfile' under directory 'src' no previously-included directories found matching 'src/swig_doxygen/doxygen/html' no previously-included directories found matching 'src/swig_doxygen/doxygen/xml' warning: no previously-included files matching 'CMakeLists.txt' found anywhere in distribution writing manifest file 'OpenMM.egg-info/SOURCES.txt' Copying OpenMM.egg-info to /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/OpenMM-8.1.1.egg-info Skipping SOURCES.txt running install_scripts I: pybuild base:311: /usr/bin/python3 setup.py install --root /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp author Peter Eastman data_files [] description Python wrapper for OpenMM (a C++ MD package) download_url https://openmm.org ext_modules[, , ] license Python Software Foundation License (BSD-like) long_descriptionOpenMM is a toolkit for molecular simulation. It can be used either as a stand-alone application for running simulations, or as a library you call from your own code. It provides a combination of extreme flexibility (through custom forces and integrators), openness, and high performance (especially on recent GPUs) that make it truly unique among simulation codes. name OpenMM package_data{'openmm': [], 'openmm.app': ['data/*.xml', 'data/*.pdb', 'data/amber14/*.xml', 'data/charmm36/*.xml', 'data/implicit/*.xml'], 'openmm.app.internal': []} packages['simtk', 'simtk.unit', 'simtk.openmm', 'simtk.openmm.app', 'openmm', 'openmm.unit', 'openmm', 'openmm.app', 'openmm.app.internal', 'openmm.app.internal.charmm', 'openmm.app.internal.pdbx', 'openmm.app.internal.pdbx.reader', 'openmm.app.internal.pdbx.writer'] platforms ['Linux', 'Mac OS X', 'Windows'] url https://openmm.org version 8.1.1 running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running build running build_py copying openmm/version.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm running build_ext running install_lib creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11 creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/simtk copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/simtk/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/simtk creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/simtk/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/simtk/unit/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/simtk/unit creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/simtk/openmm copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/simtk/openmm/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/simtk/openmm creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/simtk/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/simtk/openmm/app/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/simtk/openmm/app creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit/unit.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit/constants.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit/doctests.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit/unit_operators.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit/quantity.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit/standard_dimensions.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit/basedimension.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit/__pycache__/prefix.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit/__pycache__/mymatrix.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit/__pycache__/unit_operators.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit/__pycache__/__init__.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit/__pycache__/quantity.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit/__pycache__/unit_definitions.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit/__pycache__/constants.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit/__pycache__/basedimension.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit/__pycache__/unit_math.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit/__pycache__/unit.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit/__pycache__/standard_dimensions.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit/__pycache__/baseunit.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit/mymatrix.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit/unit_definitions.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit/unit_math.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit/prefix.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit/baseunit.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/amd.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/xtcfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/statedatareporter.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/singleton.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/charmm copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/charmm/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/charmm copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/charmm/_charmmfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/charmm copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/charmm/topologyobjects.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/charmm creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/charmm/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/charmm/__pycache__/topologyobjects.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/charmm/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/charmm/__pycache__/__init__.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/charmm/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/charmm/__pycache__/exceptions.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/charmm/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/charmm/__pycache__/_charmmfile.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/charmm/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/charmm/exceptions.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/charmm copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/amber_file_parser.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbstructure.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/reader copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx/reader/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/reader copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx/reader/PdbxContainers.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/reader copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx/reader/PdbxReader.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/reader copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx/reader/PdbxParser.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/reader copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx/reader/PdbxReaderTests.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/reader creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/reader/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx/reader/__pycache__/__init__.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/reader/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx/reader/__pycache__/PdbxContainers.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/reader/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx/reader/__pycache__/PdbxReader.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/reader/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx/reader/PdbxReadWriteTests.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/reader creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/writer copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx/writer/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/writer copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx/writer/PdbxWriterTests.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/writer copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx/writer/PdbxWriter.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/writer creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx/__pycache__/__init__.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/compiled.cpython-311-x86_64-linux-gnu.so -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/xtc_utils.cpython-311-x86_64-linux-gnu.so -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/unitcell.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/__pycache__/amber_file_parser.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/__pycache__/argtracker.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/__pycache__/__init__.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/__pycache__/customgbforces.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/__pycache__/pdbstructure.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/__pycache__/singleton.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/__pycache__/unitcell.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/customgbforces.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/argtracker.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/xtcreporter.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/topology.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/pdbfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/amberprmtopfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/metadynamics.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/charmmpsffile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/modeller.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/pdbreporter.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/element.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/simulatedtempering.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/desmonddmsfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/amberinpcrdfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/pdbxfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/charmmcrdfiles.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/__pycache__/metadynamics.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/__pycache__/xtcreporter.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/__pycache__/simulatedtempering.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/__pycache__/gromacstopfile.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/__pycache__/element.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/__pycache__/charmmparameterset.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/__pycache__/gromacsgrofile.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/__pycache__/pdbreporter.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/__pycache__/amberinpcrdfile.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/__pycache__/__init__.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/__pycache__/pdbxfile.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/__pycache__/simulation.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/__pycache__/pdbfile.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/__pycache__/xtcfile.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/__pycache__/dcdfile.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/__pycache__/topology.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/__pycache__/checkpointreporter.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/__pycache__/desmonddmsfile.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/__pycache__/forcefield.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/__pycache__/charmmcrdfiles.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/__pycache__/modeller.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/__pycache__/dcdreporter.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/__pycache__/amberprmtopfile.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/__pycache__/statedatareporter.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/__pycache__/charmmpsffile.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__pycache__ creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/implicit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/implicit/obc2.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/implicit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/implicit/gbn2.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/implicit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/implicit/gbn.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/implicit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/implicit/obc1.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/implicit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/implicit/hct.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/implicit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber96_obc.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/absinth.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber96.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/tip4pfb.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber03_obc.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/DMPC.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber99sbnmr.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/opc.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/swm4ndp.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/tip5p.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/DPPC.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/charmm36.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/POPE.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/charmm36/tip3p-pme-b.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/charmm36/tip3p-pme-f.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/charmm36/water.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/charmm36/tip5p.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/charmm36/tip4pew.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/charmm36/spce.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/charmm36/tip5pew.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/charmm36/tip4p2005.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amoeba2013.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14/lipid17.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14/tip4pfb.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14/protein.ff15ipq.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14/opc.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14/DNA.bsc1.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14/DNA.OL15.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14/tip4pew.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14/spce.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14/RNA.OL3.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14/tip3pfb.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14/tip3p.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14/opc3.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14/protein.ff14SB.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14/GLYCAM_06j-1.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/glycam-hydrogens.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/tip5p.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber99Test.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amoeba2009.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber99_obc.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/POPC.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amberfb15.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/tip4pew.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/spce.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/tip3p.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/pdbNames.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/iamoeba.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/swm4ndp.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber99sb.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14-all.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber10.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/tip3pfb.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/spce.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/residues.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/tip3p.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/charmm_polar_2013.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber99sbildn.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/DLPE.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/opc3.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/hydrogens.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber10_obc.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/tip4pew.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/charmm_polar_2019.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/DOPC.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amoeba2018.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/test.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amoeba2018_gk.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/DLPC.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amoeba2009_gk.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amoeba2013_gk.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber03.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/dcdreporter.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/checkpointreporter.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/dcdfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/gromacsgrofile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/charmmparameterset.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/simulation.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/gromacstopfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/forcefield.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/_openmm.cpython-311-x86_64-linux-gnu.so -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/openmm.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/__pycache__/amd.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/__pycache__/mtsintegrator.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/__pycache__/vec3.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/__pycache__/__init__.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/__pycache__/openmm.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/__pycache__/version.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/version.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/vec3.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/mtsintegrator.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/testInstallation.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/triclinic.pdbx -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/gpcr.cif -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/water_methanol.prm -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/amoeba-ion-in-water.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/MoS2.prm -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/5dhfr_cube.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/bnz.gro -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/explicit.top -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/aidilnaaaaa.gro -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/water-box-216.prmtop -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/bcd-nabumetone_lig.dms -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/ff_with_includes.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/impropers_ordering_tetrapeptide.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/1ppt.top -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/alanine-dipeptide-implicit.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/ala3_solv.parm7 -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/2ci2.pdb.top -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/par_all36_lipid.prm -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/crdsonly.rst7 -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/aidilnaaaaa.top -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/DNA_mbondi3.prmtop -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/top_all36_cgenff.rtf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/water_methanol.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/nacl-water.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/tip5p.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/altlocs2.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/bcd-nabumetone_rcpt.dms -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/ala_ala_ala.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/alanine-dipeptide-implicit.prmtop -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/par_all36_cgenff.prm -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/peptide_with_tip4p.inpcrd -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/alanine-dipeptide-explicit.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/multichain.pdbx -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/DNA_mbondi3.inpcrd -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/5dhfr_cube.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/ions.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/triclinic.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/chlb_cgenff.crd -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/formaldehyde.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/nucleic.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/alanine-dipeptide-explicit-amber99SBILDN-tip3p.dms -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/chl1.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/toppar_drude_master_protein_2013e.str -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/charmm22.par -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/crds_vels_box.rst7 -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/tip4pew.top -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/toppar_all36_lipid_cholesterol.str -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/ala_ala_ala.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/ionic.gro -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/bnz.top -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/par_all22_prot_with_mass.inp -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/1ppt.gro -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/charmm22.rtf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/Mg_water.prmtop -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/crds_box.rst7 -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/18protein.parm7 -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/ala3_solv_drude.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/alanine-dipeptide-explicit.prmtop -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/crds_vels.rst7 -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/lysozyme-implicit.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/altlocs.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/opcbox.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/opc3box.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/triclinic.gro -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/chlb_cgenff.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/ala3_solv.crd -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/ala_ala_ala.xpsf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/methanol_ions.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems/charmm-solvated copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/charmm-solvated/m14.prm -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems/charmm-solvated copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/charmm-solvated/envi.str -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems/charmm-solvated copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/charmm-solvated/isa_wat.3_kcl.m14.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems/charmm-solvated copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/charmm-solvated/m14.rtf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems/charmm-solvated copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/4TVP-dmj_wat-ion.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/improper.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/ala3_solv_drude.crd -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/1T2Y.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/ala_ala_ala.crd -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/par_all36_prot.prm -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/test_amber_ff.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/T4-lysozyme-L99A-p-xylene-implicit.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/implicit.top -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/2ci2.pdb.gro -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/alanine-dipeptide-implicit.inpcrd -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/toppar_water_ions.str -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/ions.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/toppar_drude_nucleic_acid_2017b.str -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/bpti.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/insertions.pdbx -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/lysozyme-implicit-forces.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/ala3_solv.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/peptide_with_tip4p.prmtop -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/ff14ipq.rst7 -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/alanine-dipeptide-amoeba-forces.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/MoS2.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/chl1.crd -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/glycopeptide.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems/ala-ala-ala-implicit-forces copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/ala-ala-ala-implicit-forces/GBn2_NoCutoff.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems/ala-ala-ala-implicit-forces copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/ala-ala-ala-implicit-forces/OBC2_NonPeriodic_Salt.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems/ala-ala-ala-implicit-forces copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/ala-ala-ala-implicit-forces/HCT_NoCutoff.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems/ala-ala-ala-implicit-forces copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/ala-ala-ala-implicit-forces/GBn_NoCutoff_Salt.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems/ala-ala-ala-implicit-forces copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/ala-ala-ala-implicit-forces/OBC1_NonPeriodic.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems/ala-ala-ala-implicit-forces copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/ionic.top -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems/alanine-dipeptide-implicit-forces copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/alanine-dipeptide-implicit-forces/GBn2_NoCutoff.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems/alanine-dipeptide-implicit-forces copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/alanine-dipeptide-implicit-forces/OBC2_NonPeriodic_Salt.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems/alanine-dipeptide-implicit-forces copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/alanine-dipeptide-implicit-forces/HCT_NoCutoff.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems/alanine-dipeptide-implicit-forces copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/alanine-dipeptide-implicit-forces/GBn_NoCutoff_Salt.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems/alanine-dipeptide-implicit-forces copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/alanine-dipeptide-implicit-forces/OBC1_NonPeriodic.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems/alanine-dipeptide-implicit-forces copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/cyt-gua-cyt.crd -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/ff14ipq.parm7 -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/amber.ncrst -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/methanol-box.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/ala_ala_ala_drude.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/par_all22_prot.inp -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/cyt-gua-cyt.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/methanol_ions.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/ala_ala_ala.vpsf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/tz2.truncoct.parm7 -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/tz2.truncoct.rst7 -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/Mg_water.inpcrd -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/18protein.rst7 -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/gaffwat.parm7 -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/alanine-dipeptide-explicit.inpcrd -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/MoS2.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/simtk/__init__.py to __init__.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/simtk/unit/__init__.py to __init__.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/simtk/openmm/__init__.py to __init__.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/simtk/openmm/app/__init__.py to __init__.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/__init__.py to __init__.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit/__init__.py to __init__.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit/unit.py to unit.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit/constants.py to constants.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit/doctests.py to doctests.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit/unit_operators.py to unit_operators.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit/quantity.py to quantity.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit/standard_dimensions.py to standard_dimensions.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit/basedimension.py to basedimension.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit/mymatrix.py to mymatrix.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit/unit_definitions.py to unit_definitions.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit/unit_math.py to unit_math.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit/prefix.py to prefix.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit/baseunit.py to baseunit.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/amd.py to amd.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__init__.py to __init__.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/xtcfile.py to xtcfile.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/statedatareporter.py to statedatareporter.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/__init__.py to __init__.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/singleton.py to singleton.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/charmm/__init__.py to __init__.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/charmm/_charmmfile.py to _charmmfile.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/charmm/topologyobjects.py to topologyobjects.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/charmm/exceptions.py to exceptions.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/amber_file_parser.py to amber_file_parser.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbstructure.py to pdbstructure.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/__init__.py to __init__.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/reader/__init__.py to __init__.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/reader/PdbxContainers.py to PdbxContainers.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/reader/PdbxReader.py to PdbxReader.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/reader/PdbxParser.py to PdbxParser.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/reader/PdbxReaderTests.py to PdbxReaderTests.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/reader/PdbxReadWriteTests.py to PdbxReadWriteTests.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/writer/__init__.py to __init__.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/writer/PdbxWriterTests.py to PdbxWriterTests.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/writer/PdbxWriter.py to PdbxWriter.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/unitcell.py to unitcell.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/customgbforces.py to customgbforces.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/argtracker.py to argtracker.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/xtcreporter.py to xtcreporter.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/topology.py to topology.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/pdbfile.py to pdbfile.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/amberprmtopfile.py to amberprmtopfile.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/metadynamics.py to metadynamics.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/charmmpsffile.py to charmmpsffile.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/modeller.py to modeller.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/pdbreporter.py to pdbreporter.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/element.py to element.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/simulatedtempering.py to simulatedtempering.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/desmonddmsfile.py to desmonddmsfile.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/amberinpcrdfile.py to amberinpcrdfile.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/pdbxfile.py to pdbxfile.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/charmmcrdfiles.py to charmmcrdfiles.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/dcdreporter.py to dcdreporter.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/checkpointreporter.py to checkpointreporter.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/dcdfile.py to dcdfile.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/gromacsgrofile.py to gromacsgrofile.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/charmmparameterset.py to charmmparameterset.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/simulation.py to simulation.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/gromacstopfile.py to gromacstopfile.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/forcefield.py to forcefield.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/openmm.py to openmm.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/version.py to version.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/vec3.py to vec3.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/mtsintegrator.py to mtsintegrator.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/testInstallation.py to testInstallation.cpython-311.pyc running install_egg_info running egg_info writing OpenMM.egg-info/PKG-INFO writing dependency_links to OpenMM.egg-info/dependency_links.txt writing top-level names to OpenMM.egg-info/top_level.txt dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative reading manifest file 'OpenMM.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching '*.txt' warning: no files found matching 'README' anywhere in distribution warning: no files found matching '*.txt' under directory 'simtk' warning: no files found matching '*.txt' under directory 'openmm' warning: no files found matching '*.so' under directory 'openmm' warning: no files found matching '*.dll' under directory 'openmm' warning: no files found matching '*.lib' under directory 'openmm' warning: no files found matching '*.dylib' under directory 'openmm' warning: no files found matching '*.txt' under directory 'src' warning: no files found matching '*.c' under directory 'src' warning: no files found matching 'Doxyfile' under directory 'src' no previously-included directories found matching 'src/swig_doxygen/doxygen/html' no previously-included directories found matching 'src/swig_doxygen/doxygen/xml' warning: no previously-included files matching 'CMakeLists.txt' found anywhere in distribution writing manifest file 'OpenMM.egg-info/SOURCES.txt' Copying OpenMM.egg-info to /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/OpenMM-8.1.1.egg-info Skipping SOURCES.txt running install_scripts make[1]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg' dh_install -O--buildsystem=cmake dh_installdocs -O--buildsystem=cmake dh_installchangelogs -O--buildsystem=cmake debian/rules override_dh_python3 make[1]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg' dh_python3 find debian/python3-openmm -name '*.py' \ | xargs sed -i 's/^#!\/bin\/env python/#!\/usr\/bin\/python3/' find debian/python3-openmm -name __pycache__ \ | xargs rm -rf find debian/python3-openmm -name '_openmm.*.so' \ | xargs chrpath --replace /usr/lib/x86_64-linux-gnu/openmm debian/python3-openmm/usr/lib/python3/dist-packages/openmm/_openmm.cpython-311-x86_64-linux-gnu.so: RUNPATH=/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu debian/python3-openmm/usr/lib/python3/dist-packages/openmm/_openmm.cpython-311-x86_64-linux-gnu.so: new RUNPATH: /usr/lib/x86_64-linux-gnu/openmm debian/python3-openmm/usr/lib/python3/dist-packages/openmm/_openmm.cpython-312-x86_64-linux-gnu.so: RUNPATH=/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu debian/python3-openmm/usr/lib/python3/dist-packages/openmm/_openmm.cpython-312-x86_64-linux-gnu.so: new RUNPATH: /usr/lib/x86_64-linux-gnu/openmm make[1]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg' dh_installsystemduser -O--buildsystem=cmake dh_perl -O--buildsystem=cmake dh_link -O--buildsystem=cmake dh_strip_nondeterminism -O--buildsystem=cmake dh_compress -O--buildsystem=cmake dh_fixperms -O--buildsystem=cmake dh_missing -O--buildsystem=cmake dh_dwz -a -O--buildsystem=cmake dh_strip -a -O--buildsystem=cmake dh_makeshlibs -a -O--buildsystem=cmake debian/rules override_dh_shlibdeps make[1]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg' dh_shlibdeps --dpkg-shlibdeps-params=--ignore-missing-info dpkg-shlibdeps: warning: cannot find library libOpenMMOpenCL.so needed by debian/libopenmm-plugins/usr/lib/x86_64-linux-gnu/openmm/plugins/libOpenMMDrudeOpenCL.so (ELF format: 'elf64-x86-64' abi: 'ELF:64:l:amd64:0'; RPATH: '') dpkg-shlibdeps: warning: cannot find library libOpenMMDrude.so needed by debian/libopenmm-plugins/usr/lib/x86_64-linux-gnu/openmm/plugins/libOpenMMDrudeOpenCL.so (ELF format: 'elf64-x86-64' abi: 'ELF:64:l:amd64:0'; RPATH: '') dpkg-shlibdeps: warning: cannot find library libOpenMMAmoeba.so needed by debian/python3-openmm/usr/lib/python3/dist-packages/openmm/_openmm.cpython-311-x86_64-linux-gnu.so (ELF format: 'elf64-x86-64' abi: 'ELF:64:l:amd64:0'; RPATH: '/usr/lib/x86_64-linux-gnu/openmm') dpkg-shlibdeps: warning: cannot find library libOpenMMRPMD.so needed by debian/python3-openmm/usr/lib/python3/dist-packages/openmm/_openmm.cpython-311-x86_64-linux-gnu.so (ELF format: 'elf64-x86-64' abi: 'ELF:64:l:amd64:0'; RPATH: '/usr/lib/x86_64-linux-gnu/openmm') dpkg-shlibdeps: warning: cannot find library libOpenMMDrude.so needed by debian/python3-openmm/usr/lib/python3/dist-packages/openmm/_openmm.cpython-311-x86_64-linux-gnu.so (ELF format: 'elf64-x86-64' abi: 'ELF:64:l:amd64:0'; RPATH: '/usr/lib/x86_64-linux-gnu/openmm') dpkg-shlibdeps: warning: cannot find library libOpenMMAmoeba.so needed by debian/libopenmm-plugins/usr/lib/x86_64-linux-gnu/openmm/plugins/libOpenMMAmoebaReference.so (ELF format: 'elf64-x86-64' abi: 'ELF:64:l:amd64:0'; RPATH: '') dpkg-shlibdeps: warning: cannot find library libOpenMMOpenCL.so needed by debian/libopenmm-plugins/usr/lib/x86_64-linux-gnu/openmm/plugins/libOpenMMRPMDOpenCL.so (ELF format: 'elf64-x86-64' abi: 'ELF:64:l:amd64:0'; RPATH: '') dpkg-shlibdeps: warning: cannot find library libOpenMMDrude.so needed by debian/libopenmm-plugins/usr/lib/x86_64-linux-gnu/openmm/plugins/libOpenMMDrudeReference.so (ELF format: 'elf64-x86-64' abi: 'ELF:64:l:amd64:0'; RPATH: '') dpkg-shlibdeps: warning: cannot find library libOpenMMOpenCL.so needed by debian/libopenmm-plugins/usr/lib/x86_64-linux-gnu/openmm/plugins/libOpenMMAmoebaOpenCL.so (ELF format: 'elf64-x86-64' abi: 'ELF:64:l:amd64:0'; RPATH: '') dpkg-shlibdeps: warning: cannot find library libOpenMMAmoeba.so needed by debian/libopenmm-plugins/usr/lib/x86_64-linux-gnu/openmm/plugins/libOpenMMAmoebaOpenCL.so (ELF format: 'elf64-x86-64' abi: 'ELF:64:l:amd64:0'; RPATH: '') dpkg-shlibdeps: warning: cannot find library libOpenMMAmoeba.so needed by debian/python3-openmm/usr/lib/python3/dist-packages/openmm/_openmm.cpython-312-x86_64-linux-gnu.so (ELF format: 'elf64-x86-64' abi: 'ELF:64:l:amd64:0'; RPATH: '/usr/lib/x86_64-linux-gnu/openmm') dpkg-shlibdeps: warning: cannot find library libOpenMMRPMD.so needed by debian/python3-openmm/usr/lib/python3/dist-packages/openmm/_openmm.cpython-312-x86_64-linux-gnu.so (ELF format: 'elf64-x86-64' abi: 'ELF:64:l:amd64:0'; RPATH: '/usr/lib/x86_64-linux-gnu/openmm') dpkg-shlibdeps: warning: cannot find library libOpenMMDrude.so needed by debian/python3-openmm/usr/lib/python3/dist-packages/openmm/_openmm.cpython-312-x86_64-linux-gnu.so (ELF format: 'elf64-x86-64' abi: 'ELF:64:l:amd64:0'; RPATH: '/usr/lib/x86_64-linux-gnu/openmm') make[1]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg' dh_installdeb -O--buildsystem=cmake dh_numpy3 -O--buildsystem=cmake dh_gencontrol -O--buildsystem=cmake dpkg-gencontrol: warning: package libopenmm-dev: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package libopenmm8.1: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: Provides field of package python3-openmm: substitution variable ${python3:Provides} used, but is not defined dpkg-gencontrol: warning: package libopenmm-plugins: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package libopenmm-dev: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package libopenmm8.1: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package libopenmm-plugins: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: Provides field of package python3-openmm: substitution variable ${python3:Provides} used, but is not defined dh_md5sums -O--buildsystem=cmake dh_builddeb -O--buildsystem=cmake dpkg-deb: building package 'libopenmm8.1' in '../libopenmm8.1_8.1.1+dfsg-1_amd64.deb'. dpkg-deb: building package 'libopenmm-plugins-dbgsym' in '../libopenmm-plugins-dbgsym_8.1.1+dfsg-1_amd64.deb'. dpkg-deb: building package 'libopenmm-plugins' in '../libopenmm-plugins_8.1.1+dfsg-1_amd64.deb'. dpkg-deb: building package 'libopenmm-dev' in '../libopenmm-dev_8.1.1+dfsg-1_amd64.deb'. dpkg-deb: building package 'python3-openmm-dbgsym' in '../python3-openmm-dbgsym_8.1.1+dfsg-1_amd64.deb'. dpkg-deb: building package 'libopenmm8.1-dbgsym' in '../libopenmm8.1-dbgsym_8.1.1+dfsg-1_amd64.deb'. dpkg-deb: building package 'python3-openmm' in '../python3-openmm_8.1.1+dfsg-1_amd64.deb'. dpkg-deb: building package 'libopenmm-dev-dbgsym' in '../libopenmm-dev-dbgsym_8.1.1+dfsg-1_amd64.deb'. dpkg-genbuildinfo --build=binary -O../openmm_8.1.1+dfsg-1_amd64.buildinfo dpkg-genchanges --build=binary -O../openmm_8.1.1+dfsg-1_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/4096833 and its subdirectories I: Current time: Thu Jun 6 04:11:17 -12 2024 I: pbuilder-time-stamp: 1717690277 Thu Jun 6 16:11:20 UTC 2024 I: 1st build successful. Starting 2nd build on remote node ionos5-amd64.debian.net. Thu Jun 6 16:11:20 UTC 2024 I: Preparing to do remote build '2' on ionos5-amd64.debian.net. Thu Jun 6 16:51:00 UTC 2024 I: Deleting $TMPDIR on ionos5-amd64.debian.net. Thu Jun 6 16:51:01 UTC 2024 I: openmm_8.1.1+dfsg-1_amd64.changes: Format: 1.8 Date: Thu, 16 May 2024 02:25:28 -0400 Source: openmm Binary: libopenmm-dev libopenmm-dev-dbgsym libopenmm-plugins libopenmm-plugins-dbgsym libopenmm8.1 libopenmm8.1-dbgsym python3-openmm python3-openmm-dbgsym Architecture: amd64 Version: 8.1.1+dfsg-1 Distribution: unstable Urgency: medium Maintainer: Debichem Team Changed-By: Andrius Merkys Description: libopenmm-dev - C++ header files for the OpenMM library libopenmm-plugins - Plugins for the OpenMM library libopenmm8.1 - High-performance molecular simulation library python3-openmm - Python bindings for the OpenMM molecular simulation package Changes: openmm (8.1.1+dfsg-1) unstable; urgency=medium . * New upstream version 8.1.1+dfsg * Bump copyright years. Checksums-Sha1: d606314a6ed859040ae845afe206b52770a88785 2457676 libopenmm-dev-dbgsym_8.1.1+dfsg-1_amd64.deb b1ef8e8ed55afa99b71a295d9d3ad47797ae7d34 343824 libopenmm-dev_8.1.1+dfsg-1_amd64.deb 899875027c55cffe1c3da912d4672aa54e96e661 18218920 libopenmm-plugins-dbgsym_8.1.1+dfsg-1_amd64.deb 881e9a3bf86603e16bf8a66790c0cea901eb47f7 1422344 libopenmm-plugins_8.1.1+dfsg-1_amd64.deb 0e10bef6477f1273052959efde0968d0c4258074 18890516 libopenmm8.1-dbgsym_8.1.1+dfsg-1_amd64.deb e295906e1525ea14e013cecaa2c0001bb8a9b4d9 1033728 libopenmm8.1_8.1.1+dfsg-1_amd64.deb 06c8b4f4cdda979c2ae572fcde04f5acf51c69f5 9950 openmm_8.1.1+dfsg-1_amd64.buildinfo 1fb7dffbf9f0790ce2e8e9740712e5886f9b4515 10140980 python3-openmm-dbgsym_8.1.1+dfsg-1_amd64.deb 569e320cefc4a86ccc62f8a2a1aec027c11cc5d3 6884404 python3-openmm_8.1.1+dfsg-1_amd64.deb Checksums-Sha256: a2c8aa96de0fe774656cc13406e4744533e821ffcf458445b83acc6b623f2328 2457676 libopenmm-dev-dbgsym_8.1.1+dfsg-1_amd64.deb 96f0cb82885c8724f5009b303f2a6a3726a83c5f779edb54da93165c47c6cff8 343824 libopenmm-dev_8.1.1+dfsg-1_amd64.deb 9ebbecd5799b6895db664fd4938d46f040174b2628c988ca3831fbe0a44c5767 18218920 libopenmm-plugins-dbgsym_8.1.1+dfsg-1_amd64.deb 849e555525b0c85bb92c11510a93abcb95007bba624864675bbf55fb030e7768 1422344 libopenmm-plugins_8.1.1+dfsg-1_amd64.deb 28119afb40e5f46413b5f87bd660c88c69aece5e1d0b2277f38f25206327162e 18890516 libopenmm8.1-dbgsym_8.1.1+dfsg-1_amd64.deb cd7444186eae1f27829c8428804cd22e00e0c0e4d0009aa0d1c521ae3c103cb6 1033728 libopenmm8.1_8.1.1+dfsg-1_amd64.deb 6d2d5aa55b6b2a4b7f71c4825a23b6c3a62b471714ba51d81ade34c9b4814fdc 9950 openmm_8.1.1+dfsg-1_amd64.buildinfo 1c2b90d68863913082c2ae4b336ebb7df039fb00ebdb3efe354fce2045db7531 10140980 python3-openmm-dbgsym_8.1.1+dfsg-1_amd64.deb 48e7cf2dbe921733572bb4e2f8ad5ef59592b495c470e2fa68afd591f43d339c 6884404 python3-openmm_8.1.1+dfsg-1_amd64.deb Files: 7d9e861b03c3e77bdb5839cebacc82d7 2457676 debug optional libopenmm-dev-dbgsym_8.1.1+dfsg-1_amd64.deb 2d1a27c28b961274fa20d548328f919d 343824 libdevel optional libopenmm-dev_8.1.1+dfsg-1_amd64.deb f28d3ab7e343cd29a15a6b631c3ca7f9 18218920 debug optional libopenmm-plugins-dbgsym_8.1.1+dfsg-1_amd64.deb 684ac2a74c4cbdb15e6f7069531c6034 1422344 libs optional libopenmm-plugins_8.1.1+dfsg-1_amd64.deb eda797065dc787d220c3dbfcfc55ac61 18890516 debug optional libopenmm8.1-dbgsym_8.1.1+dfsg-1_amd64.deb 2848b0cfa19de2e5966991060843229b 1033728 libs optional libopenmm8.1_8.1.1+dfsg-1_amd64.deb b57a44aae42da276863a2aea5716a3e9 9950 libs optional openmm_8.1.1+dfsg-1_amd64.buildinfo fcc19c11e696fc12180d9bbd4549f72f 10140980 debug optional python3-openmm-dbgsym_8.1.1+dfsg-1_amd64.deb b1bb890cb28837873b4d438a8a8a4bad 6884404 python optional python3-openmm_8.1.1+dfsg-1_amd64.deb Thu Jun 6 16:51:01 UTC 2024 I: Preparing to do remote build '1' on ionos11-amd64.debian.net. Thu Jun 6 18:31:26 UTC 2024 I: Deleting $TMPDIR on ionos11-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Thu Jun 6 04:51:03 -12 2024 I: pbuilder-time-stamp: 1717692663 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [openmm_8.1.1+dfsg-1.dsc] I: copying [./openmm_8.1.1+dfsg.orig.tar.xz] I: copying [./openmm_8.1.1+dfsg-1.debian.tar.xz] I: Extracting source gpgv: Signature made Fri May 17 06:55:32 2024 gpgv: using RSA key 772292F6F7AC85FAE041D41EE5F43F9C2734F287 gpgv: issuer "merkys@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./openmm_8.1.1+dfsg-1.dsc: no acceptable signature found dpkg-source: info: extracting openmm in openmm-8.1.1+dfsg dpkg-source: info: unpacking openmm_8.1.1+dfsg.orig.tar.xz dpkg-source: info: unpacking openmm_8.1.1+dfsg-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying SIMDe.patch dpkg-source: info: applying skip-tests.patch dpkg-source: info: applying default_plugin_dir.diff dpkg-source: info: applying ignore-stochastic-test-failures.patch dpkg-source: info: applying reproducible-build.patch dpkg-source: info: applying disable-jit-on-armel-armhf.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/2026589/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='633e6c691d5b462e96f88098b704b5db' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='2026589' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.voPpt5q6/pbuilderrc_lQ0F --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.voPpt5q6/b1 --logfile b1/build.log openmm_8.1.1+dfsg-1.dsc' SUDO_GID='111' SUDO_UID='106' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://46.16.76.132:3128' I: uname -a Linux ionos11-amd64 6.1.0-21-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.90-1 (2024-05-03) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Jun 5 07:42 /bin -> usr/bin I: user script /srv/workspace/pbuilder/2026589/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: chrpath, cmake, cython3, debhelper-compat (= 13), dh-python, doxygen, dpkg-dev (>= 1.22.5), libsimde-dev, ocl-icd-opencl-dev, python3-all-dev:any, python3-numpy, python3-pytest, python3-pytest-xdist, python3-scipy, swig dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19716 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on chrpath; however: Package chrpath is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on cython3; however: Package cython3 is not installed. pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on doxygen; however: Package doxygen is not installed. pbuilder-satisfydepends-dummy depends on libsimde-dev; however: Package libsimde-dev is not installed. pbuilder-satisfydepends-dummy depends on ocl-icd-opencl-dev; however: Package ocl-icd-opencl-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-all-dev:any. pbuilder-satisfydepends-dummy depends on python3-numpy; however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest-xdist; however: Package python3-pytest-xdist is not installed. pbuilder-satisfydepends-dummy depends on python3-scipy; however: Package python3-scipy is not installed. pbuilder-satisfydepends-dummy depends on swig; however: Package swig is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} chrpath{a} cmake{a} cmake-data{a} cython3{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} doxygen{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13t64{a} libblas3{a} libbrotli1{a} libbsd0{a} libclang-cpp16t64{a} libclang1-16t64{a} libcom-err2{a} libcurl4t64{a} libdebhelper-perl{a} libedit2{a} libelf1t64{a} libexpat1{a} libexpat1-dev{a} libfile-stripnondeterminism-perl{a} libfmt9{a} libgfortran5{a} libgssapi-krb5-2{a} libicu72{a} libjs-jquery{a} libjs-sphinxdoc{a} libjs-underscore{a} libjsoncpp25{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} liblbfgsb0{a} libldap-2.5-0{a} libllvm16t64{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libpipeline1{a} libproc2-0{a} libpsl5t64{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.11-dev{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libpython3.11t64{a} libpython3.12-dev{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.12t64{a} libreadline8t64{a} librhash0{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsimde-dev{a} libssh2-1t64{a} libtool{a} libuchardet0{a} libuv1t64{a} libxml2{a} libz3-4{a} m4{a} man-db{a} media-types{a} netbase{a} ocl-icd-libopencl1{a} ocl-icd-opencl-dev{a} opencl-c-headers{a} opencl-clhpp-headers{a} po-debconf{a} procps{a} python3{a} python3-all{a} python3-all-dev{a} python3-decorator{a} python3-dev{a} python3-distutils{a} python3-execnet{a} python3-iniconfig{a} python3-lib2to3{a} python3-minimal{a} python3-numpy{a} python3-packaging{a} python3-pkg-resources{a} python3-pluggy{a} python3-pytest{a} python3-pytest-xdist{a} python3-scipy{a} python3-setuptools{a} python3.11{a} python3.11-dev{a} python3.11-minimal{a} python3.12{a} python3.12-dev{a} python3.12-minimal{a} readline-common{a} sensible-utils{a} swig{a} tzdata{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl javascript-common krb5-locales libarchive-cpio-perl libgl-dev libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx psmisc publicsuffix python3-pil python3-pygments wget 0 packages upgraded, 119 newly installed, 0 to remove and 0 not upgraded. Need to get 154 MB of archives. After unpacking 722 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main amd64 libpython3.11-minimal amd64 3.11.9-1 [817 kB] Get: 2 http://deb.debian.org/debian unstable/main amd64 libexpat1 amd64 2.6.2-1 [103 kB] Get: 3 http://deb.debian.org/debian unstable/main amd64 python3.11-minimal amd64 3.11.9-1 [1879 kB] Get: 4 http://deb.debian.org/debian unstable/main amd64 python3-minimal amd64 3.11.8-1 [26.3 kB] Get: 5 http://deb.debian.org/debian unstable/main amd64 media-types all 10.1.0 [26.9 kB] Get: 6 http://deb.debian.org/debian unstable/main amd64 netbase all 6.4 [12.8 kB] Get: 7 http://deb.debian.org/debian unstable/main amd64 tzdata all 2024a-4 [255 kB] Get: 8 http://deb.debian.org/debian unstable/main amd64 readline-common all 8.2-4 [69.3 kB] Get: 9 http://deb.debian.org/debian unstable/main amd64 libreadline8t64 amd64 8.2-4 [167 kB] Get: 10 http://deb.debian.org/debian unstable/main amd64 libpython3.11-stdlib amd64 3.11.9-1 [1792 kB] Get: 11 http://deb.debian.org/debian unstable/main amd64 python3.11 amd64 3.11.9-1 [602 kB] Get: 12 http://deb.debian.org/debian unstable/main amd64 libpython3-stdlib amd64 3.11.8-1 [9332 B] Get: 13 http://deb.debian.org/debian unstable/main amd64 python3 amd64 3.11.8-1 [27.4 kB] Get: 14 http://deb.debian.org/debian unstable/main amd64 libpython3.12-minimal amd64 3.12.3-1 [809 kB] Get: 15 http://deb.debian.org/debian unstable/main amd64 python3.12-minimal amd64 3.12.3-1 [2139 kB] Get: 16 http://deb.debian.org/debian unstable/main amd64 libproc2-0 amd64 2:4.0.4-4 [64.6 kB] Get: 17 http://deb.debian.org/debian unstable/main amd64 procps amd64 2:4.0.4-4 [880 kB] Get: 18 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.22 [22.4 kB] Get: 19 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3 [314 kB] Get: 20 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3 [105 kB] Get: 21 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.45-3 [42.9 kB] Get: 22 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.21-14+b1 [161 kB] Get: 23 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b1 [68.8 kB] Get: 24 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-4 [1180 kB] Get: 25 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.40.1-8.1 [96.2 kB] Get: 26 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.7-2 [38.0 kB] Get: 27 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.12.1-2 [1411 kB] Get: 28 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.19-4 [287 kB] Get: 29 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.71-3 [332 kB] Get: 30 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 31 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 32 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.21-14 [496 kB] Get: 33 http://deb.debian.org/debian unstable/main amd64 chrpath amd64 0.16-2+b1 [17.1 kB] Get: 34 http://deb.debian.org/debian unstable/main amd64 libicu72 amd64 72.1-4+b1 [9395 kB] Get: 35 http://deb.debian.org/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg-3 [670 kB] Get: 36 http://deb.debian.org/debian unstable/main amd64 libarchive13t64 amd64 3.7.2-2.1 [346 kB] Get: 37 http://deb.debian.org/debian unstable/main amd64 libbrotli1 amd64 1.1.0-2+b3 [305 kB] Get: 38 http://deb.debian.org/debian unstable/main amd64 libkrb5support0 amd64 1.20.1-6+b1 [33.3 kB] Get: 39 http://deb.debian.org/debian unstable/main amd64 libcom-err2 amd64 1.47.1-1 [22.9 kB] Get: 40 http://deb.debian.org/debian unstable/main amd64 libk5crypto3 amd64 1.20.1-6+b1 [79.8 kB] Get: 41 http://deb.debian.org/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-3 [8952 B] Get: 42 http://deb.debian.org/debian unstable/main amd64 libkrb5-3 amd64 1.20.1-6+b1 [333 kB] Get: 43 http://deb.debian.org/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.20.1-6+b1 [135 kB] Get: 44 http://deb.debian.org/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-6 [19.5 kB] Get: 45 http://deb.debian.org/debian unstable/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-6 [56.9 kB] Get: 46 http://deb.debian.org/debian unstable/main amd64 libldap-2.5-0 amd64 2.5.17+dfsg-1 [186 kB] Get: 47 http://deb.debian.org/debian unstable/main amd64 libnghttp2-14 amd64 1.61.0-1+b1 [75.6 kB] Get: 48 http://deb.debian.org/debian unstable/main amd64 libpsl5t64 amd64 0.21.2-1.1 [56.8 kB] Get: 49 http://deb.debian.org/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b4 [58.5 kB] Get: 50 http://deb.debian.org/debian unstable/main amd64 libssh2-1t64 amd64 1.11.0-5 [215 kB] Get: 51 http://deb.debian.org/debian unstable/main amd64 libcurl4t64 amd64 8.8.0-1 [441 kB] Get: 52 http://deb.debian.org/debian unstable/main amd64 libjsoncpp25 amd64 1.9.5-6+b2 [81.9 kB] Get: 53 http://deb.debian.org/debian unstable/main amd64 librhash0 amd64 1.4.3-3+b1 [132 kB] Get: 54 http://deb.debian.org/debian unstable/main amd64 libuv1t64 amd64 1.48.0-4 [148 kB] Get: 55 http://deb.debian.org/debian unstable/main amd64 cmake-data all 3.29.4-1 [2167 kB] Get: 56 http://deb.debian.org/debian unstable/main amd64 cmake amd64 3.29.4-1 [10.7 MB] Get: 57 http://deb.debian.org/debian unstable/main amd64 cython3 amd64 3.0.10+dfsg-5 [3571 kB] Get: 58 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.15.3 [88.0 kB] Get: 59 http://deb.debian.org/debian unstable/main amd64 libtool all 2.4.7-7 [517 kB] Get: 60 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 61 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 62 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 63 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 64 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.191-1+b1 [189 kB] Get: 65 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 66 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.21-14+b1 [1301 kB] Get: 67 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 68 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 69 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.15.3 [901 kB] Get: 70 http://deb.debian.org/debian unstable/main amd64 python3-pkg-resources all 68.1.2-2 [241 kB] Get: 71 http://deb.debian.org/debian unstable/main amd64 python3-lib2to3 all 3.12.3-3.1 [77.7 kB] Get: 72 http://deb.debian.org/debian unstable/main amd64 python3-distutils all 3.12.3-3.1 [131 kB] Get: 73 http://deb.debian.org/debian unstable/main amd64 python3-setuptools all 68.1.2-2 [468 kB] Get: 74 http://deb.debian.org/debian unstable/main amd64 dh-python all 6.20240422 [107 kB] Get: 75 http://deb.debian.org/debian unstable/main amd64 libbsd0 amd64 0.12.2-1 [131 kB] Get: 76 http://deb.debian.org/debian unstable/main amd64 libedit2 amd64 3.1-20240517-1 [93.3 kB] Get: 77 http://deb.debian.org/debian unstable/main amd64 libz3-4 amd64 4.8.12-3.1+b2 [7346 kB] Get: 78 http://deb.debian.org/debian unstable/main amd64 libllvm16t64 amd64 1:16.0.6-27 [23.1 MB] Get: 79 http://deb.debian.org/debian unstable/main amd64 libclang-cpp16t64 amd64 1:16.0.6-27 [11.5 MB] Get: 80 http://deb.debian.org/debian unstable/main amd64 libclang1-16t64 amd64 1:16.0.6-27 [6581 kB] Get: 81 http://deb.debian.org/debian unstable/main amd64 libfmt9 amd64 9.1.0+ds1-2 [113 kB] Get: 82 http://deb.debian.org/debian unstable/main amd64 doxygen amd64 1.9.8+ds-2+b1 [4913 kB] Get: 83 http://deb.debian.org/debian unstable/main amd64 libblas3 amd64 3.12.0-3 [148 kB] Get: 84 http://deb.debian.org/debian unstable/main amd64 libexpat1-dev amd64 2.6.2-1 [155 kB] Get: 85 http://deb.debian.org/debian unstable/main amd64 libgfortran5 amd64 14.1.0-1 [836 kB] Get: 86 http://deb.debian.org/debian unstable/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 87 http://deb.debian.org/debian unstable/main amd64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 88 http://deb.debian.org/debian unstable/main amd64 libjs-sphinxdoc all 7.2.6-8 [150 kB] Get: 89 http://deb.debian.org/debian unstable/main amd64 liblapack3 amd64 3.12.0-3 [2407 kB] Get: 90 http://deb.debian.org/debian unstable/main amd64 liblbfgsb0 amd64 3.0+dfsg.4-1+b1 [29.1 kB] Get: 91 http://deb.debian.org/debian unstable/main amd64 libpython3.11t64 amd64 3.11.9-1 [1960 kB] Get: 92 http://deb.debian.org/debian unstable/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1 [919 kB] Get: 93 http://deb.debian.org/debian unstable/main amd64 libpython3.11-dev amd64 3.11.9-1 [4513 kB] Get: 94 http://deb.debian.org/debian unstable/main amd64 libpython3-dev amd64 3.11.8-1 [9560 B] Get: 95 http://deb.debian.org/debian unstable/main amd64 libpython3.12-stdlib amd64 3.12.3-1 [1951 kB] Get: 96 http://deb.debian.org/debian unstable/main amd64 libpython3.12t64 amd64 3.12.3-1 [2107 kB] Get: 97 http://deb.debian.org/debian unstable/main amd64 libpython3.12-dev amd64 3.12.3-1 [5069 kB] Get: 98 http://deb.debian.org/debian unstable/main amd64 libpython3-all-dev amd64 3.11.8-1 [1072 B] Get: 99 http://deb.debian.org/debian unstable/main amd64 libsimde-dev all 0.8.2-1 [465 kB] Get: 100 http://deb.debian.org/debian unstable/main amd64 ocl-icd-libopencl1 amd64 2.3.2-1+b1 [40.3 kB] Get: 101 http://deb.debian.org/debian unstable/main amd64 opencl-c-headers all 3.0~2024.05.08-1 [46.1 kB] Get: 102 http://deb.debian.org/debian unstable/main amd64 opencl-clhpp-headers all 3.0~2023.12.14-1 [49.5 kB] Get: 103 http://deb.debian.org/debian unstable/main amd64 ocl-icd-opencl-dev amd64 2.3.2-1+b1 [8676 B] Get: 104 http://deb.debian.org/debian unstable/main amd64 python3.12 amd64 3.12.3-1 [659 kB] Get: 105 http://deb.debian.org/debian unstable/main amd64 python3-all amd64 3.11.8-1 [1056 B] Get: 106 http://deb.debian.org/debian unstable/main amd64 python3.11-dev amd64 3.11.9-1 [501 kB] Get: 107 http://deb.debian.org/debian unstable/main amd64 python3-dev amd64 3.11.8-1 [26.1 kB] Get: 108 http://deb.debian.org/debian unstable/main amd64 python3.12-dev amd64 3.12.3-1 [499 kB] Get: 109 http://deb.debian.org/debian unstable/main amd64 python3-all-dev amd64 3.11.8-1 [1072 B] Get: 110 http://deb.debian.org/debian unstable/main amd64 python3-decorator all 5.1.1-5 [15.1 kB] Get: 111 http://deb.debian.org/debian unstable/main amd64 python3-execnet all 2.1.1-1 [40.2 kB] Get: 112 http://deb.debian.org/debian unstable/main amd64 python3-iniconfig all 1.1.1-2 [6396 B] Get: 113 http://deb.debian.org/debian unstable/main amd64 python3-numpy amd64 1:1.26.4+ds-10 [5465 kB] Get: 114 http://deb.debian.org/debian unstable/main amd64 python3-packaging all 24.0-1 [45.5 kB] Get: 115 http://deb.debian.org/debian unstable/main amd64 python3-pluggy all 1.5.0-1 [26.9 kB] Get: 116 http://deb.debian.org/debian unstable/main amd64 python3-pytest all 8.2.2-1 [248 kB] Get: 117 http://deb.debian.org/debian unstable/main amd64 python3-pytest-xdist all 3.6.1-1 [44.4 kB] Get: 118 http://deb.debian.org/debian unstable/main amd64 python3-scipy amd64 1.12.0-2 [21.0 MB] Get: 119 http://deb.debian.org/debian unstable/main amd64 swig amd64 4.2.1-1 [1437 kB] Fetched 154 MB in 3s (44.9 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.11-minimal:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19716 files and directories currently installed.) Preparing to unpack .../libpython3.11-minimal_3.11.9-1_amd64.deb ... Unpacking libpython3.11-minimal:amd64 (3.11.9-1) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../libexpat1_2.6.2-1_amd64.deb ... Unpacking libexpat1:amd64 (2.6.2-1) ... Selecting previously unselected package python3.11-minimal. 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Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.2-4) ... Selecting previously unselected package libpython3.11-stdlib:amd64. Preparing to unpack .../6-libpython3.11-stdlib_3.11.9-1_amd64.deb ... Unpacking libpython3.11-stdlib:amd64 (3.11.9-1) ... Selecting previously unselected package python3.11. Preparing to unpack .../7-python3.11_3.11.9-1_amd64.deb ... Unpacking python3.11 (3.11.9-1) ... Selecting previously unselected package libpython3-stdlib:amd64. 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Unpacking python3-numpy (1:1.26.4+ds-10) ... Selecting previously unselected package python3-packaging. Preparing to unpack .../101-python3-packaging_24.0-1_all.deb ... Unpacking python3-packaging (24.0-1) ... Selecting previously unselected package python3-pluggy. Preparing to unpack .../102-python3-pluggy_1.5.0-1_all.deb ... Unpacking python3-pluggy (1.5.0-1) ... Selecting previously unselected package python3-pytest. Preparing to unpack .../103-python3-pytest_8.2.2-1_all.deb ... Unpacking python3-pytest (8.2.2-1) ... Selecting previously unselected package python3-pytest-xdist. Preparing to unpack .../104-python3-pytest-xdist_3.6.1-1_all.deb ... Unpacking python3-pytest-xdist (3.6.1-1) ... Selecting previously unselected package python3-scipy. Preparing to unpack .../105-python3-scipy_1.12.0-2_amd64.deb ... Unpacking python3-scipy (1.12.0-2) ... Selecting previously unselected package swig. Preparing to unpack .../106-swig_4.2.1-1_amd64.deb ... Unpacking swig (4.2.1-1) ... Setting up media-types (10.1.0) ... Setting up libpipeline1:amd64 (1.5.7-2) ... Setting up libsimde-dev (0.8.2-1) ... Setting up libkeyutils1:amd64 (1.6.3-3) ... Setting up swig (4.2.1-1) ... Setting up libicu72:amd64 (72.1-4+b1) ... Setting up bsdextrautils (2.40.1-8.1) ... Setting up libmagic-mgc (1:5.45-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.15.3) ... Setting up libbrotli1:amd64 (1.1.0-2+b3) ... Setting up libuv1t64:amd64 (1.48.0-4) ... Setting up libmagic1t64:amd64 (1:5.45-3) ... Setting up libpython3.12-minimal:amd64 (3.12.3-1) ... Setting up libpsl5t64:amd64 (0.21.2-1.1) ... Setting up libnghttp2-14:amd64 (1.61.0-1+b1) ... Setting up gettext-base (0.21-14+b1) ... Setting up m4 (1.4.19-4) ... Setting up libcom-err2:amd64 (1.47.1-1) ... Setting up file (1:5.45-3) ... Setting up libelf1t64:amd64 (0.191-1+b1) ... Setting up libkrb5support0:amd64 (1.20.1-6+b1) ... Setting up libsasl2-modules-db:amd64 (2.1.28+dfsg1-6) ... Setting up tzdata (2024a-4) ... Current default time zone: 'Etc/UTC' Local time is now: Thu Jun 6 16:52:37 UTC 2024. Universal Time is now: Thu Jun 6 16:52:37 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20220109.1) ... Setting up libz3-4:amd64 (4.8.12-3.1+b2) ... Setting up libblas3:amd64 (3.12.0-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libexpat1-dev:amd64 (2.6.2-1) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b4) ... Setting up libproc2-0:amd64 (2:4.0.4-4) ... Setting up autopoint (0.21-14) ... Setting up libjsoncpp25:amd64 (1.9.5-6+b2) ... Setting up libk5crypto3:amd64 (1.20.1-6+b1) ... Setting up opencl-c-headers (3.0~2024.05.08-1) ... Setting up libsasl2-2:amd64 (2.1.28+dfsg1-6) ... Setting up libgfortran5:amd64 (14.1.0-1) ... Setting up autoconf (2.71-3) ... Setting up libfmt9:amd64 (9.1.0+ds1-2) ... Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.22) ... Setting up ocl-icd-libopencl1:amd64 (2.3.2-1+b1) ... Setting up librhash0:amd64 (1.4.3-3+b1) ... Setting up libuchardet0:amd64 (0.0.8-1+b1) ... Setting up procps (2:4.0.4-4) ... Setting up netbase (6.4) ... Setting up cmake-data (3.29.4-1) ... Setting up libkrb5-3:amd64 (1.20.1-6+b1) ... Setting up libssh2-1t64:amd64 (1.11.0-5) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up libbsd0:amd64 (0.12.2-1) ... Setting up readline-common (8.2-4) ... Setting up libxml2:amd64 (2.12.7+dfsg-3) ... Setting up chrpath (0.16-2+b1) ... Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up python3.12-minimal (3.12.3-1) ... Setting up liblapack3:amd64 (3.12.0-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up gettext (0.21-14+b1) ... Setting up libtool (2.4.7-7) ... Setting up libedit2:amd64 (3.1-20240517-1) ... Setting up libldap-2.5-0:amd64 (2.5.17+dfsg-1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libllvm16t64:amd64 (1:16.0.6-27) ... Setting up dh-autoreconf (20) ... Setting up opencl-clhpp-headers (3.0~2023.12.14-1) ... Setting up libgssapi-krb5-2:amd64 (1.20.1-6+b1) ... Setting up libjs-sphinxdoc (7.2.6-8) ... Setting up ocl-icd-opencl-dev:amd64 (2.3.2-1+b1) ... Setting up libreadline8t64:amd64 (8.2-4) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-4) ... Setting up libarchive13t64:amd64 (3.7.2-2.1) ... Setting up liblbfgsb0:amd64 (3.0+dfsg.4-1+b1) ... Setting up libpython3.12-stdlib:amd64 (3.12.3-1) ... Setting up libcurl4t64:amd64 (8.8.0-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpython3.11-stdlib:amd64 (3.11.9-1) ... Setting up python3.12 (3.12.3-1) ... Setting up libpython3.11t64:amd64 (3.11.9-1) ... Setting up libclang1-16t64 (1:16.0.6-27) ... Setting up man-db (2.12.1-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libclang-cpp16t64 (1:16.0.6-27) ... Setting up libpython3.12t64:amd64 (3.12.3-1) ... Setting up doxygen (1.9.8+ds-2+b1) ... Setting up libpython3.11-dev:amd64 (3.11.9-1) ... Setting up cmake (3.29.4-1) ... Setting up libpython3-stdlib:amd64 (3.11.8-1) ... Setting up python3.11 (3.11.9-1) ... Setting up libpython3-dev:amd64 (3.11.8-1) ... Setting up python3.11-dev (3.11.9-1) ... Setting up debhelper (13.15.3) ... Setting up python3 (3.11.8-1) ... Setting up libpython3.12-dev:amd64 (3.12.3-1) ... Setting up python3-decorator (5.1.1-5) ... Setting up python3-packaging (24.0-1) ... Setting up libpython3-all-dev:amd64 (3.11.8-1) ... Setting up python3.12-dev (3.12.3-1) ... Setting up cython3 (3.0.10+dfsg-5) ... Setting up python3-pluggy (1.5.0-1) ... Setting up python3-execnet (2.1.1-1) ... Setting up python3-lib2to3 (3.12.3-3.1) ... Setting up python3-pkg-resources (68.1.2-2) ... Setting up python3-distutils (3.12.3-3.1) ... python3.12: can't get files for byte-compilation Setting up python3-iniconfig (1.1.1-2) ... Setting up python3-setuptools (68.1.2-2) ... Setting up python3-pytest (8.2.2-1) ... Setting up python3-all (3.11.8-1) ... Setting up python3-dev (3.11.8-1) ... Setting up python3-numpy (1:1.26.4+ds-10) ... Setting up dh-python (6.20240422) ... Setting up python3-all-dev (3.11.8-1) ... Setting up python3-scipy (1.12.0-2) ... Setting up python3-pytest-xdist (3.6.1-1) ... Processing triggers for libc-bin (2.38-12.1) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/openmm-8.1.1+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../openmm_8.1.1+dfsg-1_source.changes dpkg-buildpackage: info: source package openmm dpkg-buildpackage: info: source version 8.1.1+dfsg-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andrius Merkys dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --buildsystem cmake --with numpy3,python3 dh_auto_clean -O--buildsystem=cmake debian/rules execute_after_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg' rm -rf .pybuild make[1]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg' dh_autoreconf_clean -O--buildsystem=cmake dh_clean -O--buildsystem=cmake debian/rules binary dh binary --buildsystem cmake --with numpy3,python3 dh_update_autotools_config -O--buildsystem=cmake dh_autoreconf -O--buildsystem=cmake debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg' dh_auto_configure -- -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_C_FLAGS_RELEASE="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP" -DCMAKE_CXX_FLAGS_RELEASE="-g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP" -DCMAKE_SHARED_LINKER_FLAGS_RELEASE="-Wl,-z,relro -Wl,--as-needed" -DCMAKE_BUILD_RPATH_USE_ORIGIN=ON -DCMAKE_BUILD_TYPE=Release -DOPENMM_BUILD_SERIALIZATION_SUPPORT=ON -DOPENMM_BUILD_C_AND_FORTRAN_WRAPPERS=OFF -DOPENMM_BUILD_OPENCL_TESTS=OFF cd obj-x86_64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -DCMAKE_VERBOSE_MAKEFILE=ON "-DCMAKE_C_FLAGS_RELEASE=-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP" "-DCMAKE_CXX_FLAGS_RELEASE=-g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP" "-DCMAKE_SHARED_LINKER_FLAGS_RELEASE=-Wl,-z,relro -Wl,--as-needed" -DCMAKE_BUILD_RPATH_USE_ORIGIN=ON -DCMAKE_BUILD_TYPE=Release -DOPENMM_BUILD_SERIALIZATION_SUPPORT=ON -DOPENMM_BUILD_C_AND_FORTRAN_WRAPPERS=OFF -DOPENMM_BUILD_OPENCL_TESTS=OFF .. CMake Warning (dev) at CMakeLists.txt:15 (find_package): Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules are removed. Run "cmake --help-policy CMP0148" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. -- Found PythonInterp: /usr/bin/python3 (found version "3.11.9") CMake Warning (dev) at CMakeLists.txt:21 (PROJECT): cmake_minimum_required() should be called prior to this top-level project() call. Please see the cmake-commands(7) manual for usage documentation of both commands. This warning is for project developers. Use -Wno-dev to suppress it. -- The C compiler identification is GNU 13.2.0 -- The CXX compiler identification is GNU 13.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done CMake Deprecation Warning at CMakeLists.txt:25 (CMAKE_POLICY): The OLD behavior for policy CMP0042 will be removed from a future version of CMake. The cmake-policies(7) manual explains that the OLD behaviors of all policies are deprecated and that a policy should be set to OLD only under specific short-term circumstances. Projects should be ported to the NEW behavior and not rely on setting a policy to OLD. CMake Warning (dev) at CMakeLists.txt:30 (INCLUDE): Policy CMP0145 is not set: The Dart and FindDart modules are removed. Run "cmake --help-policy CMP0145" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at /usr/share/cmake-3.29/Modules/Dart.cmake:47 (message): Policy CMP0145 is not set: The Dart and FindDart modules are removed. Run "cmake --help-policy CMP0145" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): CMakeLists.txt:30 (INCLUDE) This warning is for project developers. Use -Wno-dev to suppress it. -- Found Doxygen: /usr/bin/doxygen (found version "1.9.8") found components: doxygen missing components: dot -- Configuring done (3.0s) -- Generating done (0.6s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR FETCHCONTENT_FULLY_DISCONNECTED OPENMM_BUILD_SERIALIZATION_SUPPORT -- Build files have been written to: /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu make[1]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg' dh_auto_build -O--buildsystem=cmake cd obj-x86_64-linux-gnu && make -j20 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/openmm-8.1.1+dfsg -B/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/CMakeFiles /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f CMakeFiles/OpenMM.dir/build.make CMakeFiles/OpenMM.dir/depend make -f platforms/common/CMakeFiles/CommonKernels.dir/build.make platforms/common/CMakeFiles/CommonKernels.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/common /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/common /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/common/CMakeFiles/CommonKernels.dir/DependInfo.cmake "--color=" make -f plugins/amoeba/platforms/common/CMakeFiles/AmoebaCommonKernels.dir/build.make plugins/amoeba/platforms/common/CMakeFiles/AmoebaCommonKernels.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/CMakeFiles/OpenMM.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/common /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/common /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/common/CMakeFiles/AmoebaCommonKernels.dir/DependInfo.cmake "--color=" make -f plugins/rpmd/platforms/common/CMakeFiles/RpmdCommonKernels.dir/build.make plugins/rpmd/platforms/common/CMakeFiles/RpmdCommonKernels.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/common /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/common /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/common/CMakeFiles/RpmdCommonKernels.dir/DependInfo.cmake "--color=" make -f plugins/drude/platforms/common/CMakeFiles/DrudeCommonKernels.dir/build.make plugins/drude/platforms/common/CMakeFiles/DrudeCommonKernels.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f wrappers/python/CMakeFiles/BuildModule.dir/build.make wrappers/python/CMakeFiles/BuildModule.dir/depend cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/common /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/common /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/common/CMakeFiles/DrudeCommonKernels.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python/CMakeFiles/BuildModule.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f CMakeFiles/OpenMM.dir/build.make CMakeFiles/OpenMM.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/common/CMakeFiles/CommonKernels.dir/build.make platforms/common/CMakeFiles/CommonKernels.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/amoeba/platforms/common/CMakeFiles/AmoebaCommonKernels.dir/build.make plugins/amoeba/platforms/common/CMakeFiles/AmoebaCommonKernels.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/rpmd/platforms/common/CMakeFiles/RpmdCommonKernels.dir/build.make plugins/rpmd/platforms/common/CMakeFiles/RpmdCommonKernels.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f wrappers/python/CMakeFiles/BuildModule.dir/build.make wrappers/python/CMakeFiles/BuildModule.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/drude/platforms/common/CMakeFiles/DrudeCommonKernels.dir/build.make plugins/drude/platforms/common/CMakeFiles/DrudeCommonKernels.dir/build [ 0%] Generating src/CommonAmoebaKernelSources.cpp, src/CommonAmoebaKernelSources.h make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/common && /usr/bin/cmake -D KERNEL_SOURCE_DIR=/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/common/src -D KERNELS_CPP=/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/common/src/CommonAmoebaKernelSources.cpp -D KERNELS_H=/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/common/src/CommonAmoebaKernelSources.h -D KERNEL_SOURCE_CLASS=CommonAmoebaKernelSources -D KERNEL_FILE_EXTENSION=cc -P /build/reproducible-path/openmm-8.1.1+dfsg/cmake_modules/EncodeKernelFiles.cmake make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 0%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/ATMForce.cpp.o [ 0%] Generating src/CommonKernelSources.cpp, src/CommonKernelSources.h [ 0%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/AndersenThermostat.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/ATMForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/ATMForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/ATMForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/ATMForce.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/common && /usr/bin/cmake -D KERNEL_SOURCE_DIR=/build/reproducible-path/openmm-8.1.1+dfsg/platforms/common/src -D KERNELS_CPP=/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/common/src/CommonKernelSources.cpp -D KERNELS_H=/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/common/src/CommonKernelSources.h -D KERNEL_SOURCE_CLASS=CommonKernelSources -D KERNEL_FILE_EXTENSION=cc -P /build/reproducible-path/openmm-8.1.1+dfsg/cmake_modules/EncodeKernelFiles.cmake [ 0%] Generating src/CommonRpmdKernelSources.cpp, src/CommonRpmdKernelSources.h /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/AndersenThermostat.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/AndersenThermostat.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/AndersenThermostat.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/AndersenThermostat.cpp [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/MANIFEST.in to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/MANIFEST.in [ 0%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/AssertionUtilities.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/common && /usr/bin/cmake -D KERNEL_SOURCE_DIR=/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/common/src -D KERNELS_CPP=/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/common/src/CommonRpmdKernelSources.cpp -D KERNELS_H=/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/common/src/CommonRpmdKernelSources.h -D KERNEL_SOURCE_CLASS=CommonRpmdKernelSources -D KERNEL_FILE_EXTENSION=cc -P /build/reproducible-path/openmm-8.1.1+dfsg/cmake_modules/EncodeKernelFiles.cmake [ 0%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/ATMForceImpl.cpp.o [ 0%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CMAPTorsionForceImpl.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/MANIFEST.in /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/MANIFEST.in [ 0%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/AndersenThermostatImpl.cpp.o [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/__init__.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/__init__.py [ 0%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CMAPTorsionForce.cpp.o [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/amd.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/amd.py [ 0%] Generating src/CommonDrudeKernelSources.cpp, src/CommonDrudeKernelSources.h /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/ATMForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/ATMForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/ATMForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/ATMForceImpl.cpp [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/__init__.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/__init__.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/common && /usr/bin/cmake -D KERNEL_SOURCE_DIR=/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/common/src -D KERNELS_CPP=/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/common/src/CommonDrudeKernelSources.cpp -D KERNELS_H=/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/common/src/CommonDrudeKernelSources.h -D KERNEL_SOURCE_CLASS=CommonDrudeKernelSources -D KERNEL_FILE_EXTENSION=cc -P /build/reproducible-path/openmm-8.1.1+dfsg/cmake_modules/EncodeKernelFiles.cmake [ 0%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/BrownianIntegrator.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/AndersenThermostatImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/AndersenThermostatImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/AndersenThermostatImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/AndersenThermostatImpl.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/__init__.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/__init__.py /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/AssertionUtilities.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/AssertionUtilities.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/AssertionUtilities.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/AssertionUtilities.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/amd.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/amd.py [ 0%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CMMotionRemover.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/__init__.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/__init__.py /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/BrownianIntegrator.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/BrownianIntegrator.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/BrownianIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/BrownianIntegrator.cpp /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CMAPTorsionForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CMAPTorsionForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CMAPTorsionForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CMAPTorsionForce.cpp [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/amberinpcrdfile.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/amberinpcrdfile.py /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CMAPTorsionForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CMAPTorsionForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CMAPTorsionForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CMAPTorsionForceImpl.cpp [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/amberprmtopfile.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/amberprmtopfile.py /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CMMotionRemover.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CMMotionRemover.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CMMotionRemover.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CMMotionRemover.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/amberinpcrdfile.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/amberinpcrdfile.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/amberprmtopfile.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/amberprmtopfile.py make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/charmmcrdfiles.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/charmmcrdfiles.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/charmmcrdfiles.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/charmmcrdfiles.py [ 0%] Built target RpmdCommonKernels [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/charmmparameterset.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/charmmparameterset.py make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 0%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CMMotionRemoverImpl.cpp.o [ 0%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CompiledExpressionSet.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/charmmparameterset.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/charmmparameterset.py make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CMMotionRemoverImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CMMotionRemoverImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CMMotionRemoverImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CMMotionRemoverImpl.cpp [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/charmmpsffile.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/charmmpsffile.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/charmmpsffile.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/charmmpsffile.py [ 0%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CompoundIntegrator.cpp.o make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CompiledExpressionSet.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CompiledExpressionSet.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CompiledExpressionSet.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CompiledExpressionSet.cpp [ 0%] Built target CommonKernels /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CompoundIntegrator.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CompoundIntegrator.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CompoundIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CompoundIntegrator.cpp [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/checkpointreporter.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/checkpointreporter.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/checkpointreporter.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/checkpointreporter.py [ 0%] Built target DrudeCommonKernels [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/DLPC.pdb to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/DLPC.pdb [ 0%] Built target AmoebaCommonKernels cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/DLPC.pdb /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/DLPC.pdb [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/DLPE.pdb to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/DLPE.pdb [ 0%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/Context.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/DLPE.pdb /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/DLPE.pdb /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/Context.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/Context.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/Context.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/Context.cpp [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/DPPC.pdb to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/DPPC.pdb [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/DOPC.pdb to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/DOPC.pdb cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/DPPC.pdb /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/DPPC.pdb cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/DOPC.pdb /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/DOPC.pdb [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/DMPC.pdb to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/DMPC.pdb cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/DMPC.pdb /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/DMPC.pdb [ 0%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/ContextImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/ContextImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/ContextImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/ContextImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/ContextImpl.cpp [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/POPC.pdb to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/POPC.pdb cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/POPC.pdb /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/POPC.pdb [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/POPE.pdb to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/POPE.pdb cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/POPE.pdb /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/POPE.pdb [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/absinth.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/absinth.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/absinth.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/absinth.xml [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber03_obc.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber03_obc.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber03_obc.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber03_obc.xml [ 0%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber10.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber10.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber10.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber10.xml [ 2%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomAngleForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomAngleForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomAngleForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomAngleForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CustomAngleForce.cpp [ 4%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber03.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber03.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber03.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber03.xml [ 4%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber10_obc.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber10_obc.xml [ 4%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14-all.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14-all.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14-all.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14-all.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber10_obc.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber10_obc.xml [ 4%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomAngleForceImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomAngleForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomAngleForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomAngleForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CustomAngleForceImpl.cpp [ 4%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/DNA.OL15.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/DNA.OL15.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/DNA.OL15.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/DNA.OL15.xml [ 4%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/GLYCAM_06j-1.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/GLYCAM_06j-1.xml [ 4%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/DNA.bsc1.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/DNA.bsc1.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/GLYCAM_06j-1.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/GLYCAM_06j-1.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/DNA.bsc1.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/DNA.bsc1.xml [ 4%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/RNA.OL3.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/RNA.OL3.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/RNA.OL3.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/RNA.OL3.xml [ 4%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/lipid17.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/lipid17.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/lipid17.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/lipid17.xml [ 4%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/opc.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/opc.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/opc.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/opc.xml [ 4%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/opc3.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/opc3.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/opc3.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/opc3.xml [ 4%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomBondForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomBondForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomBondForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomBondForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CustomBondForce.cpp [ 4%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/protein.ff14SB.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/protein.ff14SB.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/protein.ff14SB.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/protein.ff14SB.xml [ 4%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomBondForceImpl.cpp.o [ 4%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/protein.ff15ipq.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/protein.ff15ipq.xml /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomBondForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomBondForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomBondForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CustomBondForceImpl.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/protein.ff15ipq.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/protein.ff15ipq.xml [ 4%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/spce.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/spce.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/spce.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/spce.xml [ 4%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/tip3p.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/tip3p.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/tip3p.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/tip3p.xml [ 4%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/tip3pfb.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/tip3pfb.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/tip3pfb.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/tip3pfb.xml [ 4%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/tip4pew.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/tip4pew.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/tip4pew.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/tip4pew.xml [ 4%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/tip4pfb.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/tip4pfb.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber14/tip4pfb.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber14/tip4pfb.xml [ 4%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber96.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber96.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber96.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber96.xml [ 4%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomCPPForceImpl.cpp.o [ 6%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber96_obc.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber96_obc.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber96_obc.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber96_obc.xml /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomCPPForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomCPPForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomCPPForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CustomCPPForceImpl.cpp [ 6%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber99Test.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber99Test.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber99Test.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber99Test.xml [ 6%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber99_obc.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber99_obc.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber99_obc.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber99_obc.xml [ 6%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber99sb.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber99sb.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber99sb.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber99sb.xml [ 6%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber99sbildn.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber99sbildn.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber99sbildn.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber99sbildn.xml [ 6%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber99sbnmr.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber99sbnmr.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amber99sbnmr.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amber99sbnmr.xml [ 6%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomCVForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomCVForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomCVForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomCVForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CustomCVForce.cpp [ 6%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amberfb15.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amberfb15.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amberfb15.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amberfb15.xml [ 6%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomCVForceImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomCVForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomCVForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomCVForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CustomCVForceImpl.cpp [ 6%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amoeba2009.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amoeba2009.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amoeba2009.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amoeba2009.xml [ 6%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amoeba2009_gk.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amoeba2009_gk.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amoeba2009_gk.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amoeba2009_gk.xml [ 6%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomCentroidBondForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomCentroidBondForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomCentroidBondForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomCentroidBondForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CustomCentroidBondForce.cpp [ 6%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amoeba2013.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amoeba2013.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amoeba2013.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amoeba2013.xml [ 6%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amoeba2013_gk.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amoeba2013_gk.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amoeba2013_gk.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amoeba2013_gk.xml [ 6%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amoeba2018.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amoeba2018.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amoeba2018.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amoeba2018.xml [ 6%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amoeba2018_gk.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amoeba2018_gk.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/amoeba2018_gk.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/amoeba2018_gk.xml [ 6%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/charmm36.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/charmm36.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36.xml [ 6%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/charmm36/spce.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36/spce.xml [ 6%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomCentroidBondForceImpl.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/charmm36/spce.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36/spce.xml /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomCentroidBondForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomCentroidBondForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomCentroidBondForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CustomCentroidBondForceImpl.cpp [ 6%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/charmm36/tip3p-pme-b.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36/tip3p-pme-b.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/charmm36/tip3p-pme-b.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36/tip3p-pme-b.xml [ 6%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/charmm36/tip3p-pme-f.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36/tip3p-pme-f.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/charmm36/tip3p-pme-f.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36/tip3p-pme-f.xml [ 6%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/charmm36/tip4p2005.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36/tip4p2005.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/charmm36/tip4p2005.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36/tip4p2005.xml [ 6%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomCompoundBondForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomCompoundBondForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomCompoundBondForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomCompoundBondForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CustomCompoundBondForce.cpp [ 6%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/charmm36/tip4pew.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36/tip4pew.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/charmm36/tip4pew.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36/tip4pew.xml [ 6%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomCompoundBondForceImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomCompoundBondForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomCompoundBondForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomCompoundBondForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CustomCompoundBondForceImpl.cpp [ 8%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/charmm36/tip5p.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36/tip5p.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/charmm36/tip5p.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36/tip5p.xml [ 8%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/charmm36/tip5pew.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36/tip5pew.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/charmm36/tip5pew.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36/tip5pew.xml [ 8%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/charmm36/water.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36/water.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/charmm36/water.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm36/water.xml [ 8%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/charmm_polar_2013.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm_polar_2013.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/charmm_polar_2013.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm_polar_2013.xml [ 8%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomExternalForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomExternalForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomExternalForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomExternalForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CustomExternalForce.cpp [ 8%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/charmm_polar_2019.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm_polar_2019.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/charmm_polar_2019.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/charmm_polar_2019.xml [ 8%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/glycam-hydrogens.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/glycam-hydrogens.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/glycam-hydrogens.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/glycam-hydrogens.xml [ 8%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/hydrogens.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/hydrogens.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/hydrogens.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/hydrogens.xml [ 8%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/iamoeba.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/iamoeba.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/iamoeba.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/iamoeba.xml [ 8%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/implicit/gbn.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/implicit/gbn.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/implicit/gbn.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/implicit/gbn.xml [ 8%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/implicit/gbn2.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/implicit/gbn2.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/implicit/gbn2.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/implicit/gbn2.xml [ 8%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomExternalForceImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomExternalForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomExternalForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomExternalForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CustomExternalForceImpl.cpp [ 8%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/implicit/hct.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/implicit/hct.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/implicit/hct.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/implicit/hct.xml [ 8%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomGBForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomGBForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomGBForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomGBForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CustomGBForce.cpp [ 8%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/implicit/obc1.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/implicit/obc1.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/implicit/obc1.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/implicit/obc1.xml [ 8%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/implicit/obc2.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/implicit/obc2.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/implicit/obc2.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/implicit/obc2.xml [ 8%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/opc.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/opc.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/opc.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/opc.xml [ 8%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomGBForceImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomGBForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomGBForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomGBForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CustomGBForceImpl.cpp [ 8%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/opc3.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/opc3.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/opc3.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/opc3.xml [ 8%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/pdbNames.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/pdbNames.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/pdbNames.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/pdbNames.xml [ 8%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomHbondForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomHbondForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomHbondForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomHbondForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CustomHbondForce.cpp [ 8%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/residues.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/residues.xml [ 8%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomHbondForceImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomHbondForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomHbondForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomHbondForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CustomHbondForceImpl.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/residues.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/residues.xml [ 8%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/spce.pdb to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/spce.pdb cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/spce.pdb /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/spce.pdb [ 8%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/spce.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/spce.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/spce.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/spce.xml [ 8%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomIntegrator.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomIntegrator.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomIntegrator.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CustomIntegrator.cpp [ 8%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/swm4ndp.pdb to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/swm4ndp.pdb cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/swm4ndp.pdb /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/swm4ndp.pdb [ 8%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomIntegratorUtilities.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomIntegratorUtilities.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomIntegratorUtilities.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomIntegratorUtilities.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CustomIntegratorUtilities.cpp [ 10%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomManyParticleForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomManyParticleForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomManyParticleForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomManyParticleForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CustomManyParticleForce.cpp [ 12%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/swm4ndp.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/swm4ndp.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/swm4ndp.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/swm4ndp.xml [ 12%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/test.pdb to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/test.pdb cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/test.pdb /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/test.pdb [ 12%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/tip3p.pdb to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/tip3p.pdb cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/tip3p.pdb /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/tip3p.pdb [ 12%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/tip3p.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/tip3p.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/tip3p.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/tip3p.xml [ 12%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/tip3pfb.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/tip3pfb.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/tip3pfb.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/tip3pfb.xml [ 12%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/tip4pew.pdb to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/tip4pew.pdb cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/tip4pew.pdb /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/tip4pew.pdb [ 12%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/tip4pew.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/tip4pew.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/tip4pew.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/tip4pew.xml [ 12%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/tip4pfb.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/tip4pfb.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/tip4pfb.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/tip4pfb.xml [ 12%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/tip5p.pdb to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/tip5p.pdb cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/tip5p.pdb /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/tip5p.pdb [ 12%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/tip5p.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/tip5p.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/data/tip5p.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/data/tip5p.xml [ 12%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/dcdfile.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/dcdfile.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/dcdfile.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/dcdfile.py [ 12%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomManyParticleForceImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomManyParticleForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomManyParticleForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomManyParticleForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CustomManyParticleForceImpl.cpp [ 12%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/dcdreporter.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/dcdreporter.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/dcdreporter.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/dcdreporter.py [ 12%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomNonbondedForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomNonbondedForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomNonbondedForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomNonbondedForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CustomNonbondedForce.cpp [ 12%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/desmonddmsfile.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/desmonddmsfile.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/desmonddmsfile.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/desmonddmsfile.py [ 12%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/element.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/element.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/element.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/element.py [ 12%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomNonbondedForceImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomNonbondedForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomNonbondedForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomNonbondedForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CustomNonbondedForceImpl.cpp [ 12%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/forcefield.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/forcefield.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/forcefield.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/forcefield.py [ 12%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/gromacsgrofile.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/gromacsgrofile.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/gromacsgrofile.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/gromacsgrofile.py [ 12%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/gromacstopfile.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/gromacstopfile.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/gromacstopfile.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/gromacstopfile.py [ 12%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/__init__.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/__init__.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/__init__.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/__init__.py [ 12%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/amber_file_parser.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/amber_file_parser.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/amber_file_parser.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/amber_file_parser.py [ 14%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/argtracker.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/argtracker.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/argtracker.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/argtracker.py [ 14%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/charmm/__init__.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/charmm/__init__.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/charmm/__init__.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/charmm/__init__.py [ 14%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomTorsionForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomTorsionForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomTorsionForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomTorsionForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CustomTorsionForce.cpp [ 14%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/CustomTorsionForceImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/CustomTorsionForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/CustomTorsionForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/CustomTorsionForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/CustomTorsionForceImpl.cpp [ 14%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/charmm/_charmmfile.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/charmm/_charmmfile.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/charmm/_charmmfile.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/charmm/_charmmfile.py [ 14%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/charmm/exceptions.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/charmm/exceptions.py [ 14%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/Force.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/charmm/exceptions.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/charmm/exceptions.py /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/Force.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/Force.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/Force.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/Force.cpp [ 14%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/charmm/topologyobjects.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/charmm/topologyobjects.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/charmm/topologyobjects.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/charmm/topologyobjects.py [ 14%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/compiled.pyx to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/compiled.pyx cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/compiled.pyx /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/compiled.pyx [ 14%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/customgbforces.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/customgbforces.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/customgbforces.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/customgbforces.py [ 14%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/pdbstructure.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbstructure.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/pdbstructure.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbstructure.py [ 14%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/pdbx/__init__.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/__init__.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/pdbx/__init__.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/__init__.py [ 14%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/ForceImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/ForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/ForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/ForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/ForceImpl.cpp [ 14%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/pdbx/reader/PdbxContainers.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/reader/PdbxContainers.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/pdbx/reader/PdbxContainers.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/reader/PdbxContainers.py [ 14%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/pdbx/reader/PdbxParser.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/reader/PdbxParser.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/pdbx/reader/PdbxParser.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/reader/PdbxParser.py [ 14%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/pdbx/reader/PdbxReadWriteTests.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/reader/PdbxReadWriteTests.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/pdbx/reader/PdbxReadWriteTests.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/reader/PdbxReadWriteTests.py [ 14%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/pdbx/reader/PdbxReader.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/reader/PdbxReader.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/pdbx/reader/PdbxReader.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/reader/PdbxReader.py [ 14%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/pdbx/reader/PdbxReaderTests.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/reader/PdbxReaderTests.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/pdbx/reader/PdbxReaderTests.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/reader/PdbxReaderTests.py [ 14%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/pdbx/reader/__init__.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/reader/__init__.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/pdbx/reader/__init__.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/reader/__init__.py [ 14%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/pdbx/writer/PdbxWriter.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/writer/PdbxWriter.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/pdbx/writer/PdbxWriter.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/writer/PdbxWriter.py [ 14%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/pdbx/writer/PdbxWriterTests.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/writer/PdbxWriterTests.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/pdbx/writer/PdbxWriterTests.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/writer/PdbxWriterTests.py [ 14%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/GBSAOBCForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/GBSAOBCForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/GBSAOBCForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/GBSAOBCForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/GBSAOBCForce.cpp [ 14%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/pdbx/writer/__init__.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/writer/__init__.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/pdbx/writer/__init__.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/pdbx/writer/__init__.py [ 14%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/singleton.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/singleton.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/singleton.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/singleton.py [ 14%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/unitcell.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/unitcell.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/unitcell.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/unitcell.py [ 14%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/GBSAOBCForceImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/GBSAOBCForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/GBSAOBCForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/GBSAOBCForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/GBSAOBCForceImpl.cpp [ 14%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/GayBerneForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/GayBerneForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/GayBerneForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/GayBerneForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/GayBerneForce.cpp [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/xtc_utils/include/xdrfile.h to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/xtc_utils/include/xdrfile.h cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/xtc_utils/include/xdrfile.h /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/xtc_utils/include/xdrfile.h [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/xtc_utils/include/xdrfile_xtc.h to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/xtc_utils/include/xdrfile_xtc.h cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/xtc_utils/include/xdrfile_xtc.h /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/xtc_utils/include/xdrfile_xtc.h [ 16%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/GayBerneForceImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/GayBerneForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/GayBerneForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/GayBerneForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/GayBerneForceImpl.cpp [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/xtc_utils/include/xtc.h to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/xtc_utils/include/xtc.h cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/xtc_utils/include/xtc.h /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/xtc_utils/include/xtc.h [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/xtc_utils/src/xdrfile.cpp to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/xtc_utils/src/xdrfile.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/xtc_utils/src/xdrfile.cpp /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/xtc_utils/src/xdrfile.cpp [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/xtc_utils/src/xdrfile_xtc.cpp to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/xtc_utils/src/xdrfile_xtc.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/xtc_utils/src/xdrfile_xtc.cpp /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/xtc_utils/src/xdrfile_xtc.cpp [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/xtc_utils/src/xtc.cpp to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/xtc_utils/src/xtc.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/xtc_utils/src/xtc.cpp /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/xtc_utils/src/xtc.cpp [ 16%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/HarmonicAngleForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/HarmonicAngleForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/HarmonicAngleForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/HarmonicAngleForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/HarmonicAngleForce.cpp [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/xtc_utils/xtc.pyx to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/xtc_utils/xtc.pyx cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/xtc_utils/xtc.pyx /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/xtc_utils/xtc.pyx [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/xtc_utils/xtclib.pxd to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/xtc_utils/xtclib.pxd cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/internal/xtc_utils/xtclib.pxd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/xtc_utils/xtclib.pxd [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/metadynamics.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/metadynamics.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/metadynamics.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/metadynamics.py [ 16%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/HarmonicAngleForceImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/HarmonicAngleForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/HarmonicAngleForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/HarmonicAngleForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/HarmonicAngleForceImpl.cpp [ 16%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/HarmonicBondForce.cpp.o [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/modeller.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/modeller.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/modeller.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/modeller.py /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/HarmonicBondForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/HarmonicBondForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/HarmonicBondForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/HarmonicBondForce.cpp [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/pdbfile.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/pdbfile.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/pdbfile.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/pdbfile.py [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/pdbreporter.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/pdbreporter.py [ 16%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/HarmonicBondForceImpl.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/pdbreporter.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/pdbreporter.py /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/HarmonicBondForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/HarmonicBondForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/HarmonicBondForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/HarmonicBondForceImpl.cpp [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/pdbxfile.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/pdbxfile.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/pdbxfile.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/pdbxfile.py [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/simulatedtempering.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/simulatedtempering.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/simulatedtempering.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/simulatedtempering.py [ 16%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/Integrator.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/Integrator.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/Integrator.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/Integrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/Integrator.cpp [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/simulation.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/simulation.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/simulation.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/simulation.py [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/statedatareporter.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/statedatareporter.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/statedatareporter.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/statedatareporter.py [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/topology.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/topology.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/topology.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/topology.py [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/xtcfile.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/xtcfile.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/xtcfile.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/xtcfile.py [ 16%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/xtcreporter.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/xtcreporter.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/app/xtcreporter.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/xtcreporter.py [ 18%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/mtsintegrator.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/mtsintegrator.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/mtsintegrator.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/mtsintegrator.py [ 18%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/src/swig_doxygen/swig_lib/python/typemaps.i to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/swig_lib/python/typemaps.i cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/src/swig_doxygen/swig_lib/python/typemaps.i 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-I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/LangevinIntegrator.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/LangevinIntegrator.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/LangevinIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/LangevinIntegrator.cpp [ 18%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/src/swig_doxygen/OpenMM.i to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/OpenMM.i cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/src/swig_doxygen/OpenMM.i /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/OpenMM.i [ 18%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/LangevinMiddleIntegrator.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/LangevinMiddleIntegrator.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/LangevinMiddleIntegrator.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/LangevinMiddleIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/LangevinMiddleIntegrator.cpp [ 18%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/LocalEnergyMinimizer.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/LocalEnergyMinimizer.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/LocalEnergyMinimizer.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/LocalEnergyMinimizer.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/LocalEnergyMinimizer.cpp [ 18%] Parsing OpenMM header files with doxygen... cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python/src/swig_doxygen/doxygen && /usr/bin/doxygen warning: Tag 'SYMBOL_CACHE_SIZE' at line 289 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'SHOW_DIRECTORIES' at line 473 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'COLS_IN_ALPHA_INDEX' at line 762 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'HTML_ALIGN_MEMBERS' at line 817 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'LATEX_SOURCE_CODE' at line 1066 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'XML_SCHEMA' at line 1158 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'XML_DTD' at line 1164 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'PERL_PATH' at line 1329 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'CLASS_DIAGRAMS' at line 1342 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'MSCGEN_PATH' at line 1351 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_FONTNAME' at line 1375 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_FONTSIZE' at line 1380 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_TRANSPARENT' at line 1504 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: argument 'a4wide' for option PAPER_TYPE is not a valid enum value Using the default: a4! warning: doxygen no longer ships with the FreeSans font. You may want to clear or change DOT_FONTNAME. Otherwise you run the risk that the wrong font is being used for dot generated graphs. Doxygen version used: 1.9.8 Searching for include files... Searching for example files... Searching for images... Searching for dot files... Searching for msc files... Searching for dia files... Searching for files to exclude Searching INPUT for files to process... Searching for files in directory /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi Searching for files in directory /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include Searching for files in directory /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm Searching for files in directory /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/internal Searching for files in directory /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src Searching for files in directory /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi Searching for files in directory /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include Searching for files in directory /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm Searching for files in directory /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/internal Searching for files in directory /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/src Searching for files in directory /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi Searching for files in directory /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/include Searching for files in directory /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/include/openmm Searching for files in directory /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/include/openmm/internal Searching for files in directory /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/src Searching for files in directory /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi Searching for files in directory /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include Searching for files in directory /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include/openmm Searching for files in directory /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include/openmm/internal Searching for files in directory /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/src Reading and parsing tag files Parsing files Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/OpenMM.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/OpenMM.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/AndersenThermostat.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/AndersenThermostat.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/ATMForce.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/ATMForce.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/BrownianIntegrator.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/BrownianIntegrator.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CMAPTorsionForce.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CMAPTorsionForce.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CMMotionRemover.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CMMotionRemover.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CompoundIntegrator.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CompoundIntegrator.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/Context.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/Context.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomAngleForce.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomAngleForce.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomBondForce.h... 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Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomGBForce.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomGBForce.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomHbondForce.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomHbondForce.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomIntegrator.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomIntegrator.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomManyParticleForce.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomManyParticleForce.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomNonbondedForce.h... 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Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/LangevinMiddleIntegrator.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/LocalEnergyMinimizer.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/LocalEnergyMinimizer.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/MonteCarloAnisotropicBarostat.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/MonteCarloAnisotropicBarostat.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/MonteCarloBarostat.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/MonteCarloBarostat.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/MonteCarloFlexibleBarostat.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/MonteCarloFlexibleBarostat.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/MonteCarloMembraneBarostat.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/MonteCarloMembraneBarostat.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/NonbondedForce.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/NonbondedForce.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/NoseHooverChain.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/NoseHooverChain.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/NoseHooverIntegrator.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/NoseHooverIntegrator.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/OpenMMException.h... 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Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/Vec3.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/Vec3.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/VerletIntegrator.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/VerletIntegrator.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/VirtualSite.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/VirtualSite.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/olla/include/openmm/Platform.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/olla/include/openmm/Platform.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/serialization/include/openmm/serialization/SerializationNode.h... 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Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/AmoebaMultipoleForce.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/AmoebaTorsionTorsionForce.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/AmoebaTorsionTorsionForce.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/AmoebaVdwForce.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/AmoebaVdwForce.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/AmoebaWcaDispersionForce.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/AmoebaWcaDispersionForce.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/HippoNonbondedForce.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/HippoNonbondedForce.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/OpenMMAmoeba.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/OpenMMAmoeba.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/include/openmm/RPMDIntegrator.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/include/openmm/RPMDIntegrator.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/include/openmm/RPMDMonteCarloBarostat.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/include/openmm/RPMDMonteCarloBarostat.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include/openmm/DrudeForce.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include/openmm/DrudeForce.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include/openmm/DrudeIntegrator.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include/openmm/DrudeIntegrator.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include/openmm/DrudeLangevinIntegrator.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include/openmm/DrudeLangevinIntegrator.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include/openmm/DrudeNoseHooverIntegrator.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include/openmm/DrudeNoseHooverIntegrator.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include/openmm/DrudeSCFIntegrator.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include/openmm/DrudeSCFIntegrator.h... Preprocessing /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include/OpenMMDrude.h... Parsing file /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include/OpenMMDrude.h... Building macro definition list... Building group list... Building directory list... Building namespace list... Building file list... Building class list... Building concept list... Computing nesting relations for classes... Associating documentation with classes... Associating documentation with concepts... Associating documentation with modules... Building example list... Searching for enumerations... Searching for documented typedefs... Searching for members imported via using declarations... Searching for included using directives... Searching for documented variables... Building interface member list... Building member list... Searching for friends... Searching for documented defines... Computing class inheritance relations... Computing class usage relations... Flushing cached template relations that have become invalid... Computing class relations... Add enum values to enums... Searching for member function documentation... Creating members for template instances... Building page list... Search for main page... Computing page relations... Determining the scope of groups... Computing module relations... Sorting lists... Determining which enums are documented Computing member relations... Building full member lists recursively... Adding members to member groups. Computing member references... Inheriting documentation... Generating disk names... Adding source references... Adding xrefitems... Sorting member lists... Setting anonymous enum type... Computing dependencies between directories... Generating citations page... Counting members... Counting data structures... Resolving user defined references... Finding anchors and sections in the documentation... Transferring function references... Combining using relations... Adding members to index pages... Correcting members for VHDL... Computing tooltip texts... Generating style sheet... Generating search indices... Generating example documentation... Generating file sources... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/olla/include/openmm/Platform.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/OpenMM.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/AndersenThermostat.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/ATMForce.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/BrownianIntegrator.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CMAPTorsionForce.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CMMotionRemover.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CompoundIntegrator.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/Context.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomAngleForce.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomBondForce.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomCentroidBondForce.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomCompoundBondFor[ 20%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/Messages.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/Messages.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/Messages.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/Messages.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/Messages.cpp ce.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomCVForce.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomExternalForce.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomGBForce.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomHbondForce.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomIntegrator.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomManyParticleForce.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomNonbondedForce.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/CustomTorsionForce.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/Force.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/GayBerneForce.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/GBSAOBCForce.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/HarmonicAngleForce.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/HarmonicBondForce.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/Integrator.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/LangevinIntegrator.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/LangevinMiddleIntegrator.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/LocalEnergyMinimizer.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/MonteCarloAnisotropicBarostat.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/MonteCarloBarostat.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/MonteCarloFlexibleBarostat.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/MonteCarloMembraneBarostat.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/NonbondedForce.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/NoseHooverChain.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/NoseHooverIntegrator.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/OpenMMException.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/PeriodicTorsionForce.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/RBTorsionForce.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/RMSDForce.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/State.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/System.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/TabulatedFunction.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/Units.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/VariableLangevinIntegrator.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/VariableVerletIntegrator.h... Generating code for file /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/Vec3.h... Generating code for file /build/reproducible-path/openm[ 20%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloAnisotropicBarostat.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloAnisotropicBarostat.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloAnisotropicBarostat.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloAnisotropicBarostat.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/MonteCarloAnisotropicBarostat.cpp [ 20%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloAnisotropicBarostatImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloAnisotropicBarostatImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloAnisotropicBarostatImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloAnisotropicBarostatImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/MonteCarloAnisotropicBarostatImpl.cpp [ 20%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloBarostat.cpp.o /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/TabulatedFunction.h:204: warning: The following parameter of OpenMM::Continuous3DFunction::Continuous3DFunction(int xsize, int ysize, int zsize, const std::vector< double > &values, double xmin, double xmax, double ymin, double ymax, double zmin, double zmax, bool periodic=false) is not documented: parameter 'zsize' /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloBarostat.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloBarostat.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloBarostat.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/MonteCarloBarostat.cpp [ 20%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloBarostatImpl.cpp.o 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-I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloBarostatImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloBarostatImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloBarostatImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/MonteCarloBarostatImpl.cpp m-8.1.1+dfsg/openmmapi/include/openmm/VerletIntegrator.h... 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Generating docs for compound OpenMM::CustomC[ 20%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloFlexibleBarostat.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloFlexibleBarostat.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloFlexibleBarostat.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloFlexibleBarostat.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/MonteCarloFlexibleBarostat.cpp [ 20%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloFlexibleBarostatImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include 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-I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloFlexibleBarostatImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloFlexibleBarostatImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloFlexibleBarostatImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/MonteCarloFlexibleBarostatImpl.cpp [ 20%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloMembraneBarostat.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloMembraneBarostat.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloMembraneBarostat.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloMembraneBarostat.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/MonteCarloMembraneBarostat.cpp [ 20%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloMembraneBarostatImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloMembraneBarostatImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloMembraneBarostatImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/MonteCarloMembraneBarostatImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/MonteCarloMembraneBarostatImpl.cpp [ 20%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/NonbondedForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/NonbondedForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/NonbondedForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/NonbondedForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/NonbondedForce.cpp [ 20%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/NonbondedForceImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/NonbondedForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/NonbondedForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/NonbondedForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/NonbondedForceImpl.cpp [ 20%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/NoseHooverChain.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/NoseHooverChain.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/NoseHooverChain.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/NoseHooverChain.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/NoseHooverChain.cpp /build/reproducible-path/openmm-8.1.1+dfsg/serialization/include/openmm/serialization/SerializationNode.h:95: warning: The following parameter of OpenMM::SerializationNode::getChildNode(const std::string &name) is not documented: parameter 'name' /build/reproducible-path/openmm-8.1.1+dfsg/serialization/include/openmm/serialization/SerializationNode.h:88: warning: The following parameter of OpenMM::SerializationNode::getChildNode(const std::string &name) const is not documented: parameter 'name' [ 20%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/NoseHooverIntegrator.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM 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-I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/NoseHooverIntegrator.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/NoseHooverIntegrator.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/NoseHooverIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/NoseHooverIntegrator.cpp [ 20%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/OSRngSeed.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/OSRngSeed.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/OSRngSeed.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/OSRngSeed.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/OSRngSeed.cpp [ 20%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/PeriodicTorsionForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/PeriodicTorsionForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/PeriodicTorsionForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/PeriodicTorsionForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/PeriodicTorsionForce.cpp [ 20%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/PeriodicTorsionForceImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/PeriodicTorsionForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/PeriodicTorsionForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/PeriodicTorsionForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/PeriodicTorsionForceImpl.cpp [ 20%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/RBTorsionForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/RBTorsionForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/RBTorsionForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/RBTorsionForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/RBTorsionForce.cpp VForce... Generating docs for compound OpenMM::CustomExternalForce... Generating docs for compound OpenMM::CustomGBForce... Generating docs for compound OpenMM::CustomHbondForce... Generating docs for compound OpenMM::CustomIntegrator... Generating docs for compound OpenMM::CustomManyParticleForce... Generating docs for compound OpenMM::CustomNonbondedForce... Generating docs for compound OpenMM::CustomTorsionForce... Generating docs for compound OpenMM::Discrete1DFunction... Generating docs for compound OpenMM::Discrete2DFunction... Generating docs for compound OpenMM::Discrete3DFunction... Generating docs for compound OpenMM::DrudeForce... Generating docs for compound OpenMM::DrudeIntegrator... Generating docs for compound OpenMM::DrudeLangevinIntegrator... Generating docs for compound OpenMM::DrudeNoseHooverIntegrator... Generating docs for compound OpenMM::DrudeSCFIntegrator... Generating docs for compound OpenMM::Force... Generating docs for compound OpenMM::GayBerneForce... Generating docs for compound OpenMM::GBSAOBCForce... Generating docs for compound OpenMM::HarmonicAngleForce... Generating docs for compound OpenMM::HarmonicBondForce... Generating docs for compound OpenMM::HippoNonbondedForce... Generating docs for compound OpenMM::Integrator... Generating docs for compound OpenMM::LangevinIntegrator... Generating docs for compound OpenMM::LangevinMiddleIntegrator... Generating docs for compound OpenMM::LocalCoordinatesSite... Generating docs for compound OpenMM::LocalEnergyMinimizer... Generating docs for compound OpenMM::MinimizationReporter... Generating docs for compound OpenMM::MonteCarloAnisotropicBarostat... Generating docs for compound OpenMM::MonteCarloBarostat... Generating docs for compound OpenMM::MonteCarloFlexibleBarostat... Generating docs for compound OpenMM::MonteCarloMembraneBarostat... Generating docs for compound OpenMM::NonbondedForce... Generating docs for compound OpenMM::NoseHooverChain... Generating docs for compound OpenMM::NoseHooverIntegrator... Generating docs for compound OpenMM::OpenMMException... Generating docs for compound OpenMM::OutOfPlaneSite... Generating docs for compound OpenMM::PeriodicTorsionForce... Generating docs for compound OpenMM::Platform... Generating docs for compound OpenMM::RBTorsionForce... Generating docs for compound OpenMM::RMSDForce... Generating docs for compound OpenMM::RPMDIntegrator... Generating docs for compound OpenMM::RPMDMonteCarloBarostat... Generating docs for compound OpenMM::SerializationNode... Generating docs for compound OpenMM::SerializationProxy... Generating docs for compound OpenMM::State... Generating docs for compound OpenMM::System... Generating docs for compound OpenMM::TabulatedFunction... Generating docs for compound OpenMM::ThreeParticleAverageSite... Generating docs for compound OpenMM::TwoParticleAverageSite... Generating docs for compound OpenMM::VariableLangevinIntegrator... Generating docs for compound OpenMM::VariableVerletIntegrator... Generating docs for compound OpenMM::Vec3... Generating docs for compound OpenMM::VerletIntegrator... Generating docs for compound OpenMM::VirtualSite... Generating docs for compound OpenMM::XmlSerializer... Generating graph info page... Generating directory documentation... Generating index page... Generating page index... Generating topic index... Generating module index... Generating module member index... Generating namespace index... Generating namespace member index... Generating concept index... Generating annotated compound index... Generating alphabetical compound index... Generating hierarchical class index... Generating member index... Generating file index... Generating file member index... Generating example index... finalizing index lists... writing tag file... Generating XML output... Generating XML output for class OpenMM::AmoebaGeneralizedKirkwoodForce Generating XML output for class OpenMM::AmoebaMultipoleForce Generating XML output for class OpenMM::AmoebaTorsionTorsionForce Generating XML output for class OpenMM::AmoebaVdwForce Generating XML output for class OpenMM::Am/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/TabulatedFunction.h:204: warning: The following parameter of OpenMM::Continuous3DFunction::Continuous3DFunction(int xsize, int ysize, int zsize, const std::vector< double > &values, double xmin, double xmax, double ymin, double ymax, double zmin, double zmax, bool periodic=false) is not documented: parameter 'zsize' [ 20%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/RBTorsionForceImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/RBTorsionForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/RBTorsionForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/RBTorsionForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/RBTorsionForceImpl.cpp [ 20%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/RMSDForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/RMSDForce.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/RMSDForce.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/RMSDForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/RMSDForce.cpp [ 22%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/RMSDForceImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/RMSDForceImpl.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/RMSDForceImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/RMSDForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/RMSDForceImpl.cpp oebaWcaDispersionForce Generating XML output for class OpenMM::AndersenThermostat Generating XML output for class OpenMM::CustomAngleForce::AngleInfo Generating XML output for class OpenMM::HarmonicAngleForce::AngleInfo Generating XML output for class OpenMM::CustomAngleForce::AngleParameterInfo Generating XML output for class OpenMM::ATMForce Generating XML output for class OpenMM::CustomBondForce::BondInfo Generating XML output for class OpenMM::CustomCentroidBondForce::BondInfo Generating XML output for class OpenMM::CustomCompoundBondForce::BondInfo Generating XML output for class OpenMM::HarmonicBondForce::BondInfo Generating XML output for class OpenMM::CustomBondForce::BondParameterInfo Generating XML output for class OpenMM::CustomCentroidBondForce::BondParameterInfo Generating XML output for class OpenMM::CustomCompoundBondForce::BondParameterInfo Generating XML output for class OpenMM::BrownianIntegrator Generating XML output for class OpenMM::CMAPTorsionForce Generating XML output for class OpenMM::CMAPTorsionForce::CMAPTorsionInfo Generating XML output for class OpenMM::CMMotionRemover Generating XML output for class OpenMM::CompoundIntegrator Generating XML output for class OpenMM::CustomGBForce::ComputationInfo Generating XML output for class OpenMM::CustomIntegrator::ComputationInfo Generating XML output for class OpenMM::CustomNonbondedForce::ComputedValueInfo Generating XML output for class OpenMM::Context Generating XML output for class OpenMM::Continuous1DFunction Generating XML output for class OpenMM::Continuous2DFunction Generating XML output for class OpenMM::Continuous3DFunction Generating XML output for class OpenMM::CustomAngleForce Generating XML output for class OpenMM::CustomBondForce Generating XML output for class OpenMM::CustomCentroidBondForce Generating XML output for class OpenMM::CustomCompoundBondForce Generating XML output for class OpenMM::CustomCVForce Generating XML output for class OpenMM::CustomExternalForce Generating XML output for class OpenMM::CustomGBForce Generating XML output for class OpenMM::CustomHbondForce Generating XML output for class OpenMM::CustomIntegrator Generating XML output for class OpenMM::CustomManyParticleForce Generating XML output for class OpenMM::CustomNonbondedForce Generating XML output for class OpenMM::CustomTorsionForce Generating XML output for class OpenMM::Discrete1DFunction Generating XML output for class OpenMM::Discrete2DFunction Generating XML output for class OpenMM::Discrete3DFunction Generating XML output for class OpenMM::DrudeForce Generating XML output for class OpenMM::DrudeIntegrator Generating XML output for class OpenMM::DrudeLangevinIntegrator Generating XML output for class OpenMM::DrudeNoseHooverIntegrator Generating XML output for class OpenMM::DrudeSCFIntegrator Generating XML output for class OpenMM::GayBerneForce::ExceptionInfo Generating XML output for class OpenMM::HippoNonbondedForce::ExceptionInfo Generating XML output for class OpenMM::NonbondedForce::ExceptionInfo Generating XML output for class OpenMM::NonbondedForce::ExceptionOffsetInfo Generating XML output for class OpenMM::CustomGBForce::ExclusionInfo Generating XML output for class OpenMM::CustomHbondForce::ExclusionInfo Generating XML output for class OpenMM::CustomManyParticleForce::ExclusionInfo Generating XML output for class OpenMM::CustomNonbondedForce::ExclusionInfo Generating XML output for class OpenMM::Force Generating XML output for class OpenMM::CustomCentroidBondForce::FunctionInfo Generating XML output for class OpenMM::CustomCompoundBondForce::FunctionInfo Generating XML output for class OpenMM::CustomCVForce::FunctionInfo Generating XML output for class OpenMM::CustomGBForce::FunctionInfo Generating XML output for class OpenMM::CustomHbondForce::FunctionInfo Generating XML output for class OpenMM::CustomIntegrator::FunctionInfo Generating XML output for class OpenMM::CustomManyParticleForce::FunctionInfo Generating XML output for class OpenMM::CustomNonbondedForce::FunctionInfo Generating XML output for class OpenMM::GayBerneForce Generating XM[ 22%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/SplineFitter.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/SplineFitter.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/SplineFitter.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/SplineFitter.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/SplineFitter.cpp L output for class OpenMM::GBSAOBCForce Generating XML output for class OpenMM::ATMForce::GlobalParameterInfo Generating XML output for class OpenMM::CustomAngleForce::GlobalParameterInfo Generating XML output for class OpenMM::CustomBondForce::GlobalParameterInfo Generating XML output for class OpenMM::CustomCentroidBondForce::GlobalParameterInfo Generating XML output for class OpenMM::CustomCompoundBondForce::GlobalParameterInfo Generating XML output for class OpenMM::CustomCVForce::GlobalParameterInfo Generating XML output for class OpenMM::CustomExternalForce::GlobalParameterInfo Generating XML output for class OpenMM::CustomGBForce::GlobalParameterInfo Generating XML output for class OpenMM::CustomHbondForce::GlobalParameterInfo Generating XML output for class OpenMM::CustomManyParticleForce::GlobalParameterInfo Generating XML output for class OpenMM::CustomNonbondedForce::GlobalParameterInfo Generating XML output for class OpenMM::CustomTorsionForce::GlobalParameterInfo Generating XML output for class OpenMM::NonbondedForce::GlobalParameterInfo Generating XML output for class OpenMM::CustomCentroidBondForce::GroupInfo Generating XML output for class OpenMM::CustomHbondForce::GroupInfo Generating XML output for class OpenMM::HarmonicAngleForce Generating XML output for class OpenMM::HarmonicBondForce Generating XML output for class OpenMM::HippoNonbondedForce Generating XML output for class OpenMM::Integrator Generating XML output for class OpenMM::CustomNonbondedForce::InteractionGroupInfo Generating XML output for class OpenMM::LangevinIntegrator Generating XML output for class OpenMM::LangevinMiddleIntegrator Generating XML output for class OpenMM::LocalCoordinatesSite Generating XML output for class OpenMM::LocalEnergyMinimizer Generating XML output for class OpenMM::CMAPTorsionForce::MapInfo Generating XML output for class OpenMM::MinimizationReporter Generating XML output for class OpenMM::MonteCarloAnisotropicBarostat Generating XML output for class OpenMM::MonteCarloBarostat Generating XML output for class OpenMM::MonteCarloFlexibleBarostat Generating XML output for class OpenMM::MonteCarloMembraneBarostat Generating XML output for class OpenMM::AmoebaMultipoleForce::MultipoleInfo Generating XML output for class OpenMM::NonbondedForce Generating XML output for class OpenMM::NoseHooverChain Generating XML output for class OpenMM::NoseHooverIntegrator Generating XML output for class OpenMM::OpenMMException Generating XML output for class OpenMM::OutOfPlaneSite Generating XML output for class OpenMM::AmoebaGeneralizedKirkwoodForce::ParticleInfo Generating XML output for class OpenMM::ATMForce::ParticleInfo Generating XML output for class OpenMM::CustomExternalForce::ParticleInfo Generating XML output for class OpenMM::CustomGBForce::ParticleInfo Generating XML output for class OpenMM::CustomManyParticleForce::ParticleInfo Generating XML output for class OpenMM::CustomNonbondedForce::ParticleInfo Generating XML output for class OpenMM::DrudeForce::ParticleInfo Generating XML output for class OpenMM::GayBerneForce::ParticleInfo Generating XML output for class OpenMM::GBSAOBCForce::ParticleInfo Generating XML output for class OpenMM::HippoNonbondedForce::ParticleInfo Generating XML output for class OpenMM::NonbondedForce::ParticleInfo Generating XML output for class OpenMM::NonbondedForce::ParticleOffsetInfo Generating XML output for class OpenMM::CustomExternalForce::ParticleParameterInfo Generating XML output for class OpenMM::CustomManyParticleForce::ParticleParameterInfo Generating XML output for class OpenMM::AmoebaVdwForce::ParticleTypeInfo Generating XML output for class OpenMM::PeriodicTorsionForce Generating XML output for class OpenMM::PeriodicTorsionForce::PeriodicTorsionInfo Generating XML output for class OpenMM::CustomHbondForce::PerPairParameterInfo Generating XML output for class OpenMM::CustomGBForce::PerParticleParameterInfo Generating XML output for class OpenMM::CustomNonbondedForce::PerParticleParameterInfo Generating XML output for class OpenMM::Platform Generating XML output for class OpenMM/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include/openmm/serialization/SerializationNode.h:88: warning: The following parameter of OpenMM::SerializationNode::getChildNode(const std::string &name) const is not documented: parameter 'name' /build/reproducible-path/openmm-8.1.1+dfsg/serialization/include/openmm/serialization/SerializationNode.h:95: warning: The following parameter of OpenMM::SerializationNode::getChildNode(const std::string &name) is not documented: parameter 'name' ::RBTorsionForce Generating XML output for class OpenMM::RBTorsionForce::RBTorsionInfo Generating XML output for class OpenMM::RMSDForce Generating XML output for class OpenMM::RPMDIntegrator Generating XML output for class OpenMM::RPMDMonteCarloBarostat Generating XML output for class OpenMM::DrudeForce::ScreenedPairInfo Generating XML output for class OpenMM::SerializationNode Generating XML output for class OpenMM::SerializationProxy Generating XML output for class OpenMM::State Generating XML output for class OpenMM::State::StateBuilder Generating XML output for class OpenMM::System Generating XML output for class OpenMM::TabulatedFunction Generating XML output for class OpenMM::ThreeParticleAverageSite Generating XML output for class OpenMM::CustomTorsionForce::TorsionInfo Generating XML output for class OpenMM::CustomTorsionForce::TorsionParameterInfo Generating XML output for class OpenMM::AmoebaTorsionTorsionForce::TorsionTorsionGridInfo Generating XML output for class OpenMM::AmoebaTorsionTorsionForce::TorsionTorsionInfo Generating XML output for class OpenMM::TwoParticleAverageSite Generating XML output for class OpenMM::AmoebaVdwForce::TypePairInfo Generating XML output for class OpenMM::CustomCVForce::VariableInfo Generating XML output for class OpenMM::VariableLangevinIntegrator Generating XML output for class OpenMM::VariableVerletIntegrator Generating XML output for class OpenMM::AmoebaVdwForce::VdwInfo Generating XML output for class OpenMM::Vec3 Generating XML output for class OpenMM::VerletIntegrator Generating XML output for class OpenMM::VirtualSite Generating XML output for class OpenMM::AmoebaWcaDispersionForce::WcaDispersionInfo Generating XML output for class OpenMM::XmlSerializer Generating XML output for namespace OpenMM Generating XML output for namespace std Generating XML output for file Platform.h Generating XML output for file OpenMM.h Generating XML output for file AndersenThermostat.h Generating XML output for file ATMForce.h Generating XML output for file BrownianIntegrator.h Generating XML output for file CMAPTorsionForce.h Generating XML output for file CMMotionRemover.h Generating XML output for file CompoundIntegrator.h Generating XML output for file Context.h Generating XML output for file CustomAngleForce.h Generating XML output for file CustomBondForce.h Generating XML output for file CustomCentroidBondForce.h Generating XML output for file CustomCompoundBondForce.h Generating XML output for file CustomCVForce.h Generating XML output for file CustomExternalForce.h Generating XML output for file CustomGBForce.h Generating XML output for file CustomHbondForce.h Generating XML output for file CustomIntegrator.h Generating XML output for file CustomManyParticleForce.h Generating XML output for file CustomNonbondedForce.h Generating XML output for file CustomTorsionForce.h Generating XML output for file Force.h Generating XML output for file GayBerneForce.h Generating XML output for file GBSAOBCForce.h Generating XML output for file HarmonicAngleForce.h Generating XML output for file HarmonicBondForce.h Generating XML output for file Integrator.h Generating XML output for file LangevinIntegrator.h Generating XML output for file LangevinMiddleIntegrator.h Generating XML output for file LocalEnergyMinimizer.h Generating XML output for file MonteCarloAnisotropicBarostat.h Generating XML output for file MonteCarloBarostat.h Generating XML output for file MonteCarloFlexibleBarostat.h Generating XML output for file MonteCarloMembraneBarostat.h Generating XML output for file NonbondedForce.h Generating XML output for file NoseHooverChain.h Generating XML output for file NoseHooverIntegrator.h Generating XML output for file OpenMMException.h Generating XML output for file PeriodicTorsionForce.h Generating XML output for file RBTorsionForce.h Generating XML output for file RMSDForce.h Generating XML output for file State.h Generating XML output for file System.h Generating XML output for file TabulatedFunction.h Generating XML output for file Units.h Generating XML output for file VariableLangevinIntegrator.h Generating XML output for file VariableVerletIntegrator.h Generating XML output for file Vec3.h Generating XML output for file VerletIntegrator.h Generating XML output for file VirtualSite.h Generating XML output for file AmoebaGeneralizedKirkwoodForce.h Generating XML output for file AmoebaMultipoleForce.h Generating XML output for file AmoebaTorsionTorsionForce.h Generating XML output for file AmoebaVdwForce.h Generating XML output for file AmoebaWcaDispersionForce.h Generating XML output for file HippoNonbondedForce.h Generating XML output for file OpenMMAmoeba.h Generating XML output for file DrudeForce.h Generating XML output for file DrudeIntegrator.h Generating XML output for file DrudeLangevinIntegrator.h Generating XML output for file DrudeNoseHooverIntegrator.h Generating XML output for file DrudeSCFIntegrator.h Generating XML output for file OpenMMDrude.h Generating XML output for file RPMDIntegrator.h Generating XML output for file RPMDMonteCarloBarostat.h Generating XML output for file SerializationNode.h Generating XML output for file SerializationProxy.h Generating XML output for file XmlSerializer.h Generating XML output for page deprecated Generate XML output for dir /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/ Generate XML output for dir /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/ Generate XML output for dir /build/reproducible-path/openmm-8.1.1+dfsg/olla/include/ Generate XML output for dir /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/ Generate XML output for dir /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/ Generate XML output for dir /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include/ Generate XML output for dir /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/include/ Generate XML output for dir /build/reproducible-path/openmm-8.1.1+dfsg/serialization/include/ Generate XML output for dir /build/reproducible-path/openmm-8.1.1+dfsg/olla/ Generate XML output for dir /build/reproducible-path/openmm-8.1.1+dfsg/olla/include/openmm/ Generate XML output for dir /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/ Generate XML output for dir /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/ Generate XML output for dir /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include/openmm/ Generate XML output for dir /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/include/openmm/ Generate XML output for dir /build/reproducible-path/openmm-8.1.1+dfsg/serialization/include/openmm/ Generate XML output for dir /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/ Generate XML output for dir /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/ Generate XML output for dir /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/ Generate XML output for dir /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/ Generate XML output for dir /build/reproducible-path/openmm-8.1.1+dfsg/plugins/ Generate XML output for dir /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/ Generate XML output for dir /build/reproducible-path/openmm-8.1.1+dfsg/serialization/ Generate XML output for dir /build/reproducible-path/openmm-8.1.1+dfsg/serialization/include/openmm/serialization/ Running plantuml with JAVA... type lookup cache used 4851/65536 hits=27856 misses=5087 symbol lookup cache used 5057/65536 hits=48378 misses=5057 finished... [ 22%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/src/swig_doxygen/swigInputConfig.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/swigInputConfig.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/src/swig_doxygen/swigInputConfig.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/swigInputConfig.py [ 22%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/src/swig_doxygen/swigInputBuilder.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/swigInputBuilder.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/src/swig_doxygen/swigInputBuilder.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/swigInputBuilder.py [ 22%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/State.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/State.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/State.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/State.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/State.cpp [ 22%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/src/swig_doxygen/swig_lib/python/exceptions.i to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/swig_lib/python/exceptions.i cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/src/swig_doxygen/swig_lib/python/exceptions.i /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/swig_lib/python/exceptions.i [ 22%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/System.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/System.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/System.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/System.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/System.cpp [ 22%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/src/swig_doxygen/swig_lib/python/extend.i to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/swig_lib/python/extend.i cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/src/swig_doxygen/swig_lib/python/extend.i /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/swig_lib/python/extend.i [ 22%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/src/swig_doxygen/swig_lib/python/features.i to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/swig_lib/python/features.i cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/src/swig_doxygen/swig_lib/python/features.i /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/swig_lib/python/features.i [ 22%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/TabulatedFunction.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/TabulatedFunction.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/TabulatedFunction.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/TabulatedFunction.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/TabulatedFunction.cpp [ 22%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/src/swig_doxygen/swig_lib/python/header.i to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/swig_lib/python/header.i cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/src/swig_doxygen/swig_lib/python/header.i /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/swig_lib/python/header.i [ 22%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/src/swig_doxygen/swig_lib/python/pythoncode.i to 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/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/constants.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/unit/constants.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/constants.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/unit/doctests.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/doctests.py [ 22%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/unit/mymatrix.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/mymatrix.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && 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/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/unit/quantity.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/quantity.py [ 22%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/unit/standard_dimensions.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/standard_dimensions.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/unit/standard_dimensions.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/standard_dimensions.py [ 22%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/unit/unit.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/unit.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/unit/unit.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/unit.py [ 22%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/ThreadPool.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/ThreadPool.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/ThreadPool.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/ThreadPool.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/ThreadPool.cpp [ 22%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/unit/unit_definitions.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/unit_definitions.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/unit/unit_definitions.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/unit_definitions.py [ 22%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/VariableLangevinIntegrator.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/VariableLangevinIntegrator.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/VariableLangevinIntegrator.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/VariableLangevinIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/VariableLangevinIntegrator.cpp [ 22%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/unit/unit_math.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/unit_math.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/unit/unit_math.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/unit_math.py [ 22%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/unit/unit_operators.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/unit_operators.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/unit/unit_operators.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/unit/unit_operators.py [ 22%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/VariableVerletIntegrator.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/VariableVerletIntegrator.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/VariableVerletIntegrator.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/VariableVerletIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/VariableVerletIntegrator.cpp [ 22%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/vec3.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/vec3.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/openmm/vec3.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/vec3.py [ 22%] CMake-copying file 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-I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/VectorExpression.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/VectorExpression.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/VectorExpression.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/VectorExpression.cpp [ 25%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestATMForce.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestATMForce.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestATMForce.py 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-I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/VerletIntegrator.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/VerletIntegrator.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/VerletIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/src/VerletIntegrator.cpp [ 25%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestCharmmFiles.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestCharmmFiles.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestCharmmFiles.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestCharmmFiles.py [ 25%] Building CXX object CMakeFiles/OpenMM.dir/openmmapi/src/VirtualSite.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit 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-I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/openmmapi/src/VirtualSite.cpp.o -MF CMakeFiles/OpenMM.dir/openmmapi/src/VirtualSite.cpp.o.d -o CMakeFiles/OpenMM.dir/openmmapi/src/VirtualSite.cpp.o -c 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-I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/olla/src/Kernel.cpp.o -MF CMakeFiles/OpenMM.dir/olla/src/Kernel.cpp.o.d -o CMakeFiles/OpenMM.dir/olla/src/Kernel.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/olla/src/Kernel.cpp [ 25%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestDesmondDMSFile.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestDesmondDMSFile.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestDesmondDMSFile.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestDesmondDMSFile.py [ 25%] Building CXX object CMakeFiles/OpenMM.dir/olla/src/KernelImpl.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/olla/src/KernelImpl.cpp.o -MF CMakeFiles/OpenMM.dir/olla/src/KernelImpl.cpp.o.d -o CMakeFiles/OpenMM.dir/olla/src/KernelImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/olla/src/KernelImpl.cpp [ 27%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestElement.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestElement.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestElement.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestElement.py [ 27%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestForceField.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestForceField.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestForceField.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestForceField.py [ 27%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestForceGroups.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestForceGroups.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestForceGroups.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestForceGroups.py [ 27%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestGenerators.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestGenerators.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestGenerators.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestGenerators.py [ 27%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestGromacsGroFile.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestGromacsGroFile.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestGromacsGroFile.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestGromacsGroFile.py [ 27%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestGromacsTopFile.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestGromacsTopFile.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestGromacsTopFile.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestGromacsTopFile.py [ 27%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestIntegrators.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestIntegrators.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestIntegrators.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestIntegrators.py [ 27%] Building CXX object CMakeFiles/OpenMM.dir/olla/src/Platform.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/olla/src/Platform.cpp.o -MF CMakeFiles/OpenMM.dir/olla/src/Platform.cpp.o.d -o CMakeFiles/OpenMM.dir/olla/src/Platform.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/olla/src/Platform.cpp [ 27%] Building CXX object CMakeFiles/OpenMM.dir/libraries/quern/src/quern.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/quern/src/quern.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/quern/src/quern.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/quern/src/quern.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/src/quern.cpp [ 27%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestMetadynamics.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestMetadynamics.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestMetadynamics.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestMetadynamics.py [ 27%] Building CXX object CMakeFiles/OpenMM.dir/libraries/quern/src/quern_factorization.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/quern/src/quern_factorization.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/quern/src/quern_factorization.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/quern/src/quern_factorization.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/src/quern_factorization.cpp [ 27%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestModeller.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestModeller.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestModeller.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestModeller.py [ 27%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestNumpyCompatibility.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestNumpyCompatibility.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestNumpyCompatibility.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestNumpyCompatibility.py [ 27%] Building CXX object CMakeFiles/OpenMM.dir/libraries/quern/src/quern_order.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/quern/src/quern_order.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/quern/src/quern_order.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/quern/src/quern_order.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/src/quern_order.cpp [ 27%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestPatches.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestPatches.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestPatches.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestPatches.py [ 27%] Building CXX object CMakeFiles/OpenMM.dir/libraries/quern/src/quern_solver.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/quern/src/quern_solver.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/quern/src/quern_solver.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/quern/src/quern_solver.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/src/quern_solver.cpp [ 27%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestPdbFile.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestPdbFile.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestPdbFile.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestPdbFile.py [ 27%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestPdbReporter.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestPdbReporter.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestPdbReporter.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestPdbReporter.py [ 27%] Building CXX object CMakeFiles/OpenMM.dir/libraries/lepton/src/CompiledExpression.cpp.o [ 27%] Building CXX object CMakeFiles/OpenMM.dir/libraries/lepton/src/CompiledVectorExpression.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/lepton/src/CompiledExpression.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/lepton/src/CompiledExpression.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/lepton/src/CompiledExpression.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/src/CompiledExpression.cpp /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/lepton/src/CompiledVectorExpression.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/lepton/src/CompiledVectorExpression.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/lepton/src/CompiledVectorExpression.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/src/CompiledVectorExpression.cpp [ 27%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestPdbxFile.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestPdbxFile.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestPdbxFile.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestPdbxFile.py [ 27%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestPickle.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestPickle.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestPickle.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestPickle.py [ 29%] Building CXX object CMakeFiles/OpenMM.dir/libraries/lepton/src/ExpressionProgram.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/lepton/src/ExpressionProgram.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/lepton/src/ExpressionProgram.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/lepton/src/ExpressionProgram.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/src/ExpressionProgram.cpp [ 29%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestSimulatedTempering.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestSimulatedTempering.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestSimulatedTempering.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestSimulatedTempering.py [ 29%] Building CXX object CMakeFiles/OpenMM.dir/libraries/lepton/src/ExpressionTreeNode.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/lepton/src/ExpressionTreeNode.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/lepton/src/ExpressionTreeNode.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/lepton/src/ExpressionTreeNode.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/src/ExpressionTreeNode.cpp [ 29%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestSimulation.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestSimulation.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestSimulation.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestSimulation.py [ 29%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestStateDataReporter.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestStateDataReporter.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestStateDataReporter.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestStateDataReporter.py [ 29%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestSwigWrappers.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestSwigWrappers.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestSwigWrappers.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestSwigWrappers.py [ 29%] Building CXX object CMakeFiles/OpenMM.dir/libraries/lepton/src/Operation.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/lepton/src/Operation.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/lepton/src/Operation.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/lepton/src/Operation.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/src/Operation.cpp [ 31%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestTopology.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestTopology.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestTopology.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestTopology.py [ 31%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestUnitCell.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestUnitCell.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestUnitCell.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestUnitCell.py [ 31%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestUnits.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestUnits.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestUnits.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestUnits.py [ 31%] Building CXX object CMakeFiles/OpenMM.dir/libraries/lepton/src/ParsedExpression.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/lepton/src/ParsedExpression.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/lepton/src/ParsedExpression.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/lepton/src/ParsedExpression.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/src/ParsedExpression.cpp [ 31%] Building CXX object CMakeFiles/OpenMM.dir/libraries/lepton/src/Parser.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/lepton/src/Parser.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/lepton/src/Parser.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/lepton/src/Parser.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/src/Parser.cpp [ 31%] Building CXX object CMakeFiles/OpenMM.dir/libraries/sfmt/src/SFMT.cpp.o [ 31%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestVec3.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestVec3.py cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestVec3.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestVec3.py /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DHAVE_SSE2=1 -MD -MT CMakeFiles/OpenMM.dir/libraries/sfmt/src/SFMT.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/sfmt/src/SFMT.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/sfmt/src/SFMT.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/src/SFMT.cpp [ 31%] Building CXX object CMakeFiles/OpenMM.dir/libraries/lbfgs/src/lbfgs.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/lbfgs/src/lbfgs.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/lbfgs/src/lbfgs.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/lbfgs/src/lbfgs.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/src/lbfgs.cpp [ 31%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestXtcFile.py to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestXtcFile.py [ 31%] Building CXX object CMakeFiles/OpenMM.dir/libraries/hilbert/src/hilbert.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/TestXtcFile.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/TestXtcFile.py [ 31%] Building CXX object CMakeFiles/OpenMM.dir/libraries/csha1/src/SHA1.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/hilbert/src/hilbert.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/hilbert/src/hilbert.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/hilbert/src/hilbert.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/src/hilbert.cpp /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/csha1/src/SHA1.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/csha1/src/SHA1.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/csha1/src/SHA1.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/src/SHA1.cpp [ 31%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/ReferenceKernelFactory.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/ReferenceKernelFactory.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/ReferenceKernelFactory.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/ReferenceKernelFactory.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/ReferenceKernelFactory.cpp [ 31%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/pytest.ini to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/pytest.ini cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/pytest.ini /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/pytest.ini [ 31%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/18protein.parm7 to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/18protein.parm7 cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/18protein.parm7 /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/18protein.parm7 [ 31%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/18protein.rst7 to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/18protein.rst7 cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/18protein.rst7 /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/18protein.rst7 [ 31%] Building CXX object 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-I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/ReferenceKernels.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/ReferenceKernels.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/ReferenceKernels.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/ReferenceKernels.cpp [ 31%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/1T2Y.pdb to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/1T2Y.pdb cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/1T2Y.pdb /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/1T2Y.pdb [ 31%] Building CXX object 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-I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/ReferencePlatform.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/ReferencePlatform.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/ReferencePlatform.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/ReferencePlatform.cpp [ 31%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/1ppt.gro to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/1ppt.gro cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/1ppt.gro /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/1ppt.gro [ 31%] CMake-copying file 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31%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/ReferencePointFunctions.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/ReferencePointFunctions.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/ReferencePointFunctions.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/ReferencePointFunctions.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/ReferencePointFunctions.cpp [ 31%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/2ci2.pdb.top to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/2ci2.pdb.top cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/2ci2.pdb.top /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/2ci2.pdb.top [ 31%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/4TVP-dmj_wat-ion.psf to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/4TVP-dmj_wat-ion.psf cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/4TVP-dmj_wat-ion.psf /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/4TVP-dmj_wat-ion.psf [ 31%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/ReferenceTabulatedFunction.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/ReferenceTabulatedFunction.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/ReferenceTabulatedFunction.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/ReferenceTabulatedFunction.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/ReferenceTabulatedFunction.cpp [ 31%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ObcParameters.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ObcParameters.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ObcParameters.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ObcParameters.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ObcParameters.cpp [ 31%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/5dhfr_cube.pdb to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/5dhfr_cube.pdb cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/5dhfr_cube.pdb /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/5dhfr_cube.pdb [ 31%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/5dhfr_cube.psf to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/5dhfr_cube.psf cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/5dhfr_cube.psf /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/5dhfr_cube.psf [ 31%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceAndersenThermostat.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceAndersenThermostat.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceAndersenThermostat.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceAndersenThermostat.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceAndersenThermostat.cpp [ 31%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/DNA_mbondi3.inpcrd to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/DNA_mbondi3.inpcrd cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/DNA_mbondi3.inpcrd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/DNA_mbondi3.inpcrd [ 31%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceAngleBondIxn.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceAngleBondIxn.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceAngleBondIxn.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceAngleBondIxn.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceAngleBondIxn.cpp [ 31%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceBondForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include 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-I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceBondForce.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceBondForce.cpp.o.d -o 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/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala-ala-ala-implicit-forces/GBn_NoCutoff_Salt.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ala-ala-ala-implicit-forces/GBn_NoCutoff_Salt.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala-ala-ala-implicit-forces/GBn_NoCutoff_Salt.xml [ 33%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceBondIxn.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceBondIxn.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceBondIxn.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceBondIxn.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceBondIxn.cpp [ 33%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ala-ala-ala-implicit-forces/HCT_NoCutoff.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala-ala-ala-implicit-forces/HCT_NoCutoff.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ala-ala-ala-implicit-forces/HCT_NoCutoff.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala-ala-ala-implicit-forces/HCT_NoCutoff.xml [ 33%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ala-ala-ala-implicit-forces/OBC1_NonPeriodic.xml to 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/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala3_solv.parm7 cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ala3_solv.parm7 /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala3_solv.parm7 [ 33%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ala3_solv.psf to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala3_solv.psf cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ala3_solv.psf /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala3_solv.psf [ 33%] CMake-copying file 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-I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceBrownianDynamics.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceBrownianDynamics.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceBrownianDynamics.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceBrownianDynamics.cpp [ 35%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCCMAAlgorithm.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCCMAAlgorithm.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCCMAAlgorithm.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCCMAAlgorithm.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceCCMAAlgorithm.cpp [ 35%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ala_ala_ala.crd to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala_ala_ala.crd cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ala_ala_ala.crd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ala_ala_ala.crd [ 35%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceConstraints.cpp.o [ 35%] Building CXX object 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-fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceConstraints.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceConstraints.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceConstraints.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceConstraints.cpp /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include 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-fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCMAPTorsionIxn.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCMAPTorsionIxn.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCMAPTorsionIxn.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceCMAPTorsionIxn.cpp [ 35%] CMake-copying file 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/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/alanine-dipeptide-implicit-forces/OBC2_NonPeriodic_Salt.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-implicit-forces/OBC2_NonPeriodic_Salt.xml [ 37%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/alanine-dipeptide-implicit.inpcrd to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-implicit.inpcrd cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/alanine-dipeptide-implicit.inpcrd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-implicit.inpcrd [ 37%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/alanine-dipeptide-implicit.pdb to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-implicit.pdb cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/alanine-dipeptide-implicit.pdb /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-implicit.pdb [ 37%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/alanine-dipeptide-implicit.prmtop to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/alanine-dipeptide-implicit.prmtop cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different 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/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/altlocs2.pdb /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/altlocs2.pdb [ 37%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/amber.ncrst to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/amber.ncrst cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/amber.ncrst /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/amber.ncrst [ 37%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/amoeba-ion-in-water.pdb to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/amoeba-ion-in-water.pdb cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/amoeba-ion-in-water.pdb /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/amoeba-ion-in-water.pdb [ 37%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomBondIxn.cpp.o [ 39%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/bcd-nabumetone_lig.dms to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/bcd-nabumetone_lig.dms /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomBondIxn.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomBondIxn.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomBondIxn.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceCustomBondIxn.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/bcd-nabumetone_lig.dms /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/bcd-nabumetone_lig.dms [ 39%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomCVForce.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomCVForce.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomCVForce.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomCVForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceCustomCVForce.cpp [ 39%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/bcd-nabumetone_rcpt.dms to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/bcd-nabumetone_rcpt.dms cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/bcd-nabumetone_rcpt.dms /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/bcd-nabumetone_rcpt.dms [ 39%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/bnz.gro to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/bnz.gro cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/bnz.gro /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/bnz.gro [ 39%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/bnz.top to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/bnz.top cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/bnz.top /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/bnz.top [ 39%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/bpti.pdb to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/bpti.pdb cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/bpti.pdb /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/bpti.pdb [ 39%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/charmm-solvated/envi.str to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/charmm-solvated/envi.str cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/charmm-solvated/envi.str /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/charmm-solvated/envi.str [ 39%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/charmm-solvated/isa_wat.3_kcl.m14.psf to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/charmm-solvated/isa_wat.3_kcl.m14.psf cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/charmm-solvated/isa_wat.3_kcl.m14.psf /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/charmm-solvated/isa_wat.3_kcl.m14.psf [ 39%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomCentroidBondIxn.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomCentroidBondIxn.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomCentroidBondIxn.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomCentroidBondIxn.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceCustomCentroidBondIxn.cpp [ 39%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/charmm-solvated/m14.prm to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/charmm-solvated/m14.prm cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/charmm-solvated/m14.prm /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/charmm-solvated/m14.prm [ 39%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/charmm-solvated/m14.rtf to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/charmm-solvated/m14.rtf cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/charmm-solvated/m14.rtf /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/charmm-solvated/m14.rtf [ 39%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomCompoundBondIxn.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomCompoundBondIxn.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomCompoundBondIxn.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomCompoundBondIxn.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceCustomCompoundBondIxn.cpp [ 39%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/charmm22.par to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/charmm22.par cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/charmm22.par /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/charmm22.par [ 39%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomDynamics.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomDynamics.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomDynamics.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomDynamics.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceCustomDynamics.cpp [ 39%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/charmm22.rtf to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/charmm22.rtf cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/charmm22.rtf /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/charmm22.rtf [ 39%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/chl1.crd to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/chl1.crd cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/chl1.crd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/chl1.crd [ 39%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/chl1.psf to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/chl1.psf cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/chl1.psf /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/chl1.psf [ 39%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomExternalIxn.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomExternalIxn.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomExternalIxn.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomExternalIxn.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceCustomExternalIxn.cpp [ 39%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/chlb_cgenff.crd to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/chlb_cgenff.crd cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/chlb_cgenff.crd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/chlb_cgenff.crd [ 39%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/chlb_cgenff.psf to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/chlb_cgenff.psf cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/chlb_cgenff.psf /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/chlb_cgenff.psf [ 39%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/crds_box.rst7 to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/crds_box.rst7 cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/crds_box.rst7 /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/crds_box.rst7 [ 39%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/crds_vels.rst7 to 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/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ff14ipq.rst7 /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ff14ipq.rst7 [ 41%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ff_with_includes.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ff_with_includes.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ff_with_includes.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ff_with_includes.xml [ 41%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/formaldehyde.pdb to 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/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/insertions.pdbx cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/insertions.pdbx /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/insertions.pdbx [ 41%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomGBIxn.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomGBIxn.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomGBIxn.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomGBIxn.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceCustomGBIxn.cpp [ 41%] CMake-copying file 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CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ions.pdb to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ions.pdb cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ions.pdb /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ions.pdb [ 41%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ions.psf to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ions.psf cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/ions.psf /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/ions.psf [ 41%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomHbondIxn.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomHbondIxn.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomHbondIxn.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomHbondIxn.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceCustomHbondIxn.cpp [ 41%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/lysozyme-implicit-forces.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/lysozyme-implicit-forces.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/lysozyme-implicit-forces.xml /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/lysozyme-implicit-forces.xml [ 41%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomManyParticleIxn.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomManyParticleIxn.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomManyParticleIxn.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomManyParticleIxn.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceCustomManyParticleIxn.cpp [ 41%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/lysozyme-implicit.pdb to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/lysozyme-implicit.pdb cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/lysozyme-implicit.pdb /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/lysozyme-implicit.pdb [ 43%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/methanol-box.pdb to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/methanol-box.pdb cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/methanol-box.pdb /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/methanol-box.pdb [ 43%] CMake-copying file 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-I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomNonbondedIxn.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomNonbondedIxn.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomNonbondedIxn.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceCustomNonbondedIxn.cpp [ 43%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/par_all36_lipid.prm to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/par_all36_lipid.prm cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/par_all36_lipid.prm /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/par_all36_lipid.prm [ 43%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/par_all36_prot.prm to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/par_all36_prot.prm cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/par_all36_prot.prm /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/par_all36_prot.prm [ 43%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/peptide_with_tip4p.inpcrd to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/peptide_with_tip4p.inpcrd cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/peptide_with_tip4p.inpcrd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/peptide_with_tip4p.inpcrd [ 43%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/peptide_with_tip4p.prmtop to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/peptide_with_tip4p.prmtop cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/peptide_with_tip4p.prmtop /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/peptide_with_tip4p.prmtop [ 43%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/test_amber_ff.xml to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/test_amber_ff.xml cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/test_amber_ff.xml 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-I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomTorsionIxn.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomTorsionIxn.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceCustomTorsionIxn.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceCustomTorsionIxn.cpp [ 43%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/tip5p.pdb to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/tip5p.pdb cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/tip5p.pdb /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/tip5p.pdb [ 43%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/top_all36_cgenff.rtf to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/top_all36_cgenff.rtf cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/top_all36_cgenff.rtf /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/top_all36_cgenff.rtf [ 43%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceDynamics.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceDynamics.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceDynamics.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceDynamics.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceDynamics.cpp [ 45%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/toppar_all36_lipid_cholesterol.str to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/toppar_all36_lipid_cholesterol.str cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/toppar_all36_lipid_cholesterol.str /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/toppar_all36_lipid_cholesterol.str [ 45%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/toppar_drude_master_protein_2013e.str to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/toppar_drude_master_protein_2013e.str cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different 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-I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceForce.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceForce.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceForce.cpp [ 45%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/toppar_drude_nucleic_acid_2017b.str to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/toppar_drude_nucleic_acid_2017b.str cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/toppar_drude_nucleic_acid_2017b.str /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/toppar_drude_nucleic_acid_2017b.str [ 45%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/toppar_water_ions.str to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/toppar_water_ions.str cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/toppar_water_ions.str 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/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/tz2.truncoct.parm7 /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/tz2.truncoct.parm7 [ 45%] CMake-copying file /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/tz2.truncoct.rst7 to /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/tz2.truncoct.rst7 cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/systems/tz2.truncoct.rst7 /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems/tz2.truncoct.rst7 [ 45%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceGayBerneForce.cpp.o /usr/bin/c++ 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-I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY 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/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python && /usr/bin/cmake -E copy_if_different /build/reproducible-path/openmm-8.1.1+dfsg/wrappers/python/tests/validateModeller.py /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/validateModeller.py [ 45%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceHarmonicBondIxn.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceHarmonicBondIxn.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceHarmonicBondIxn.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceHarmonicBondIxn.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceHarmonicBondIxn.cpp [ 45%] Creating OpenMM Python swig input files... cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen && /usr/bin/python3 /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen/swigInputBuilder.py -i /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/wrappers/python/src/swig_doxygen/doxygen/xml -c swigInputConfig.py -d OpenMM_docstring.i -o OpenMMSwigHeaders.i -a swig_lib/python/pythonprepend.i -z swig_lib/python/pythonappend.i -v 4.2.1 [ 47%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceLJCoulomb14.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceLJCoulomb14.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceLJCoulomb14.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceLJCoulomb14.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceLJCoulomb14.cpp [ 47%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceLJCoulombIxn.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceLJCoulombIxn.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceLJCoulombIxn.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceLJCoulombIxn.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceLJCoulombIxn.cpp [ 47%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceLangevinMiddleDynamics.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceLangevinMiddleDynamics.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceLangevinMiddleDynamics.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceLangevinMiddleDynamics.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceLangevinMiddleDynamics.cpp GayBerneForce.getCutoffDistance() returns unit.nanometers GayBerneForce.getSwitchingDistance() returns unit.nanometers GayBerneForce.getParticleParameters() returns sigma as unit.nanometer GayBerneForce.getParticleParameters() returns epsilon as unit.kilojoule_per_mole GayBerneForce.getParticleParameters() returns xparticle as None GayBerneForce.getParticleParameters() returns yparticle as None GayBerneForce.getParticleParameters() returns sx as unit.nanometer GayBerneForce.getParticleParameters() returns sy as unit.nanometer GayBerneForce.getParticleParameters() returns sz as unit.nanometer GayBerneForce.getParticleParameters() returns ex as None GayBerneForce.getParticleParameters() returns ey as None GayBerneForce.getParticleParameters() returns ez as None Integrator.getStepSize() returns unit.picosecond DrudeIntegrator.getDrudeTemperature() returns unit.kelvin DrudeIntegrator.getMaxDrudeDistance() returns unit.nanometer DrudeLangevinIntegrator.getTemperature() returns unit.kelvin DrudeLangevinIntegrator.getFriction() returns unit.picosecond**-1 DrudeLangevinIntegrator.getDrudeFriction() returns unit.picosecond**-1 DrudeLangevinIntegrator.computeSystemTemperature() returns unit.kelvin DrudeLangevinIntegrator.computeDrudeTemperature() returns unit.kelvin VariableLangevinIntegrator.getTemperature() returns unit.kelvin VariableLangevinIntegrator.getFriction() returns unit.picosecond**-1 VariableLangevinIntegrator.getMaximumStepSize() returns unit.picosecond CMAPTorsionForce.getMapParameters() returns size as None CMAPTorsionForce.getMapParameters() returns energy as unit.kilojoule_per_mole CustomNonbondedForce.getCutoffDistance() returns unit.nanometers CustomNonbondedForce.getSwitchingDistance() returns unit.nanometers PeriodicTorsionForce.getTorsionParameters() returns particle1 as None PeriodicTorsionForce.getTorsionParameters() returns particle2 as None PeriodicTorsionForce.getTorsionParameters() returns particle3 as None PeriodicTorsionForce.getTorsionParameters() returns particle4 as None PeriodicTorsionForce.getTorsionParameters() returns periodicity as None PeriodicTorsionForce.getTorsionParameters() returns phase as unit.radian PeriodicTorsionForce.getTorsionParameters() returns k as unit.kilojoule_per_mole DrudeSCFIntegrator.getMinimizationErrorTolerance() returns unit.kilojoules_per_mole/unit.nanometer BrownianIntegrator.getTemperature() returns unit.kelvin BrownianIntegrator.getFriction() returns unit.picosecond**-1 ATMForce.getParticleParameters() returns displacement1 as unit.nanometer ATMForce.getParticleParameters() returns displacement0 as unit.nanometer ATMForce.getPerturbationEnergy() returns unit.kilojoule_per_mole LocalCoordinatesSite.getLocalPosition() returns unit.nanometer Context.getTime() returns unit.picosecond CustomGBForce.getCutoffDistance() returns unit.nanometers AndersenThermostat.getDefaultTemperature() returns unit.kelvin AndersenThermostat.getDefaultCollisionFrequency() returns unit.picosecond**-1 HarmonicBondForce.getBondParameters() returns particle1 as None HarmonicBondForce.getBondParameters() returns particle2 as None HarmonicBondForce.getBondParameters() returns length as unit.nanometer HarmonicBondForce.getBondParameters() returns k as unit.kilojoule_per_mole/(unit.nanometer*unit.nanometer) HippoNonbondedForce.getCutoffDistance() returns unit.nanometers HippoNonbondedForce.getSwitchingDistance() returns unit.nanometers HippoNonbondedForce.getParticleParameters() returns charge as unit.elementary_charge HippoNonbondedForce.getParticleParameters() returns dipole as unit.elementary_charge*unit.nanometer HippoNonbondedForce.getParticleParameters() returns quadrupole as unit.elementary_charge*unit.nanometer**2 HippoNonbondedForce.getParticleParameters() returns coreCharge as unit.elementary_charge HippoNonbondedForce.getParticleParameters() returns alpha as None HippoNonbondedForce.getParticleParameters() returns epsilon as None HippoNonbondedForce.getParticleParameters() returns damping as None HippoNonbondedForce.getParticleParameters() returns c6 as None HippoNonbondedForce.getParticleParameters() returns pauliK as None HippoNonbondedForce.getParticleParameters() returns pauliQ as None HippoNonbondedForce.getParticleParameters() returns pauliAlpha as None HippoNonbondedForce.getParticleParameters() returns polarizability as None HippoNonbondedForce.getParticleParameters() returns axisType as None HippoNonbondedForce.getParticleParameters() returns multipoleAtomZ as None HippoNonbondedForce.getParticleParameters() returns multipoleAtomX as None HippoNonbondedForce.getParticleParameters() returns multipoleAtomY as None State.getTime() returns unit.picosecond State.getKineticEnergy() returns unit.kilojoules_per_mole State.getPotentialEnergy() returns unit.kilojoules_per_mole State.getPeriodicBoxVectors() returns unit.nanometers State.getPeriodicBoxVolume() returns unit.nanometers**3 HarmonicAngleForce.getAngleParameters() returns particle1 as None HarmonicAngleForce.getAngleParameters() returns particle2 as None HarmonicAngleForce.getAngleParameters() returns particle3 as None HarmonicAngleForce.getAngleParameters() returns angle as unit.radian HarmonicAngleForce.getAngleParameters() returns k as unit.kilojoule_per_mole/(unit.radian*unit.radian) RMSDForce.getReferencePositions() returns unit.nanometer LangevinIntegrator.getTemperature() returns unit.kelvin LangevinIntegrator.getFriction() returns unit.picosecond**-1 RPMDIntegrator.getTemperature() returns unit.kelvin RPMDIntegrator.getFriction() returns unit.picosecond**-1 RPMDIntegrator.getTotalEnergy() returns unit.kilojoules_per_mole MonteCarloMembraneBarostat.getDefaultPressure() returns unit.bar MonteCarloMembraneBarostat.getDefaultSurfaceTension() returns unit.bar*unit.nanometer MonteCarloMembraneBarostat.getDefaultTemperature() returns unit.kelvin RBTorsionForce.getTorsionParameters() returns particle1 as None RBTorsionForce.getTorsionParameters() returns particle2 as None RBTorsionForce.getTorsionParameters() returns particle3 as None RBTorsionForce.getTorsionParameters() returns particle4 as None RBTorsionForce.getTorsionParameters() returns c0 as unit.kilojoules_per_mole RBTorsionForce.getTorsionParameters() returns c1 as unit.kilojoules_per_mole RBTorsionForce.getTorsionParameters() returns c2 as unit.kilojoules_per_mole RBTorsionForce.getTorsionParameters() returns c3 as unit.kilojoules_per_mole RBTorsionForce.getTorsionParameters() returns c4 as unit.kilojoules_per_mole RBTorsionForce.getTorsionParameters() returns c5 as unit.kilojoules_per_mole DrudeForce.getParticleParameters() returns particle as None DrudeForce.getParticleParameters() returns particle1 as None DrudeForce.getParticleParameters() returns particle2 as None DrudeForce.getParticleParameters() returns particle3 as None DrudeForce.getParticleParameters() returns particle4 as None DrudeForce.getParticleParameters() returns charge as unit.elementary_charge DrudeForce.getParticleParameters() returns polarizability as unit.nanometer**3 DrudeForce.getParticleParameters() returns aniso12 as None DrudeForce.getParticleParameters() returns aniso34 as None AmoebaMultipoleForce.getCutoffDistance() returns unit.nanometer AmoebaMultipoleForce.getAEwald() returns 1/unit.nanometer AmoebaMultipoleForce.getMultipoleParameters() returns charge as unit.elementary_charge AmoebaMultipoleForce.getMultipoleParameters() returns molecularDipole as unit.elementary_charge*unit.nanometer AmoebaMultipoleForce.getMultipoleParameters() returns molecularQuadrupole as unit.elementary_charge*unit.nanometer**2 AmoebaMultipoleForce.getMultipoleParameters() returns axisType as None AmoebaMultipoleForce.getMultipoleParameters() returns multipoleAtomZ as None AmoebaMultipoleForce.getMultipoleParameters() returns multipoleAtomX as None AmoebaMultipoleForce.getMultipoleParameters() returns multipoleAtomY as None AmoebaMultipoleForce.getMultipoleParameters() returns thole as None AmoebaMultipoleForce.getMultipoleParameters() returns dampingFactor as None AmoebaMultipoleForce.getMultipoleParameters() returns polarity as unit.nanometer**3 AmoebaVdwForce.getParticleParameters() returns parentIndex as None [ 47%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceLincsAlgorithm.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceLincsAlgorithm.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceLincsAlgorithm.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceLincsAlgorithm.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceLincsAlgorithm.cpp AmoebaVdwForce.getParticleParameters() returns sigma as unit.nanometer AmoebaVdwForce.getParticleParameters() returns epsilon as unit.kilojoule_per_mole AmoebaVdwForce.getParticleParameters() returns reductionFactor as None AmoebaVdwForce.getParticleParameters() returns isAlchemical as None AmoebaVdwForce.getParticleParameters() returns typeIndex as None AmoebaVdwForce.getParticleTypeParameters() returns sigma as unit.nanometer AmoebaVdwForce.getParticleTypeParameters() returns epsilon as unit.kilojoule_per_mole AmoebaVdwForce.getTypePairParameters() returns type1 as None AmoebaVdwForce.getTypePairParameters() returns type2 as None AmoebaVdwForce.getTypePairParameters() returns sigma as unit.nanometer AmoebaVdwForce.getTypePairParameters() returns epsilon as unit.kilojoule_per_mole AmoebaVdwForce.getCutoffDistance() returns unit.nanometers AmoebaVdwForce.getCutoff() returns unit.nanometer NonbondedForce.getCutoffDistance() returns unit.nanometers NonbondedForce.getSwitchingDistance() returns unit.nanometers NonbondedForce.getPMEParameters() returns alpha as unit.nanometer**-1 NonbondedForce.getPMEParameters() returns nx as None NonbondedForce.getPMEParameters() returns ny as None NonbondedForce.getPMEParameters() returns nz as None NonbondedForce.getParticleParameters() returns charge as unit.elementary_charge NonbondedForce.getParticleParameters() returns sigma as unit.nanometer NonbondedForce.getParticleParameters() returns epsilon as unit.kilojoule_per_mole NonbondedForce.getExceptionParameters() returns particle1 as None NonbondedForce.getExceptionParameters() returns particle2 as None NonbondedForce.getExceptionParameters() returns chargeProd as unit.elementary_charge*unit.elementary_charge NonbondedForce.getExceptionParameters() returns sigma as unit.nanometer NonbondedForce.getExceptionParameters() returns epsilon as unit.kilojoule_per_mole MonteCarloBarostat.getDefaultPressure() returns unit.bar MonteCarloBarostat.getDefaultTemperature() returns unit.kelvin NoseHooverIntegrator.getTemperature() returns unit.kelvin NoseHooverIntegrator.getRelativeTemperature() returns unit.kelvin NoseHooverIntegrator.getCollisionFrequency() returns unit.picosecond**-1 NoseHooverIntegrator.getRelativeCollisionFrequency() returns unit.picosecond**-1 NoseHooverIntegrator.computeHeatBathEnergy() returns unit.kilojoules_per_mole NoseHooverIntegrator.getMaximumPairDistance() returns unit.nanometer DrudeNoseHooverIntegrator.getMaxDrudeDistance() returns unit.nanometer DrudeNoseHooverIntegrator.computeSystemTemperature() returns unit.kelvin DrudeNoseHooverIntegrator.computeDrudeTemperature() returns unit.kelvin VariableVerletIntegrator.getMaximumStepSize() returns unit.picosecond MonteCarloAnisotropicBarostat.getDefaultPressure() returns unit.bar MonteCarloAnisotropicBarostat.getDefaultTemperature() returns unit.kelvin GBSAOBCForce.getParticleParameters() returns charge as unit.elementary_charge GBSAOBCForce.getParticleParameters() returns radius as unit.nanometer GBSAOBCForce.getParticleParameters() returns scalingFactor as None GBSAOBCForce.getSurfaceAreaEnergy() returns unit.kilojoule_per_mole/unit.nanometer/unit.nanometer GBSAOBCForce.getCutoffDistance() returns unit.nanometers AmoebaGeneralizedKirkwoodForce.getParticleParameters() returns charge as unit.elementary_charge AmoebaGeneralizedKirkwoodForce.getParticleParameters() returns radius as unit.nanometer AmoebaGeneralizedKirkwoodForce.getParticleParameters() returns scalingFactor as None AmoebaGeneralizedKirkwoodForce.getProbeRadius() returns unit.nanometer AmoebaGeneralizedKirkwoodForce.getSurfaceAreaFactor() returns unit.kilojoule_per_mole/(unit.nanometer*unit.nanometer) CustomManyParticleForce.getCutoffDistance() returns unit.nanometers System.getParticleMass() returns unit.amu System.getConstraintParameters() returns particle1 as None System.getConstraintParameters() returns particle2 as None System.getConstraintParameters() returns distance as unit.nanometer System.getDefaultPeriodicBoxVectors() returns a as unit.nanometer System.getDefaultPeriodicBoxVectors() returns b as unit.nanometer System.getDefaultPeriodicBoxVectors() returns c as unit.nanometer AmoebaWcaDispersionForce.getParticleParameters() returns radius as unit.nanometer AmoebaWcaDispersionForce.getParticleParameters() returns epsilon as unit.kilojoule_per_mole AmoebaWcaDispersionForce.getEpso() returns unit.kilojoule_per_mole AmoebaWcaDispersionForce.getEpsh() returns unit.kilojoule_per_mole AmoebaWcaDispersionForce.getRmino() returns unit.nanometer AmoebaWcaDispersionForce.getRminh() returns unit.nanometer AmoebaWcaDispersionForce.getAwater() returns 1/(unit.nanometer*unit.nanometer*unit.nanometer) AmoebaWcaDispersionForce.getDispoff() returns unit.nanometer LangevinMiddleIntegrator.getTemperature() returns unit.kelvin LangevinMiddleIntegrator.getFriction() returns unit.picosecond**-1 MonteCarloFlexibleBarostat.getDefaultPressure() returns unit.bar MonteCarloFlexibleBarostat.getDefaultTemperature() returns unit.kelvin CustomHbondForce.getCutoffDistance() returns unit.nanometers RPMDMonteCarloBarostat.getDefaultPressure() returns unit.bar NoseHooverChain.getTemperature() returns unit.kelvin NoseHooverChain.getRelativeTemperature() returns unit.kelvin NoseHooverChain.getCollisionFrequency() returns unit.picosecond**-1 NoseHooverChain.getRelativeCollisionFrequency() returns unit.picosecond**-1 CompoundIntegrator.getStepSize() returns unit.picosecond [ 47%] Creating OpenMM Python module sources with swig... cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/src/swig_doxygen && /usr/bin/swig -python -c++ -outdir /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm -o OpenMMSwig.cxx OpenMM.i [ 47%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceMonteCarloBarostat.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceMonteCarloBarostat.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceMonteCarloBarostat.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceMonteCarloBarostat.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceMonteCarloBarostat.cpp [ 47%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceNeighborList.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceNeighborList.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceNeighborList.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceNeighborList.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceNeighborList.cpp [ 47%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceNoseHooverChain.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceNoseHooverChain.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceNoseHooverChain.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceNoseHooverChain.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceNoseHooverChain.cpp [ 47%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceNoseHooverDynamics.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceNoseHooverDynamics.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceNoseHooverDynamics.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceNoseHooverDynamics.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceNoseHooverDynamics.cpp OpenMMSwigHeaders.i:1951: Warning 314: 'None' is a python keyword, renaming to '_None' [ 47%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceObc.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceObc.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceObc.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceObc.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceObc.cpp [ 47%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferencePME.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 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-I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferencePairIxn.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferencePairIxn.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferencePairIxn.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferencePairIxn.cpp [ 47%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceProperDihedralBond.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 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-I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include 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-I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 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-I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceStochasticDynamics.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceStochasticDynamics.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceStochasticDynamics.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceStochasticDynamics.cpp [ 47%] Building CXX 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-I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 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-I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceVariableVerletDynamics.cpp.o -MF 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-I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceVerletDynamics.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceVerletDynamics.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceVerletDynamics.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceVerletDynamics.cpp [ 50%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceVirtualSites.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceVirtualSites.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceVirtualSites.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/ReferenceVirtualSites.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/ReferenceVirtualSites.cpp [ 50%] Building CXX object CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/SimTKOpenMMUtilities.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/SimTKOpenMMUtilities.cpp.o -MF CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/SimTKOpenMMUtilities.cpp.o.d -o CMakeFiles/OpenMM.dir/platforms/reference/src/SimTKReference/SimTKOpenMMUtilities.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference/SimTKOpenMMUtilities.cpp OpenMMSwigHeaders.i:525: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:584: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. [ 50%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/ATMForceProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/ATMForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/ATMForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/ATMForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/ATMForceProxy.cpp OpenMMSwigHeaders.i:664: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:747: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. [ 50%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/AndersenThermostatProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/AndersenThermostatProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/AndersenThermostatProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/AndersenThermostatProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/AndersenThermostatProxy.cpp [ 50%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/BrownianIntegratorProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/BrownianIntegratorProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/BrownianIntegratorProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/BrownianIntegratorProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/BrownianIntegratorProxy.cpp [ 50%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/CMAPTorsionForceProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/CMAPTorsionForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/CMAPTorsionForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/CMAPTorsionForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/CMAPTorsionForceProxy.cpp OpenMMSwigHeaders.i:839: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:867: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. [ 50%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/CMMotionRemoverProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/CMMotionRemoverProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/CMMotionRemoverProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/CMMotionRemoverProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/CMMotionRemoverProxy.cpp [ 50%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/CompoundIntegratorProxy.cpp.o OpenMMSwigHeaders.i:933: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/CompoundIntegratorProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/CompoundIntegratorProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/CompoundIntegratorProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/CompoundIntegratorProxy.cpp OpenMMSwigHeaders.i:937: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. [ 50%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/CustomAngleForceProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/CustomAngleForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/CustomAngleForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/CustomAngleForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/CustomAngleForceProxy.cpp [ 50%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/CustomBondForceProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/CustomBondForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/CustomBondForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/CustomBondForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/CustomBondForceProxy.cpp OpenMMSwigHeaders.i:1043: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. [ 50%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/CustomCVForceProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/CustomCVForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/CustomCVForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/CustomCVForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/CustomCVForceProxy.cpp [ 50%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/CustomCompoundBondForceProxy.cpp.o [ 50%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/CustomCentroidBondForceProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/CustomCentroidBondForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/CustomCentroidBondForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/CustomCentroidBondForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/CustomCentroidBondForceProxy.cpp /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/CustomCompoundBondForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/CustomCompoundBondForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/CustomCompoundBondForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/CustomCompoundBondForceProxy.cpp OpenMMSwigHeaders.i:1177: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. [ 50%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/CustomExternalForceProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/CustomExternalForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/CustomExternalForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/CustomExternalForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/CustomExternalForceProxy.cpp OpenMMSwigHeaders.i:1223: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. [ 50%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/CustomGBForceProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/CustomGBForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/CustomGBForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/CustomGBForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/CustomGBForceProxy.cpp [ 50%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/CustomHbondForceProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/CustomHbondForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/CustomHbondForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/CustomHbondForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/CustomHbondForceProxy.cpp OpenMMSwigHeaders.i:1328: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. [ 50%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/CustomIntegratorProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/CustomIntegratorProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/CustomIntegratorProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/CustomIntegratorProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/CustomIntegratorProxy.cpp [ 50%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/CustomManyParticleForceProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/CustomManyParticleForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/CustomManyParticleForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/CustomManyParticleForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/CustomManyParticleForceProxy.cpp OpenMMSwigHeaders.i:1456: Warning 453: Can't apply (std::vector< Vec3,std::allocator< Vec3 > > &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:1459: Warning 453: Can't apply (std::vector< Vec3,std::allocator< Vec3 > > &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:1462: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. [ 50%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/CustomNonbondedForceProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/CustomNonbondedForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/CustomNonbondedForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/CustomNonbondedForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/CustomNonbondedForceProxy.cpp [ 50%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/CustomTorsionForceProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/CustomTorsionForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/CustomTorsionForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/CustomTorsionForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/CustomTorsionForceProxy.cpp OpenMMSwigHeaders.i:1517: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:1532: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. [ 52%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/GBSAOBCForceProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/GBSAOBCForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/GBSAOBCForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/GBSAOBCForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/GBSAOBCForceProxy.cpp OpenMMSwigHeaders.i:1547: Warning 453: Can't apply (OpenMM::SerializationNode &OUTPUT). No typemaps are defined. [ 52%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/GayBerneForceProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/GayBerneForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/GayBerneForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/GayBerneForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/GayBerneForceProxy.cpp [ 52%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/HarmonicAngleForceProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/HarmonicAngleForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/HarmonicAngleForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/HarmonicAngleForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/HarmonicAngleForceProxy.cpp OpenMMSwigHeaders.i:1659: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. [ 52%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/HarmonicBondForceProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/HarmonicBondForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/HarmonicBondForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/HarmonicBondForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/HarmonicBondForceProxy.cpp [ 52%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/LangevinIntegratorProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/LangevinIntegratorProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/LangevinIntegratorProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/LangevinIntegratorProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/LangevinIntegratorProxy.cpp OpenMMSwigHeaders.i:1702: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. [ 52%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/LangevinMiddleIntegratorProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/LangevinMiddleIntegratorProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/LangevinMiddleIntegratorProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/LangevinMiddleIntegratorProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/LangevinMiddleIntegratorProxy.cpp [ 52%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/MonteCarloAnisotropicBarostatProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/MonteCarloAnisotropicBarostatProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/MonteCarloAnisotropicBarostatProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/MonteCarloAnisotropicBarostatProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/MonteCarloAnisotropicBarostatProxy.cpp OpenMMSwigHeaders.i:1813: Warning 453: Can't apply (std::vector< Vec3,std::allocator< Vec3 > > &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:1816: Warning 453: Can't apply (std::vector< Vec3,std::allocator< Vec3 > > &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:1819: Warning 453: Can't apply (std::vector< Vec3,std::allocator< Vec3 > > &OUTPUT). No typemaps are defined. [ 52%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/MonteCarloBarostatProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/MonteCarloBarostatProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/MonteCarloBarostatProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/MonteCarloBarostatProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/MonteCarloBarostatProxy.cpp [ 52%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/MonteCarloFlexibleBarostatProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/MonteCarloFlexibleBarostatProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/MonteCarloFlexibleBarostatProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/MonteCarloFlexibleBarostatProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/MonteCarloFlexibleBarostatProxy.cpp OpenMMSwigHeaders.i:1825: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:1830: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. [ 52%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/MonteCarloMembraneBarostatProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/MonteCarloMembraneBarostatProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/MonteCarloMembraneBarostatProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/MonteCarloMembraneBarostatProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/MonteCarloMembraneBarostatProxy.cpp [ 52%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/NonbondedForceProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/NonbondedForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/NonbondedForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/NonbondedForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/NonbondedForceProxy.cpp [ 52%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/NoseHooverIntegratorProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/NoseHooverIntegratorProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/NoseHooverIntegratorProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/NoseHooverIntegratorProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/NoseHooverIntegratorProxy.cpp [ 52%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/PeriodicTorsionForceProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/PeriodicTorsionForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/PeriodicTorsionForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/PeriodicTorsionForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/PeriodicTorsionForceProxy.cpp OpenMMSwigHeaders.i:1879: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. [ 52%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/RBTorsionForceProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/RBTorsionForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/RBTorsionForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/RBTorsionForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/RBTorsionForceProxy.cpp OpenMMSwigHeaders.i:1932: Warning 453: Can't apply (ContextImpl &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:1933: Warning 453: Can't apply (ContextImpl &OUTPUT). No typemaps are defined. [ 52%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/RMSDForceProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/RMSDForceProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/RMSDForceProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/RMSDForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/RMSDForceProxy.cpp OpenMMSwigHeaders.i:2021: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. [ 52%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/SerializationNode.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/SerializationNode.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/SerializationNode.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/SerializationNode.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/SerializationNode.cpp [ 52%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/SerializationProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 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CMakeFiles/OpenMM.dir/serialization/src/SerializationProxyRegistration.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include 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-fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/SerializationProxyRegistration.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/SerializationProxyRegistration.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/SerializationProxyRegistration.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/SerializationProxyRegistration.cpp [ 52%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/StateProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include 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CMakeFiles/OpenMM.dir/serialization/src/SystemProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include 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-fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/SystemProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/SystemProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/SystemProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/SystemProxy.cpp [ 54%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/TabulatedFunctionProxies.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include 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-fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/TabulatedFunctionProxies.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/TabulatedFunctionProxies.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/TabulatedFunctionProxies.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/TabulatedFunctionProxies.cpp [ 54%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/VariableLangevinIntegratorProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/VariableLangevinIntegratorProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/VariableLangevinIntegratorProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/VariableLangevinIntegratorProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/VariableLangevinIntegratorProxy.cpp [ 54%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/VariableVerletIntegratorProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include 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-I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/VariableVerletIntegratorProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/VariableVerletIntegratorProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/VariableVerletIntegratorProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/VariableVerletIntegratorProxy.cpp [ 54%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/VerletIntegratorProxy.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/VerletIntegratorProxy.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/VerletIntegratorProxy.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/VerletIntegratorProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/VerletIntegratorProxy.cpp OpenMMSwigHeaders.i:2155: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. [ 54%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/XmlSerializer.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/XmlSerializer.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/XmlSerializer.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/XmlSerializer.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/XmlSerializer.cpp OpenMMSwigHeaders.i:2210: Warning 453: Can't apply (ContextImpl &OUTPUT). No typemaps are defined. [ 54%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/dtoa.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/dtoa.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/dtoa.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/dtoa.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/dtoa.cpp OpenMMSwigHeaders.i:2313: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:2343: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. [ 54%] Building CXX object CMakeFiles/OpenMM.dir/serialization/src/g_fmt.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -DOPENMM_BUILDING_SHARED_LIBRARY -DIEEE_8087 -MD -MT CMakeFiles/OpenMM.dir/serialization/src/g_fmt.cpp.o -MF CMakeFiles/OpenMM.dir/serialization/src/g_fmt.cpp.o.d -o CMakeFiles/OpenMM.dir/serialization/src/g_fmt.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/g_fmt.cpp /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/dtoa.cpp: In function 'double strtod2(const char*, char**)': /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/dtoa.cpp:2650:46: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] 2650 | if (match(&s,"nf")) { | ^~~~ /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/dtoa.cpp:2652:55: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] 2652 | if (!match(&s,"inity")) | ^~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/dtoa.cpp:2661:47: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] 2661 | if (match(&s, "an")) { | ^~~~ [ 54%] Building CXX object CMakeFiles/OpenMM.dir/libraries/irrxml/src/irrXML.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/irrxml/src/irrXML.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/irrxml/src/irrXML.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/irrxml/src/irrXML.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/src/irrXML.cpp /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/dtoa.cpp: In function 'char* dtoa(double, int, int, int*, int*, char**)': /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/dtoa.cpp:3725:42: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] 3725 | return nrv_alloc("Infinity", rve, 8); | ^~~~~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/dtoa.cpp:3727:34: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] 3727 | return nrv_alloc("NaN", rve, 3); | ^~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/serialization/src/dtoa.cpp:3735:34: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] 3735 | return nrv_alloc("0", rve, 1); | ^~~ [ 54%] Building CXX object CMakeFiles/OpenMM.dir/libraries/vecmath/src/vecmath.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/vecmath/src/vecmath.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/vecmath/src/vecmath.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/vecmath/src/vecmath.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/src/vecmath.cpp [ 54%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64assembler.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64assembler.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64assembler.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64assembler.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/arm/a64assembler.cpp OpenMMSwigHeaders.i:2416: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. [ 54%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64builder.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64builder.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64builder.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64builder.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/arm/a64builder.cpp OpenMMSwigHeaders.i:2490: Warning 453: Can't apply (std::vector< Vec3,std::allocator< Vec3 > > &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:2493: Warning 453: Can't apply (std::vector< Vec3,std::allocator< Vec3 > > &OUTPUT). No typemaps are defined. [ 54%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64compiler.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64compiler.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64compiler.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64compiler.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/arm/a64compiler.cpp [ 54%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64emithelper.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64emithelper.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64emithelper.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64emithelper.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/arm/a64emithelper.cpp ./swig_lib/python/extend.i:414: Warning 509: Overloaded method OpenMM::CustomIntegrator::getPerDofVariable(int) const effectively ignored, OpenMMSwigHeaders.i:2491: Warning 509: as it is shadowed by OpenMM::CustomIntegrator::getPerDofVariable(int,std::vector< Vec3,std::allocator< Vec3 > > &) const. [ 54%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64formatter.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64formatter.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64formatter.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64formatter.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/arm/a64formatter.cpp OpenMMSwigHeaders.i:2537: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:2677: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. [ 54%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64func.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64func.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64func.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64func.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/arm/a64func.cpp OpenMMSwigHeaders.i:2709: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:2714: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:2717: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. OpenMMSwigHeaders.i:2770: Warning 453: Can't apply (OpenMM::Context &OUTPUT). No typemaps are defined. [ 54%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64instapi.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 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-fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64instdb.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64instdb.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64instdb.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/arm/a64instdb.cpp [ 54%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64operand.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 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CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64operand.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64operand.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64operand.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/arm/a64operand.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 54%] Built target BuildModule [ 54%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64rapass.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include 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-fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64rapass.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64rapass.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/a64rapass.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/arm/a64rapass.cpp [ 56%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/armformatter.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 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CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/armformatter.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/armformatter.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/arm/armformatter.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/arm/armformatter.cpp [ 56%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/archtraits.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include 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-D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/archtraits.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/archtraits.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/archtraits.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/archtraits.cpp [ 56%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/builder.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include 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-fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/assembler.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/assembler.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/assembler.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/assembler.cpp [ 56%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/codeholder.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include 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-I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/codeholder.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/codeholder.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/codeholder.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/codeholder.cpp [ 56%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/codewriter.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include 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-Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/codewriter.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/codewriter.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/codewriter.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/codewriter.cpp [ 56%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/compiler.cpp.o [ 56%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/constpool.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit 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-Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/constpool.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/constpool.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/constpool.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/constpool.cpp [ 56%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/cpuinfo.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include 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-I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/cpuinfo.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/cpuinfo.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/cpuinfo.cpp.o -c 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-I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/emithelper.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/emithelper.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/emithelper.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/emithelper.cpp [ 56%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/emitterutils.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/emitterutils.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/emitterutils.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/emitterutils.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/emitterutils.cpp [ 56%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/environment.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include 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-I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/environment.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/environment.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/environment.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/environment.cpp [ 56%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/errorhandler.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/errorhandler.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/errorhandler.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/errorhandler.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/errorhandler.cpp [ 56%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/formatter.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/formatter.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/formatter.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/formatter.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/formatter.cpp [ 56%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/funcargscontext.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/funcargscontext.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/funcargscontext.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/funcargscontext.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/funcargscontext.cpp [ 56%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/func.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/func.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/func.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/func.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/func.cpp [ 56%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/globals.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/globals.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/globals.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/globals.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/globals.cpp [ 56%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/jitallocator.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/jitallocator.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/jitallocator.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/jitallocator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/jitallocator.cpp [ 56%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/inst.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/inst.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/inst.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/inst.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/inst.cpp [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/jitruntime.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/jitruntime.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/jitruntime.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/jitruntime.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/jitruntime.cpp [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/logger.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/logger.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/logger.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/logger.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/logger.cpp [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/operand.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/operand.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/operand.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/operand.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/operand.cpp [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/osutils.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/osutils.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/osutils.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/osutils.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/osutils.cpp [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/ralocal.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/ralocal.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/ralocal.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/ralocal.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/ralocal.cpp [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/rapass.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/rapass.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/rapass.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/rapass.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/rapass.cpp [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/rastack.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/rastack.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/rastack.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/rastack.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/rastack.cpp [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/string.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/string.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/string.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/string.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/string.cpp [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/support.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/support.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/support.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/support.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/support.cpp [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/target.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/target.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/target.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/target.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/target.cpp [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/type.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/type.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/type.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/type.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/type.cpp [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/virtmem.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/virtmem.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/virtmem.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/virtmem.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/virtmem.cpp [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zone.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zone.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zone.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zone.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/zone.cpp [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonehash.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonehash.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonehash.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonehash.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/zonehash.cpp [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonelist.cpp.o [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonestack.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonelist.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonelist.cpp.o.d 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-I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonestack.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonestack.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonestack.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/zonestack.cpp [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonetree.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonetree.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonetree.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonetree.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/zonetree.cpp [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonevector.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonevector.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonevector.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/core/zonevector.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/core/zonevector.cpp [ 58%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86assembler.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include 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-I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86assembler.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86assembler.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86assembler.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/x86/x86assembler.cpp [ 60%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86builder.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86builder.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86builder.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86builder.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/x86/x86builder.cpp [ 60%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86compiler.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86compiler.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86compiler.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86compiler.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/x86/x86compiler.cpp [ 60%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86emithelper.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86emithelper.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86emithelper.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86emithelper.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit/asmjit/x86/x86emithelper.cpp [ 60%] Building CXX object CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86formatter.cpp.o /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMM_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include 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-I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -DPTHREAD_BUILDING_SHARED_LIBRARY -MD -MT CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86formatter.cpp.o -MF CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86formatter.cpp.o.d -o CMakeFiles/OpenMM.dir/libraries/asmjit/asmjit/x86/x86formatter.cpp.o -c 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/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceCustomAngleForce.dir/DependInfo.cmake "--color=" make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomBondForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomBondForce.dir/depend make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomCPPForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomCPPForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceCustomBondForce.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceCustomCPPForce.dir/DependInfo.cmake "--color=" make -f platforms/reference/tests/CMakeFiles/TestReferenceATMForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceATMForce.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceAndersenThermostat.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceAndersenThermostat.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceBrownianIntegrator.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceBrownianIntegrator.dir/build make -f platforms/reference/tests/CMakeFiles/TestReferenceCheckpoints.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCheckpoints.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceCMAPTorsionForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCMAPTorsionForce.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceCMMotionRemover.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCMMotionRemover.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceCompoundIntegrator.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCompoundIntegrator.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceATMForce.dir/TestReferenceATMForce.cpp.o make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomAngleForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomAngleForce.dir/build cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceATMForce.dir/TestReferenceATMForce.cpp.o -MF CMakeFiles/TestReferenceATMForce.dir/TestReferenceATMForce.cpp.o.d -o CMakeFiles/TestReferenceATMForce.dir/TestReferenceATMForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceATMForce.cpp make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomBondForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomBondForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomCPPForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomCPPForce.dir/build [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceBrownianIntegrator.dir/TestReferenceBrownianIntegrator.cpp.o [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceAndersenThermostat.dir/TestReferenceAndersenThermostat.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceBrownianIntegrator.dir/TestReferenceBrownianIntegrator.cpp.o -MF CMakeFiles/TestReferenceBrownianIntegrator.dir/TestReferenceBrownianIntegrator.cpp.o.d -o CMakeFiles/TestReferenceBrownianIntegrator.dir/TestReferenceBrownianIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceBrownianIntegrator.cpp make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomCVForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomCVForce.dir/depend cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceAndersenThermostat.dir/TestReferenceAndersenThermostat.cpp.o -MF CMakeFiles/TestReferenceAndersenThermostat.dir/TestReferenceAndersenThermostat.cpp.o.d -o CMakeFiles/TestReferenceAndersenThermostat.dir/TestReferenceAndersenThermostat.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceAndersenThermostat.cpp make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceCheckpoints.dir/TestReferenceCheckpoints.cpp.o [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceCMMotionRemover.dir/TestReferenceCMMotionRemover.cpp.o make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomCentroidBondForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomCentroidBondForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceCustomCentroidBondForce.dir/DependInfo.cmake "--color=" make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomCompoundBondForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomCompoundBondForce.dir/depend [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceCMAPTorsionForce.dir/TestReferenceCMAPTorsionForce.cpp.o make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceCustomCVForce.dir/DependInfo.cmake "--color=" make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomExternalForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomExternalForce.dir/depend cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceCheckpoints.dir/TestReferenceCheckpoints.cpp.o -MF CMakeFiles/TestReferenceCheckpoints.dir/TestReferenceCheckpoints.cpp.o.d -o CMakeFiles/TestReferenceCheckpoints.dir/TestReferenceCheckpoints.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceCheckpoints.cpp make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceCustomCompoundBondForce.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceCMAPTorsionForce.dir/TestReferenceCMAPTorsionForce.cpp.o -MF CMakeFiles/TestReferenceCMAPTorsionForce.dir/TestReferenceCMAPTorsionForce.cpp.o.d -o CMakeFiles/TestReferenceCMAPTorsionForce.dir/TestReferenceCMAPTorsionForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceCMAPTorsionForce.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceCMMotionRemover.dir/TestReferenceCMMotionRemover.cpp.o -MF CMakeFiles/TestReferenceCMMotionRemover.dir/TestReferenceCMMotionRemover.cpp.o.d -o CMakeFiles/TestReferenceCMMotionRemover.dir/TestReferenceCMMotionRemover.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceCMMotionRemover.cpp [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceCustomBondForce.dir/TestReferenceCustomBondForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceCustomBondForce.dir/TestReferenceCustomBondForce.cpp.o -MF CMakeFiles/TestReferenceCustomBondForce.dir/TestReferenceCustomBondForce.cpp.o.d -o CMakeFiles/TestReferenceCustomBondForce.dir/TestReferenceCustomBondForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceCustomBondForce.cpp make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceCustomExternalForce.dir/DependInfo.cmake "--color=" make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomGBForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomGBForce.dir/depend [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceCustomAngleForce.dir/TestReferenceCustomAngleForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceCustomAngleForce.dir/TestReferenceCustomAngleForce.cpp.o -MF CMakeFiles/TestReferenceCustomAngleForce.dir/TestReferenceCustomAngleForce.cpp.o.d -o CMakeFiles/TestReferenceCustomAngleForce.dir/TestReferenceCustomAngleForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceCustomAngleForce.cpp [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceCompoundIntegrator.dir/TestReferenceCompoundIntegrator.cpp.o make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceCustomGBForce.dir/DependInfo.cmake "--color=" make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomHbondForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomHbondForce.dir/depend cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceCompoundIntegrator.dir/TestReferenceCompoundIntegrator.cpp.o -MF CMakeFiles/TestReferenceCompoundIntegrator.dir/TestReferenceCompoundIntegrator.cpp.o.d -o CMakeFiles/TestReferenceCompoundIntegrator.dir/TestReferenceCompoundIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceCompoundIntegrator.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceCustomCPPForce.dir/TestReferenceCustomCPPForce.cpp.o make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomCentroidBondForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomCentroidBondForce.dir/build cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceCustomHbondForce.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceCustomCPPForce.dir/TestReferenceCustomCPPForce.cpp.o -MF CMakeFiles/TestReferenceCustomCPPForce.dir/TestReferenceCustomCPPForce.cpp.o.d -o CMakeFiles/TestReferenceCustomCPPForce.dir/TestReferenceCustomCPPForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceCustomCPPForce.cpp make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomCompoundBondForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomCompoundBondForce.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomCVForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomCVForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomIntegrator.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomIntegrator.dir/depend make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceCustomIntegrator.dir/DependInfo.cmake "--color=" make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomExternalForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomExternalForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomManyParticleForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomManyParticleForce.dir/depend make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomGBForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomGBForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceCustomManyParticleForce.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomNonbondedForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomNonbondedForce.dir/depend [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceCustomCVForce.dir/TestReferenceCustomCVForce.cpp.o make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceCustomNonbondedForce.dir/DependInfo.cmake "--color=" make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomHbondForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomHbondForce.dir/build cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceCustomCVForce.dir/TestReferenceCustomCVForce.cpp.o -MF CMakeFiles/TestReferenceCustomCVForce.dir/TestReferenceCustomCVForce.cpp.o.d -o CMakeFiles/TestReferenceCustomCVForce.dir/TestReferenceCustomCVForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceCustomCVForce.cpp [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceCustomExternalForce.dir/TestReferenceCustomExternalForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceCustomExternalForce.dir/TestReferenceCustomExternalForce.cpp.o -MF CMakeFiles/TestReferenceCustomExternalForce.dir/TestReferenceCustomExternalForce.cpp.o.d -o CMakeFiles/TestReferenceCustomExternalForce.dir/TestReferenceCustomExternalForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceCustomExternalForce.cpp make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomTorsionForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomTorsionForce.dir/depend make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceCustomCentroidBondForce.dir/TestReferenceCustomCentroidBondForce.cpp.o [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceCustomGBForce.dir/TestReferenceCustomGBForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceCustomGBForce.dir/TestReferenceCustomGBForce.cpp.o -MF CMakeFiles/TestReferenceCustomGBForce.dir/TestReferenceCustomGBForce.cpp.o.d -o CMakeFiles/TestReferenceCustomGBForce.dir/TestReferenceCustomGBForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceCustomGBForce.cpp make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceCustomTorsionForce.dir/DependInfo.cmake "--color=" make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomIntegrator.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomIntegrator.dir/build cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceCustomCentroidBondForce.dir/TestReferenceCustomCentroidBondForce.cpp.o -MF CMakeFiles/TestReferenceCustomCentroidBondForce.dir/TestReferenceCustomCentroidBondForce.cpp.o.d -o CMakeFiles/TestReferenceCustomCentroidBondForce.dir/TestReferenceCustomCentroidBondForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceCustomCentroidBondForce.cpp make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceCustomHbondForce.dir/TestReferenceCustomHbondForce.cpp.o [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceCustomCompoundBondForce.dir/TestReferenceCustomCompoundBondForce.cpp.o make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomNonbondedForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomNonbondedForce.dir/build cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceCustomHbondForce.dir/TestReferenceCustomHbondForce.cpp.o -MF CMakeFiles/TestReferenceCustomHbondForce.dir/TestReferenceCustomHbondForce.cpp.o.d -o CMakeFiles/TestReferenceCustomHbondForce.dir/TestReferenceCustomHbondForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceCustomHbondForce.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceCustomCompoundBondForce.dir/TestReferenceCustomCompoundBondForce.cpp.o -MF CMakeFiles/TestReferenceCustomCompoundBondForce.dir/TestReferenceCustomCompoundBondForce.cpp.o.d -o CMakeFiles/TestReferenceCustomCompoundBondForce.dir/TestReferenceCustomCompoundBondForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceCustomCompoundBondForce.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceCustomIntegrator.dir/TestReferenceCustomIntegrator.cpp.o make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomManyParticleForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomManyParticleForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceCustomIntegrator.dir/TestReferenceCustomIntegrator.cpp.o -MF CMakeFiles/TestReferenceCustomIntegrator.dir/TestReferenceCustomIntegrator.cpp.o.d -o CMakeFiles/TestReferenceCustomIntegrator.dir/TestReferenceCustomIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceCustomIntegrator.cpp make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceCustomTorsionForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceCustomTorsionForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceCustomNonbondedForce.dir/TestReferenceCustomNonbondedForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceCustomNonbondedForce.dir/TestReferenceCustomNonbondedForce.cpp.o -MF CMakeFiles/TestReferenceCustomNonbondedForce.dir/TestReferenceCustomNonbondedForce.cpp.o.d -o CMakeFiles/TestReferenceCustomNonbondedForce.dir/TestReferenceCustomNonbondedForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceCustomNonbondedForce.cpp [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceCustomManyParticleForce.dir/TestReferenceCustomManyParticleForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceCustomManyParticleForce.dir/TestReferenceCustomManyParticleForce.cpp.o -MF CMakeFiles/TestReferenceCustomManyParticleForce.dir/TestReferenceCustomManyParticleForce.cpp.o.d -o CMakeFiles/TestReferenceCustomManyParticleForce.dir/TestReferenceCustomManyParticleForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceCustomManyParticleForce.cpp [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceCustomTorsionForce.dir/TestReferenceCustomTorsionForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceCustomTorsionForce.dir/TestReferenceCustomTorsionForce.cpp.o -MF CMakeFiles/TestReferenceCustomTorsionForce.dir/TestReferenceCustomTorsionForce.cpp.o.d -o CMakeFiles/TestReferenceCustomTorsionForce.dir/TestReferenceCustomTorsionForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceCustomTorsionForce.cpp [ 60%] Linking CXX executable ../../../TestReferenceCMMotionRemover cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceCMMotionRemover.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceCMMotionRemover.dir/TestReferenceCMMotionRemover.cpp.o -o ../../../TestReferenceCMMotionRemover -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 60%] Linking CXX executable ../../../TestReferenceAndersenThermostat cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceAndersenThermostat.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceAndersenThermostat.dir/TestReferenceAndersenThermostat.cpp.o -o ../../../TestReferenceAndersenThermostat -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 60%] Built target TestReferenceCMMotionRemover make -f platforms/reference/tests/CMakeFiles/TestReferenceDispersionPME.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceDispersionPME.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceDispersionPME.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceDispersionPME.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceDispersionPME.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceDispersionPME.dir/TestReferenceDispersionPME.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceDispersionPME.dir/TestReferenceDispersionPME.cpp.o -MF CMakeFiles/TestReferenceDispersionPME.dir/TestReferenceDispersionPME.cpp.o.d -o CMakeFiles/TestReferenceDispersionPME.dir/TestReferenceDispersionPME.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceDispersionPME.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 60%] Built target TestReferenceAndersenThermostat make -f platforms/reference/tests/CMakeFiles/TestReferenceEwald.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceEwald.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceEwald.dir/DependInfo.cmake "--color=" [ 60%] Linking CXX executable ../../../TestReferenceCMAPTorsionForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceCMAPTorsionForce.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceEwald.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceEwald.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceCMAPTorsionForce.dir/TestReferenceCMAPTorsionForce.cpp.o -o ../../../TestReferenceCMAPTorsionForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceEwald.dir/TestReferenceEwald.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceEwald.dir/TestReferenceEwald.cpp.o -MF CMakeFiles/TestReferenceEwald.dir/TestReferenceEwald.cpp.o.d -o CMakeFiles/TestReferenceEwald.dir/TestReferenceEwald.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceEwald.cpp [ 60%] Linking CXX executable ../../../TestReferenceCustomCPPForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceCustomCPPForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceCustomCPPForce.dir/TestReferenceCustomCPPForce.cpp.o -o ../../../TestReferenceCustomCPPForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 60%] Linking CXX executable ../../../TestReferenceCompoundIntegrator cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceCompoundIntegrator.dir/link.txt --verbose=1 [ 60%] Built target TestReferenceCMAPTorsionForce make -f platforms/reference/tests/CMakeFiles/TestReferenceGBSAOBCForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceGBSAOBCForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceGBSAOBCForce.dir/DependInfo.cmake "--color=" /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceCompoundIntegrator.dir/TestReferenceCompoundIntegrator.cpp.o -o ../../../TestReferenceCompoundIntegrator -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceGBSAOBCForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceGBSAOBCForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceGBSAOBCForce.dir/TestReferenceGBSAOBCForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceGBSAOBCForce.dir/TestReferenceGBSAOBCForce.cpp.o -MF CMakeFiles/TestReferenceGBSAOBCForce.dir/TestReferenceGBSAOBCForce.cpp.o.d -o CMakeFiles/TestReferenceGBSAOBCForce.dir/TestReferenceGBSAOBCForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceGBSAOBCForce.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 60%] Built target TestReferenceCustomCPPForce make -f platforms/reference/tests/CMakeFiles/TestReferenceGayBerneForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceGayBerneForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceGayBerneForce.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceGayBerneForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceGayBerneForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 60%] Linking CXX executable ../../../TestReferenceBrownianIntegrator cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceBrownianIntegrator.dir/link.txt --verbose=1 [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceGayBerneForce.dir/TestReferenceGayBerneForce.cpp.o /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceBrownianIntegrator.dir/TestReferenceBrownianIntegrator.cpp.o -o ../../../TestReferenceBrownianIntegrator -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceGayBerneForce.dir/TestReferenceGayBerneForce.cpp.o -MF CMakeFiles/TestReferenceGayBerneForce.dir/TestReferenceGayBerneForce.cpp.o.d -o CMakeFiles/TestReferenceGayBerneForce.dir/TestReferenceGayBerneForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceGayBerneForce.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 60%] Built target TestReferenceCompoundIntegrator make -f platforms/reference/tests/CMakeFiles/TestReferenceHarmonicAngleForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceHarmonicAngleForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceHarmonicAngleForce.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceHarmonicAngleForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceHarmonicAngleForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 60%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceHarmonicAngleForce.dir/TestReferenceHarmonicAngleForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceHarmonicAngleForce.dir/TestReferenceHarmonicAngleForce.cpp.o -MF CMakeFiles/TestReferenceHarmonicAngleForce.dir/TestReferenceHarmonicAngleForce.cpp.o.d -o CMakeFiles/TestReferenceHarmonicAngleForce.dir/TestReferenceHarmonicAngleForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceHarmonicAngleForce.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 60%] Built target TestReferenceBrownianIntegrator make -f platforms/reference/tests/CMakeFiles/TestReferenceHarmonicBondForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceHarmonicBondForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceHarmonicBondForce.dir/DependInfo.cmake "--color=" [ 62%] Linking CXX executable ../../../TestReferenceCheckpoints cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceCheckpoints.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceCheckpoints.dir/TestReferenceCheckpoints.cpp.o -o ../../../TestReferenceCheckpoints -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceHarmonicBondForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceHarmonicBondForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 62%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceHarmonicBondForce.dir/TestReferenceHarmonicBondForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceHarmonicBondForce.dir/TestReferenceHarmonicBondForce.cpp.o -MF CMakeFiles/TestReferenceHarmonicBondForce.dir/TestReferenceHarmonicBondForce.cpp.o.d -o CMakeFiles/TestReferenceHarmonicBondForce.dir/TestReferenceHarmonicBondForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceHarmonicBondForce.cpp [ 62%] Linking CXX executable ../../../TestReferenceCustomTorsionForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceCustomTorsionForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceCustomTorsionForce.dir/TestReferenceCustomTorsionForce.cpp.o -o ../../../TestReferenceCustomTorsionForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 62%] Linking CXX executable ../../../TestReferenceCustomAngleForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceCustomAngleForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceCustomAngleForce.dir/TestReferenceCustomAngleForce.cpp.o -o ../../../TestReferenceCustomAngleForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 62%] Built target TestReferenceCheckpoints make -f platforms/reference/tests/CMakeFiles/TestReferenceKineticEnergy.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceKineticEnergy.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceKineticEnergy.dir/DependInfo.cmake "--color=" [ 62%] Built target TestReferenceCustomTorsionForce make -f platforms/reference/tests/CMakeFiles/TestReferenceLangevinIntegrator.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceLangevinIntegrator.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceLangevinIntegrator.dir/DependInfo.cmake "--color=" [ 62%] Built target TestReferenceCustomAngleForce make -f platforms/reference/tests/CMakeFiles/TestReferenceLangevinMiddleIntegrator.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceLangevinMiddleIntegrator.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceLangevinMiddleIntegrator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceKineticEnergy.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceKineticEnergy.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceLangevinIntegrator.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceLangevinIntegrator.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceLangevinMiddleIntegrator.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceLangevinMiddleIntegrator.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 62%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceLangevinIntegrator.dir/TestReferenceLangevinIntegrator.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceLangevinIntegrator.dir/TestReferenceLangevinIntegrator.cpp.o -MF CMakeFiles/TestReferenceLangevinIntegrator.dir/TestReferenceLangevinIntegrator.cpp.o.d -o CMakeFiles/TestReferenceLangevinIntegrator.dir/TestReferenceLangevinIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceLangevinIntegrator.cpp [ 62%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceKineticEnergy.dir/TestReferenceKineticEnergy.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceKineticEnergy.dir/TestReferenceKineticEnergy.cpp.o -MF CMakeFiles/TestReferenceKineticEnergy.dir/TestReferenceKineticEnergy.cpp.o.d -o CMakeFiles/TestReferenceKineticEnergy.dir/TestReferenceKineticEnergy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceKineticEnergy.cpp [ 62%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceLangevinMiddleIntegrator.dir/TestReferenceLangevinMiddleIntegrator.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceLangevinMiddleIntegrator.dir/TestReferenceLangevinMiddleIntegrator.cpp.o -MF CMakeFiles/TestReferenceLangevinMiddleIntegrator.dir/TestReferenceLangevinMiddleIntegrator.cpp.o.d -o CMakeFiles/TestReferenceLangevinMiddleIntegrator.dir/TestReferenceLangevinMiddleIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceLangevinMiddleIntegrator.cpp [ 62%] Linking CXX executable ../../../TestReferenceCustomBondForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceCustomBondForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceCustomBondForce.dir/TestReferenceCustomBondForce.cpp.o -o ../../../TestReferenceCustomBondForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 62%] Built target TestReferenceCustomBondForce make -f platforms/reference/tests/CMakeFiles/TestReferenceLocalEnergyMinimizer.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceLocalEnergyMinimizer.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceLocalEnergyMinimizer.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceLocalEnergyMinimizer.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceLocalEnergyMinimizer.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 62%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceLocalEnergyMinimizer.dir/TestReferenceLocalEnergyMinimizer.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceLocalEnergyMinimizer.dir/TestReferenceLocalEnergyMinimizer.cpp.o -MF CMakeFiles/TestReferenceLocalEnergyMinimizer.dir/TestReferenceLocalEnergyMinimizer.cpp.o.d -o CMakeFiles/TestReferenceLocalEnergyMinimizer.dir/TestReferenceLocalEnergyMinimizer.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceLocalEnergyMinimizer.cpp [ 62%] Linking CXX executable ../../../TestReferenceCustomExternalForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceCustomExternalForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceCustomExternalForce.dir/TestReferenceCustomExternalForce.cpp.o -o ../../../TestReferenceCustomExternalForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 62%] Built target TestReferenceCustomExternalForce make -f platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloAnisotropicBarostat.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloAnisotropicBarostat.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloAnisotropicBarostat.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloAnisotropicBarostat.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloAnisotropicBarostat.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 64%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloAnisotropicBarostat.dir/TestReferenceMonteCarloAnisotropicBarostat.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloAnisotropicBarostat.dir/TestReferenceMonteCarloAnisotropicBarostat.cpp.o -MF CMakeFiles/TestReferenceMonteCarloAnisotropicBarostat.dir/TestReferenceMonteCarloAnisotropicBarostat.cpp.o.d -o CMakeFiles/TestReferenceMonteCarloAnisotropicBarostat.dir/TestReferenceMonteCarloAnisotropicBarostat.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceMonteCarloAnisotropicBarostat.cpp [ 64%] Linking CXX executable ../../../TestReferenceHarmonicAngleForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceHarmonicAngleForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceHarmonicAngleForce.dir/TestReferenceHarmonicAngleForce.cpp.o -o ../../../TestReferenceHarmonicAngleForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 64%] Linking CXX executable ../../../TestReferenceKineticEnergy cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceKineticEnergy.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceKineticEnergy.dir/TestReferenceKineticEnergy.cpp.o -o ../../../TestReferenceKineticEnergy -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 64%] Linking CXX executable ../../../TestReferenceCustomCVForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceCustomCVForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceCustomCVForce.dir/TestReferenceCustomCVForce.cpp.o -o ../../../TestReferenceCustomCVForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 64%] Linking CXX executable ../../../TestReferenceCustomCompoundBondForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceCustomCompoundBondForce.dir/link.txt --verbose=1 [ 64%] Built target TestReferenceHarmonicAngleForce make -f platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloBarostat.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloBarostat.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloBarostat.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceCustomCompoundBondForce.dir/TestReferenceCustomCompoundBondForce.cpp.o -o ../../../TestReferenceCustomCompoundBondForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 64%] Built target TestReferenceKineticEnergy make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloBarostat.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloBarostat.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloFlexibleBarostat.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloFlexibleBarostat.dir/depend [ 64%] Built target TestReferenceCustomCVForce make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloFlexibleBarostat.dir/DependInfo.cmake "--color=" make -f platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloMembraneBarostat.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloMembraneBarostat.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloMembraneBarostat.dir/DependInfo.cmake "--color=" [ 64%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloBarostat.dir/TestReferenceMonteCarloBarostat.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloBarostat.dir/TestReferenceMonteCarloBarostat.cpp.o -MF CMakeFiles/TestReferenceMonteCarloBarostat.dir/TestReferenceMonteCarloBarostat.cpp.o.d -o CMakeFiles/TestReferenceMonteCarloBarostat.dir/TestReferenceMonteCarloBarostat.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceMonteCarloBarostat.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloMembraneBarostat.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloMembraneBarostat.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloFlexibleBarostat.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloFlexibleBarostat.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 64%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloFlexibleBarostat.dir/TestReferenceMonteCarloFlexibleBarostat.cpp.o [ 64%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloMembraneBarostat.dir/TestReferenceMonteCarloMembraneBarostat.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloFlexibleBarostat.dir/TestReferenceMonteCarloFlexibleBarostat.cpp.o -MF CMakeFiles/TestReferenceMonteCarloFlexibleBarostat.dir/TestReferenceMonteCarloFlexibleBarostat.cpp.o.d -o CMakeFiles/TestReferenceMonteCarloFlexibleBarostat.dir/TestReferenceMonteCarloFlexibleBarostat.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceMonteCarloFlexibleBarostat.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceMonteCarloMembraneBarostat.dir/TestReferenceMonteCarloMembraneBarostat.cpp.o -MF CMakeFiles/TestReferenceMonteCarloMembraneBarostat.dir/TestReferenceMonteCarloMembraneBarostat.cpp.o.d -o CMakeFiles/TestReferenceMonteCarloMembraneBarostat.dir/TestReferenceMonteCarloMembraneBarostat.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceMonteCarloMembraneBarostat.cpp [ 66%] Linking CXX executable ../../../TestReferenceCustomHbondForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceCustomHbondForce.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceCustomHbondForce.dir/TestReferenceCustomHbondForce.cpp.o -o ../../../TestReferenceCustomHbondForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 66%] Built target TestReferenceCustomCompoundBondForce make -f platforms/reference/tests/CMakeFiles/TestReferenceNeighborList.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceNeighborList.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceNeighborList.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceNeighborList.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceNeighborList.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 66%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceNeighborList.dir/TestReferenceNeighborList.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceNeighborList.dir/TestReferenceNeighborList.cpp.o -MF CMakeFiles/TestReferenceNeighborList.dir/TestReferenceNeighborList.cpp.o.d -o CMakeFiles/TestReferenceNeighborList.dir/TestReferenceNeighborList.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceNeighborList.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 66%] Linking CXX executable ../../../TestReferenceCustomCentroidBondForce [ 66%] Built target TestReferenceCustomHbondForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceCustomCentroidBondForce.dir/link.txt --verbose=1 make -f platforms/reference/tests/CMakeFiles/TestReferenceNonbondedForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceNonbondedForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceNonbondedForce.dir/DependInfo.cmake "--color=" [ 66%] Linking CXX executable ../../../TestReferenceATMForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceATMForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceCustomCentroidBondForce.dir/TestReferenceCustomCentroidBondForce.cpp.o -o ../../../TestReferenceCustomCentroidBondForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceNonbondedForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceNonbondedForce.dir/build /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceATMForce.dir/TestReferenceATMForce.cpp.o -o ../../../TestReferenceATMForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 66%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceNonbondedForce.dir/TestReferenceNonbondedForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceNonbondedForce.dir/TestReferenceNonbondedForce.cpp.o -MF CMakeFiles/TestReferenceNonbondedForce.dir/TestReferenceNonbondedForce.cpp.o.d -o CMakeFiles/TestReferenceNonbondedForce.dir/TestReferenceNonbondedForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceNonbondedForce.cpp [ 66%] Linking CXX executable ../../../TestReferenceHarmonicBondForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceHarmonicBondForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceHarmonicBondForce.dir/TestReferenceHarmonicBondForce.cpp.o -o ../../../TestReferenceHarmonicBondForce -Wl,-rpath,"\$ORIGIN:" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 66%] Built target TestReferenceCustomCentroidBondForce make -f platforms/reference/tests/CMakeFiles/TestReferenceNoseHooverIntegrator.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceNoseHooverIntegrator.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceNoseHooverIntegrator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceNoseHooverIntegrator.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceNoseHooverIntegrator.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 66%] Built target TestReferenceATMForce make -f platforms/reference/tests/CMakeFiles/TestReferencePeriodicTorsionForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferencePeriodicTorsionForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferencePeriodicTorsionForce.dir/DependInfo.cmake "--color=" [ 66%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceNoseHooverIntegrator.dir/TestReferenceNoseHooverIntegrator.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceNoseHooverIntegrator.dir/TestReferenceNoseHooverIntegrator.cpp.o -MF CMakeFiles/TestReferenceNoseHooverIntegrator.dir/TestReferenceNoseHooverIntegrator.cpp.o.d -o CMakeFiles/TestReferenceNoseHooverIntegrator.dir/TestReferenceNoseHooverIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceNoseHooverIntegrator.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferencePeriodicTorsionForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferencePeriodicTorsionForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 66%] Linking CXX executable ../../../TestReferenceGayBerneForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceGayBerneForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceGayBerneForce.dir/TestReferenceGayBerneForce.cpp.o -o ../../../TestReferenceGayBerneForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 66%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferencePeriodicTorsionForce.dir/TestReferencePeriodicTorsionForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferencePeriodicTorsionForce.dir/TestReferencePeriodicTorsionForce.cpp.o -MF CMakeFiles/TestReferencePeriodicTorsionForce.dir/TestReferencePeriodicTorsionForce.cpp.o.d -o CMakeFiles/TestReferencePeriodicTorsionForce.dir/TestReferencePeriodicTorsionForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferencePeriodicTorsionForce.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 66%] Built target TestReferenceHarmonicBondForce make -f platforms/reference/tests/CMakeFiles/TestReferenceRBTorsionForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceRBTorsionForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceRBTorsionForce.dir/DependInfo.cmake "--color=" [ 66%] Linking CXX executable ../../../TestReferenceCustomManyParticleForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceCustomManyParticleForce.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceRBTorsionForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceRBTorsionForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceCustomManyParticleForce.dir/TestReferenceCustomManyParticleForce.cpp.o -o ../../../TestReferenceCustomManyParticleForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 66%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceRBTorsionForce.dir/TestReferenceRBTorsionForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceRBTorsionForce.dir/TestReferenceRBTorsionForce.cpp.o -MF CMakeFiles/TestReferenceRBTorsionForce.dir/TestReferenceRBTorsionForce.cpp.o.d -o CMakeFiles/TestReferenceRBTorsionForce.dir/TestReferenceRBTorsionForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceRBTorsionForce.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 66%] Built target TestReferenceGayBerneForce make -f platforms/reference/tests/CMakeFiles/TestReferenceRMSDForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceRMSDForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceRMSDForce.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceRMSDForce.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceRMSDForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 66%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceRMSDForce.dir/TestReferenceRMSDForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceRMSDForce.dir/TestReferenceRMSDForce.cpp.o -MF CMakeFiles/TestReferenceRMSDForce.dir/TestReferenceRMSDForce.cpp.o.d -o CMakeFiles/TestReferenceRMSDForce.dir/TestReferenceRMSDForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceRMSDForce.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 66%] Linking CXX executable ../../../TestReferenceLangevinMiddleIntegrator cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceLangevinMiddleIntegrator.dir/link.txt --verbose=1 [ 66%] Built target TestReferenceCustomManyParticleForce make -f platforms/reference/tests/CMakeFiles/TestReferenceRandom.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceRandom.dir/depend [ 66%] Linking CXX executable ../../../TestReferenceMonteCarloAnisotropicBarostat cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceMonteCarloAnisotropicBarostat.dir/link.txt --verbose=1 make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceRandom.dir/DependInfo.cmake "--color=" /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceLangevinMiddleIntegrator.dir/TestReferenceLangevinMiddleIntegrator.cpp.o -o ../../../TestReferenceLangevinMiddleIntegrator -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceMonteCarloAnisotropicBarostat.dir/TestReferenceMonteCarloAnisotropicBarostat.cpp.o -o ../../../TestReferenceMonteCarloAnisotropicBarostat -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceRandom.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceRandom.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 68%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceRandom.dir/TestReferenceRandom.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceRandom.dir/TestReferenceRandom.cpp.o -MF CMakeFiles/TestReferenceRandom.dir/TestReferenceRandom.cpp.o.d -o CMakeFiles/TestReferenceRandom.dir/TestReferenceRandom.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceRandom.cpp [ 68%] Linking CXX executable ../../../TestReferenceLangevinIntegrator cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceLangevinIntegrator.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceLangevinIntegrator.dir/TestReferenceLangevinIntegrator.cpp.o -o ../../../TestReferenceLangevinIntegrator -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 68%] Built target TestReferenceLangevinMiddleIntegrator make -f platforms/reference/tests/CMakeFiles/TestReferenceSettle.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceSettle.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceSettle.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceSettle.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceSettle.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 68%] Built target TestReferenceMonteCarloAnisotropicBarostat make -f platforms/reference/tests/CMakeFiles/TestReferenceVariableLangevinIntegrator.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceVariableLangevinIntegrator.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceVariableLangevinIntegrator.dir/DependInfo.cmake "--color=" [ 68%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceSettle.dir/TestReferenceSettle.cpp.o [ 68%] Linking CXX executable ../../../TestReferenceGBSAOBCForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceSettle.dir/TestReferenceSettle.cpp.o -MF CMakeFiles/TestReferenceSettle.dir/TestReferenceSettle.cpp.o.d -o CMakeFiles/TestReferenceSettle.dir/TestReferenceSettle.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceSettle.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceGBSAOBCForce.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceVariableLangevinIntegrator.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceVariableLangevinIntegrator.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceGBSAOBCForce.dir/TestReferenceGBSAOBCForce.cpp.o -o ../../../TestReferenceGBSAOBCForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 68%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceVariableLangevinIntegrator.dir/TestReferenceVariableLangevinIntegrator.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceVariableLangevinIntegrator.dir/TestReferenceVariableLangevinIntegrator.cpp.o -MF CMakeFiles/TestReferenceVariableLangevinIntegrator.dir/TestReferenceVariableLangevinIntegrator.cpp.o.d -o CMakeFiles/TestReferenceVariableLangevinIntegrator.dir/TestReferenceVariableLangevinIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceVariableLangevinIntegrator.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 68%] Linking CXX executable ../../../TestReferenceMonteCarloMembraneBarostat cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceMonteCarloMembraneBarostat.dir/link.txt --verbose=1 [ 68%] Built target TestReferenceLangevinIntegrator make -f platforms/reference/tests/CMakeFiles/TestReferenceVariableVerletIntegrator.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceVariableVerletIntegrator.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceVariableVerletIntegrator.dir/DependInfo.cmake "--color=" /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceMonteCarloMembraneBarostat.dir/TestReferenceMonteCarloMembraneBarostat.cpp.o -o ../../../TestReferenceMonteCarloMembraneBarostat -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceVariableVerletIntegrator.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceVariableVerletIntegrator.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 68%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceVariableVerletIntegrator.dir/TestReferenceVariableVerletIntegrator.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceVariableVerletIntegrator.dir/TestReferenceVariableVerletIntegrator.cpp.o -MF CMakeFiles/TestReferenceVariableVerletIntegrator.dir/TestReferenceVariableVerletIntegrator.cpp.o.d -o CMakeFiles/TestReferenceVariableVerletIntegrator.dir/TestReferenceVariableVerletIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceVariableVerletIntegrator.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 68%] Built target TestReferenceGBSAOBCForce make -f platforms/reference/tests/CMakeFiles/TestReferenceVerletIntegrator.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceVerletIntegrator.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceVerletIntegrator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceVerletIntegrator.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceVerletIntegrator.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 68%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceVerletIntegrator.dir/TestReferenceVerletIntegrator.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceVerletIntegrator.dir/TestReferenceVerletIntegrator.cpp.o -MF CMakeFiles/TestReferenceVerletIntegrator.dir/TestReferenceVerletIntegrator.cpp.o.d -o CMakeFiles/TestReferenceVerletIntegrator.dir/TestReferenceVerletIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceVerletIntegrator.cpp [ 68%] Linking CXX executable ../../../TestReferenceNeighborList cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceNeighborList.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceNeighborList.dir/TestReferenceNeighborList.cpp.o -o ../../../TestReferenceNeighborList -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 68%] Built target TestReferenceMonteCarloMembraneBarostat make -f platforms/reference/tests/CMakeFiles/TestReferenceVirtualSites.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceVirtualSites.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests/CMakeFiles/TestReferenceVirtualSites.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/reference/tests/CMakeFiles/TestReferenceVirtualSites.dir/build.make platforms/reference/tests/CMakeFiles/TestReferenceVirtualSites.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 68%] Linking CXX executable ../../../TestReferenceCustomGBForce [ 68%] Building CXX object platforms/reference/tests/CMakeFiles/TestReferenceVirtualSites.dir/TestReferenceVirtualSites.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/reference/tests/CMakeFiles/TestReferenceVirtualSites.dir/TestReferenceVirtualSites.cpp.o -MF CMakeFiles/TestReferenceVirtualSites.dir/TestReferenceVirtualSites.cpp.o.d -o CMakeFiles/TestReferenceVirtualSites.dir/TestReferenceVirtualSites.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests/TestReferenceVirtualSites.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceCustomGBForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceCustomGBForce.dir/TestReferenceCustomGBForce.cpp.o -o ../../../TestReferenceCustomGBForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 68%] Linking CXX executable ../../../TestReferenceMonteCarloFlexibleBarostat cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceMonteCarloFlexibleBarostat.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceMonteCarloFlexibleBarostat.dir/TestReferenceMonteCarloFlexibleBarostat.cpp.o -o ../../../TestReferenceMonteCarloFlexibleBarostat -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 68%] Built target TestReferenceNeighborList make -f platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/build.make platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 68%] Generating ../src/OpenCLKernelSources.cpp, ../src/OpenCLKernelSources.h cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/cmake -D KERNEL_SOURCE_DIR=/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -D KERNELS_CPP=/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src/OpenCLKernelSources.cpp -D KERNELS_H=/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src/OpenCLKernelSources.h -D KERNEL_SOURCE_CLASS=OpenCLKernelSources -D KERNEL_FILE_EXTENSION=cl -P /build/reproducible-path/openmm-8.1.1+dfsg/cmake_modules/EncodeKernelFiles.cmake [ 68%] Linking CXX executable ../../../TestReferenceMonteCarloBarostat cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceMonteCarloBarostat.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceMonteCarloBarostat.dir/TestReferenceMonteCarloBarostat.cpp.o -o ../../../TestReferenceMonteCarloBarostat -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/sharedTarget /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/build.make platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 68%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLArray.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLArray.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLArray.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLArray.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src/OpenCLArray.cpp [ 68%] Built target TestReferenceMonteCarloFlexibleBarostat make -f platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/build.make platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/sharedTarget /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/build.make platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/build [ 68%] Linking CXX executable ../../../TestReferenceLocalEnergyMinimizer cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceLocalEnergyMinimizer.dir/link.txt --verbose=1 make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 68%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuBondForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuBondForce.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuBondForce.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuBondForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src/CpuBondForce.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceLocalEnergyMinimizer.dir/TestReferenceLocalEnergyMinimizer.cpp.o -o ../../../TestReferenceLocalEnergyMinimizer -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 68%] Built target TestReferenceCustomGBForce make -f plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/build.make plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/DependInfo.cmake "--color=" [ 68%] Built target TestReferenceMonteCarloBarostat make -f plugins/rpmd/CMakeFiles/OpenMMRPMD.dir/build.make plugins/rpmd/CMakeFiles/OpenMMRPMD.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/CMakeFiles/OpenMMRPMD.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/build.make plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/rpmd/CMakeFiles/OpenMMRPMD.dir/build.make plugins/rpmd/CMakeFiles/OpenMMRPMD.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 68%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaGeneralizedKirkwoodForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaGeneralizedKirkwoodForce.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaGeneralizedKirkwoodForce.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaGeneralizedKirkwoodForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/src/AmoebaGeneralizedKirkwoodForce.cpp [ 68%] Building CXX object plugins/rpmd/CMakeFiles/OpenMMRPMD.dir/openmmapi/src/RPMDIntegrator.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMRPMD_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_RPMD_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/rpmd/CMakeFiles/OpenMMRPMD.dir/openmmapi/src/RPMDIntegrator.cpp.o -MF CMakeFiles/OpenMMRPMD.dir/openmmapi/src/RPMDIntegrator.cpp.o.d -o CMakeFiles/OpenMMRPMD.dir/openmmapi/src/RPMDIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/src/RPMDIntegrator.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 68%] Built target TestReferenceLocalEnergyMinimizer make -f plugins/drude/CMakeFiles/OpenMMDrude.dir/build.make plugins/drude/CMakeFiles/OpenMMDrude.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/CMakeFiles/OpenMMDrude.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/drude/CMakeFiles/OpenMMDrude.dir/build.make plugins/drude/CMakeFiles/OpenMMDrude.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 68%] Building CXX object plugins/drude/CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMDrude_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_DRUDE_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/drude/CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeForce.cpp.o -MF CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeForce.cpp.o.d -o CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/src/DrudeForce.cpp [ 68%] Linking CXX executable ../../../TestReferenceRandom cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceRandom.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceRandom.dir/TestReferenceRandom.cpp.o -o ../../../TestReferenceRandom -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 68%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaGeneralizedKirkwoodForceImpl.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaGeneralizedKirkwoodForceImpl.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaGeneralizedKirkwoodForceImpl.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaGeneralizedKirkwoodForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/src/AmoebaGeneralizedKirkwoodForceImpl.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 68%] Built target TestReferenceRandom [ 68%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomGBForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomGBForce.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomGBForce.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomGBForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src/CpuCustomGBForce.cpp [ 68%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomManyParticleForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomManyParticleForce.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomManyParticleForce.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomManyParticleForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src/CpuCustomManyParticleForce.cpp [ 68%] Linking CXX executable ../../../TestReferenceRMSDForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceRMSDForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceRMSDForce.dir/TestReferenceRMSDForce.cpp.o -o ../../../TestReferenceRMSDForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 68%] Linking CXX executable ../../../TestReferenceRBTorsionForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceRBTorsionForce.dir/link.txt --verbose=1 [ 68%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLBondedUtilities.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLBondedUtilities.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLBondedUtilities.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLBondedUtilities.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src/OpenCLBondedUtilities.cpp /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceRBTorsionForce.dir/TestReferenceRBTorsionForce.cpp.o -o ../../../TestReferenceRBTorsionForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 68%] Linking CXX executable ../../../TestReferenceSettle cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceSettle.dir/link.txt --verbose=1 [ 68%] Linking CXX executable ../../../TestReferencePeriodicTorsionForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferencePeriodicTorsionForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceSettle.dir/TestReferenceSettle.cpp.o -o ../../../TestReferenceSettle -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferencePeriodicTorsionForce.dir/TestReferencePeriodicTorsionForce.cpp.o -o ../../../TestReferencePeriodicTorsionForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 68%] Built target TestReferenceRMSDForce make -f plugins/cpupme/CMakeFiles/OpenMMPME.dir/build.make plugins/cpupme/CMakeFiles/OpenMMPME.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/plugins/cpupme /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/cpupme /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/cpupme/CMakeFiles/OpenMMPME.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 68%] Built target TestReferenceRBTorsionForce make -f plugins/cpupme/CMakeFiles/OpenMMPME.dir/build.make plugins/cpupme/CMakeFiles/OpenMMPME.dir/build make -f serialization/tests/CMakeFiles/TestSerializationNode.dir/build.make serialization/tests/CMakeFiles/TestSerializationNode.dir/depend [ 68%] Built target TestReferenceSettle make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializationNode.dir/DependInfo.cmake "--color=" make -f serialization/tests/CMakeFiles/TestSerializeATMForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeATMForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeATMForce.dir/DependInfo.cmake "--color=" [ 68%] Building CXX object plugins/cpupme/CMakeFiles/OpenMMPME.dir/src/CpuPmeKernelFactory.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/cpupme && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMPME_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/cpupme/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/cpupme/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/include/pocketfft -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_PME_BUILDING_SHARED_LIBRARY -msse4.1 -MD -MT plugins/cpupme/CMakeFiles/OpenMMPME.dir/src/CpuPmeKernelFactory.cpp.o -MF CMakeFiles/OpenMMPME.dir/src/CpuPmeKernelFactory.cpp.o.d -o CMakeFiles/OpenMMPME.dir/src/CpuPmeKernelFactory.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/cpupme/src/CpuPmeKernelFactory.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializationNode.dir/build.make serialization/tests/CMakeFiles/TestSerializationNode.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeATMForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeATMForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 68%] Building CXX object serialization/tests/CMakeFiles/TestSerializationNode.dir/TestSerializationNode.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializationNode.dir/TestSerializationNode.cpp.o -MF CMakeFiles/TestSerializationNode.dir/TestSerializationNode.cpp.o.d -o CMakeFiles/TestSerializationNode.dir/TestSerializationNode.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializationNode.cpp [ 68%] Building CXX object serialization/tests/CMakeFiles/TestSerializeATMForce.dir/TestSerializeATMForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeATMForce.dir/TestSerializeATMForce.cpp.o -MF CMakeFiles/TestSerializeATMForce.dir/TestSerializeATMForce.cpp.o.d -o CMakeFiles/TestSerializeATMForce.dir/TestSerializeATMForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeATMForce.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 68%] Built target TestReferencePeriodicTorsionForce make -f serialization/tests/CMakeFiles/TestSerializeAndersenThermostat.dir/build.make serialization/tests/CMakeFiles/TestSerializeAndersenThermostat.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeAndersenThermostat.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeAndersenThermostat.dir/build.make serialization/tests/CMakeFiles/TestSerializeAndersenThermostat.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 68%] Building CXX object serialization/tests/CMakeFiles/TestSerializeAndersenThermostat.dir/TestSerializeAndersenThermostat.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeAndersenThermostat.dir/TestSerializeAndersenThermostat.cpp.o -MF CMakeFiles/TestSerializeAndersenThermostat.dir/TestSerializeAndersenThermostat.cpp.o.d -o CMakeFiles/TestSerializeAndersenThermostat.dir/TestSerializeAndersenThermostat.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeAndersenThermostat.cpp [ 68%] Linking CXX executable ../../../TestReferenceCustomNonbondedForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceCustomNonbondedForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceCustomNonbondedForce.dir/TestReferenceCustomNonbondedForce.cpp.o -o ../../../TestReferenceCustomNonbondedForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 68%] Building CXX object plugins/drude/CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeForceImpl.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMDrude_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_DRUDE_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/drude/CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeForceImpl.cpp.o -MF CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeForceImpl.cpp.o.d -o CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/src/DrudeForceImpl.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 68%] Built target TestReferenceCustomNonbondedForce make -f serialization/tests/CMakeFiles/TestSerializeCMAPTorsion.dir/build.make serialization/tests/CMakeFiles/TestSerializeCMAPTorsion.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 68%] Linking CXX executable ../../../TestReferenceCustomIntegrator cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeCMAPTorsion.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceCustomIntegrator.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceCustomIntegrator.dir/TestReferenceCustomIntegrator.cpp.o -o ../../../TestReferenceCustomIntegrator -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make -f serialization/tests/CMakeFiles/TestSerializeCMAPTorsion.dir/build.make serialization/tests/CMakeFiles/TestSerializeCMAPTorsion.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 68%] Building CXX object serialization/tests/CMakeFiles/TestSerializeCMAPTorsion.dir/TestSerializeCMAPTorsion.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeCMAPTorsion.dir/TestSerializeCMAPTorsion.cpp.o -MF CMakeFiles/TestSerializeCMAPTorsion.dir/TestSerializeCMAPTorsion.cpp.o.d -o CMakeFiles/TestSerializeCMAPTorsion.dir/TestSerializeCMAPTorsion.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeCMAPTorsion.cpp [ 68%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaMultipoleForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaMultipoleForce.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaMultipoleForce.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaMultipoleForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/src/AmoebaMultipoleForce.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 68%] Linking CXX executable ../../../TestReferenceVariableLangevinIntegrator cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceVariableLangevinIntegrator.dir/link.txt --verbose=1 [ 68%] Built target TestReferenceCustomIntegrator make -f serialization/tests/CMakeFiles/TestSerializeCMMotionRemover.dir/build.make serialization/tests/CMakeFiles/TestSerializeCMMotionRemover.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeCMMotionRemover.dir/DependInfo.cmake "--color=" /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceVariableLangevinIntegrator.dir/TestReferenceVariableLangevinIntegrator.cpp.o -o ../../../TestReferenceVariableLangevinIntegrator -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeCMMotionRemover.dir/build.make serialization/tests/CMakeFiles/TestSerializeCMMotionRemover.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 68%] Building CXX object serialization/tests/CMakeFiles/TestSerializeCMMotionRemover.dir/TestSerializeCMMotionRemover.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeCMMotionRemover.dir/TestSerializeCMMotionRemover.cpp.o -MF CMakeFiles/TestSerializeCMMotionRemover.dir/TestSerializeCMMotionRemover.cpp.o.d -o CMakeFiles/TestSerializeCMMotionRemover.dir/TestSerializeCMMotionRemover.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeCMMotionRemover.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 68%] Built target TestReferenceVariableLangevinIntegrator make -f serialization/tests/CMakeFiles/TestSerializeCustomAngleForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomAngleForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeCustomAngleForce.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeCustomAngleForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomAngleForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 68%] Linking CXX executable ../../../TestReferenceVariableVerletIntegrator cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceVariableVerletIntegrator.dir/link.txt --verbose=1 [ 68%] Building CXX object serialization/tests/CMakeFiles/TestSerializeCustomAngleForce.dir/TestSerializeCustomAngleForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeCustomAngleForce.dir/TestSerializeCustomAngleForce.cpp.o -MF CMakeFiles/TestSerializeCustomAngleForce.dir/TestSerializeCustomAngleForce.cpp.o.d -o CMakeFiles/TestSerializeCustomAngleForce.dir/TestSerializeCustomAngleForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeCustomAngleForce.cpp /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceVariableVerletIntegrator.dir/TestReferenceVariableVerletIntegrator.cpp.o -o ../../../TestReferenceVariableVerletIntegrator -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 68%] Built target TestReferenceVariableVerletIntegrator make -f serialization/tests/CMakeFiles/TestSerializeCustomBondForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomBondForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeCustomBondForce.dir/DependInfo.cmake "--color=" [ 70%] Building CXX object plugins/rpmd/CMakeFiles/OpenMMRPMD.dir/openmmapi/src/RPMDMonteCarloBarostat.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMRPMD_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_RPMD_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/rpmd/CMakeFiles/OpenMMRPMD.dir/openmmapi/src/RPMDMonteCarloBarostat.cpp.o -MF CMakeFiles/OpenMMRPMD.dir/openmmapi/src/RPMDMonteCarloBarostat.cpp.o.d -o CMakeFiles/OpenMMRPMD.dir/openmmapi/src/RPMDMonteCarloBarostat.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/src/RPMDMonteCarloBarostat.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeCustomBondForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomBondForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 70%] Building CXX object serialization/tests/CMakeFiles/TestSerializeCustomBondForce.dir/TestSerializeCustomBondForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeCustomBondForce.dir/TestSerializeCustomBondForce.cpp.o -MF CMakeFiles/TestSerializeCustomBondForce.dir/TestSerializeCustomBondForce.cpp.o.d -o CMakeFiles/TestSerializeCustomBondForce.dir/TestSerializeCustomBondForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeCustomBondForce.cpp [ 70%] Linking CXX executable ../../../TestReferenceNoseHooverIntegrator cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceNoseHooverIntegrator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceNoseHooverIntegrator.dir/TestReferenceNoseHooverIntegrator.cpp.o -o ../../../TestReferenceNoseHooverIntegrator -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 70%] Building CXX object plugins/cpupme/CMakeFiles/OpenMMPME.dir/src/CpuPmeKernels.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/cpupme && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMPME_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/cpupme/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/cpupme/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/include/pocketfft -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_PME_BUILDING_SHARED_LIBRARY -msse4.1 -MD -MT plugins/cpupme/CMakeFiles/OpenMMPME.dir/src/CpuPmeKernels.cpp.o -MF CMakeFiles/OpenMMPME.dir/src/CpuPmeKernels.cpp.o.d -o CMakeFiles/OpenMMPME.dir/src/CpuPmeKernels.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/cpupme/src/CpuPmeKernels.cpp [ 70%] Linking CXX executable ../../TestSerializeAndersenThermostat cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeAndersenThermostat.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeAndersenThermostat.dir/TestSerializeAndersenThermostat.cpp.o -o ../../TestSerializeAndersenThermostat -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 70%] Linking CXX executable ../../TestSerializeCMMotionRemover cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeCMMotionRemover.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeCMMotionRemover.dir/TestSerializeCMMotionRemover.cpp.o -o ../../TestSerializeCMMotionRemover -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 70%] Built target TestReferenceNoseHooverIntegrator make -f serialization/tests/CMakeFiles/TestSerializeCustomCVForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomCVForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeCustomCVForce.dir/DependInfo.cmake "--color=" [ 70%] Building CXX object plugins/rpmd/CMakeFiles/OpenMMRPMD.dir/openmmapi/src/RPMDMonteCarloBarostatImpl.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMRPMD_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_RPMD_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/rpmd/CMakeFiles/OpenMMRPMD.dir/openmmapi/src/RPMDMonteCarloBarostatImpl.cpp.o -MF CMakeFiles/OpenMMRPMD.dir/openmmapi/src/RPMDMonteCarloBarostatImpl.cpp.o.d -o CMakeFiles/OpenMMRPMD.dir/openmmapi/src/RPMDMonteCarloBarostatImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/src/RPMDMonteCarloBarostatImpl.cpp [ 70%] Linking CXX executable ../../../TestReferenceVerletIntegrator cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceVerletIntegrator.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeCustomCVForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomCVForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceVerletIntegrator.dir/TestReferenceVerletIntegrator.cpp.o -o ../../../TestReferenceVerletIntegrator -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 70%] Building CXX object serialization/tests/CMakeFiles/TestSerializeCustomCVForce.dir/TestSerializeCustomCVForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeCustomCVForce.dir/TestSerializeCustomCVForce.cpp.o -MF CMakeFiles/TestSerializeCustomCVForce.dir/TestSerializeCustomCVForce.cpp.o.d -o CMakeFiles/TestSerializeCustomCVForce.dir/TestSerializeCustomCVForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeCustomCVForce.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 70%] Built target TestSerializeCMMotionRemover make -f serialization/tests/CMakeFiles/TestSerializeCustomCentroidBondForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomCentroidBondForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeCustomCentroidBondForce.dir/DependInfo.cmake "--color=" [ 70%] Building CXX object plugins/drude/CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeHelpers.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMDrude_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_DRUDE_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/drude/CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeHelpers.cpp.o -MF CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeHelpers.cpp.o.d -o CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeHelpers.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/src/DrudeHelpers.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeCustomCentroidBondForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomCentroidBondForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 70%] Linking CXX executable ../../TestSerializationNode make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializationNode.dir/link.txt --verbose=1 [ 70%] Building CXX object serialization/tests/CMakeFiles/TestSerializeCustomCentroidBondForce.dir/TestSerializeCustomCentroidBondForce.cpp.o [ 70%] Built target TestSerializeAndersenThermostat cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeCustomCentroidBondForce.dir/TestSerializeCustomCentroidBondForce.cpp.o -MF CMakeFiles/TestSerializeCustomCentroidBondForce.dir/TestSerializeCustomCentroidBondForce.cpp.o.d -o CMakeFiles/TestSerializeCustomCentroidBondForce.dir/TestSerializeCustomCentroidBondForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeCustomCentroidBondForce.cpp make -f serialization/tests/CMakeFiles/TestSerializeCustomCompoundBondForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomCompoundBondForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeCustomCompoundBondForce.dir/DependInfo.cmake "--color=" [ 70%] Built target TestReferenceVerletIntegrator make -f serialization/tests/CMakeFiles/TestSerializeCustomExternalForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomExternalForce.dir/depend /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializationNode.dir/TestSerializationNode.cpp.o -o ../../TestSerializationNode -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeCustomExternalForce.dir/DependInfo.cmake "--color=" make -f serialization/tests/CMakeFiles/TestSerializeCustomCompoundBondForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomCompoundBondForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 70%] Building CXX object serialization/tests/CMakeFiles/TestSerializeCustomCompoundBondForce.dir/TestSerializeCustomCompoundBondForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeCustomCompoundBondForce.dir/TestSerializeCustomCompoundBondForce.cpp.o -MF CMakeFiles/TestSerializeCustomCompoundBondForce.dir/TestSerializeCustomCompoundBondForce.cpp.o.d -o CMakeFiles/TestSerializeCustomCompoundBondForce.dir/TestSerializeCustomCompoundBondForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeCustomCompoundBondForce.cpp [ 70%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaMultipoleForceImpl.cpp.o make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeCustomExternalForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomExternalForce.dir/build cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaMultipoleForceImpl.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaMultipoleForceImpl.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaMultipoleForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/src/AmoebaMultipoleForceImpl.cpp make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 70%] Building CXX object serialization/tests/CMakeFiles/TestSerializeCustomExternalForce.dir/TestSerializeCustomExternalForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeCustomExternalForce.dir/TestSerializeCustomExternalForce.cpp.o -MF CMakeFiles/TestSerializeCustomExternalForce.dir/TestSerializeCustomExternalForce.cpp.o.d -o CMakeFiles/TestSerializeCustomExternalForce.dir/TestSerializeCustomExternalForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeCustomExternalForce.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 72%] Linking CXX executable ../../TestSerializeATMForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeATMForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeATMForce.dir/TestSerializeATMForce.cpp.o -o ../../TestSerializeATMForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 72%] Built target TestSerializationNode make -f serialization/tests/CMakeFiles/TestSerializeCustomGBForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomGBForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeCustomGBForce.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeCustomGBForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomGBForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 72%] Building CXX object serialization/tests/CMakeFiles/TestSerializeCustomGBForce.dir/TestSerializeCustomGBForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeCustomGBForce.dir/TestSerializeCustomGBForce.cpp.o -MF CMakeFiles/TestSerializeCustomGBForce.dir/TestSerializeCustomGBForce.cpp.o.d -o CMakeFiles/TestSerializeCustomGBForce.dir/TestSerializeCustomGBForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeCustomGBForce.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 72%] Built target TestSerializeATMForce make -f serialization/tests/CMakeFiles/TestSerializeCustomHbondForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomHbondForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeCustomHbondForce.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeCustomHbondForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomHbondForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 72%] Building CXX object serialization/tests/CMakeFiles/TestSerializeCustomHbondForce.dir/TestSerializeCustomHbondForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeCustomHbondForce.dir/TestSerializeCustomHbondForce.cpp.o -MF CMakeFiles/TestSerializeCustomHbondForce.dir/TestSerializeCustomHbondForce.cpp.o.d -o CMakeFiles/TestSerializeCustomHbondForce.dir/TestSerializeCustomHbondForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeCustomHbondForce.cpp [ 72%] Linking CXX executable ../../../TestReferenceVirtualSites cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceVirtualSites.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceVirtualSites.dir/TestReferenceVirtualSites.cpp.o -o ../../../TestReferenceVirtualSites -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 72%] Built target TestReferenceVirtualSites [ 72%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaTorsionTorsionForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaTorsionTorsionForce.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaTorsionTorsionForce.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaTorsionTorsionForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/src/AmoebaTorsionTorsionForce.cpp [ 72%] Linking CXX executable ../../TestSerializeCustomAngleForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeCustomAngleForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeCustomAngleForce.dir/TestSerializeCustomAngleForce.cpp.o -o ../../TestSerializeCustomAngleForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 72%] Building CXX object plugins/drude/CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeIntegrator.cpp.o [ 72%] Built target TestSerializeCustomAngleForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMDrude_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_DRUDE_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/drude/CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeIntegrator.cpp.o -MF CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeIntegrator.cpp.o.d -o CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/src/DrudeIntegrator.cpp make -f serialization/tests/CMakeFiles/TestSerializeCustomManyParticleForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomManyParticleForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeCustomManyParticleForce.dir/DependInfo.cmake "--color=" [ 72%] Linking CXX executable ../../TestSerializeCMAPTorsion cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeCMAPTorsion.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeCustomManyParticleForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomManyParticleForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeCMAPTorsion.dir/TestSerializeCMAPTorsion.cpp.o -o ../../TestSerializeCMAPTorsion -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 72%] Linking CXX executable ../../../TestReferenceDispersionPME cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceDispersionPME.dir/link.txt --verbose=1 [ 72%] Building CXX object serialization/tests/CMakeFiles/TestSerializeCustomManyParticleForce.dir/TestSerializeCustomManyParticleForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeCustomManyParticleForce.dir/TestSerializeCustomManyParticleForce.cpp.o -MF CMakeFiles/TestSerializeCustomManyParticleForce.dir/TestSerializeCustomManyParticleForce.cpp.o.d -o CMakeFiles/TestSerializeCustomManyParticleForce.dir/TestSerializeCustomManyParticleForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeCustomManyParticleForce.cpp /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceDispersionPME.dir/TestReferenceDispersionPME.cpp.o -o ../../../TestReferenceDispersionPME -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 72%] Linking CXX executable ../../TestSerializeCustomCVForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeCustomCVForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeCustomCVForce.dir/TestSerializeCustomCVForce.cpp.o -o ../../TestSerializeCustomCVForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 72%] Linking CXX executable ../../TestSerializeCustomBondForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeCustomBondForce.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeCustomBondForce.dir/TestSerializeCustomBondForce.cpp.o -o ../../TestSerializeCustomBondForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 72%] Built target TestSerializeCMAPTorsion [ 72%] Built target TestReferenceDispersionPME make -f serialization/tests/CMakeFiles/TestSerializeCustomNonbondedForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomNonbondedForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeCustomNonbondedForce.dir/DependInfo.cmake "--color=" make -f serialization/tests/CMakeFiles/TestSerializeCustomTorsionForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomTorsionForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeCustomTorsionForce.dir/DependInfo.cmake "--color=" [ 72%] Linking CXX executable ../../TestSerializeCustomExternalForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeCustomExternalForce.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeCustomNonbondedForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomNonbondedForce.dir/build /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeCustomExternalForce.dir/TestSerializeCustomExternalForce.cpp.o -o ../../TestSerializeCustomExternalForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeCustomTorsionForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeCustomTorsionForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 72%] Building CXX object serialization/tests/CMakeFiles/TestSerializeCustomNonbondedForce.dir/TestSerializeCustomNonbondedForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeCustomNonbondedForce.dir/TestSerializeCustomNonbondedForce.cpp.o -MF CMakeFiles/TestSerializeCustomNonbondedForce.dir/TestSerializeCustomNonbondedForce.cpp.o.d -o CMakeFiles/TestSerializeCustomNonbondedForce.dir/TestSerializeCustomNonbondedForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeCustomNonbondedForce.cpp [ 72%] Building CXX object serialization/tests/CMakeFiles/TestSerializeCustomTorsionForce.dir/TestSerializeCustomTorsionForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeCustomTorsionForce.dir/TestSerializeCustomTorsionForce.cpp.o -MF CMakeFiles/TestSerializeCustomTorsionForce.dir/TestSerializeCustomTorsionForce.cpp.o.d -o CMakeFiles/TestSerializeCustomTorsionForce.dir/TestSerializeCustomTorsionForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeCustomTorsionForce.cpp [ 72%] Linking CXX shared library ../../libOpenMMRPMD.so cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMMRPMD.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,-z,relro -Wl,--as-needed -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libOpenMMRPMD.so -o ../../libOpenMMRPMD.so CMakeFiles/OpenMMRPMD.dir/openmmapi/src/RPMDIntegrator.cpp.o CMakeFiles/OpenMMRPMD.dir/openmmapi/src/RPMDMonteCarloBarostat.cpp.o CMakeFiles/OpenMMRPMD.dir/openmmapi/src/RPMDMonteCarloBarostatImpl.cpp.o -Wl,-rpath,"\$ORIGIN:" /usr/lib/x86_64-linux-gnu/libdl.a ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 72%] Linking CXX executable ../../../TestReferenceNonbondedForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceNonbondedForce.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceNonbondedForce.dir/TestReferenceNonbondedForce.cpp.o -o ../../../TestReferenceNonbondedForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 72%] Built target TestSerializeCustomCVForce make -f serialization/tests/CMakeFiles/TestSerializeGBSAOBCForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeGBSAOBCForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeGBSAOBCForce.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeGBSAOBCForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeGBSAOBCForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 72%] Built target TestSerializeCustomExternalForce make -f serialization/tests/CMakeFiles/TestSerializeGayBerneForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeGayBerneForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeGayBerneForce.dir/DependInfo.cmake "--color=" [ 72%] Building CXX object serialization/tests/CMakeFiles/TestSerializeGBSAOBCForce.dir/TestSerializeGBSAOBCForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeGBSAOBCForce.dir/TestSerializeGBSAOBCForce.cpp.o -MF CMakeFiles/TestSerializeGBSAOBCForce.dir/TestSerializeGBSAOBCForce.cpp.o.d -o CMakeFiles/TestSerializeGBSAOBCForce.dir/TestSerializeGBSAOBCForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeGBSAOBCForce.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeGayBerneForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeGayBerneForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 72%] Building CXX object plugins/drude/CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeLangevinIntegrator.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMDrude_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_DRUDE_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/drude/CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeLangevinIntegrator.cpp.o -MF CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeLangevinIntegrator.cpp.o.d -o CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeLangevinIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/src/DrudeLangevinIntegrator.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 72%] Building CXX object serialization/tests/CMakeFiles/TestSerializeGayBerneForce.dir/TestSerializeGayBerneForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeGayBerneForce.dir/TestSerializeGayBerneForce.cpp.o -MF CMakeFiles/TestSerializeGayBerneForce.dir/TestSerializeGayBerneForce.cpp.o.d -o CMakeFiles/TestSerializeGayBerneForce.dir/TestSerializeGayBerneForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeGayBerneForce.cpp [ 72%] Built target TestSerializeCustomBondForce make -f serialization/tests/CMakeFiles/TestSerializeHarmonicAngleForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeHarmonicAngleForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeHarmonicAngleForce.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeHarmonicAngleForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeHarmonicAngleForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 72%] Built target TestReferenceNonbondedForce make -f serialization/tests/CMakeFiles/TestSerializeHarmonicBondForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeHarmonicBondForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeHarmonicBondForce.dir/DependInfo.cmake "--color=" [ 72%] Building CXX object serialization/tests/CMakeFiles/TestSerializeHarmonicAngleForce.dir/TestSerializeHarmonicAngleForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeHarmonicAngleForce.dir/TestSerializeHarmonicAngleForce.cpp.o -MF CMakeFiles/TestSerializeHarmonicAngleForce.dir/TestSerializeHarmonicAngleForce.cpp.o.d -o CMakeFiles/TestSerializeHarmonicAngleForce.dir/TestSerializeHarmonicAngleForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeHarmonicAngleForce.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeHarmonicBondForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeHarmonicBondForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 72%] Building CXX object serialization/tests/CMakeFiles/TestSerializeHarmonicBondForce.dir/TestSerializeHarmonicBondForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeHarmonicBondForce.dir/TestSerializeHarmonicBondForce.cpp.o -MF CMakeFiles/TestSerializeHarmonicBondForce.dir/TestSerializeHarmonicBondForce.cpp.o.d -o CMakeFiles/TestSerializeHarmonicBondForce.dir/TestSerializeHarmonicBondForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeHarmonicBondForce.cpp [ 72%] Linking CXX executable ../../TestSerializeCustomCompoundBondForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeCustomCompoundBondForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeCustomCompoundBondForce.dir/TestSerializeCustomCompoundBondForce.cpp.o -o ../../TestSerializeCustomCompoundBondForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 72%] Built target OpenMMRPMD make -f serialization/tests/CMakeFiles/TestSerializeIntegrator.dir/build.make serialization/tests/CMakeFiles/TestSerializeIntegrator.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeIntegrator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeIntegrator.dir/build.make serialization/tests/CMakeFiles/TestSerializeIntegrator.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 72%] Building CXX object serialization/tests/CMakeFiles/TestSerializeIntegrator.dir/TestSerializeIntegrator.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeIntegrator.dir/TestSerializeIntegrator.cpp.o -MF CMakeFiles/TestSerializeIntegrator.dir/TestSerializeIntegrator.cpp.o.d -o CMakeFiles/TestSerializeIntegrator.dir/TestSerializeIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeIntegrator.cpp [ 72%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaTorsionTorsionForceImpl.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaTorsionTorsionForceImpl.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaTorsionTorsionForceImpl.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaTorsionTorsionForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/src/AmoebaTorsionTorsionForceImpl.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 72%] Built target TestSerializeCustomCompoundBondForce make -f serialization/tests/CMakeFiles/TestSerializeMonteCarloAnisotropicBarostat.dir/build.make serialization/tests/CMakeFiles/TestSerializeMonteCarloAnisotropicBarostat.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeMonteCarloAnisotropicBarostat.dir/DependInfo.cmake "--color=" [ 72%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLCompact.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLCompact.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLCompact.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLCompact.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src/OpenCLCompact.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeMonteCarloAnisotropicBarostat.dir/build.make serialization/tests/CMakeFiles/TestSerializeMonteCarloAnisotropicBarostat.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 75%] Building CXX object serialization/tests/CMakeFiles/TestSerializeMonteCarloAnisotropicBarostat.dir/TestSerializeMonteCarloAnisotropicBarostat.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeMonteCarloAnisotropicBarostat.dir/TestSerializeMonteCarloAnisotropicBarostat.cpp.o -MF CMakeFiles/TestSerializeMonteCarloAnisotropicBarostat.dir/TestSerializeMonteCarloAnisotropicBarostat.cpp.o.d -o CMakeFiles/TestSerializeMonteCarloAnisotropicBarostat.dir/TestSerializeMonteCarloAnisotropicBarostat.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeMonteCarloAnisotropicBarostat.cpp [ 75%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForce.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForce.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src/CpuCustomNonbondedForce.cpp [ 75%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaVdwForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaVdwForce.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaVdwForce.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaVdwForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/src/AmoebaVdwForce.cpp [ 77%] Linking CXX executable ../../TestSerializeCustomGBForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeCustomGBForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeCustomGBForce.dir/TestSerializeCustomGBForce.cpp.o -o ../../TestSerializeCustomGBForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 77%] Built target TestSerializeCustomGBForce make -f serialization/tests/CMakeFiles/TestSerializeMonteCarloBarostat.dir/build.make serialization/tests/CMakeFiles/TestSerializeMonteCarloBarostat.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeMonteCarloBarostat.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeMonteCarloBarostat.dir/build.make serialization/tests/CMakeFiles/TestSerializeMonteCarloBarostat.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 77%] Building CXX object serialization/tests/CMakeFiles/TestSerializeMonteCarloBarostat.dir/TestSerializeMonteCarloBarostat.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeMonteCarloBarostat.dir/TestSerializeMonteCarloBarostat.cpp.o -MF CMakeFiles/TestSerializeMonteCarloBarostat.dir/TestSerializeMonteCarloBarostat.cpp.o.d -o CMakeFiles/TestSerializeMonteCarloBarostat.dir/TestSerializeMonteCarloBarostat.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeMonteCarloBarostat.cpp [ 77%] Linking CXX executable ../../TestSerializeGBSAOBCForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeGBSAOBCForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeGBSAOBCForce.dir/TestSerializeGBSAOBCForce.cpp.o -o ../../TestSerializeGBSAOBCForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 77%] Linking CXX executable ../../TestSerializeGayBerneForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeGayBerneForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeGayBerneForce.dir/TestSerializeGayBerneForce.cpp.o -o ../../TestSerializeGayBerneForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 77%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLContext.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLContext.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLContext.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLContext.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src/OpenCLContext.cpp [ 77%] Building CXX object plugins/drude/CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeNoseHooverIntegrator.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMDrude_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_DRUDE_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/drude/CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeNoseHooverIntegrator.cpp.o -MF CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeNoseHooverIntegrator.cpp.o.d -o CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeNoseHooverIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/src/DrudeNoseHooverIntegrator.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 77%] Built target TestSerializeGBSAOBCForce make -f serialization/tests/CMakeFiles/TestSerializeMonteCarloFlexibleBarostat.dir/build.make serialization/tests/CMakeFiles/TestSerializeMonteCarloFlexibleBarostat.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeMonteCarloFlexibleBarostat.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeMonteCarloFlexibleBarostat.dir/build.make serialization/tests/CMakeFiles/TestSerializeMonteCarloFlexibleBarostat.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 77%] Built target TestSerializeGayBerneForce make -f serialization/tests/CMakeFiles/TestSerializeMonteCarloMembraneBarostat.dir/build.make serialization/tests/CMakeFiles/TestSerializeMonteCarloMembraneBarostat.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeMonteCarloMembraneBarostat.dir/DependInfo.cmake "--color=" [ 77%] Building CXX object serialization/tests/CMakeFiles/TestSerializeMonteCarloFlexibleBarostat.dir/TestSerializeMonteCarloFlexibleBarostat.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeMonteCarloFlexibleBarostat.dir/TestSerializeMonteCarloFlexibleBarostat.cpp.o -MF CMakeFiles/TestSerializeMonteCarloFlexibleBarostat.dir/TestSerializeMonteCarloFlexibleBarostat.cpp.o.d -o CMakeFiles/TestSerializeMonteCarloFlexibleBarostat.dir/TestSerializeMonteCarloFlexibleBarostat.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeMonteCarloFlexibleBarostat.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeMonteCarloMembraneBarostat.dir/build.make serialization/tests/CMakeFiles/TestSerializeMonteCarloMembraneBarostat.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 77%] Linking CXX executable ../../TestSerializeCustomHbondForce [ 77%] Building CXX object serialization/tests/CMakeFiles/TestSerializeMonteCarloMembraneBarostat.dir/TestSerializeMonteCarloMembraneBarostat.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeCustomHbondForce.dir/link.txt --verbose=1 cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeMonteCarloMembraneBarostat.dir/TestSerializeMonteCarloMembraneBarostat.cpp.o -MF CMakeFiles/TestSerializeMonteCarloMembraneBarostat.dir/TestSerializeMonteCarloMembraneBarostat.cpp.o.d -o CMakeFiles/TestSerializeMonteCarloMembraneBarostat.dir/TestSerializeMonteCarloMembraneBarostat.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeMonteCarloMembraneBarostat.cpp /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeCustomHbondForce.dir/TestSerializeCustomHbondForce.cpp.o -o ../../TestSerializeCustomHbondForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 77%] Linking CXX executable ../../TestSerializeCustomCentroidBondForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeCustomCentroidBondForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeCustomCentroidBondForce.dir/TestSerializeCustomCentroidBondForce.cpp.o -o ../../TestSerializeCustomCentroidBondForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 77%] Built target TestSerializeCustomHbondForce make -f serialization/tests/CMakeFiles/TestSerializeNonbondedForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeNonbondedForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeNonbondedForce.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeNonbondedForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeNonbondedForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 77%] Building CXX object serialization/tests/CMakeFiles/TestSerializeNonbondedForce.dir/TestSerializeNonbondedForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeNonbondedForce.dir/TestSerializeNonbondedForce.cpp.o -MF CMakeFiles/TestSerializeNonbondedForce.dir/TestSerializeNonbondedForce.cpp.o.d -o CMakeFiles/TestSerializeNonbondedForce.dir/TestSerializeNonbondedForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeNonbondedForce.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 77%] Linking CXX executable ../../TestSerializeMonteCarloAnisotropicBarostat [ 77%] Built target TestSerializeCustomCentroidBondForce make -f serialization/tests/CMakeFiles/TestSerializeNoseHooverIntegrator.dir/build.make serialization/tests/CMakeFiles/TestSerializeNoseHooverIntegrator.dir/depend cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeMonteCarloAnisotropicBarostat.dir/link.txt --verbose=1 make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeNoseHooverIntegrator.dir/DependInfo.cmake "--color=" [ 77%] Linking CXX executable ../../TestSerializeHarmonicBondForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeHarmonicBondForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeMonteCarloAnisotropicBarostat.dir/TestSerializeMonteCarloAnisotropicBarostat.cpp.o -o ../../TestSerializeMonteCarloAnisotropicBarostat -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeNoseHooverIntegrator.dir/build.make serialization/tests/CMakeFiles/TestSerializeNoseHooverIntegrator.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeHarmonicBondForce.dir/TestSerializeHarmonicBondForce.cpp.o -o ../../TestSerializeHarmonicBondForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 77%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaVdwForceImpl.cpp.o [ 77%] Building CXX object serialization/tests/CMakeFiles/TestSerializeNoseHooverIntegrator.dir/TestSerializeNoseHooverIntegrator.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaVdwForceImpl.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaVdwForceImpl.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaVdwForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/src/AmoebaVdwForceImpl.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeNoseHooverIntegrator.dir/TestSerializeNoseHooverIntegrator.cpp.o -MF CMakeFiles/TestSerializeNoseHooverIntegrator.dir/TestSerializeNoseHooverIntegrator.cpp.o.d -o CMakeFiles/TestSerializeNoseHooverIntegrator.dir/TestSerializeNoseHooverIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeNoseHooverIntegrator.cpp [ 77%] Linking CXX executable ../../TestSerializeHarmonicAngleForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeHarmonicAngleForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeHarmonicAngleForce.dir/TestSerializeHarmonicAngleForce.cpp.o -o ../../TestSerializeHarmonicAngleForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 79%] Linking CXX executable ../../../TestReferenceEwald cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceEwald.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceEwald.dir/TestReferenceEwald.cpp.o -o ../../../TestReferenceEwald -Wl,-rpath,"\$ORIGIN" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 79%] Linking CXX executable ../../TestSerializeCustomManyParticleForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeCustomManyParticleForce.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 79%] Linking CXX executable ../../TestSerializeCustomTorsionForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeCustomTorsionForce.dir/link.txt --verbose=1 [ 79%] Built target TestSerializeHarmonicBondForce /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeCustomManyParticleForce.dir/TestSerializeCustomManyParticleForce.cpp.o -o ../../TestSerializeCustomManyParticleForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make -f serialization/tests/CMakeFiles/TestSerializePeriodicTorsionForce.dir/build.make serialization/tests/CMakeFiles/TestSerializePeriodicTorsionForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 79%] Built target TestSerializeHarmonicAngleForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializePeriodicTorsionForce.dir/DependInfo.cmake "--color=" make -f serialization/tests/CMakeFiles/TestSerializeRBTorsionForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeRBTorsionForce.dir/depend /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeCustomTorsionForce.dir/TestSerializeCustomTorsionForce.cpp.o -o ../../TestSerializeCustomTorsionForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeRBTorsionForce.dir/DependInfo.cmake "--color=" [ 79%] Built target TestSerializeMonteCarloAnisotropicBarostat make -f serialization/tests/CMakeFiles/TestSerializeRMSDForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeRMSDForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeRMSDForce.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializePeriodicTorsionForce.dir/build.make serialization/tests/CMakeFiles/TestSerializePeriodicTorsionForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeRBTorsionForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeRBTorsionForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 79%] Building CXX object serialization/tests/CMakeFiles/TestSerializePeriodicTorsionForce.dir/TestSerializePeriodicTorsionForce.cpp.o make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializePeriodicTorsionForce.dir/TestSerializePeriodicTorsionForce.cpp.o -MF CMakeFiles/TestSerializePeriodicTorsionForce.dir/TestSerializePeriodicTorsionForce.cpp.o.d -o CMakeFiles/TestSerializePeriodicTorsionForce.dir/TestSerializePeriodicTorsionForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializePeriodicTorsionForce.cpp make -f serialization/tests/CMakeFiles/TestSerializeRMSDForce.dir/build.make serialization/tests/CMakeFiles/TestSerializeRMSDForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 79%] Building CXX object serialization/tests/CMakeFiles/TestSerializeRBTorsionForce.dir/TestSerializeRBTorsionForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeRBTorsionForce.dir/TestSerializeRBTorsionForce.cpp.o -MF CMakeFiles/TestSerializeRBTorsionForce.dir/TestSerializeRBTorsionForce.cpp.o.d -o CMakeFiles/TestSerializeRBTorsionForce.dir/TestSerializeRBTorsionForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeRBTorsionForce.cpp [ 79%] Building CXX object serialization/tests/CMakeFiles/TestSerializeRMSDForce.dir/TestSerializeRMSDForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeRMSDForce.dir/TestSerializeRMSDForce.cpp.o -MF CMakeFiles/TestSerializeRMSDForce.dir/TestSerializeRMSDForce.cpp.o.d -o CMakeFiles/TestSerializeRMSDForce.dir/TestSerializeRMSDForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeRMSDForce.cpp [ 79%] Linking CXX executable ../../TestSerializeMonteCarloBarostat cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeMonteCarloBarostat.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeMonteCarloBarostat.dir/TestSerializeMonteCarloBarostat.cpp.o -o ../../TestSerializeMonteCarloBarostat -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 79%] Built target TestReferenceEwald make -f serialization/tests/CMakeFiles/TestSerializeState.dir/build.make serialization/tests/CMakeFiles/TestSerializeState.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeState.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 79%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaWcaDispersionForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaWcaDispersionForce.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaWcaDispersionForce.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaWcaDispersionForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/src/AmoebaWcaDispersionForce.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 79%] Built target TestSerializeCustomManyParticleForce make -f serialization/tests/CMakeFiles/TestSerializeState.dir/build.make serialization/tests/CMakeFiles/TestSerializeState.dir/build make -f serialization/tests/CMakeFiles/TestSerializeSystem.dir/build.make serialization/tests/CMakeFiles/TestSerializeSystem.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeSystem.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 79%] Building CXX object serialization/tests/CMakeFiles/TestSerializeState.dir/TestSerializeState.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeState.dir/TestSerializeState.cpp.o -MF CMakeFiles/TestSerializeState.dir/TestSerializeState.cpp.o.d -o CMakeFiles/TestSerializeState.dir/TestSerializeState.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeState.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeSystem.dir/build.make serialization/tests/CMakeFiles/TestSerializeSystem.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 79%] Built target TestSerializeCustomTorsionForce make -f serialization/tests/CMakeFiles/TestSerializeTabulatedFunctions.dir/build.make serialization/tests/CMakeFiles/TestSerializeTabulatedFunctions.dir/depend [ 81%] Building CXX object serialization/tests/CMakeFiles/TestSerializeSystem.dir/TestSerializeSystem.cpp.o make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeSystem.dir/TestSerializeSystem.cpp.o -MF CMakeFiles/TestSerializeSystem.dir/TestSerializeSystem.cpp.o.d -o CMakeFiles/TestSerializeSystem.dir/TestSerializeSystem.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeSystem.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests/CMakeFiles/TestSerializeTabulatedFunctions.dir/DependInfo.cmake "--color=" [ 81%] Built target TestSerializeMonteCarloBarostat make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f serialization/tests/CMakeFiles/TestSerializeTabulatedFunctions.dir/build.make serialization/tests/CMakeFiles/TestSerializeTabulatedFunctions.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 81%] Building CXX object serialization/tests/CMakeFiles/TestSerializeTabulatedFunctions.dir/TestSerializeTabulatedFunctions.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT serialization/tests/CMakeFiles/TestSerializeTabulatedFunctions.dir/TestSerializeTabulatedFunctions.cpp.o -MF CMakeFiles/TestSerializeTabulatedFunctions.dir/TestSerializeTabulatedFunctions.cpp.o.d -o CMakeFiles/TestSerializeTabulatedFunctions.dir/TestSerializeTabulatedFunctions.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/serialization/tests/TestSerializeTabulatedFunctions.cpp [ 81%] Building CXX object plugins/drude/CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeSCFIntegrator.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMDrude_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_DRUDE_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/drude/CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeSCFIntegrator.cpp.o -MF CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeSCFIntegrator.cpp.o.d -o CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeSCFIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/src/DrudeSCFIntegrator.cpp [ 81%] Linking CXX executable ../../TestSerializeMonteCarloFlexibleBarostat cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeMonteCarloFlexibleBarostat.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeMonteCarloFlexibleBarostat.dir/TestSerializeMonteCarloFlexibleBarostat.cpp.o -o ../../TestSerializeMonteCarloFlexibleBarostat -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 81%] Linking CXX executable ../../TestSerializeCustomNonbondedForce make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeCustomNonbondedForce.dir/link.txt --verbose=1 [ 81%] Built target TestSerializeMonteCarloFlexibleBarostat /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeCustomNonbondedForce.dir/TestSerializeCustomNonbondedForce.cpp.o -o ../../TestSerializeCustomNonbondedForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make -f tests/CMakeFiles/TestEnforcePeriodicBox.dir/build.make tests/CMakeFiles/TestEnforcePeriodicBox.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests/CMakeFiles/TestEnforcePeriodicBox.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f tests/CMakeFiles/TestEnforcePeriodicBox.dir/build.make tests/CMakeFiles/TestEnforcePeriodicBox.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 81%] Building CXX object tests/CMakeFiles/TestEnforcePeriodicBox.dir/TestEnforcePeriodicBox.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT tests/CMakeFiles/TestEnforcePeriodicBox.dir/TestEnforcePeriodicBox.cpp.o -MF CMakeFiles/TestEnforcePeriodicBox.dir/TestEnforcePeriodicBox.cpp.o.d -o CMakeFiles/TestEnforcePeriodicBox.dir/TestEnforcePeriodicBox.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/tests/TestEnforcePeriodicBox.cpp [ 81%] Linking CXX executable ../../TestSerializeMonteCarloMembraneBarostat cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeMonteCarloMembraneBarostat.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeMonteCarloMembraneBarostat.dir/TestSerializeMonteCarloMembraneBarostat.cpp.o -o ../../TestSerializeMonteCarloMembraneBarostat -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 81%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaWcaDispersionForceImpl.cpp.o make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaWcaDispersionForceImpl.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaWcaDispersionForceImpl.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaWcaDispersionForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/src/AmoebaWcaDispersionForceImpl.cpp [ 81%] Built target TestSerializeCustomNonbondedForce make -f tests/CMakeFiles/TestFindExclusions.dir/build.make tests/CMakeFiles/TestFindExclusions.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests/CMakeFiles/TestFindExclusions.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f tests/CMakeFiles/TestFindExclusions.dir/build.make tests/CMakeFiles/TestFindExclusions.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 81%] Building CXX object tests/CMakeFiles/TestFindExclusions.dir/TestFindExclusions.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT tests/CMakeFiles/TestFindExclusions.dir/TestFindExclusions.cpp.o -MF CMakeFiles/TestFindExclusions.dir/TestFindExclusions.cpp.o.d -o CMakeFiles/TestFindExclusions.dir/TestFindExclusions.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/tests/TestFindExclusions.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 81%] Built target TestSerializeMonteCarloMembraneBarostat make -f tests/CMakeFiles/TestFindMolecules.dir/build.make tests/CMakeFiles/TestFindMolecules.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests/CMakeFiles/TestFindMolecules.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f tests/CMakeFiles/TestFindMolecules.dir/build.make tests/CMakeFiles/TestFindMolecules.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 81%] Building CXX object tests/CMakeFiles/TestFindMolecules.dir/TestFindMolecules.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT tests/CMakeFiles/TestFindMolecules.dir/TestFindMolecules.cpp.o -MF CMakeFiles/TestFindMolecules.dir/TestFindMolecules.cpp.o.d -o CMakeFiles/TestFindMolecules.dir/TestFindMolecules.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/tests/TestFindMolecules.cpp [ 81%] Building CXX object plugins/drude/CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeForceProxy.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMDrude_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_DRUDE_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/drude/CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeForceProxy.cpp.o -MF CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeForceProxy.cpp.o.d -o CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/serialization/src/DrudeForceProxy.cpp [ 81%] Linking CXX executable ../../TestSerializeRMSDForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeRMSDForce.dir/link.txt --verbose=1 [ 81%] Building CXX object plugins/drude/CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeLangevinIntegratorProxy.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMDrude_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_DRUDE_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/drude/CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeLangevinIntegratorProxy.cpp.o -MF CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeLangevinIntegratorProxy.cpp.o.d -o CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeLangevinIntegratorProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/serialization/src/DrudeLangevinIntegratorProxy.cpp /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeRMSDForce.dir/TestSerializeRMSDForce.cpp.o -o ../../TestSerializeRMSDForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 81%] Built target TestSerializeRMSDForce make -f tests/CMakeFiles/TestParser.dir/build.make tests/CMakeFiles/TestParser.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests/CMakeFiles/TestParser.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f tests/CMakeFiles/TestParser.dir/build.make tests/CMakeFiles/TestParser.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 81%] Building CXX object tests/CMakeFiles/TestParser.dir/TestParser.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT tests/CMakeFiles/TestParser.dir/TestParser.cpp.o -MF CMakeFiles/TestParser.dir/TestParser.cpp.o.d -o CMakeFiles/TestParser.dir/TestParser.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/tests/TestParser.cpp [ 81%] Building CXX object plugins/drude/CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeNoseHooverIntegratorProxy.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMDrude_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_DRUDE_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/drude/CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeNoseHooverIntegratorProxy.cpp.o -MF CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeNoseHooverIntegratorProxy.cpp.o.d -o CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeNoseHooverIntegratorProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/serialization/src/DrudeNoseHooverIntegratorProxy.cpp [ 83%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/HippoNonbondedForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/HippoNonbondedForce.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/HippoNonbondedForce.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/HippoNonbondedForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/src/HippoNonbondedForce.cpp [ 83%] Building CXX object plugins/drude/CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeSerializationProxyRegistration.cpp.o [ 83%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForceAvx.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMDrude_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_DRUDE_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/drude/CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeSerializationProxyRegistration.cpp.o -MF CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeSerializationProxyRegistration.cpp.o.d -o CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeSerializationProxyRegistration.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/serialization/src/DrudeSerializationProxyRegistration.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -mavx -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForceAvx.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForceAvx.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForceAvx.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src/CpuCustomNonbondedForceAvx.cpp [ 83%] Linking CXX executable ../TestEnforcePeriodicBox cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestEnforcePeriodicBox.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestEnforcePeriodicBox.dir/TestEnforcePeriodicBox.cpp.o -o ../TestEnforcePeriodicBox -Wl,-rpath,"\$ORIGIN" ../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 83%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/HippoNonbondedForceImpl.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/HippoNonbondedForceImpl.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/HippoNonbondedForceImpl.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/HippoNonbondedForceImpl.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/src/HippoNonbondedForceImpl.cpp [ 83%] Linking CXX executable ../../TestSerializeRBTorsionForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeRBTorsionForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeRBTorsionForce.dir/TestSerializeRBTorsionForce.cpp.o -o ../../TestSerializeRBTorsionForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 83%] Linking CXX executable ../TestFindMolecules cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestFindMolecules.dir/link.txt --verbose=1 [ 83%] Built target TestEnforcePeriodicBox make -f tests/CMakeFiles/TestSplineFitter.dir/build.make tests/CMakeFiles/TestSplineFitter.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests/CMakeFiles/TestSplineFitter.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 83%] Linking CXX executable ../../TestSerializePeriodicTorsionForce make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f tests/CMakeFiles/TestSplineFitter.dir/build.make tests/CMakeFiles/TestSplineFitter.dir/build cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializePeriodicTorsionForce.dir/link.txt --verbose=1 make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestFindMolecules.dir/TestFindMolecules.cpp.o -o ../TestFindMolecules -Wl,-rpath,"\$ORIGIN" ../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializePeriodicTorsionForce.dir/TestSerializePeriodicTorsionForce.cpp.o -o ../../TestSerializePeriodicTorsionForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 83%] Built target TestSerializeRBTorsionForce make -f tests/CMakeFiles/TestSystem.dir/build.make tests/CMakeFiles/TestSystem.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests/CMakeFiles/TestSystem.dir/DependInfo.cmake "--color=" [ 83%] Building CXX object tests/CMakeFiles/TestSplineFitter.dir/TestSplineFitter.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT tests/CMakeFiles/TestSplineFitter.dir/TestSplineFitter.cpp.o -MF CMakeFiles/TestSplineFitter.dir/TestSplineFitter.cpp.o.d -o CMakeFiles/TestSplineFitter.dir/TestSplineFitter.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/tests/TestSplineFitter.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f tests/CMakeFiles/TestSystem.dir/build.make tests/CMakeFiles/TestSystem.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 83%] Building CXX object tests/CMakeFiles/TestSystem.dir/TestSystem.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT tests/CMakeFiles/TestSystem.dir/TestSystem.cpp.o -MF CMakeFiles/TestSystem.dir/TestSystem.cpp.o.d -o CMakeFiles/TestSystem.dir/TestSystem.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/tests/TestSystem.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 83%] Built target TestFindMolecules make -f tests/CMakeFiles/TestVectorExpression.dir/build.make tests/CMakeFiles/TestVectorExpression.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests/CMakeFiles/TestVectorExpression.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f tests/CMakeFiles/TestVectorExpression.dir/build.make tests/CMakeFiles/TestVectorExpression.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 83%] Built target TestSerializePeriodicTorsionForce make -f tests/CMakeFiles/TestVectorize.dir/build.make tests/CMakeFiles/TestVectorize.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests/CMakeFiles/TestVectorize.dir/DependInfo.cmake "--color=" [ 83%] Building CXX object tests/CMakeFiles/TestVectorExpression.dir/TestVectorExpression.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT tests/CMakeFiles/TestVectorExpression.dir/TestVectorExpression.cpp.o -MF CMakeFiles/TestVectorExpression.dir/TestVectorExpression.cpp.o.d -o CMakeFiles/TestVectorExpression.dir/TestVectorExpression.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/tests/TestVectorExpression.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f tests/CMakeFiles/TestVectorize.dir/build.make tests/CMakeFiles/TestVectorize.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 83%] Building CXX object tests/CMakeFiles/TestVectorize.dir/TestVectorize.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT tests/CMakeFiles/TestVectorize.dir/TestVectorize.cpp.o -MF CMakeFiles/TestVectorize.dir/TestVectorize.cpp.o.d -o CMakeFiles/TestVectorize.dir/TestVectorize.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/tests/TestVectorize.cpp [ 83%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaGeneralizedKirkwoodForceProxy.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaGeneralizedKirkwoodForceProxy.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaGeneralizedKirkwoodForceProxy.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaGeneralizedKirkwoodForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/src/AmoebaGeneralizedKirkwoodForceProxy.cpp [ 85%] Linking CXX shared library ../../libOpenMMDrude.so cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMMDrude.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,-z,relro -Wl,--as-needed -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libOpenMMDrude.so -o ../../libOpenMMDrude.so CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeForce.cpp.o CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeForceImpl.cpp.o CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeHelpers.cpp.o CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeIntegrator.cpp.o CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeLangevinIntegrator.cpp.o CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeNoseHooverIntegrator.cpp.o CMakeFiles/OpenMMDrude.dir/openmmapi/src/DrudeSCFIntegrator.cpp.o CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeForceProxy.cpp.o CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeLangevinIntegratorProxy.cpp.o CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeNoseHooverIntegratorProxy.cpp.o CMakeFiles/OpenMMDrude.dir/serialization/src/DrudeSerializationProxyRegistration.cpp.o -Wl,-rpath,"\$ORIGIN:" /usr/lib/x86_64-linux-gnu/libdl.a ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 85%] Built target OpenMMDrude make -f tests/CMakeFiles/TestVectorizeAvx.dir/build.make tests/CMakeFiles/TestVectorizeAvx.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests/CMakeFiles/TestVectorizeAvx.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f tests/CMakeFiles/TestVectorizeAvx.dir/build.make tests/CMakeFiles/TestVectorizeAvx.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 85%] Building CXX object tests/CMakeFiles/TestVectorizeAvx.dir/TestVectorizeAvx.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -mavx -MD -MT tests/CMakeFiles/TestVectorizeAvx.dir/TestVectorizeAvx.cpp.o -MF CMakeFiles/TestVectorizeAvx.dir/TestVectorizeAvx.cpp.o.d -o CMakeFiles/TestVectorizeAvx.dir/TestVectorizeAvx.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/tests/TestVectorizeAvx.cpp [ 85%] Linking CXX executable ../../TestSerializeIntegrator cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeIntegrator.dir/link.txt --verbose=1 [ 85%] Linking CXX executable ../../TestSerializeNoseHooverIntegrator cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeNoseHooverIntegrator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeIntegrator.dir/TestSerializeIntegrator.cpp.o -o ../../TestSerializeIntegrator -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeNoseHooverIntegrator.dir/TestSerializeNoseHooverIntegrator.cpp.o -o ../../TestSerializeNoseHooverIntegrator -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 85%] Linking CXX executable ../TestFindExclusions cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestFindExclusions.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestFindExclusions.dir/TestFindExclusions.cpp.o -o ../TestFindExclusions -Wl,-rpath,"\$ORIGIN" ../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 85%] Built target TestSerializeNoseHooverIntegrator make -f tests/CMakeFiles/TestVectorizeAvx2.dir/build.make tests/CMakeFiles/TestVectorizeAvx2.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests/CMakeFiles/TestVectorizeAvx2.dir/DependInfo.cmake "--color=" [ 85%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaMultipoleForceProxy.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaMultipoleForceProxy.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaMultipoleForceProxy.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaMultipoleForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/src/AmoebaMultipoleForceProxy.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f tests/CMakeFiles/TestVectorizeAvx2.dir/build.make tests/CMakeFiles/TestVectorizeAvx2.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 85%] Built target TestSerializeIntegrator make -f examples/CMakeFiles/HelloArgon.dir/build.make examples/CMakeFiles/HelloArgon.dir/depend [ 85%] Building CXX object tests/CMakeFiles/TestVectorizeAvx2.dir/TestVectorizeAvx2.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -mfma -mavx2 -MD -MT tests/CMakeFiles/TestVectorizeAvx2.dir/TestVectorizeAvx2.cpp.o -MF CMakeFiles/TestVectorizeAvx2.dir/TestVectorizeAvx2.cpp.o.d -o CMakeFiles/TestVectorizeAvx2.dir/TestVectorizeAvx2.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/tests/TestVectorizeAvx2.cpp make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/examples /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/examples /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/examples/CMakeFiles/HelloArgon.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f examples/CMakeFiles/HelloArgon.dir/build.make examples/CMakeFiles/HelloArgon.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 85%] Building CXX object examples/CMakeFiles/HelloArgon.dir/HelloArgon.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/examples && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT examples/CMakeFiles/HelloArgon.dir/HelloArgon.cpp.o -MF CMakeFiles/HelloArgon.dir/HelloArgon.cpp.o.d -o CMakeFiles/HelloArgon.dir/HelloArgon.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/examples/HelloArgon.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 85%] Built target TestFindExclusions make -f examples/CMakeFiles/HelloSodiumChloride.dir/build.make examples/CMakeFiles/HelloSodiumChloride.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/examples /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/examples /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/examples/CMakeFiles/HelloSodiumChloride.dir/DependInfo.cmake "--color=" [ 85%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaSerializationProxyRegistration.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaSerializationProxyRegistration.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaSerializationProxyRegistration.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaSerializationProxyRegistration.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/src/AmoebaSerializationProxyRegistration.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f examples/CMakeFiles/HelloSodiumChloride.dir/build.make examples/CMakeFiles/HelloSodiumChloride.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 85%] Building CXX object examples/CMakeFiles/HelloSodiumChloride.dir/HelloSodiumChloride.cpp.o [ 85%] Linking CXX executable ../TestVectorExpression cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/examples && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT examples/CMakeFiles/HelloSodiumChloride.dir/HelloSodiumChloride.cpp.o -MF CMakeFiles/HelloSodiumChloride.dir/HelloSodiumChloride.cpp.o.d -o CMakeFiles/HelloSodiumChloride.dir/HelloSodiumChloride.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/examples/HelloSodiumChloride.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestVectorExpression.dir/link.txt --verbose=1 [ 85%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaTorsionTorsionForceProxy.cpp.o /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestVectorExpression.dir/TestVectorExpression.cpp.o -o ../TestVectorExpression -Wl,-rpath,"\$ORIGIN" ../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaTorsionTorsionForceProxy.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaTorsionTorsionForceProxy.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaTorsionTorsionForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/src/AmoebaTorsionTorsionForceProxy.cpp [ 85%] Linking CXX executable ../../TestSerializeState cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeState.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeState.dir/TestSerializeState.cpp.o -o ../../TestSerializeState -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 85%] Linking CXX executable ../../TestSerializeSystem cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeSystem.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeSystem.dir/TestSerializeSystem.cpp.o -o ../../TestSerializeSystem -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 85%] Built target TestVectorExpression make -f examples/CMakeFiles/HelloEthane.dir/build.make examples/CMakeFiles/HelloEthane.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/examples /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/examples /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/examples/CMakeFiles/HelloEthane.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f examples/CMakeFiles/HelloEthane.dir/build.make examples/CMakeFiles/HelloEthane.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 85%] Built target TestSerializeState make -f examples/CMakeFiles/HelloWaterBox.dir/build.make examples/CMakeFiles/HelloWaterBox.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/examples /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/examples /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/examples/CMakeFiles/HelloWaterBox.dir/DependInfo.cmake "--color=" [ 87%] Building CXX object examples/CMakeFiles/HelloEthane.dir/HelloEthane.cpp.o make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f examples/CMakeFiles/HelloWaterBox.dir/build.make examples/CMakeFiles/HelloWaterBox.dir/build [ 87%] Linking CXX executable ../../TestSerializeNonbondedForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/examples && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT examples/CMakeFiles/HelloEthane.dir/HelloEthane.cpp.o -MF CMakeFiles/HelloEthane.dir/HelloEthane.cpp.o.d -o CMakeFiles/HelloEthane.dir/HelloEthane.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/examples/HelloEthane.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeNonbondedForce.dir/link.txt --verbose=1 make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeNonbondedForce.dir/TestSerializeNonbondedForce.cpp.o -o ../../TestSerializeNonbondedForce -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 87%] Building CXX object examples/CMakeFiles/HelloWaterBox.dir/HelloWaterBox.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/examples && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT examples/CMakeFiles/HelloWaterBox.dir/HelloWaterBox.cpp.o -MF CMakeFiles/HelloWaterBox.dir/HelloWaterBox.cpp.o.d -o CMakeFiles/HelloWaterBox.dir/HelloWaterBox.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/examples/HelloWaterBox.cpp [ 87%] Built target TestSerializeSystem make -f plugins/rpmd/platforms/reference/CMakeFiles/OpenMMRPMDReference.dir/build.make plugins/rpmd/platforms/reference/CMakeFiles/OpenMMRPMDReference.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/reference /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/reference /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/reference/CMakeFiles/OpenMMRPMDReference.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/rpmd/platforms/reference/CMakeFiles/OpenMMRPMDReference.dir/build.make plugins/rpmd/platforms/reference/CMakeFiles/OpenMMRPMDReference.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 87%] Building CXX object plugins/rpmd/platforms/reference/CMakeFiles/OpenMMRPMDReference.dir/src/ReferenceRpmdKernelFactory.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/reference && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMRPMDReference_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/rpmd/platforms/reference/CMakeFiles/OpenMMRPMDReference.dir/src/ReferenceRpmdKernelFactory.cpp.o -MF CMakeFiles/OpenMMRPMDReference.dir/src/ReferenceRpmdKernelFactory.cpp.o.d -o CMakeFiles/OpenMMRPMDReference.dir/src/ReferenceRpmdKernelFactory.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/reference/src/ReferenceRpmdKernelFactory.cpp [ 87%] Built target TestSerializeNonbondedForce make -f plugins/drude/platforms/reference/CMakeFiles/OpenMMDrudeReference.dir/build.make plugins/drude/platforms/reference/CMakeFiles/OpenMMDrudeReference.dir/depend [ 87%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaVdwForceProxy.cpp.o make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/reference /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/CMakeFiles/OpenMMDrudeReference.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaVdwForceProxy.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaVdwForceProxy.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaVdwForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/src/AmoebaVdwForceProxy.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/drude/platforms/reference/CMakeFiles/OpenMMDrudeReference.dir/build.make plugins/drude/platforms/reference/CMakeFiles/OpenMMDrudeReference.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 87%] Building CXX object plugins/drude/platforms/reference/CMakeFiles/OpenMMDrudeReference.dir/src/ReferenceDrudeKernelFactory.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMDrudeReference_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/drude/platforms/reference/CMakeFiles/OpenMMDrudeReference.dir/src/ReferenceDrudeKernelFactory.cpp.o -MF CMakeFiles/OpenMMDrudeReference.dir/src/ReferenceDrudeKernelFactory.cpp.o.d -o CMakeFiles/OpenMMDrudeReference.dir/src/ReferenceDrudeKernelFactory.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/reference/src/ReferenceDrudeKernelFactory.cpp [ 87%] Linking CXX executable ../TestSystem cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSystem.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSystem.dir/TestSystem.cpp.o -o ../TestSystem -Wl,-rpath,"\$ORIGIN" ../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 87%] Building CXX object plugins/rpmd/platforms/reference/CMakeFiles/OpenMMRPMDReference.dir/src/ReferenceRpmdKernels.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/reference && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMRPMDReference_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/rpmd/platforms/reference/CMakeFiles/OpenMMRPMDReference.dir/src/ReferenceRpmdKernels.cpp.o -MF CMakeFiles/OpenMMRPMDReference.dir/src/ReferenceRpmdKernels.cpp.o.d -o CMakeFiles/OpenMMRPMDReference.dir/src/ReferenceRpmdKernels.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/reference/src/ReferenceRpmdKernels.cpp [ 87%] Linking CXX executable ../HelloArgon cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/HelloArgon.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/HelloArgon.dir/HelloArgon.cpp.o -o ../HelloArgon -Wl,-rpath,"\$ORIGIN" ../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 87%] Built target TestSystem [ 87%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForceFvec.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForceFvec.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForceFvec.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForceFvec.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src/CpuCustomNonbondedForceFvec.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 87%] Built target HelloArgon [ 87%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaWcaDispersionForceProxy.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaWcaDispersionForceProxy.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaWcaDispersionForceProxy.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaWcaDispersionForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/src/AmoebaWcaDispersionForceProxy.cpp [ 87%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForceVec4.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForceVec4.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForceVec4.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForceVec4.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src/CpuCustomNonbondedForceVec4.cpp [ 87%] Building CXX object plugins/drude/platforms/reference/CMakeFiles/OpenMMDrudeReference.dir/src/ReferenceDrudeKernels.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMDrudeReference_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/drude/platforms/reference/CMakeFiles/OpenMMDrudeReference.dir/src/ReferenceDrudeKernels.cpp.o -MF CMakeFiles/OpenMMDrudeReference.dir/src/ReferenceDrudeKernels.cpp.o.d -o CMakeFiles/OpenMMDrudeReference.dir/src/ReferenceDrudeKernels.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/reference/src/ReferenceDrudeKernels.cpp [ 87%] Linking CXX executable ../HelloSodiumChloride cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/HelloSodiumChloride.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/HelloSodiumChloride.dir/HelloSodiumChloride.cpp.o -o ../HelloSodiumChloride -Wl,-rpath,"\$ORIGIN" ../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 87%] Building CXX object plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/serialization/src/HippoNonbondedForceProxy.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoeba_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_AMOEBA_BUILDING_SHARED_LIBRARY -DLEPTON_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/CMakeFiles/OpenMMAmoeba.dir/serialization/src/HippoNonbondedForceProxy.cpp.o -MF CMakeFiles/OpenMMAmoeba.dir/serialization/src/HippoNonbondedForceProxy.cpp.o.d -o CMakeFiles/OpenMMAmoeba.dir/serialization/src/HippoNonbondedForceProxy.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/src/HippoNonbondedForceProxy.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 87%] Built target HelloSodiumChloride [ 87%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuGBSAOBCForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuGBSAOBCForce.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuGBSAOBCForce.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuGBSAOBCForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src/CpuGBSAOBCForce.cpp [ 87%] Linking CXX executable ../HelloWaterBox cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/HelloWaterBox.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/HelloWaterBox.dir/HelloWaterBox.cpp.o -o ../HelloWaterBox -Wl,-rpath,"\$ORIGIN" ../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 87%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuGayBerneForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuGayBerneForce.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuGayBerneForce.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuGayBerneForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src/CpuGayBerneForce.cpp [ 87%] Linking CXX executable ../TestSplineFitter cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSplineFitter.dir/link.txt --verbose=1 [ 87%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuKernelFactory.cpp.o /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSplineFitter.dir/TestSplineFitter.cpp.o -o ../TestSplineFitter -Wl,-rpath,"\$ORIGIN" ../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuKernelFactory.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuKernelFactory.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuKernelFactory.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src/CpuKernelFactory.cpp [ 87%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLEvent.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLEvent.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLEvent.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLEvent.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src/OpenCLEvent.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 87%] Built target HelloWaterBox [ 87%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLFFT3D.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLFFT3D.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLFFT3D.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLFFT3D.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src/OpenCLFFT3D.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 87%] Linking CXX executable ../../TestSerializeTabulatedFunctions cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/serialization/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestSerializeTabulatedFunctions.dir/link.txt --verbose=1 [ 87%] Built target TestSplineFitter /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestSerializeTabulatedFunctions.dir/TestSerializeTabulatedFunctions.cpp.o -o ../../TestSerializeTabulatedFunctions -Wl,-rpath,"\$ORIGIN" ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 87%] Linking CXX executable ../HelloEthane cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/examples && /usr/bin/cmake -E cmake_link_script CMakeFiles/HelloEthane.dir/link.txt --verbose=1 [ 87%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLIntegrationUtilities.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLIntegrationUtilities.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLIntegrationUtilities.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLIntegrationUtilities.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src/OpenCLIntegrationUtilities.cpp /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/HelloEthane.dir/HelloEthane.cpp.o -o ../HelloEthane -Wl,-rpath,"\$ORIGIN" ../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 87%] Built target HelloEthane In file included from /usr/include/CL/cl.h:20, from /build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include/vkFFT.h:57, from /build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/./include/OpenCLFFT3D.h:35, from /build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src/OpenCLFFT3D.cpp:27: /usr/include/CL/cl_version.h:22:104: note: '#pragma message: cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)' 22 | #pragma message("cl_version.h: CL_TARGET_OPENCL_VERSION is not defined. Defaulting to 300 (OpenCL 3.0)") | ^ [ 87%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernel.cpp.o [ 87%] Built target TestSerializeTabulatedFunctions cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernel.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernel.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernel.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src/OpenCLKernel.cpp [ 87%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuKernels.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuKernels.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuKernels.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuKernels.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src/CpuKernels.cpp [ 87%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuLangevinDynamics.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuLangevinDynamics.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuLangevinDynamics.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuLangevinDynamics.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src/CpuLangevinDynamics.cpp [ 87%] Linking CXX executable ../TestVectorizeAvx2 cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestVectorizeAvx2.dir/link.txt --verbose=1 [ 87%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuLangevinMiddleDynamics.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuLangevinMiddleDynamics.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuLangevinMiddleDynamics.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuLangevinMiddleDynamics.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src/CpuLangevinMiddleDynamics.cpp /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestVectorizeAvx2.dir/TestVectorizeAvx2.cpp.o -o ../TestVectorizeAvx2 -Wl,-rpath,"\$ORIGIN" ../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 87%] Linking CXX executable ../TestVectorize cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestVectorize.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestVectorize.dir/TestVectorize.cpp.o -o ../TestVectorize -Wl,-rpath,"\$ORIGIN" ../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 87%] Built target TestVectorizeAvx2 [ 87%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernelFactory.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernelFactory.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernelFactory.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernelFactory.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src/OpenCLKernelFactory.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 87%] Linking CXX executable ../TestVectorizeAvx cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestVectorizeAvx.dir/link.txt --verbose=1 [ 87%] Linking CXX shared library ../../../../libOpenMMDrudeReference.so cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMMDrudeReference.dir/link.txt --verbose=1 [ 87%] Built target TestVectorize /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestVectorizeAvx.dir/TestVectorizeAvx.cpp.o -o ../TestVectorizeAvx -Wl,-rpath,"\$ORIGIN" ../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,-z,relro -Wl,--as-needed -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libOpenMMDrudeReference.so -o ../../../../libOpenMMDrudeReference.so CMakeFiles/OpenMMDrudeReference.dir/src/ReferenceDrudeKernelFactory.cpp.o CMakeFiles/OpenMMDrudeReference.dir/src/ReferenceDrudeKernels.cpp.o -Wl,-rpath,"\$ORIGIN:" ../../../../libOpenMMDrude.so ../../../../libOpenMM.so.8.1 -lpthread /usr/lib/x86_64-linux-gnu/libdl.a [ 87%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernels.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernels.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernels.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernels.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src/OpenCLKernels.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 87%] Built target TestVectorizeAvx make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 87%] Built target OpenMMDrudeReference [ 87%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuNeighborList.cpp.o [ 89%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForce.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForce.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src/CpuNonbondedForce.cpp [ 89%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceAvx.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuNeighborList.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuNeighborList.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuNeighborList.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src/CpuNeighborList.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -mavx -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceAvx.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceAvx.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceAvx.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src/CpuNonbondedForceAvx.cpp [ 89%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceAvx2.cpp.o cd 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-I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -mavx2 -mfma -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceAvx2.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceAvx2.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceAvx2.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src/CpuNonbondedForceAvx2.cpp [ 91%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLNonbondedUtilities.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS 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-I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLNonbondedUtilities.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLNonbondedUtilities.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLNonbondedUtilities.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src/OpenCLNonbondedUtilities.cpp [ 91%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLParallelKernels.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLParallelKernels.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLParallelKernels.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLParallelKernels.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src/OpenCLParallelKernels.cpp [ 91%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLParameterSet.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLParameterSet.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLParameterSet.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLParameterSet.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src/OpenCLParameterSet.cpp [ 91%] Linking CXX shared library ../../libOpenMMAmoeba.so cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMMAmoeba.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,-z,relro -Wl,--as-needed -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libOpenMMAmoeba.so -o ../../libOpenMMAmoeba.so CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaGeneralizedKirkwoodForce.cpp.o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaGeneralizedKirkwoodForceImpl.cpp.o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaMultipoleForce.cpp.o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaMultipoleForceImpl.cpp.o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaTorsionTorsionForce.cpp.o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaTorsionTorsionForceImpl.cpp.o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaVdwForce.cpp.o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaVdwForceImpl.cpp.o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaWcaDispersionForce.cpp.o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/AmoebaWcaDispersionForceImpl.cpp.o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/HippoNonbondedForce.cpp.o CMakeFiles/OpenMMAmoeba.dir/openmmapi/src/HippoNonbondedForceImpl.cpp.o CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaGeneralizedKirkwoodForceProxy.cpp.o CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaMultipoleForceProxy.cpp.o CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaSerializationProxyRegistration.cpp.o CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaTorsionTorsionForceProxy.cpp.o CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaVdwForceProxy.cpp.o CMakeFiles/OpenMMAmoeba.dir/serialization/src/AmoebaWcaDispersionForceProxy.cpp.o CMakeFiles/OpenMMAmoeba.dir/serialization/src/HippoNonbondedForceProxy.cpp.o -Wl,-rpath,"\$ORIGIN:" /usr/lib/x86_64-linux-gnu/libdl.a ../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 91%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceFvec.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceFvec.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceFvec.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceFvec.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src/CpuNonbondedForceFvec.cpp [ 91%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLPlatform.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLPlatform.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLPlatform.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLPlatform.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src/OpenCLPlatform.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 91%] Built target OpenMMAmoeba make -f plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeForce.dir/build.make plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeForce.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeForce.dir/build.make plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 91%] Building CXX object plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeForce.dir/TestReferenceDrudeForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeForce.dir/TestReferenceDrudeForce.cpp.o -MF CMakeFiles/TestReferenceDrudeForce.dir/TestReferenceDrudeForce.cpp.o.d -o CMakeFiles/TestReferenceDrudeForce.dir/TestReferenceDrudeForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/reference/tests/TestReferenceDrudeForce.cpp [ 91%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceVec4.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceVec4.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceVec4.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceVec4.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src/CpuNonbondedForceVec4.cpp [ 91%] Linking CXX executable ../TestParser cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestParser.dir/link.txt --verbose=1 [ 91%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuPlatform.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuPlatform.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuPlatform.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuPlatform.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src/CpuPlatform.cpp /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestParser.dir/TestParser.cpp.o -o ../TestParser -Wl,-rpath,"\$ORIGIN" ../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 91%] Built target TestParser make -f plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeLangevinIntegrator.dir/build.make plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeLangevinIntegrator.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeLangevinIntegrator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeLangevinIntegrator.dir/build.make plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeLangevinIntegrator.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 91%] Building CXX object plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeLangevinIntegrator.dir/TestReferenceDrudeLangevinIntegrator.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeLangevinIntegrator.dir/TestReferenceDrudeLangevinIntegrator.cpp.o -MF CMakeFiles/TestReferenceDrudeLangevinIntegrator.dir/TestReferenceDrudeLangevinIntegrator.cpp.o.d -o CMakeFiles/TestReferenceDrudeLangevinIntegrator.dir/TestReferenceDrudeLangevinIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/reference/tests/TestReferenceDrudeLangevinIntegrator.cpp [ 91%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuRandom.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuRandom.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuRandom.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuRandom.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src/CpuRandom.cpp [ 91%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLProgram.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLProgram.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLProgram.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLProgram.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src/OpenCLProgram.cpp [ 91%] Building CXX object platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuSETTLE.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMCPU_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_CPU_BUILDING_SHARED_LIBRARY -msse2 -DLEPTON_USE_JIT -msse4.1 -MD -MT platforms/cpu/sharedTarget/CMakeFiles/OpenMMCPU.dir/__/src/CpuSETTLE.cpp.o -MF CMakeFiles/OpenMMCPU.dir/__/src/CpuSETTLE.cpp.o.d -o CMakeFiles/OpenMMCPU.dir/__/src/CpuSETTLE.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src/CpuSETTLE.cpp [ 91%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLSort.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLSort.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLSort.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLSort.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src/OpenCLSort.cpp make -f plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeNoseHoover.dir/build.make plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeNoseHoover.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeNoseHoover.dir/DependInfo.cmake "--color=" make -f plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeSCFIntegrator.dir/build.make plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeSCFIntegrator.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeSCFIntegrator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeNoseHoover.dir/build.make plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeNoseHoover.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeSCFIntegrator.dir/build.make plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeSCFIntegrator.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 91%] Building CXX object plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeNoseHoover.dir/TestReferenceDrudeNoseHoover.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeNoseHoover.dir/TestReferenceDrudeNoseHoover.cpp.o -MF CMakeFiles/TestReferenceDrudeNoseHoover.dir/TestReferenceDrudeNoseHoover.cpp.o.d -o CMakeFiles/TestReferenceDrudeNoseHoover.dir/TestReferenceDrudeNoseHoover.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/reference/tests/TestReferenceDrudeNoseHoover.cpp [ 91%] Building CXX object plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeSCFIntegrator.dir/TestReferenceDrudeSCFIntegrator.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT plugins/drude/platforms/reference/tests/CMakeFiles/TestReferenceDrudeSCFIntegrator.dir/TestReferenceDrudeSCFIntegrator.cpp.o -MF CMakeFiles/TestReferenceDrudeSCFIntegrator.dir/TestReferenceDrudeSCFIntegrator.cpp.o.d -o CMakeFiles/TestReferenceDrudeSCFIntegrator.dir/TestReferenceDrudeSCFIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/reference/tests/TestReferenceDrudeSCFIntegrator.cpp [ 91%] Linking CXX executable ../../../../../TestReferenceDrudeForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceDrudeForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceDrudeForce.dir/TestReferenceDrudeForce.cpp.o -o ../../../../../TestReferenceDrudeForce -Wl,-rpath,"\$ORIGIN" ../../../../../libOpenMMDrudeReference.so ../../../../../libOpenMMDrude.so ../../../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 91%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/CommonKernels.cpp.o [ 91%] Built target TestReferenceDrudeForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/CommonKernels.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/CommonKernels.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/CommonKernels.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/common/src/CommonKernels.cpp make -f plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/build.make plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/build.make plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 91%] Building CXX object plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/AmoebaReferenceKernelFactory.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoebaReference_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/AmoebaReferenceKernelFactory.cpp.o -MF CMakeFiles/OpenMMAmoebaReference.dir/src/AmoebaReferenceKernelFactory.cpp.o.d -o CMakeFiles/OpenMMAmoebaReference.dir/src/AmoebaReferenceKernelFactory.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src/AmoebaReferenceKernelFactory.cpp [ 91%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeArray.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeArray.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeArray.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeArray.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/common/src/ComputeArray.cpp [ 91%] Building CXX object plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/AmoebaReferenceKernels.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoebaReference_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/AmoebaReferenceKernels.cpp.o -MF CMakeFiles/OpenMMAmoebaReference.dir/src/AmoebaReferenceKernels.cpp.o.d -o CMakeFiles/OpenMMAmoebaReference.dir/src/AmoebaReferenceKernels.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src/AmoebaReferenceKernels.cpp [ 91%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeContext.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeContext.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeContext.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeContext.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/common/src/ComputeContext.cpp [ 91%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeForceInfo.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeForceInfo.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeForceInfo.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeForceInfo.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/common/src/ComputeForceInfo.cpp [ 91%] Building CXX object plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoebaReference_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceForce.cpp.o -MF CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceForce.cpp.o.d -o CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference/AmoebaReferenceForce.cpp [ 91%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeParameterSet.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeParameterSet.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeParameterSet.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeParameterSet.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/common/src/ComputeParameterSet.cpp [ 91%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ExpressionUtilities.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ExpressionUtilities.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ExpressionUtilities.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ExpressionUtilities.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/common/src/ExpressionUtilities.cpp [ 91%] Linking CXX executable ../../../../../TestReferenceDrudeLangevinIntegrator cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceDrudeLangevinIntegrator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceDrudeLangevinIntegrator.dir/TestReferenceDrudeLangevinIntegrator.cpp.o -o ../../../../../TestReferenceDrudeLangevinIntegrator -Wl,-rpath,"\$ORIGIN" ../../../../../libOpenMMDrudeReference.so ../../../../../libOpenMMDrude.so ../../../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 91%] Built target TestReferenceDrudeLangevinIntegrator [ 91%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/IntegrationUtilities.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/IntegrationUtilities.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/IntegrationUtilities.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/IntegrationUtilities.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/common/src/IntegrationUtilities.cpp [ 91%] Building CXX object plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceGeneralizedKirkwoodForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoebaReference_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceGeneralizedKirkwoodForce.cpp.o -MF CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceGeneralizedKirkwoodForce.cpp.o.d -o CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceGeneralizedKirkwoodForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference/AmoebaReferenceGeneralizedKirkwoodForce.cpp [ 91%] Linking CXX executable ../../../../../TestReferenceDrudeNoseHoover cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceDrudeNoseHoover.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceDrudeNoseHoover.dir/TestReferenceDrudeNoseHoover.cpp.o -o ../../../../../TestReferenceDrudeNoseHoover -Wl,-rpath,"\$ORIGIN" ../../../../../libOpenMMDrudeReference.so ../../../../../libOpenMMDrude.so ../../../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 91%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernelSources.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernelSources.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernelSources.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernelSources.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src/OpenCLKernelSources.cpp [ 93%] Building CXX object plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceHippoNonbondedForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoebaReference_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceHippoNonbondedForce.cpp.o -MF CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceHippoNonbondedForce.cpp.o.d -o CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceHippoNonbondedForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference/AmoebaReferenceHippoNonbondedForce.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 93%] Linking CXX executable ../../../../../TestReferenceDrudeSCFIntegrator cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceDrudeSCFIntegrator.dir/link.txt --verbose=1 [ 93%] Built target TestReferenceDrudeNoseHoover /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceDrudeSCFIntegrator.dir/TestReferenceDrudeSCFIntegrator.cpp.o -o ../../../../../TestReferenceDrudeSCFIntegrator -Wl,-rpath,"\$ORIGIN" ../../../../../libOpenMMDrudeReference.so ../../../../../libOpenMMDrude.so ../../../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 93%] Building CXX object plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceMultipoleForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoebaReference_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceMultipoleForce.cpp.o -MF CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceMultipoleForce.cpp.o.d -o CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceMultipoleForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference/AmoebaReferenceMultipoleForce.cpp [ 93%] Building CXX object platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/CommonKernelSources.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_COMMON_BUILDING_SHARED_LIBRARY -MD -MT platforms/opencl/sharedTarget/CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/CommonKernelSources.cpp.o -MF CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/CommonKernelSources.cpp.o.d -o CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/CommonKernelSources.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/common/src/CommonKernelSources.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 93%] Built target TestReferenceDrudeSCFIntegrator [ 93%] Building CXX object plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceTorsionTorsionForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoebaReference_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceTorsionTorsionForce.cpp.o -MF CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceTorsionTorsionForce.cpp.o.d -o CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceTorsionTorsionForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference/AmoebaReferenceTorsionTorsionForce.cpp [ 93%] Building CXX object plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceVdwForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoebaReference_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceVdwForce.cpp.o -MF CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceVdwForce.cpp.o.d -o CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceVdwForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference/AmoebaReferenceVdwForce.cpp [ 93%] Building CXX object plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceWcaDispersionForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoebaReference_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/platforms/reference/CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceWcaDispersionForce.cpp.o -MF CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceWcaDispersionForce.cpp.o.d -o CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceWcaDispersionForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference/AmoebaReferenceWcaDispersionForce.cpp [ 93%] Linking CXX shared library ../../libOpenMMPME.so cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/cpupme && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMMPME.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,-z,relro -Wl,--as-needed -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libOpenMMPME.so -o ../../libOpenMMPME.so CMakeFiles/OpenMMPME.dir/src/CpuPmeKernelFactory.cpp.o CMakeFiles/OpenMMPME.dir/src/CpuPmeKernels.cpp.o -Wl,-rpath,"\$ORIGIN:" ../../libOpenMM.so.8.1 -lpthread /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 93%] Built target OpenMMPME make -f plugins/cpupme/tests/CMakeFiles/TestCpuPme.dir/build.make plugins/cpupme/tests/CMakeFiles/TestCpuPme.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/plugins/cpupme/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/cpupme/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/cpupme/tests/CMakeFiles/TestCpuPme.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/cpupme/tests/CMakeFiles/TestCpuPme.dir/build.make plugins/cpupme/tests/CMakeFiles/TestCpuPme.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 93%] Building CXX object plugins/cpupme/tests/CMakeFiles/TestCpuPme.dir/TestCpuPme.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/cpupme/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/cpupme/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/cpupme/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/include/pocketfft -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT plugins/cpupme/tests/CMakeFiles/TestCpuPme.dir/TestCpuPme.cpp.o -MF CMakeFiles/TestCpuPme.dir/TestCpuPme.cpp.o.d -o CMakeFiles/TestCpuPme.dir/TestCpuPme.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/cpupme/tests/TestCpuPme.cpp [ 93%] Linking CXX executable ../../../TestCpuPme cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/cpupme/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuPme.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestCpuPme.dir/TestCpuPme.cpp.o -o ../../../TestCpuPme -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMPME.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 93%] Built target TestCpuPme [ 93%] Linking CXX shared library ../../../libOpenMMCPU.so cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/sharedTarget && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMMCPU.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,-z,relro -Wl,--as-needed -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libOpenMMCPU.so -o ../../../libOpenMMCPU.so CMakeFiles/OpenMMCPU.dir/__/src/CpuBondForce.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomGBForce.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomManyParticleForce.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForce.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForceAvx.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForceFvec.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuCustomNonbondedForceVec4.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuGBSAOBCForce.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuGayBerneForce.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuKernelFactory.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuKernels.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuLangevinDynamics.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuLangevinMiddleDynamics.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuNeighborList.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForce.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceAvx.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceAvx2.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceFvec.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuNonbondedForceVec4.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuPlatform.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuRandom.cpp.o CMakeFiles/OpenMMCPU.dir/__/src/CpuSETTLE.cpp.o -Wl,-rpath,"\$ORIGIN:" ../../../libOpenMM.so.8.1 -lpthread /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 93%] Linking CXX shared library ../../../../libOpenMMRPMDReference.so cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/reference && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMMRPMDReference.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,-z,relro -Wl,--as-needed -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libOpenMMRPMDReference.so -o ../../../../libOpenMMRPMDReference.so CMakeFiles/OpenMMRPMDReference.dir/src/ReferenceRpmdKernelFactory.cpp.o CMakeFiles/OpenMMRPMDReference.dir/src/ReferenceRpmdKernels.cpp.o -Wl,-rpath,"\$ORIGIN:" ../../../../libOpenMMRPMD.so ../../../../libOpenMM.so.8.1 -lpthread /usr/lib/x86_64-linux-gnu/libdl.a make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 93%] Built target OpenMMRPMDReference make -f plugins/rpmd/platforms/reference/tests/CMakeFiles/TestReferenceRpmd.dir/build.make plugins/rpmd/platforms/reference/tests/CMakeFiles/TestReferenceRpmd.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/reference/tests/CMakeFiles/TestReferenceRpmd.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/rpmd/platforms/reference/tests/CMakeFiles/TestReferenceRpmd.dir/build.make plugins/rpmd/platforms/reference/tests/CMakeFiles/TestReferenceRpmd.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 93%] Building CXX object plugins/rpmd/platforms/reference/tests/CMakeFiles/TestReferenceRpmd.dir/TestReferenceRpmd.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/reference/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT plugins/rpmd/platforms/reference/tests/CMakeFiles/TestReferenceRpmd.dir/TestReferenceRpmd.cpp.o -MF CMakeFiles/TestReferenceRpmd.dir/TestReferenceRpmd.cpp.o.d -o CMakeFiles/TestReferenceRpmd.dir/TestReferenceRpmd.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/reference/tests/TestReferenceRpmd.cpp [ 93%] Built target OpenMMCPU make -f platforms/cpu/tests/CMakeFiles/TestCpuCheckpoints.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuCheckpoints.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuCheckpoints.dir/DependInfo.cmake "--color=" make -f platforms/cpu/tests/CMakeFiles/TestCpuCompoundIntegrator.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuCompoundIntegrator.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuCompoundIntegrator.dir/DependInfo.cmake "--color=" make -f platforms/cpu/tests/CMakeFiles/TestCpuCustomCPPForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuCustomCPPForce.dir/depend make -f platforms/cpu/tests/CMakeFiles/TestCpuCustomGBForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuCustomGBForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuCustomCPPForce.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuCustomGBForce.dir/DependInfo.cmake "--color=" make -f platforms/cpu/tests/CMakeFiles/TestCpuCheckpoints.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuCheckpoints.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/cpu/tests/CMakeFiles/TestCpuCustomManyParticleForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuCustomManyParticleForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuCustomManyParticleForce.dir/DependInfo.cmake "--color=" make -f platforms/cpu/tests/CMakeFiles/TestCpuCustomNonbondedForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuCustomNonbondedForce.dir/depend make -f platforms/cpu/tests/CMakeFiles/TestCpuDispersionPME.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuDispersionPME.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/cpu/tests/CMakeFiles/TestCpuEwald.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuEwald.dir/depend cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuCustomNonbondedForce.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuDispersionPME.dir/DependInfo.cmake "--color=" make -f platforms/cpu/tests/CMakeFiles/TestCpuCustomCPPForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuCustomCPPForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuEwald.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/cpu/tests/CMakeFiles/TestCpuCompoundIntegrator.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuCompoundIntegrator.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/cpu/tests/CMakeFiles/TestCpuCustomNonbondedForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuCustomNonbondedForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/cpu/tests/CMakeFiles/TestCpuGBSAOBCForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuGBSAOBCForce.dir/depend [ 93%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuCheckpoints.dir/TestCpuCheckpoints.cpp.o make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuGBSAOBCForce.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/cpu/tests/CMakeFiles/TestCpuCustomGBForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuCustomGBForce.dir/build [ 93%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuCompoundIntegrator.dir/TestCpuCompoundIntegrator.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuCompoundIntegrator.dir/TestCpuCompoundIntegrator.cpp.o -MF CMakeFiles/TestCpuCompoundIntegrator.dir/TestCpuCompoundIntegrator.cpp.o.d -o CMakeFiles/TestCpuCompoundIntegrator.dir/TestCpuCompoundIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests/TestCpuCompoundIntegrator.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuCheckpoints.dir/TestCpuCheckpoints.cpp.o -MF CMakeFiles/TestCpuCheckpoints.dir/TestCpuCheckpoints.cpp.o.d -o CMakeFiles/TestCpuCheckpoints.dir/TestCpuCheckpoints.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests/TestCpuCheckpoints.cpp make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/cpu/tests/CMakeFiles/TestCpuCustomManyParticleForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuCustomManyParticleForce.dir/build make -f platforms/cpu/tests/CMakeFiles/TestCpuGayBerneForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuGayBerneForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 93%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuCustomCPPForce.dir/TestCpuCustomCPPForce.cpp.o make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuGayBerneForce.dir/DependInfo.cmake "--color=" make -f platforms/cpu/tests/CMakeFiles/TestCpuDispersionPME.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuDispersionPME.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuCustomCPPForce.dir/TestCpuCustomCPPForce.cpp.o -MF CMakeFiles/TestCpuCustomCPPForce.dir/TestCpuCustomCPPForce.cpp.o.d -o CMakeFiles/TestCpuCustomCPPForce.dir/TestCpuCustomCPPForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests/TestCpuCustomCPPForce.cpp make -f platforms/cpu/tests/CMakeFiles/TestCpuHarmonicAngleForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuHarmonicAngleForce.dir/depend make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuHarmonicAngleForce.dir/DependInfo.cmake "--color=" make -f platforms/cpu/tests/CMakeFiles/TestCpuEwald.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuEwald.dir/build [ 93%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuCustomManyParticleForce.dir/TestCpuCustomManyParticleForce.cpp.o [ 93%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuCustomNonbondedForce.dir/TestCpuCustomNonbondedForce.cpp.o [ 93%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuCustomGBForce.dir/TestCpuCustomGBForce.cpp.o make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/cpu/tests/CMakeFiles/TestCpuLangevinIntegrator.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuLangevinIntegrator.dir/depend cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuCustomManyParticleForce.dir/TestCpuCustomManyParticleForce.cpp.o -MF CMakeFiles/TestCpuCustomManyParticleForce.dir/TestCpuCustomManyParticleForce.cpp.o.d -o CMakeFiles/TestCpuCustomManyParticleForce.dir/TestCpuCustomManyParticleForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests/TestCpuCustomManyParticleForce.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuCustomNonbondedForce.dir/TestCpuCustomNonbondedForce.cpp.o -MF CMakeFiles/TestCpuCustomNonbondedForce.dir/TestCpuCustomNonbondedForce.cpp.o.d -o CMakeFiles/TestCpuCustomNonbondedForce.dir/TestCpuCustomNonbondedForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests/TestCpuCustomNonbondedForce.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuCustomGBForce.dir/TestCpuCustomGBForce.cpp.o -MF CMakeFiles/TestCpuCustomGBForce.dir/TestCpuCustomGBForce.cpp.o.d -o CMakeFiles/TestCpuCustomGBForce.dir/TestCpuCustomGBForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests/TestCpuCustomGBForce.cpp make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuLangevinIntegrator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/cpu/tests/CMakeFiles/TestCpuGBSAOBCForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuGBSAOBCForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/cpu/tests/CMakeFiles/TestCpuGayBerneForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuGayBerneForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 93%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuDispersionPME.dir/TestCpuDispersionPME.cpp.o make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/cpu/tests/CMakeFiles/TestCpuHarmonicAngleForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuHarmonicAngleForce.dir/build cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuDispersionPME.dir/TestCpuDispersionPME.cpp.o -MF CMakeFiles/TestCpuDispersionPME.dir/TestCpuDispersionPME.cpp.o.d -o CMakeFiles/TestCpuDispersionPME.dir/TestCpuDispersionPME.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests/TestCpuDispersionPME.cpp make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 93%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuEwald.dir/TestCpuEwald.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuEwald.dir/TestCpuEwald.cpp.o -MF CMakeFiles/TestCpuEwald.dir/TestCpuEwald.cpp.o.d -o CMakeFiles/TestCpuEwald.dir/TestCpuEwald.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests/TestCpuEwald.cpp [ 93%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuGayBerneForce.dir/TestCpuGayBerneForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuGayBerneForce.dir/TestCpuGayBerneForce.cpp.o -MF CMakeFiles/TestCpuGayBerneForce.dir/TestCpuGayBerneForce.cpp.o.d -o CMakeFiles/TestCpuGayBerneForce.dir/TestCpuGayBerneForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests/TestCpuGayBerneForce.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/cpu/tests/CMakeFiles/TestCpuLangevinIntegrator.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuLangevinIntegrator.dir/build [ 93%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuGBSAOBCForce.dir/TestCpuGBSAOBCForce.cpp.o make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuGBSAOBCForce.dir/TestCpuGBSAOBCForce.cpp.o -MF CMakeFiles/TestCpuGBSAOBCForce.dir/TestCpuGBSAOBCForce.cpp.o.d -o CMakeFiles/TestCpuGBSAOBCForce.dir/TestCpuGBSAOBCForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests/TestCpuGBSAOBCForce.cpp [ 93%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuHarmonicAngleForce.dir/TestCpuHarmonicAngleForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuHarmonicAngleForce.dir/TestCpuHarmonicAngleForce.cpp.o -MF CMakeFiles/TestCpuHarmonicAngleForce.dir/TestCpuHarmonicAngleForce.cpp.o.d -o CMakeFiles/TestCpuHarmonicAngleForce.dir/TestCpuHarmonicAngleForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests/TestCpuHarmonicAngleForce.cpp [ 93%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuLangevinIntegrator.dir/TestCpuLangevinIntegrator.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuLangevinIntegrator.dir/TestCpuLangevinIntegrator.cpp.o -MF CMakeFiles/TestCpuLangevinIntegrator.dir/TestCpuLangevinIntegrator.cpp.o.d -o CMakeFiles/TestCpuLangevinIntegrator.dir/TestCpuLangevinIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests/TestCpuLangevinIntegrator.cpp make -f platforms/cpu/tests/CMakeFiles/TestCpuLangevinMiddleIntegrator.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuLangevinMiddleIntegrator.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuLangevinMiddleIntegrator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/cpu/tests/CMakeFiles/TestCpuLangevinMiddleIntegrator.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuLangevinMiddleIntegrator.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 93%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuLangevinMiddleIntegrator.dir/TestCpuLangevinMiddleIntegrator.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuLangevinMiddleIntegrator.dir/TestCpuLangevinMiddleIntegrator.cpp.o -MF CMakeFiles/TestCpuLangevinMiddleIntegrator.dir/TestCpuLangevinMiddleIntegrator.cpp.o.d -o CMakeFiles/TestCpuLangevinMiddleIntegrator.dir/TestCpuLangevinMiddleIntegrator.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests/TestCpuLangevinMiddleIntegrator.cpp make -f platforms/cpu/tests/CMakeFiles/TestCpuNeighborList.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuNeighborList.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuNeighborList.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/cpu/tests/CMakeFiles/TestCpuNeighborList.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuNeighborList.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 93%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuNeighborList.dir/TestCpuNeighborList.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuNeighborList.dir/TestCpuNeighborList.cpp.o -MF CMakeFiles/TestCpuNeighborList.dir/TestCpuNeighborList.cpp.o.d -o CMakeFiles/TestCpuNeighborList.dir/TestCpuNeighborList.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests/TestCpuNeighborList.cpp [ 93%] Linking CXX executable ../../../TestCpuCheckpoints cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuCheckpoints.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestCpuCheckpoints.dir/TestCpuCheckpoints.cpp.o -o ../../../TestCpuCheckpoints -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 93%] Built target TestCpuCheckpoints make -f platforms/cpu/tests/CMakeFiles/TestCpuNonbondedForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuNonbondedForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuNonbondedForce.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/cpu/tests/CMakeFiles/TestCpuNonbondedForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuNonbondedForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 95%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuNonbondedForce.dir/TestCpuNonbondedForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuNonbondedForce.dir/TestCpuNonbondedForce.cpp.o -MF CMakeFiles/TestCpuNonbondedForce.dir/TestCpuNonbondedForce.cpp.o.d -o CMakeFiles/TestCpuNonbondedForce.dir/TestCpuNonbondedForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests/TestCpuNonbondedForce.cpp [ 95%] Linking CXX executable ../../../TestCpuCustomCPPForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuCustomCPPForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestCpuCustomCPPForce.dir/TestCpuCustomCPPForce.cpp.o -o ../../../TestCpuCustomCPPForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 95%] Linking CXX executable ../../../TestCpuNeighborList cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuNeighborList.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestCpuNeighborList.dir/TestCpuNeighborList.cpp.o -o ../../../TestCpuNeighborList -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 95%] Built target TestCpuCustomCPPForce make -f platforms/cpu/tests/CMakeFiles/TestCpuPeriodicTorsionForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuPeriodicTorsionForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuPeriodicTorsionForce.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/cpu/tests/CMakeFiles/TestCpuPeriodicTorsionForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuPeriodicTorsionForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 95%] Built target TestCpuNeighborList make -f platforms/cpu/tests/CMakeFiles/TestCpuRBTorsionForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuRBTorsionForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuRBTorsionForce.dir/DependInfo.cmake "--color=" [ 95%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuPeriodicTorsionForce.dir/TestCpuPeriodicTorsionForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuPeriodicTorsionForce.dir/TestCpuPeriodicTorsionForce.cpp.o -MF CMakeFiles/TestCpuPeriodicTorsionForce.dir/TestCpuPeriodicTorsionForce.cpp.o.d -o CMakeFiles/TestCpuPeriodicTorsionForce.dir/TestCpuPeriodicTorsionForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests/TestCpuPeriodicTorsionForce.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/cpu/tests/CMakeFiles/TestCpuRBTorsionForce.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuRBTorsionForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 95%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuRBTorsionForce.dir/TestCpuRBTorsionForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuRBTorsionForce.dir/TestCpuRBTorsionForce.cpp.o -MF CMakeFiles/TestCpuRBTorsionForce.dir/TestCpuRBTorsionForce.cpp.o.d -o CMakeFiles/TestCpuRBTorsionForce.dir/TestCpuRBTorsionForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests/TestCpuRBTorsionForce.cpp [ 95%] Linking CXX executable ../../../TestCpuGayBerneForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuGayBerneForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestCpuGayBerneForce.dir/TestCpuGayBerneForce.cpp.o -o ../../../TestCpuGayBerneForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 95%] Linking CXX executable ../../../TestCpuLangevinIntegrator cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuLangevinIntegrator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestCpuLangevinIntegrator.dir/TestCpuLangevinIntegrator.cpp.o -o ../../../TestCpuLangevinIntegrator -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 95%] Linking CXX executable ../../../../../TestReferenceRpmd cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceRpmd.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceRpmd.dir/TestReferenceRpmd.cpp.o -o ../../../../../TestReferenceRpmd -Wl,-rpath,"\$ORIGIN" ../../../../../libOpenMMRPMDReference.so ../../../../../libOpenMMRPMD.so ../../../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 95%] Built target TestCpuGayBerneForce make -f platforms/cpu/tests/CMakeFiles/TestCpuSettle.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuSettle.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests/CMakeFiles/TestCpuSettle.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f platforms/cpu/tests/CMakeFiles/TestCpuSettle.dir/build.make platforms/cpu/tests/CMakeFiles/TestCpuSettle.dir/build [ 95%] Linking CXX executable ../../../TestCpuGBSAOBCForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuGBSAOBCForce.dir/link.txt --verbose=1 make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 95%] Building CXX object platforms/cpu/tests/CMakeFiles/TestCpuSettle.dir/TestCpuSettle.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT platforms/cpu/tests/CMakeFiles/TestCpuSettle.dir/TestCpuSettle.cpp.o -MF CMakeFiles/TestCpuSettle.dir/TestCpuSettle.cpp.o.d -o CMakeFiles/TestCpuSettle.dir/TestCpuSettle.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/platforms/cpu/tests/TestCpuSettle.cpp /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestCpuGBSAOBCForce.dir/TestCpuGBSAOBCForce.cpp.o -o ../../../TestCpuGBSAOBCForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 95%] Built target TestCpuLangevinIntegrator make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 95%] Built target TestReferenceRpmd make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 95%] Built target TestCpuGBSAOBCForce [ 95%] Linking CXX executable ../../../TestCpuHarmonicAngleForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuHarmonicAngleForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestCpuHarmonicAngleForce.dir/TestCpuHarmonicAngleForce.cpp.o -o ../../../TestCpuHarmonicAngleForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 95%] Built target TestCpuHarmonicAngleForce [ 95%] Linking CXX executable ../../../TestCpuLangevinMiddleIntegrator cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuLangevinMiddleIntegrator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestCpuLangevinMiddleIntegrator.dir/TestCpuLangevinMiddleIntegrator.cpp.o -o ../../../TestCpuLangevinMiddleIntegrator -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 95%] Built target TestCpuLangevinMiddleIntegrator [ 95%] Linking CXX executable ../../../TestCpuSettle cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuSettle.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestCpuSettle.dir/TestCpuSettle.cpp.o -o ../../../TestCpuSettle -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 95%] Linking CXX executable ../../../TestCpuCompoundIntegrator make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuCompoundIntegrator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestCpuCompoundIntegrator.dir/TestCpuCompoundIntegrator.cpp.o -o ../../../TestCpuCompoundIntegrator -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 95%] Built target TestCpuSettle make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 95%] Built target TestCpuCompoundIntegrator [ 95%] Linking CXX executable ../../../TestCpuRBTorsionForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuRBTorsionForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestCpuRBTorsionForce.dir/TestCpuRBTorsionForce.cpp.o -o ../../../TestCpuRBTorsionForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 95%] Built target TestCpuRBTorsionForce [ 95%] Linking CXX executable ../../../TestCpuPeriodicTorsionForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuPeriodicTorsionForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestCpuPeriodicTorsionForce.dir/TestCpuPeriodicTorsionForce.cpp.o -o ../../../TestCpuPeriodicTorsionForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 97%] Linking CXX executable ../../../TestCpuCustomManyParticleForce make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuCustomManyParticleForce.dir/link.txt --verbose=1 [ 97%] Built target TestCpuPeriodicTorsionForce /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestCpuCustomManyParticleForce.dir/TestCpuCustomManyParticleForce.cpp.o -o ../../../TestCpuCustomManyParticleForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [ 97%] Linking CXX executable ../../../TestCpuCustomGBForce make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuCustomGBForce.dir/link.txt --verbose=1 [ 97%] Built target TestCpuCustomManyParticleForce /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestCpuCustomGBForce.dir/TestCpuCustomGBForce.cpp.o -o ../../../TestCpuCustomGBForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 97%] Built target TestCpuCustomGBForce [ 97%] Linking CXX executable ../../../TestCpuDispersionPME cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuDispersionPME.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestCpuDispersionPME.dir/TestCpuDispersionPME.cpp.o -o ../../../TestCpuDispersionPME -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 97%] Built target TestCpuDispersionPME [ 97%] Linking CXX executable ../../../TestCpuCustomNonbondedForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuCustomNonbondedForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestCpuCustomNonbondedForce.dir/TestCpuCustomNonbondedForce.cpp.o -o ../../../TestCpuCustomNonbondedForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 97%] Built target TestCpuCustomNonbondedForce [ 97%] Linking CXX executable ../../../TestCpuNonbondedForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuNonbondedForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestCpuNonbondedForce.dir/TestCpuNonbondedForce.cpp.o -o ../../../TestCpuNonbondedForce -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 97%] Built target TestCpuNonbondedForce [ 97%] Linking CXX executable ../../../TestCpuEwald cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/cpu/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestCpuEwald.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestCpuEwald.dir/TestCpuEwald.cpp.o -o ../../../TestCpuEwald -Wl,-rpath,"\$ORIGIN" ../../../libOpenMMCPU.so ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 97%] Built target TestCpuEwald [ 97%] Linking CXX shared library ../../../../libOpenMMAmoebaReference.so cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMMAmoebaReference.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,-z,relro -Wl,--as-needed -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libOpenMMAmoebaReference.so -o ../../../../libOpenMMAmoebaReference.so CMakeFiles/OpenMMAmoebaReference.dir/src/AmoebaReferenceKernelFactory.cpp.o CMakeFiles/OpenMMAmoebaReference.dir/src/AmoebaReferenceKernels.cpp.o CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceForce.cpp.o CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceGeneralizedKirkwoodForce.cpp.o CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceHippoNonbondedForce.cpp.o CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceMultipoleForce.cpp.o CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceTorsionTorsionForce.cpp.o CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceVdwForce.cpp.o CMakeFiles/OpenMMAmoebaReference.dir/src/SimTKReference/AmoebaReferenceWcaDispersionForce.cpp.o -Wl,-rpath,"\$ORIGIN:" ../../../../libOpenMMAmoeba.so ../../../../libOpenMM.so.8.1 -lpthread /usr/lib/x86_64-linux-gnu/libdl.a make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [ 97%] Built target OpenMMAmoebaReference make -f plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaExtrapolatedPolarization.dir/build.make plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaExtrapolatedPolarization.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaExtrapolatedPolarization.dir/DependInfo.cmake "--color=" make -f plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaGeneralizedKirkwoodForce.dir/build.make plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaGeneralizedKirkwoodForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaGeneralizedKirkwoodForce.dir/DependInfo.cmake "--color=" make -f plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaMultipoleForce.dir/build.make plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaMultipoleForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaMultipoleForce.dir/DependInfo.cmake "--color=" make -f plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaTorsionTorsionForce.dir/build.make plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaTorsionTorsionForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaTorsionTorsionForce.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaExtrapolatedPolarization.dir/build.make plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaExtrapolatedPolarization.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaVdwForce.dir/build.make plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaVdwForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaVdwForce.dir/DependInfo.cmake "--color=" make -f plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceHippoNonbondedForce.dir/build.make plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceHippoNonbondedForce.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceHippoNonbondedForce.dir/DependInfo.cmake "--color=" make -f plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceWcaDispersionForce.dir/build.make plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceWcaDispersionForce.dir/depend make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaMultipoleForce.dir/build.make plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaMultipoleForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceWcaDispersionForce.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaTorsionTorsionForce.dir/build.make plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaTorsionTorsionForce.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [100%] Building CXX object plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaExtrapolatedPolarization.dir/TestReferenceAmoebaExtrapolatedPolarization.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaExtrapolatedPolarization.dir/TestReferenceAmoebaExtrapolatedPolarization.cpp.o -MF CMakeFiles/TestReferenceAmoebaExtrapolatedPolarization.dir/TestReferenceAmoebaExtrapolatedPolarization.cpp.o.d -o CMakeFiles/TestReferenceAmoebaExtrapolatedPolarization.dir/TestReferenceAmoebaExtrapolatedPolarization.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/tests/TestReferenceAmoebaExtrapolatedPolarization.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaGeneralizedKirkwoodForce.dir/build.make plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaGeneralizedKirkwoodForce.dir/build [100%] Building CXX object plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaTorsionTorsionForce.dir/TestReferenceAmoebaTorsionTorsionForce.cpp.o make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaVdwForce.dir/build.make plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaVdwForce.dir/build cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaTorsionTorsionForce.dir/TestReferenceAmoebaTorsionTorsionForce.cpp.o -MF CMakeFiles/TestReferenceAmoebaTorsionTorsionForce.dir/TestReferenceAmoebaTorsionTorsionForce.cpp.o.d -o CMakeFiles/TestReferenceAmoebaTorsionTorsionForce.dir/TestReferenceAmoebaTorsionTorsionForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/tests/TestReferenceAmoebaTorsionTorsionForce.cpp make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [100%] Building CXX object plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaMultipoleForce.dir/TestReferenceAmoebaMultipoleForce.cpp.o make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceWcaDispersionForce.dir/build.make plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceWcaDispersionForce.dir/build cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaMultipoleForce.dir/TestReferenceAmoebaMultipoleForce.cpp.o -MF CMakeFiles/TestReferenceAmoebaMultipoleForce.dir/TestReferenceAmoebaMultipoleForce.cpp.o.d -o CMakeFiles/TestReferenceAmoebaMultipoleForce.dir/TestReferenceAmoebaMultipoleForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/tests/TestReferenceAmoebaMultipoleForce.cpp make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceHippoNonbondedForce.dir/build.make plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceHippoNonbondedForce.dir/build [100%] Building CXX object plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaVdwForce.dir/TestReferenceAmoebaVdwForce.cpp.o make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaVdwForce.dir/TestReferenceAmoebaVdwForce.cpp.o -MF CMakeFiles/TestReferenceAmoebaVdwForce.dir/TestReferenceAmoebaVdwForce.cpp.o.d -o CMakeFiles/TestReferenceAmoebaVdwForce.dir/TestReferenceAmoebaVdwForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/tests/TestReferenceAmoebaVdwForce.cpp [100%] Building CXX object plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaGeneralizedKirkwoodForce.dir/TestReferenceAmoebaGeneralizedKirkwoodForce.cpp.o [100%] Building CXX object plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceWcaDispersionForce.dir/TestReferenceWcaDispersionForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceWcaDispersionForce.dir/TestReferenceWcaDispersionForce.cpp.o -MF CMakeFiles/TestReferenceWcaDispersionForce.dir/TestReferenceWcaDispersionForce.cpp.o.d -o CMakeFiles/TestReferenceWcaDispersionForce.dir/TestReferenceWcaDispersionForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/tests/TestReferenceWcaDispersionForce.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceAmoebaGeneralizedKirkwoodForce.dir/TestReferenceAmoebaGeneralizedKirkwoodForce.cpp.o -MF CMakeFiles/TestReferenceAmoebaGeneralizedKirkwoodForce.dir/TestReferenceAmoebaGeneralizedKirkwoodForce.cpp.o.d -o CMakeFiles/TestReferenceAmoebaGeneralizedKirkwoodForce.dir/TestReferenceAmoebaGeneralizedKirkwoodForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/tests/TestReferenceAmoebaGeneralizedKirkwoodForce.cpp [100%] Building CXX object plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceHippoNonbondedForce.dir/TestReferenceHippoNonbondedForce.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src/SimTKReference -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/tests -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -msse2 -DLEPTON_USE_JIT -MD -MT plugins/amoeba/platforms/reference/tests/CMakeFiles/TestReferenceHippoNonbondedForce.dir/TestReferenceHippoNonbondedForce.cpp.o -MF CMakeFiles/TestReferenceHippoNonbondedForce.dir/TestReferenceHippoNonbondedForce.cpp.o.d -o CMakeFiles/TestReferenceHippoNonbondedForce.dir/TestReferenceHippoNonbondedForce.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/reference/tests/TestReferenceHippoNonbondedForce.cpp [100%] Linking CXX executable ../../../../../TestReferenceWcaDispersionForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceWcaDispersionForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceWcaDispersionForce.dir/TestReferenceWcaDispersionForce.cpp.o -o ../../../../../TestReferenceWcaDispersionForce -Wl,-rpath,"\$ORIGIN" ../../../../../libOpenMMAmoebaReference.so ../../../../../libOpenMMAmoeba.so ../../../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread [100%] Linking CXX executable ../../../../../TestReferenceAmoebaGeneralizedKirkwoodForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceAmoebaGeneralizedKirkwoodForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceAmoebaGeneralizedKirkwoodForce.dir/TestReferenceAmoebaGeneralizedKirkwoodForce.cpp.o -o ../../../../../TestReferenceAmoebaGeneralizedKirkwoodForce -Wl,-rpath,"\$ORIGIN" ../../../../../libOpenMMAmoebaReference.so ../../../../../libOpenMMAmoeba.so ../../../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [100%] Linking CXX executable ../../../../../TestReferenceAmoebaTorsionTorsionForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceAmoebaTorsionTorsionForce.dir/link.txt --verbose=1 [100%] Built target TestReferenceWcaDispersionForce /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceAmoebaTorsionTorsionForce.dir/TestReferenceAmoebaTorsionTorsionForce.cpp.o -o ../../../../../TestReferenceAmoebaTorsionTorsionForce -Wl,-rpath,"\$ORIGIN" ../../../../../libOpenMMAmoebaReference.so ../../../../../libOpenMMAmoeba.so ../../../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [100%] Built target TestReferenceAmoebaGeneralizedKirkwoodForce make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [100%] Built target TestReferenceAmoebaTorsionTorsionForce [100%] Linking CXX executable ../../../../../TestReferenceAmoebaExtrapolatedPolarization cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceAmoebaExtrapolatedPolarization.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceAmoebaExtrapolatedPolarization.dir/TestReferenceAmoebaExtrapolatedPolarization.cpp.o -o ../../../../../TestReferenceAmoebaExtrapolatedPolarization -Wl,-rpath,"\$ORIGIN" ../../../../../libOpenMMAmoebaReference.so ../../../../../libOpenMMAmoeba.so ../../../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [100%] Built target TestReferenceAmoebaExtrapolatedPolarization [100%] Linking CXX executable ../../../../../TestReferenceHippoNonbondedForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceHippoNonbondedForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceHippoNonbondedForce.dir/TestReferenceHippoNonbondedForce.cpp.o -o ../../../../../TestReferenceHippoNonbondedForce -Wl,-rpath,"\$ORIGIN" ../../../../../libOpenMMAmoebaReference.so ../../../../../libOpenMMAmoeba.so ../../../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [100%] Built target TestReferenceHippoNonbondedForce [100%] Linking CXX executable ../../../../../TestReferenceAmoebaVdwForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceAmoebaVdwForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceAmoebaVdwForce.dir/TestReferenceAmoebaVdwForce.cpp.o -o ../../../../../TestReferenceAmoebaVdwForce -Wl,-rpath,"\$ORIGIN" ../../../../../libOpenMMAmoebaReference.so ../../../../../libOpenMMAmoeba.so ../../../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [100%] Built target TestReferenceAmoebaVdwForce [100%] Linking CXX executable ../../../../../TestReferenceAmoebaMultipoleForce cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/reference/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/TestReferenceAmoebaMultipoleForce.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt CMakeFiles/TestReferenceAmoebaMultipoleForce.dir/TestReferenceAmoebaMultipoleForce.cpp.o -o ../../../../../TestReferenceAmoebaMultipoleForce -Wl,-rpath,"\$ORIGIN" ../../../../../libOpenMMAmoebaReference.so ../../../../../libOpenMMAmoeba.so ../../../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [100%] Built target TestReferenceAmoebaMultipoleForce [100%] Linking CXX shared library ../../../libOpenMMOpenCL.so cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/sharedTarget && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMMOpenCL.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,-z,relro -Wl,--as-needed -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libOpenMMOpenCL.so -o ../../../libOpenMMOpenCL.so CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLArray.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLBondedUtilities.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLCompact.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLContext.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLEvent.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLFFT3D.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLIntegrationUtilities.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernel.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernelFactory.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernels.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLNonbondedUtilities.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLParallelKernels.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLParameterSet.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLPlatform.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLProgram.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLSort.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/CommonKernels.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeArray.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeContext.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeForceInfo.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ComputeParameterSet.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/ExpressionUtilities.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/IntegrationUtilities.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/src/OpenCLKernelSources.cpp.o CMakeFiles/OpenMMOpenCL.dir/__/__/common/src/CommonKernelSources.cpp.o -Wl,-rpath,"\$ORIGIN:" ../../../libOpenMM.so.8.1 /usr/lib/x86_64-linux-gnu/libOpenCL.so -lpthread /usr/lib/x86_64-linux-gnu/libdl.a -lpthread make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [100%] Built target OpenMMOpenCL make -f plugins/amoeba/platforms/opencl/CMakeFiles/OpenMMAmoebaOpenCL.dir/build.make plugins/amoeba/platforms/opencl/CMakeFiles/OpenMMAmoebaOpenCL.dir/depend make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/rpmd/platforms/opencl/CMakeFiles/OpenMMRPMDOpenCL.dir/build.make plugins/rpmd/platforms/opencl/CMakeFiles/OpenMMRPMDOpenCL.dir/depend cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/opencl /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/opencl /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/opencl/CMakeFiles/OpenMMAmoebaOpenCL.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/drude/platforms/opencl/CMakeFiles/OpenMMDrudeOpenCL.dir/build.make plugins/drude/platforms/opencl/CMakeFiles/OpenMMDrudeOpenCL.dir/depend cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/opencl /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/opencl /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/opencl/CMakeFiles/OpenMMRPMDOpenCL.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/openmm-8.1.1+dfsg /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/opencl /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/opencl /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/opencl/CMakeFiles/OpenMMDrudeOpenCL.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/rpmd/platforms/opencl/CMakeFiles/OpenMMRPMDOpenCL.dir/build.make plugins/rpmd/platforms/opencl/CMakeFiles/OpenMMRPMDOpenCL.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/drude/platforms/opencl/CMakeFiles/OpenMMDrudeOpenCL.dir/build.make plugins/drude/platforms/opencl/CMakeFiles/OpenMMDrudeOpenCL.dir/build make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make -f plugins/amoeba/platforms/opencl/CMakeFiles/OpenMMAmoebaOpenCL.dir/build.make plugins/amoeba/platforms/opencl/CMakeFiles/OpenMMAmoebaOpenCL.dir/build make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [100%] Building CXX object plugins/amoeba/platforms/opencl/CMakeFiles/OpenMMAmoebaOpenCL.dir/src/AmoebaOpenCLKernelFactory.cpp.o [100%] Building CXX object plugins/rpmd/platforms/opencl/CMakeFiles/OpenMMRPMDOpenCL.dir/__/common/src/CommonRpmdKernels.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/opencl && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMRPMDOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/rpmd/platforms/opencl/CMakeFiles/OpenMMRPMDOpenCL.dir/__/common/src/CommonRpmdKernels.cpp.o -MF CMakeFiles/OpenMMRPMDOpenCL.dir/__/common/src/CommonRpmdKernels.cpp.o.d -o CMakeFiles/OpenMMRPMDOpenCL.dir/__/common/src/CommonRpmdKernels.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/common/src/CommonRpmdKernels.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/opencl && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoebaOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/platforms/opencl/CMakeFiles/OpenMMAmoebaOpenCL.dir/src/AmoebaOpenCLKernelFactory.cpp.o -MF CMakeFiles/OpenMMAmoebaOpenCL.dir/src/AmoebaOpenCLKernelFactory.cpp.o.d -o CMakeFiles/OpenMMAmoebaOpenCL.dir/src/AmoebaOpenCLKernelFactory.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/opencl/src/AmoebaOpenCLKernelFactory.cpp [100%] Building CXX object plugins/amoeba/platforms/opencl/CMakeFiles/OpenMMAmoebaOpenCL.dir/__/common/src/AmoebaCommonKernels.cpp.o [100%] Building CXX object plugins/rpmd/platforms/opencl/CMakeFiles/OpenMMRPMDOpenCL.dir/__/common/src/CommonRpmdKernelSources.cpp.o [100%] Building CXX object plugins/rpmd/platforms/opencl/CMakeFiles/OpenMMRPMDOpenCL.dir/src/OpenCLRpmdKernelFactory.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/opencl && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMRPMDOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/rpmd/platforms/opencl/CMakeFiles/OpenMMRPMDOpenCL.dir/__/common/src/CommonRpmdKernelSources.cpp.o -MF CMakeFiles/OpenMMRPMDOpenCL.dir/__/common/src/CommonRpmdKernelSources.cpp.o.d -o CMakeFiles/OpenMMRPMDOpenCL.dir/__/common/src/CommonRpmdKernelSources.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/common/src/CommonRpmdKernelSources.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/opencl && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoebaOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/platforms/opencl/CMakeFiles/OpenMMAmoebaOpenCL.dir/__/common/src/AmoebaCommonKernels.cpp.o -MF CMakeFiles/OpenMMAmoebaOpenCL.dir/__/common/src/AmoebaCommonKernels.cpp.o.d -o CMakeFiles/OpenMMAmoebaOpenCL.dir/__/common/src/AmoebaCommonKernels.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/common/src/AmoebaCommonKernels.cpp [100%] Building CXX object plugins/drude/platforms/opencl/CMakeFiles/OpenMMDrudeOpenCL.dir/__/common/src/CommonDrudeKernels.cpp.o [100%] Building CXX object plugins/drude/platforms/opencl/CMakeFiles/OpenMMDrudeOpenCL.dir/src/OpenCLDrudeKernelFactory.cpp.o [100%] Building CXX object plugins/amoeba/platforms/opencl/CMakeFiles/OpenMMAmoebaOpenCL.dir/src/AmoebaOpenCLKernels.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/opencl && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMRPMDOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/rpmd/platforms/opencl/CMakeFiles/OpenMMRPMDOpenCL.dir/src/OpenCLRpmdKernelFactory.cpp.o -MF CMakeFiles/OpenMMRPMDOpenCL.dir/src/OpenCLRpmdKernelFactory.cpp.o.d -o CMakeFiles/OpenMMRPMDOpenCL.dir/src/OpenCLRpmdKernelFactory.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/platforms/opencl/src/OpenCLRpmdKernelFactory.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/opencl && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMDrudeOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/drude/platforms/opencl/CMakeFiles/OpenMMDrudeOpenCL.dir/__/common/src/CommonDrudeKernels.cpp.o -MF CMakeFiles/OpenMMDrudeOpenCL.dir/__/common/src/CommonDrudeKernels.cpp.o.d -o CMakeFiles/OpenMMDrudeOpenCL.dir/__/common/src/CommonDrudeKernels.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/common/src/CommonDrudeKernels.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/opencl && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoebaOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/platforms/opencl/CMakeFiles/OpenMMAmoebaOpenCL.dir/src/AmoebaOpenCLKernels.cpp.o -MF CMakeFiles/OpenMMAmoebaOpenCL.dir/src/AmoebaOpenCLKernels.cpp.o.d -o CMakeFiles/OpenMMAmoebaOpenCL.dir/src/AmoebaOpenCLKernels.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/opencl/src/AmoebaOpenCLKernels.cpp [100%] Building CXX object plugins/drude/platforms/opencl/CMakeFiles/OpenMMDrudeOpenCL.dir/__/common/src/CommonDrudeKernelSources.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/opencl && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMDrudeOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/drude/platforms/opencl/CMakeFiles/OpenMMDrudeOpenCL.dir/src/OpenCLDrudeKernelFactory.cpp.o -MF CMakeFiles/OpenMMDrudeOpenCL.dir/src/OpenCLDrudeKernelFactory.cpp.o.d -o CMakeFiles/OpenMMDrudeOpenCL.dir/src/OpenCLDrudeKernelFactory.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/opencl/src/OpenCLDrudeKernelFactory.cpp [100%] Building CXX object plugins/amoeba/platforms/opencl/CMakeFiles/OpenMMAmoebaOpenCL.dir/__/common/src/CommonAmoebaKernelSources.cpp.o cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/opencl && /usr/bin/c++ -DOPENMM_AMOEBA_BUILD_VERSION=0 -DOPENMM_AMOEBA_LIBRARY_NAME=OpenMMAmoeba -DOPENMM_AMOEBA_MAJOR_VERSION=1 -DOPENMM_AMOEBA_MINOR_VERSION=0 -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMAmoebaOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/amoeba/platforms/opencl/CMakeFiles/OpenMMAmoebaOpenCL.dir/__/common/src/CommonAmoebaKernelSources.cpp.o -MF CMakeFiles/OpenMMAmoebaOpenCL.dir/__/common/src/CommonAmoebaKernelSources.cpp.o.d -o CMakeFiles/OpenMMAmoebaOpenCL.dir/__/common/src/CommonAmoebaKernelSources.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/common/src/CommonAmoebaKernelSources.cpp cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/opencl && /usr/bin/c++ -DOPENMM_BUILD_VERSION=1 -DOPENMM_LIBRARY_NAME=OpenMM -DOPENMM_MAJOR_VERSION=8 -DOPENMM_MINOR_VERSION=1 -DOpenMMDrudeOpenCL_EXPORTS -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/opencl/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/opencl/../common/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/opencl/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/opencl/../common/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/platforms/opencl/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/src -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/src -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/asmjit -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vecmath/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/irrxml/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/platforms/reference/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/vkfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/pocketfft/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/csha1/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/hilbert/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lbfgs/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/sfmt/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/lepton/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/quern/include -I/build/reproducible-path/openmm-8.1.1+dfsg/libraries/jama/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/./include -I/build/reproducible-path/openmm-8.1.1+dfsg/tests -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -std=gnu++11 -fPIC -msse2 -DLEPTON_USE_JIT -DOPENMM_BUILDING_SHARED_LIBRARY -MD -MT plugins/drude/platforms/opencl/CMakeFiles/OpenMMDrudeOpenCL.dir/__/common/src/CommonDrudeKernelSources.cpp.o -MF CMakeFiles/OpenMMDrudeOpenCL.dir/__/common/src/CommonDrudeKernelSources.cpp.o.d -o CMakeFiles/OpenMMDrudeOpenCL.dir/__/common/src/CommonDrudeKernelSources.cpp.o -c /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/common/src/CommonDrudeKernelSources.cpp [100%] Linking CXX shared library ../../../../libOpenMMDrudeOpenCL.so cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/drude/platforms/opencl && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMMDrudeOpenCL.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,-z,relro -Wl,--as-needed -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libOpenMMDrudeOpenCL.so -o ../../../../libOpenMMDrudeOpenCL.so CMakeFiles/OpenMMDrudeOpenCL.dir/src/OpenCLDrudeKernelFactory.cpp.o CMakeFiles/OpenMMDrudeOpenCL.dir/__/common/src/CommonDrudeKernels.cpp.o CMakeFiles/OpenMMDrudeOpenCL.dir/__/common/src/CommonDrudeKernelSources.cpp.o -Wl,-rpath,"\$ORIGIN:" /usr/lib/x86_64-linux-gnu/libOpenCL.so -lpthread ../../../../libOpenMMOpenCL.so ../../../../libOpenMMDrude.so /usr/lib/x86_64-linux-gnu/libOpenCL.so ../../../../libOpenMM.so.8.1 -lpthread /usr/lib/x86_64-linux-gnu/libdl.a make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [100%] Built target OpenMMDrudeOpenCL [100%] Linking CXX shared library ../../../../libOpenMMRPMDOpenCL.so cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/rpmd/platforms/opencl && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMMRPMDOpenCL.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -msse2 -DLEPTON_USE_JIT -Wl,--no-as-needed -lrt -Wl,-z,relro -Wl,--as-needed -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libOpenMMRPMDOpenCL.so -o ../../../../libOpenMMRPMDOpenCL.so CMakeFiles/OpenMMRPMDOpenCL.dir/src/OpenCLRpmdKernelFactory.cpp.o CMakeFiles/OpenMMRPMDOpenCL.dir/__/common/src/CommonRpmdKernels.cpp.o CMakeFiles/OpenMMRPMDOpenCL.dir/__/common/src/CommonRpmdKernelSources.cpp.o -Wl,-rpath,"\$ORIGIN:" /usr/lib/x86_64-linux-gnu/libOpenCL.so -lpthread ../../../../libOpenMMOpenCL.so ../../../../libOpenMMRPMD.so /usr/lib/x86_64-linux-gnu/libOpenCL.so ../../../../libOpenMM.so.8.1 -lpthread /usr/lib/x86_64-linux-gnu/libdl.a make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [100%] Built target OpenMMRPMDOpenCL [100%] Linking CXX shared library ../../../../libOpenMMAmoebaOpenCL.so cd /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/plugins/amoeba/platforms/opencl && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMMAmoebaOpenCL.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -g -O2 -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wl,-z,relro -Wl,--as-needed -Wl,-z,relro -Wl,--as-needed -shared -Wl,-soname,libOpenMMAmoebaOpenCL.so -o ../../../../libOpenMMAmoebaOpenCL.so CMakeFiles/OpenMMAmoebaOpenCL.dir/src/AmoebaOpenCLKernelFactory.cpp.o CMakeFiles/OpenMMAmoebaOpenCL.dir/src/AmoebaOpenCLKernels.cpp.o CMakeFiles/OpenMMAmoebaOpenCL.dir/__/common/src/AmoebaCommonKernels.cpp.o CMakeFiles/OpenMMAmoebaOpenCL.dir/__/common/src/CommonAmoebaKernelSources.cpp.o -Wl,-rpath,"\$ORIGIN:" -lpthread ../../../../libOpenMMOpenCL.so ../../../../libOpenMMAmoeba.so /usr/lib/x86_64-linux-gnu/libOpenCL.so ../../../../libOpenMM.so.8.1 -lpthread /usr/lib/x86_64-linux-gnu/libdl.a make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' [100%] Built target OpenMMAmoebaOpenCL make[2]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' debian/rules execute_after_dh_auto_build make[1]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg' pybuild --dir obj-x86_64-linux-gnu/python --build I: pybuild base:311: /usr/bin/python3.12 setup.py build Compiling openmm/app/internal/compiled.pyx because it changed. [1/1] Cythonizing openmm/app/internal/compiled.pyx /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/openmm/app/internal/xtc_utils/xtc.pyx tree = Parsing.p_module(s, pxd, full_module_name) Compiling openmm/app/internal/xtc_utils/xtc.pyx because it changed. [1/1] Cythonizing openmm/app/internal/xtc_utils/xtc.pyx author Peter Eastman data_files [] description Python wrapper for OpenMM (a C++ MD package) download_url https://openmm.org ext_modules[, , ] license Python Software Foundation License (BSD-like) long_descriptionOpenMM is a toolkit for molecular simulation. It can be used either as a stand-alone application for running simulations, or as a library you call from your own code. It provides a combination of extreme flexibility (through custom forces and integrators), openness, and high performance (especially on recent GPUs) that make it truly unique among simulation codes. name OpenMM package_data{'openmm': [], 'openmm.app': ['data/*.xml', 'data/*.pdb', 'data/amber14/*.xml', 'data/charmm36/*.xml', 'data/implicit/*.xml'], 'openmm.app.internal': []} packages['simtk', 'simtk.unit', 'simtk.openmm', 'simtk.openmm.app', 'openmm', 'openmm.unit', 'openmm', 'openmm.app', 'openmm.app.internal', 'openmm.app.internal.charmm', 'openmm.app.internal.pdbx', 'openmm.app.internal.pdbx.reader', 'openmm.app.internal.pdbx.writer'] platforms ['Linux', 'Mac OS X', 'Windows'] url https://openmm.org version 8.1.1 running build running build_py creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/simtk copying simtk/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/simtk creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/simtk/unit copying simtk/unit/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/simtk/unit creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/simtk/openmm copying simtk/openmm/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/simtk/openmm creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/simtk/openmm/app copying simtk/openmm/app/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/simtk/openmm/app creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm copying openmm/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm copying openmm/amd.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm copying openmm/openmm.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm copying openmm/version.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm copying openmm/vec3.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm copying openmm/mtsintegrator.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm copying openmm/testInstallation.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit copying openmm/unit/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit copying openmm/unit/unit.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit copying openmm/unit/constants.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit copying openmm/unit/doctests.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit copying openmm/unit/unit_operators.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit copying openmm/unit/quantity.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit copying openmm/unit/standard_dimensions.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit copying openmm/unit/basedimension.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit copying openmm/unit/mymatrix.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit copying openmm/unit/unit_definitions.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit copying openmm/unit/unit_math.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit copying openmm/unit/prefix.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit copying openmm/unit/baseunit.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/xtcfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/statedatareporter.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/xtcreporter.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/topology.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/pdbfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/amberprmtopfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/metadynamics.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/charmmpsffile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/modeller.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/pdbreporter.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/element.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/simulatedtempering.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/desmonddmsfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/amberinpcrdfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/pdbxfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/charmmcrdfiles.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/dcdreporter.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/checkpointreporter.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/dcdfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/gromacsgrofile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/charmmparameterset.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/simulation.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/gromacstopfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app copying openmm/app/forcefield.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal copying openmm/app/internal/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal copying openmm/app/internal/singleton.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal copying openmm/app/internal/amber_file_parser.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal copying openmm/app/internal/pdbstructure.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal copying openmm/app/internal/unitcell.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal copying openmm/app/internal/customgbforces.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal copying openmm/app/internal/argtracker.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/charmm copying openmm/app/internal/charmm/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/charmm copying openmm/app/internal/charmm/_charmmfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/charmm copying openmm/app/internal/charmm/topologyobjects.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/charmm copying openmm/app/internal/charmm/exceptions.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/charmm creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx copying openmm/app/internal/pdbx/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader copying openmm/app/internal/pdbx/reader/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader copying openmm/app/internal/pdbx/reader/PdbxContainers.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader copying openmm/app/internal/pdbx/reader/PdbxReader.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader copying openmm/app/internal/pdbx/reader/PdbxParser.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader copying openmm/app/internal/pdbx/reader/PdbxReaderTests.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader copying openmm/app/internal/pdbx/reader/PdbxReadWriteTests.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/writer copying openmm/app/internal/pdbx/writer/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/writer copying openmm/app/internal/pdbx/writer/PdbxWriterTests.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/writer copying openmm/app/internal/pdbx/writer/PdbxWriter.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/writer creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amber96_obc.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/absinth.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amber96.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/tip4pfb.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amber03_obc.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amber99sbnmr.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/opc.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/charmm36.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amoeba2013.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/glycam-hydrogens.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/tip5p.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amber99Test.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amoeba2009.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amber99_obc.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amberfb15.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/tip4pew.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/spce.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/pdbNames.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/iamoeba.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/swm4ndp.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amber99sb.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amber14-all.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amber10.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/tip3pfb.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/residues.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/tip3p.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/charmm_polar_2013.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amber99sbildn.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/opc3.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/hydrogens.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amber10_obc.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/charmm_polar_2019.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amoeba2018.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amoeba2018_gk.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amoeba2009_gk.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amoeba2013_gk.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/amber03.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/DMPC.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/swm4ndp.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/tip5p.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/DPPC.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/POPE.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/POPC.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/tip3p.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/spce.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/DLPE.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/tip4pew.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/DOPC.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/test.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data copying openmm/app/data/DLPC.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/lipid17.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/tip4pfb.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/protein.ff15ipq.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/opc.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/DNA.bsc1.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/DNA.OL15.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/tip4pew.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/spce.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/RNA.OL3.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/tip3pfb.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/tip3p.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/opc3.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/protein.ff14SB.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 copying openmm/app/data/amber14/GLYCAM_06j-1.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14 creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/tip3p-pme-b.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/tip3p-pme-f.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/water.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/tip5p.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/tip4pew.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/spce.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/tip5pew.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/tip4p2005.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36 creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/implicit copying openmm/app/data/implicit/obc2.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/implicit copying openmm/app/data/implicit/gbn2.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/implicit copying openmm/app/data/implicit/gbn.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/implicit copying openmm/app/data/implicit/obc1.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/implicit copying openmm/app/data/implicit/hct.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/implicit running build_ext building 'openmm._openmm' extension creating build creating build/temp.linux-x86_64-cpython-312 creating build/temp.linux-x86_64-cpython-312/src creating build/temp.linux-x86_64-cpython-312/src/swig_doxygen x86_64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -fPIC -DMAJOR_VERSION=8 -DMINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c src/swig_doxygen/OpenMMSwig.cxx -o build/temp.linux-x86_64-cpython-312/src/swig_doxygen/OpenMMSwig.o -std=c++11 cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5, from src/swig_doxygen/OpenMMSwig.cxx:7360: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ In file included from /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/OpenMM.h:53, from src/swig_doxygen/OpenMMSwig.cxx:7346: /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/GayBerneForce.h: In constructor 'OpenMM::GayBerneForce::ParticleInfo::ParticleInfo(double, double, int, int, double, double, double, double, double, double)': /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/GayBerneForce.h:286:19: warning: 'OpenMM::GayBerneForce::ParticleInfo::epsilon' will be initialized after [-Wreorder] 286 | double sigma, epsilon, sx, sy, sz, ex, ey, ez; | ^~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/GayBerneForce.h:285:9: warning: 'int OpenMM::GayBerneForce::ParticleInfo::xparticle' [-Wreorder] 285 | int xparticle, yparticle; | ^~~~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/GayBerneForce.h:291:5: warning: when initialized here [-Wreorder] 291 | ParticleInfo(double sigma, double epsilon, int xparticle, int yparticle, double sx, double sy, double sz, double ex, double ey, double ez) : | ^~~~~~~~~~~~ In file included from /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/OpenMM.h:65: /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/NonbondedForce.h: In constructor 'OpenMM::NonbondedForce::ParticleOffsetInfo::ParticleOffsetInfo(int, int, double, double, double)': /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/NonbondedForce.h:694:19: warning: 'OpenMM::NonbondedForce::ParticleOffsetInfo::parameter' will be initialized after [-Wreorder] 694 | int particle, parameter; | ^~~~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/NonbondedForce.h:694:9: warning: 'int OpenMM::NonbondedForce::ParticleOffsetInfo::particle' [-Wreorder] 694 | int particle, parameter; | ^~~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/NonbondedForce.h:700:5: warning: when initialized here [-Wreorder] 700 | ParticleOffsetInfo(int parameter, int particle, double chargeScale, double sigmaScale, double epsilonScale) : | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/NonbondedForce.h: In constructor 'OpenMM::NonbondedForce::ExceptionOffsetInfo::ExceptionOffsetInfo(int, int, double, double, double)': /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/NonbondedForce.h:711:20: warning: 'OpenMM::NonbondedForce::ExceptionOffsetInfo::parameter' will be initialized after [-Wreorder] 711 | int exception, parameter; | ^~~~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/NonbondedForce.h:711:9: warning: 'int OpenMM::NonbondedForce::ExceptionOffsetInfo::exception' [-Wreorder] 711 | int exception, parameter; | ^~~~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/NonbondedForce.h:717:5: warning: when initialized here [-Wreorder] 717 | ExceptionOffsetInfo(int parameter, int exception, double chargeProdScale, double sigmaScale, double epsilonScale) : | ^~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/OpenMMAmoeba.h:38, from src/swig_doxygen/OpenMMSwig.cxx:7347: /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/AmoebaVdwForce.h: In constructor 'OpenMM::AmoebaVdwForce::VdwInfo::VdwInfo(int, double, double, int, double, bool)': /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/AmoebaVdwForce.h:492:36: warning: 'OpenMM::AmoebaVdwForce::VdwInfo::epsilon' will be initialized after [-Wreorder] 492 | double reductionFactor, sigma, epsilon, cutoff; | ^~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/AmoebaVdwForce.h:491:22: warning: 'int OpenMM::AmoebaVdwForce::VdwInfo::typeIndex' [-Wreorder] 491 | int parentIndex, typeIndex; | ^~~~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/AmoebaVdwForce.h:501:5: warning: when initialized here [-Wreorder] 501 | VdwInfo(int parentIndex, double sigma, double epsilon, int typeIndex, double reductionFactor, bool isAlchemical) : | ^~~~~~~ In file included from /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/OpenMMAmoeba.h:40: /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/HippoNonbondedForce.h: In constructor 'OpenMM::HippoNonbondedForce::ParticleInfo::ParticleInfo(double, const std::vector >&, const std::vector >&, double, double, double, double, double, double, double, double, double, int, int, int, int)': /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/HippoNonbondedForce.h:407:33: warning: 'OpenMM::HippoNonbondedForce::ParticleInfo::quadrupole' will be initialized after [-Wreorder] 407 | std::vector dipole, quadrupole; | ^~~~~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/HippoNonbondedForce.h:406:20: warning: 'double OpenMM::HippoNonbondedForce::ParticleInfo::coreCharge' [-Wreorder] 406 | double charge, coreCharge, alpha, epsilon, damping, c6, pauliK, pauliQ, pauliAlpha, polarizability; | ^~~~~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/HippoNonbondedForce.h:414:5: warning: when initialized here [-Wreorder] 414 | ParticleInfo(double charge, const std::vector& dipole, const std::vector& quadrupole, double coreCharge, | ^~~~~~~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/HippoNonbondedForce.h:406:89: warning: 'OpenMM::HippoNonbondedForce::ParticleInfo::polarizability' will be initialized after [-Wreorder] 406 | double charge, coreCharge, alpha, epsilon, damping, c6, pauliK, pauliQ, pauliAlpha, polarizability; | ^~~~~~~~~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/HippoNonbondedForce.h:405:9: warning: 'int OpenMM::HippoNonbondedForce::ParticleInfo::axisType' [-Wreorder] 405 | int axisType, multipoleAtomZ, multipoleAtomX, multipoleAtomY; | ^~~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/HippoNonbondedForce.h:414:5: warning: when initialized here [-Wreorder] 414 | ParticleInfo(double charge, const std::vector& dipole, const std::vector& quadrupole, double coreCharge, | ^~~~~~~~~~~~ In file included from /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/State.h:35, from /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/Integrator.h:35, from /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/BrownianIntegrator.h:35, from /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/OpenMM.h:36: /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/Vec3.h: At global scope: /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/Vec3.h:160:13: warning: 'OpenMM::Vec3 OpenMM::operator*(double, Vec3)' defined but not used [-Wunused-function] 160 | static Vec3 operator*(double lhs, Vec3 rhs) { | ^~~~~~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomHbondForce_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:100019:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 100019 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:99944:25: note: declared here 99944 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomHbondForce_addFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:99843:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 99843 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:99772:25: note: declared here 99772 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomManyParticleForce_setParticleParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:89502:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 89502 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:89460:25: note: declared here 89460 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:89505:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 89505 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:89460:25: note: declared here 89460 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_Discrete3DFunction_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:84222:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 84222 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:84177:25: note: declared here 84177 | std::vector< double > v5 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_Continuous2DFunction_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:72346:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 72346 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:72250:25: note: declared here 72250 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:72349:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 72349 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:72250:25: note: declared here 72250 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_AmoebaMultipoleForce_setExtrapolationCoefficients(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:69050:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 69050 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:69020:25: note: declared here 69020 | std::vector< double > v2 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_AmoebaMultipoleForce_setMultipoleParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:68685:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 68685 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:68559:25: note: declared here 68559 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:68686:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 68686 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:68561:25: note: declared here 68561 | std::vector< double > v5 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:68689:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 68689 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:68559:25: note: declared here 68559 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_AmoebaMultipoleForce_addMultipole(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:68389:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 68389 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:68267:25: note: declared here 68267 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:68390:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 68390 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:68269:25: note: declared here 68269 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:68393:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 68393 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:68267:25: note: declared here 68267 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:68393:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 68393 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:68267:25: note: declared here 68267 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:68393:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 68393 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:68267:25: note: declared here 68267 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:68393:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 68393 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:68267:25: note: declared here 68267 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_HippoNonbondedForce_setParticleParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:59937:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 59937 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:59727:25: note: declared here 59727 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:59938:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 59938 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:59729:25: note: declared here 59729 | std::vector< double > v5 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:59941:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 59941 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:59727:25: note: declared here 59727 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_HippoNonbondedForce_addParticle(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:59491:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 59491 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:59285:25: note: declared here 59285 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:59492:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 59492 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:59287:25: note: declared here 59287 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:59495:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 59495 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:59285:25: note: declared here 59285 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_HippoNonbondedForce_setExtrapolationCoefficients(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:58805:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 58805 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:58775:25: note: declared here 58775 | std::vector< double > v2 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_Continuous3DFunction_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:56849:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 56849 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:56720:25: note: declared here 56720 | std::vector< double > v5 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:56852:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 56852 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:56720:25: note: declared here 56720 | std::vector< double > v5 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_Discrete2DFunction_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:53338:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 53338 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:53298:25: note: declared here 53298 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomGBForce_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:53014:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 53014 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:52939:25: note: declared here 52939 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomGBForce_addFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:52838:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 52838 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:52767:25: note: declared here 52767 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomGBForce_setParticleParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:51830:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 51830 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:51795:25: note: declared here 51795 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_Continuous1DFunction_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:50379:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 50379 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:50321:25: note: declared here 50321 | std::vector< double > v2 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:50382:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 50382 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:50321:25: note: declared here 50321 | std::vector< double > v2 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomCompoundBondForce_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:49250:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 49250 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:49175:25: note: declared here 49175 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomCompoundBondForce_addFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:49074:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 49074 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:49003:25: note: declared here 49003 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomNonbondedForce_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:41531:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 41531 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:41456:25: note: declared here 41456 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomNonbondedForce_addFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:41355:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 41355 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:41284:25: note: declared here 41284 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomNonbondedForce_setParticleParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:40685:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 40685 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:40650:25: note: declared here 40650 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CMAPTorsionForce_setMapParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:38536:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 38536 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:38496:25: note: declared here 38496 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CMAPTorsionForce_addMap(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:38417:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 38417 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:38381:25: note: declared here 38381 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_Discrete1DFunction_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:38079:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 38079 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:38049:25: note: declared here 38049 | std::vector< double > v2 ; | ^~ In function 'PyObject* _wrap_CustomTorsionForce_setTorsionParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomTorsionForce_setTorsionParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:104202:79: src/swig_doxygen/OpenMMSwig.cxx:104039:35: warning: 'void operator delete(void*)' called on unallocated object 'v7' [-Wfree-nonheap-object] 104039 | if (SWIG_IsNewObj(res7)) delete arg7; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomTorsionForce_setTorsionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:103985:25: note: declared here 103985 | std::vector< double > v7 ; | ^~ In function 'PyObject* _wrap_CustomTorsionForce_addTorsion__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomTorsionForce_addTorsion(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:103857:67: src/swig_doxygen/OpenMMSwig.cxx:103712:35: warning: 'void operator delete(void*)' called on unallocated object 'v6' [-Wfree-nonheap-object] 103712 | if (SWIG_IsNewObj(res6)) delete arg6; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomTorsionForce_addTorsion(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:103662:25: note: declared here 103662 | std::vector< double > v6 ; | ^~ In function 'PyObject* _wrap_CustomHbondForce_setAcceptorParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomHbondForce_setAcceptorParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:99217:76: src/swig_doxygen/OpenMMSwig.cxx:99073:35: warning: 'void operator delete(void*)' called on unallocated object 'v6' [-Wfree-nonheap-object] 99073 | if (SWIG_IsNewObj(res6)) delete arg6; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomHbondForce_setAcceptorParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:99024:25: note: declared here 99024 | std::vector< double > v6 ; | ^~ In function 'PyObject* _wrap_CustomHbondForce_addAcceptor__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomHbondForce_addAcceptor(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:98910:64: src/swig_doxygen/OpenMMSwig.cxx:98784:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 98784 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomHbondForce_addAcceptor(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:98739:25: note: declared here 98739 | std::vector< double > v5 ; | ^~ In function 'PyObject* _wrap_CustomHbondForce_setDonorParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomHbondForce_setDonorParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:98706:73: src/swig_doxygen/OpenMMSwig.cxx:98562:35: warning: 'void operator delete(void*)' called on unallocated object 'v6' [-Wfree-nonheap-object] 98562 | if (SWIG_IsNewObj(res6)) delete arg6; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomHbondForce_setDonorParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:98513:25: note: declared here 98513 | std::vector< double > v6 ; | ^~ In function 'PyObject* _wrap_CustomHbondForce_addDonor__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomHbondForce_addDonor(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:98399:61: src/swig_doxygen/OpenMMSwig.cxx:98273:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 98273 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomHbondForce_addDonor(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:98228:25: note: declared here 98228 | std::vector< double > v5 ; | ^~ In function 'PyObject* _wrap_CustomManyParticleForce_addParticle__SWIG_1(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomManyParticleForce_addParticle(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:89353:65: src/swig_doxygen/OpenMMSwig.cxx:89284:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 89284 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomManyParticleForce_addParticle(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:89254:25: note: declared here 89254 | std::vector< double > v2 ; | ^~ In function 'PyObject* _wrap_CustomManyParticleForce_addParticle__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomManyParticleForce_addParticle(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:89375:67: src/swig_doxygen/OpenMMSwig.cxx:89240:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 89240 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomManyParticleForce_addParticle(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:89203:25: note: declared here 89203 | std::vector< double > v2 ; | ^~ In function 'PyObject* _wrap_CustomManyParticleForce_addParticle__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomManyParticleForce_addParticle(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:89375:67: src/swig_doxygen/OpenMMSwig.cxx:89243:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 89243 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomManyParticleForce_addParticle(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:89203:25: note: declared here 89203 | std::vector< double > v2 ; | ^~ In function 'PyObject* _wrap_new_Discrete3DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Discrete3DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:84385:56: src/swig_doxygen/OpenMMSwig.cxx:84082:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 84082 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Discrete3DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:84042:25: note: declared here 84042 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_new_Continuous2DFunction__SWIG_1(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous2DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:72536:64: src/swig_doxygen/OpenMMSwig.cxx:72124:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 72124 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous2DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:72033:25: note: declared here 72033 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_new_Continuous2DFunction__SWIG_1(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous2DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:72536:64: src/swig_doxygen/OpenMMSwig.cxx:72127:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 72127 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous2DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:72033:25: note: declared here 72033 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_new_Continuous2DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous2DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:72601:66: src/swig_doxygen/OpenMMSwig.cxx:72012:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 72012 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous2DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:71914:25: note: declared here 71914 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_new_Continuous2DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous2DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:72601:66: src/swig_doxygen/OpenMMSwig.cxx:72015:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 72015 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous2DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:71914:25: note: declared here 71914 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_new_Continuous3DFunction__SWIG_1(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous3DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:57060:70: src/swig_doxygen/OpenMMSwig.cxx:56559:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 56559 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous3DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:56435:25: note: declared here 56435 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_new_Continuous3DFunction__SWIG_1(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous3DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:57060:70: src/swig_doxygen/OpenMMSwig.cxx:56562:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 56562 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous3DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:56435:25: note: declared here 56435 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_new_Continuous3DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous3DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:57149:72: src/swig_doxygen/OpenMMSwig.cxx:56409:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 56409 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous3DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:56278:25: note: declared here 56278 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_new_Continuous3DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous3DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:57149:72: src/swig_doxygen/OpenMMSwig.cxx:56412:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 56412 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous3DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:56278:25: note: declared here 56278 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_CustomExternalForce_setParticleParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomExternalForce_setParticleParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:54524:75: src/swig_doxygen/OpenMMSwig.cxx:54418:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 54418 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomExternalForce_setParticleParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:54379:25: note: declared here 54379 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_CustomExternalForce_addParticle__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomExternalForce_addParticle(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:54293:63: src/swig_doxygen/OpenMMSwig.cxx:54205:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 54205 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomExternalForce_addParticle(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:54170:25: note: declared here 54170 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_new_Discrete2DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Discrete2DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:53496:54: src/swig_doxygen/OpenMMSwig.cxx:53216:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 53216 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Discrete2DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:53181:25: note: declared here 53181 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_CustomGBForce_addParticle__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomGBForce_addParticle(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:51723:55: src/swig_doxygen/OpenMMSwig.cxx:51654:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 51654 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomGBForce_addParticle(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:51624:25: note: declared here 51624 | std::vector< double > v2 ; | ^~ In function 'PyObject* _wrap_new_Continuous1DFunction__SWIG_1(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous1DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:50543:56: src/swig_doxygen/OpenMMSwig.cxx:50243:35: warning: 'void operator delete(void*)' called on unallocated object 'v1' [-Wfree-nonheap-object] 50243 | if (SWIG_IsNewObj(res1)) delete arg1; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous1DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:50190:25: note: declared here 50190 | std::vector< double > v1 ; | ^~ In function 'PyObject* _wrap_new_Continuous1DFunction__SWIG_1(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous1DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:50543:56: src/swig_doxygen/OpenMMSwig.cxx:50246:35: warning: 'void operator delete(void*)' called on unallocated object 'v1' [-Wfree-nonheap-object] 50246 | if (SWIG_IsNewObj(res1)) delete arg1; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous1DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:50190:25: note: declared here 50190 | std::vector< double > v1 ; | ^~ In function 'PyObject* _wrap_new_Continuous1DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous1DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:50578:58: src/swig_doxygen/OpenMMSwig.cxx:50177:35: warning: 'void operator delete(void*)' called on unallocated object 'v1' [-Wfree-nonheap-object] 50177 | if (SWIG_IsNewObj(res1)) delete arg1; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous1DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:50117:25: note: declared here 50117 | std::vector< double > v1 ; | ^~ In function 'PyObject* _wrap_new_Continuous1DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous1DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:50578:58: src/swig_doxygen/OpenMMSwig.cxx:50180:35: warning: 'void operator delete(void*)' called on unallocated object 'v1' [-Wfree-nonheap-object] 50180 | if (SWIG_IsNewObj(res1)) delete arg1; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous1DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:50117:25: note: declared here 50117 | std::vector< double > v1 ; | ^~ In function 'PyObject* _wrap_CustomNonbondedForce_addParticle__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomNonbondedForce_addParticle(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:40578:62: src/swig_doxygen/OpenMMSwig.cxx:40509:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 40509 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomNonbondedForce_addParticle(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:40479:25: note: declared here 40479 | std::vector< double > v2 ; | ^~ In function 'PyObject* _wrap_CustomAngleForce_setAngleParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomAngleForce_setAngleParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:36810:73: src/swig_doxygen/OpenMMSwig.cxx:36666:35: warning: 'void operator delete(void*)' called on unallocated object 'v6' [-Wfree-nonheap-object] 36666 | if (SWIG_IsNewObj(res6)) delete arg6; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomAngleForce_setAngleParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:36617:25: note: declared here 36617 | std::vector< double > v6 ; | ^~ In function 'PyObject* _wrap_CustomAngleForce_addAngle__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomAngleForce_addAngle(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:36503:61: src/swig_doxygen/OpenMMSwig.cxx:36377:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 36377 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomAngleForce_addAngle(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:36332:25: note: declared here 36332 | std::vector< double > v5 ; | ^~ In function 'PyObject* _wrap_CustomBondForce_setBondParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomBondForce_setBondParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:34017:69: src/swig_doxygen/OpenMMSwig.cxx:33892:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 33892 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomBondForce_setBondParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:33848:25: note: declared here 33848 | std::vector< double > v5 ; | ^~ In function 'PyObject* _wrap_CustomBondForce_addBond__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomBondForce_addBond(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:33748:57: src/swig_doxygen/OpenMMSwig.cxx:33641:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 33641 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomBondForce_addBond(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:33601:25: note: declared here 33601 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_new_Discrete1DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Discrete1DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:38227:50: src/swig_doxygen/OpenMMSwig.cxx:37993:35: warning: 'void operator delete(void*)' called on unallocated object 'v1' [-Wfree-nonheap-object] 37993 | if (SWIG_IsNewObj(res1)) delete arg1; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Discrete1DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:37968:25: note: declared here 37968 | std::vector< double > v1 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_MinimizationReporter_report(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:84985:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 84985 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:84918:25: note: declared here 84918 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:84986:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 84986 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:84920:25: note: declared here 84920 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:84989:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 84989 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:84918:25: note: declared here 84918 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:84989:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 84989 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:84918:25: note: declared here 84918 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_CustomCentroidBondForce_setBondParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomCentroidBondForce_setBondParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:71320:75: src/swig_doxygen/OpenMMSwig.cxx:71210:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 71210 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomCentroidBondForce_setBondParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:71164:25: note: declared here 71164 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_CustomCentroidBondForce_addBond__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomCentroidBondForce_addBond(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:71079:63: src/swig_doxygen/OpenMMSwig.cxx:70987:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 70987 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomCentroidBondForce_addBond(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:70945:25: note: declared here 70945 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_CustomCentroidBondForce_setGroupParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomCentroidBondForce_setGroupParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:70921:76: src/swig_doxygen/OpenMMSwig.cxx:70811:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 70811 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomCentroidBondForce_setGroupParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:70765:25: note: declared here 70765 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_CustomCentroidBondForce_addGroup__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomCentroidBondForce_addGroup(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:70680:64: src/swig_doxygen/OpenMMSwig.cxx:70588:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 70588 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomCentroidBondForce_addGroup(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:70546:25: note: declared here 70546 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_CustomCompoundBondForce_setBondParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomCompoundBondForce_setBondParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:48612:75: src/swig_doxygen/OpenMMSwig.cxx:48502:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 48502 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomCompoundBondForce_setBondParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:48456:25: note: declared here 48456 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_CustomCompoundBondForce_addBond__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomCompoundBondForce_addBond(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:48371:63: src/swig_doxygen/OpenMMSwig.cxx:48279:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 48279 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomCompoundBondForce_addBond(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:48237:25: note: declared here 48237 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_new_LocalCoordinatesSite__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_LocalCoordinatesSite(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:45543:60: src/swig_doxygen/OpenMMSwig.cxx:45192:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 45192 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_LocalCoordinatesSite(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:45124:25: note: declared here 45124 | std::vector< double > v2 ; | ^~ In function 'PyObject* _wrap_new_LocalCoordinatesSite__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_LocalCoordinatesSite(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:45543:60: src/swig_doxygen/OpenMMSwig.cxx:45193:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 45193 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_LocalCoordinatesSite(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:45126:25: note: declared here 45126 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_new_LocalCoordinatesSite__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_LocalCoordinatesSite(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:45543:60: src/swig_doxygen/OpenMMSwig.cxx:45194:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 45194 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_LocalCoordinatesSite(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:45128:25: note: declared here 45128 | std::vector< double > v4 ; | ^~ x86_64-linux-gnu-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,--as-needed -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" build/temp.linux-x86_64-cpython-312/src/swig_doxygen/OpenMMSwig.o -L/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,--enable-new-dtags,-R/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu -lOpenMM -lOpenMMAmoeba -lOpenMMRPMD -lOpenMMDrude -o /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/_openmm.cpython-312-x86_64-linux-gnu.so building 'openmm.app.internal.compiled' extension creating build/temp.linux-x86_64-cpython-312/openmm creating build/temp.linux-x86_64-cpython-312/openmm/app creating build/temp.linux-x86_64-cpython-312/openmm/app/internal x86_64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -fPIC -I/usr/include/python3.12 -c openmm/app/internal/compiled.cpp -o build/temp.linux-x86_64-cpython-312/openmm/app/internal/compiled.o cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ x86_64-linux-gnu-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,--as-needed -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" build/temp.linux-x86_64-cpython-312/openmm/app/internal/compiled.o -L/usr/lib/x86_64-linux-gnu -o /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/compiled.cpython-312-x86_64-linux-gnu.so building 'openmm.app.internal.xtc_utils' extension creating build/temp.linux-x86_64-cpython-312/openmm/app/internal/xtc_utils creating build/temp.linux-x86_64-cpython-312/openmm/app/internal/xtc_utils/src x86_64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -fPIC -Iopenmm/app/internal/xtc_utils -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include -I/usr/lib/python3/dist-packages/numpy/core/include -Iopenmm/app/internal/xtc_utils/include -Iopenmm/app/internal/xtc_utils/ -I/usr/include/python3.12 -c openmm/app/internal/xtc_utils/src/xdrfile.cpp -o build/temp.linux-x86_64-cpython-312/openmm/app/internal/xtc_utils/src/xdrfile.o cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ openmm/app/internal/xtc_utils/src/xdrfile.cpp: In function 'int sizeofint(int)': openmm/app/internal/xtc_utils/src/xdrfile.cpp:454:17: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 454 | while (size >= num && num_of_bits < 32) | ~~~~~^~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp: In function 'int sizeofints(int, unsigned int*)': openmm/app/internal/xtc_utils/src/xdrfile.cpp:500:32: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 500 | while (bytes[num_of_bytes] >= num) | ~~~~~~~~~~~~~~~~~~~~^~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp: In function 'void encodeints(int*, int, int, unsigned int*, unsigned int*)': openmm/app/internal/xtc_utils/src/xdrfile.cpp:609:21: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 609 | if (num_of_bits >= num_of_bytes * 8) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:611:31: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 611 | for (i = 0; i < num_of_bytes; i++) | ~~^~~~~~~~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:619:31: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 619 | for (i = 0; i < num_of_bytes-1; i++) | ~~^~~~~~~~~~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp: In function 'int decodebits(int*, int)': openmm/app/internal/xtc_utils/src/xdrfile.cpp:659:30: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 659 | if (lastbits < num_of_bits) | ~~~~~~~~~^~~~~~~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp: In function 'int xdrfile_decompress_coord_float(float*, int*, float*, XDRFILE*)': openmm/app/internal/xtc_utils/src/xdrfile.cpp:780:17: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 780 | if(size3>xfp->buf1size) | ~~~~~^~~~~~~~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:837:26: warning: comparison of integer expressions of different signedness: 'long unsigned int' and 'int' [-Wsign-compare] 837 | maxidx = (LASTIDX= size3 ) { return -1; } | ~~~~~~~~~^~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:930:45: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 930 | if(countmjh >= size3 ) { return -1; } | ~~~~~~~~~^~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:933:45: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 933 | if(countmjh >= size3 ) { return -1; } | ~~~~~~~~~^~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:940:45: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 940 | if(countmjh >= size3 ) { return -1; } | ~~~~~~~~~^~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:943:45: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 943 | if(countmjh >= size3 ) { return -1; } | ~~~~~~~~~^~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:946:45: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 946 | if(countmjh >= size3 ) { return -1; } | ~~~~~~~~~^~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:751:24: warning: variable 'minidx' set but not used [-Wunused-but-set-variable] 751 | int smallidx, minidx, maxidx; | ^~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:754:32: warning: variable 'larger' set but not used [-Wunused-but-set-variable] 754 | int smallnum, smaller, larger, i, is_smaller, run; | ^~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:758:13: warning: unused variable 'errval' [-Wunused-variable] 758 | int errval=1; | ^~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp: In function 'int xdrfile_compress_coord_float(float*, int, float, XDRFILE*)': openmm/app/internal/xtc_utils/src/xdrfile.cpp:1006:17: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 1006 | if(size3>xfp->buf1size) | ~~~~~^~~~~~~~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:1063:41: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 1063 | countmjh++; if( countmjh> size3) { return -1; } | ~~~~~~~~^~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:1079:35: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 1079 | countmjh++; if( countmjh> size3) { return -1; } | ~~~~~~~~^~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:1093:35: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 1093 | countmjh++; if( countmjh> size3) { return -1; } | ~~~~~~~~^~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:1132:25: warning: comparison of integer expressions of different signedness: 'int' and 'long unsigned int' [-Wsign-compare] 1132 | while (smallidx < LASTIDX && magicints[smallidx] < mindiff) | ^ openmm/app/internal/xtc_utils/src/xdrfile.cpp:1138:26: warning: comparison of integer expressions of different signedness: 'long unsigned int' and 'int' [-Wsign-compare] 1138 | maxidx = (LASTIDXxfp->buf1size) | ~~~~~^~~~~~~~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:1372:26: warning: comparison of integer expressions of different signedness: 'long unsigned int' and 'int' [-Wsign-compare] 1372 | maxidx = (LASTIDXxfp->buf1size) { | ~~~~~^~~~~~~~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:1623:25: warning: comparison of integer expressions of different signedness: 'int' and 'long unsigned int' [-Wsign-compare] 1623 | while (smallidx < LASTIDX && magicints[smallidx] < mindiff) { | ^ openmm/app/internal/xtc_utils/src/xdrfile.cpp:1628:26: warning: comparison of integer expressions of different signedness: 'long unsigned int' and 'int' [-Wsign-compare] 1628 | maxidx = (LASTIDX, , ] license Python Software Foundation License (BSD-like) long_descriptionOpenMM is a toolkit for molecular simulation. It can be used either as a stand-alone application for running simulations, or as a library you call from your own code. It provides a combination of extreme flexibility (through custom forces and integrators), openness, and high performance (especially on recent GPUs) that make it truly unique among simulation codes. name OpenMM package_data{'openmm': [], 'openmm.app': ['data/*.xml', 'data/*.pdb', 'data/amber14/*.xml', 'data/charmm36/*.xml', 'data/implicit/*.xml'], 'openmm.app.internal': []} packages['simtk', 'simtk.unit', 'simtk.openmm', 'simtk.openmm.app', 'openmm', 'openmm.unit', 'openmm', 'openmm.app', 'openmm.app.internal', 'openmm.app.internal.charmm', 'openmm.app.internal.pdbx', 'openmm.app.internal.pdbx.reader', 'openmm.app.internal.pdbx.writer'] platforms ['Linux', 'Mac OS X', 'Windows'] url https://openmm.org version 8.1.1 running build running build_py creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/simtk copying simtk/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/simtk creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/simtk/unit copying simtk/unit/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/simtk/unit creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/simtk/openmm copying simtk/openmm/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/simtk/openmm creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/simtk/openmm/app copying simtk/openmm/app/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/simtk/openmm/app creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm copying openmm/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm copying openmm/amd.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm copying openmm/openmm.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm copying openmm/version.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm copying openmm/vec3.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm copying openmm/mtsintegrator.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm copying openmm/testInstallation.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit copying openmm/unit/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit copying openmm/unit/unit.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit copying openmm/unit/constants.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit copying openmm/unit/doctests.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit copying openmm/unit/unit_operators.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit copying openmm/unit/quantity.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit copying openmm/unit/standard_dimensions.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit copying openmm/unit/basedimension.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit copying openmm/unit/mymatrix.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit copying openmm/unit/unit_definitions.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit copying openmm/unit/unit_math.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit copying openmm/unit/prefix.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit copying openmm/unit/baseunit.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app copying openmm/app/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app copying openmm/app/xtcfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app copying openmm/app/statedatareporter.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app copying openmm/app/xtcreporter.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app copying openmm/app/topology.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app copying openmm/app/pdbfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app copying openmm/app/amberprmtopfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app copying openmm/app/metadynamics.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app copying openmm/app/charmmpsffile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app copying openmm/app/modeller.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app copying openmm/app/pdbreporter.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app copying openmm/app/element.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app copying openmm/app/simulatedtempering.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app copying openmm/app/desmonddmsfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app copying openmm/app/amberinpcrdfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app copying openmm/app/pdbxfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app copying openmm/app/charmmcrdfiles.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app copying openmm/app/dcdreporter.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app copying openmm/app/checkpointreporter.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app copying openmm/app/dcdfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app copying openmm/app/gromacsgrofile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app copying openmm/app/charmmparameterset.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app copying openmm/app/simulation.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app copying openmm/app/gromacstopfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app copying openmm/app/forcefield.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal copying openmm/app/internal/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal copying openmm/app/internal/singleton.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal copying openmm/app/internal/amber_file_parser.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal copying openmm/app/internal/pdbstructure.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal copying openmm/app/internal/unitcell.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal copying openmm/app/internal/customgbforces.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal copying openmm/app/internal/argtracker.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/charmm copying openmm/app/internal/charmm/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/charmm copying openmm/app/internal/charmm/_charmmfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/charmm copying openmm/app/internal/charmm/topologyobjects.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/charmm copying openmm/app/internal/charmm/exceptions.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/charmm creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx copying openmm/app/internal/pdbx/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx/reader copying openmm/app/internal/pdbx/reader/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx/reader copying openmm/app/internal/pdbx/reader/PdbxContainers.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx/reader copying openmm/app/internal/pdbx/reader/PdbxReader.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx/reader copying openmm/app/internal/pdbx/reader/PdbxParser.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx/reader copying openmm/app/internal/pdbx/reader/PdbxReaderTests.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx/reader copying openmm/app/internal/pdbx/reader/PdbxReadWriteTests.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx/reader creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx/writer copying openmm/app/internal/pdbx/writer/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx/writer copying openmm/app/internal/pdbx/writer/PdbxWriterTests.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx/writer copying openmm/app/internal/pdbx/writer/PdbxWriter.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx/writer creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/amber96_obc.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/absinth.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/amber96.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/tip4pfb.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/amber03_obc.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/amber99sbnmr.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/opc.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/charmm36.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/amoeba2013.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/glycam-hydrogens.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/tip5p.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/amber99Test.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/amoeba2009.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/amber99_obc.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/amberfb15.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/tip4pew.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/spce.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/pdbNames.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/iamoeba.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/swm4ndp.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/amber99sb.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/amber14-all.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/amber10.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/tip3pfb.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/residues.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/tip3p.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/charmm_polar_2013.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/amber99sbildn.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/opc3.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/hydrogens.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/amber10_obc.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/charmm_polar_2019.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/amoeba2018.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/amoeba2018_gk.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/amoeba2009_gk.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/amoeba2013_gk.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/amber03.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/DMPC.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/swm4ndp.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/tip5p.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/DPPC.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/POPE.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/POPC.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/tip3p.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/spce.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/DLPE.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/tip4pew.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/DOPC.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/test.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data copying openmm/app/data/DLPC.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14 copying openmm/app/data/amber14/lipid17.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14 copying openmm/app/data/amber14/tip4pfb.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14 copying openmm/app/data/amber14/protein.ff15ipq.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14 copying openmm/app/data/amber14/opc.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14 copying openmm/app/data/amber14/DNA.bsc1.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14 copying openmm/app/data/amber14/DNA.OL15.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14 copying openmm/app/data/amber14/tip4pew.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14 copying openmm/app/data/amber14/spce.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14 copying openmm/app/data/amber14/RNA.OL3.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14 copying openmm/app/data/amber14/tip3pfb.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14 copying openmm/app/data/amber14/tip3p.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14 copying openmm/app/data/amber14/opc3.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14 copying openmm/app/data/amber14/protein.ff14SB.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14 copying openmm/app/data/amber14/GLYCAM_06j-1.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14 creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/tip3p-pme-b.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/tip3p-pme-f.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/water.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/tip5p.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/tip4pew.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/spce.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/tip5pew.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/charmm36 copying openmm/app/data/charmm36/tip4p2005.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/charmm36 creating /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/implicit copying openmm/app/data/implicit/obc2.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/implicit copying openmm/app/data/implicit/gbn2.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/implicit copying openmm/app/data/implicit/gbn.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/implicit copying openmm/app/data/implicit/obc1.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/implicit copying openmm/app/data/implicit/hct.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/implicit running build_ext building 'openmm._openmm' extension creating build/temp.linux-x86_64-cpython-311 creating build/temp.linux-x86_64-cpython-311/src creating build/temp.linux-x86_64-cpython-311/src/swig_doxygen x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -fPIC -DMAJOR_VERSION=8 -DMINOR_VERSION=1 -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c src/swig_doxygen/OpenMMSwig.cxx -o build/temp.linux-x86_64-cpython-311/src/swig_doxygen/OpenMMSwig.o -std=c++11 cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5, from src/swig_doxygen/OpenMMSwig.cxx:7360: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ In file included from /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/OpenMM.h:53, from src/swig_doxygen/OpenMMSwig.cxx:7346: /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/GayBerneForce.h: In constructor 'OpenMM::GayBerneForce::ParticleInfo::ParticleInfo(double, double, int, int, double, double, double, double, double, double)': /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/GayBerneForce.h:286:19: warning: 'OpenMM::GayBerneForce::ParticleInfo::epsilon' will be initialized after [-Wreorder] 286 | double sigma, epsilon, sx, sy, sz, ex, ey, ez; | ^~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/GayBerneForce.h:285:9: warning: 'int OpenMM::GayBerneForce::ParticleInfo::xparticle' [-Wreorder] 285 | int xparticle, yparticle; | ^~~~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/GayBerneForce.h:291:5: warning: when initialized here [-Wreorder] 291 | ParticleInfo(double sigma, double epsilon, int xparticle, int yparticle, double sx, double sy, double sz, double ex, double ey, double ez) : | ^~~~~~~~~~~~ In file included from /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/OpenMM.h:65: /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/NonbondedForce.h: In constructor 'OpenMM::NonbondedForce::ParticleOffsetInfo::ParticleOffsetInfo(int, int, double, double, double)': /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/NonbondedForce.h:694:19: warning: 'OpenMM::NonbondedForce::ParticleOffsetInfo::parameter' will be initialized after [-Wreorder] 694 | int particle, parameter; | ^~~~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/NonbondedForce.h:694:9: warning: 'int OpenMM::NonbondedForce::ParticleOffsetInfo::particle' [-Wreorder] 694 | int particle, parameter; | ^~~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/NonbondedForce.h:700:5: warning: when initialized here [-Wreorder] 700 | ParticleOffsetInfo(int parameter, int particle, double chargeScale, double sigmaScale, double epsilonScale) : | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/NonbondedForce.h: In constructor 'OpenMM::NonbondedForce::ExceptionOffsetInfo::ExceptionOffsetInfo(int, int, double, double, double)': /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/NonbondedForce.h:711:20: warning: 'OpenMM::NonbondedForce::ExceptionOffsetInfo::parameter' will be initialized after [-Wreorder] 711 | int exception, parameter; | ^~~~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/NonbondedForce.h:711:9: warning: 'int OpenMM::NonbondedForce::ExceptionOffsetInfo::exception' [-Wreorder] 711 | int exception, parameter; | ^~~~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/NonbondedForce.h:717:5: warning: when initialized here [-Wreorder] 717 | ExceptionOffsetInfo(int parameter, int exception, double chargeProdScale, double sigmaScale, double epsilonScale) : | ^~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/OpenMMAmoeba.h:38, from src/swig_doxygen/OpenMMSwig.cxx:7347: /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/AmoebaVdwForce.h: In constructor 'OpenMM::AmoebaVdwForce::VdwInfo::VdwInfo(int, double, double, int, double, bool)': /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/AmoebaVdwForce.h:492:36: warning: 'OpenMM::AmoebaVdwForce::VdwInfo::epsilon' will be initialized after [-Wreorder] 492 | double reductionFactor, sigma, epsilon, cutoff; | ^~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/AmoebaVdwForce.h:491:22: warning: 'int OpenMM::AmoebaVdwForce::VdwInfo::typeIndex' [-Wreorder] 491 | int parentIndex, typeIndex; | ^~~~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/AmoebaVdwForce.h:501:5: warning: when initialized here [-Wreorder] 501 | VdwInfo(int parentIndex, double sigma, double epsilon, int typeIndex, double reductionFactor, bool isAlchemical) : | ^~~~~~~ In file included from /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/OpenMMAmoeba.h:40: /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/HippoNonbondedForce.h: In constructor 'OpenMM::HippoNonbondedForce::ParticleInfo::ParticleInfo(double, const std::vector >&, const std::vector >&, double, double, double, double, double, double, double, double, double, int, int, int, int)': /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/HippoNonbondedForce.h:407:33: warning: 'OpenMM::HippoNonbondedForce::ParticleInfo::quadrupole' will be initialized after [-Wreorder] 407 | std::vector dipole, quadrupole; | ^~~~~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/HippoNonbondedForce.h:406:20: warning: 'double OpenMM::HippoNonbondedForce::ParticleInfo::coreCharge' [-Wreorder] 406 | double charge, coreCharge, alpha, epsilon, damping, c6, pauliK, pauliQ, pauliAlpha, polarizability; | ^~~~~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/HippoNonbondedForce.h:414:5: warning: when initialized here [-Wreorder] 414 | ParticleInfo(double charge, const std::vector& dipole, const std::vector& quadrupole, double coreCharge, | ^~~~~~~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/HippoNonbondedForce.h:406:89: warning: 'OpenMM::HippoNonbondedForce::ParticleInfo::polarizability' will be initialized after [-Wreorder] 406 | double charge, coreCharge, alpha, epsilon, damping, c6, pauliK, pauliQ, pauliAlpha, polarizability; | ^~~~~~~~~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/HippoNonbondedForce.h:405:9: warning: 'int OpenMM::HippoNonbondedForce::ParticleInfo::axisType' [-Wreorder] 405 | int axisType, multipoleAtomZ, multipoleAtomX, multipoleAtomY; | ^~~~~~~~ /build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include/openmm/HippoNonbondedForce.h:414:5: warning: when initialized here [-Wreorder] 414 | ParticleInfo(double charge, const std::vector& dipole, const std::vector& quadrupole, double coreCharge, | ^~~~~~~~~~~~ In file included from /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/State.h:35, from /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/Integrator.h:35, from /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/BrownianIntegrator.h:35, from /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/OpenMM.h:36: /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/Vec3.h: At global scope: /build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include/openmm/Vec3.h:160:13: warning: 'OpenMM::Vec3 OpenMM::operator*(double, Vec3)' defined but not used [-Wunused-function] 160 | static Vec3 operator*(double lhs, Vec3 rhs) { | ^~~~~~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomHbondForce_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:100019:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 100019 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:99944:25: note: declared here 99944 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomHbondForce_addFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:99843:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 99843 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:99772:25: note: declared here 99772 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomManyParticleForce_setParticleParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:89502:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 89502 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:89460:25: note: declared here 89460 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:89505:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 89505 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:89460:25: note: declared here 89460 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_Discrete3DFunction_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:84222:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 84222 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:84177:25: note: declared here 84177 | std::vector< double > v5 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_Continuous2DFunction_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:72346:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 72346 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:72250:25: note: declared here 72250 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:72349:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 72349 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:72250:25: note: declared here 72250 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_AmoebaMultipoleForce_setExtrapolationCoefficients(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:69050:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 69050 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:69020:25: note: declared here 69020 | std::vector< double > v2 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_AmoebaMultipoleForce_setMultipoleParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:68685:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 68685 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:68559:25: note: declared here 68559 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:68686:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 68686 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:68561:25: note: declared here 68561 | std::vector< double > v5 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:68689:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 68689 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:68559:25: note: declared here 68559 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_AmoebaMultipoleForce_addMultipole(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:68389:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 68389 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:68267:25: note: declared here 68267 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:68390:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 68390 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:68269:25: note: declared here 68269 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:68393:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 68393 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:68267:25: note: declared here 68267 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:68393:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 68393 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:68267:25: note: declared here 68267 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:68393:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 68393 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:68267:25: note: declared here 68267 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:68393:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 68393 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:68267:25: note: declared here 68267 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_HippoNonbondedForce_setParticleParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:59937:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 59937 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:59727:25: note: declared here 59727 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:59938:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 59938 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:59729:25: note: declared here 59729 | std::vector< double > v5 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:59941:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 59941 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:59727:25: note: declared here 59727 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_HippoNonbondedForce_addParticle(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:59491:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 59491 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:59285:25: note: declared here 59285 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:59492:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 59492 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:59287:25: note: declared here 59287 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:59495:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 59495 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:59285:25: note: declared here 59285 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_HippoNonbondedForce_setExtrapolationCoefficients(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:58805:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 58805 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:58775:25: note: declared here 58775 | std::vector< double > v2 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_Continuous3DFunction_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:56849:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 56849 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:56720:25: note: declared here 56720 | std::vector< double > v5 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:56852:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 56852 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:56720:25: note: declared here 56720 | std::vector< double > v5 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_Discrete2DFunction_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:53338:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 53338 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:53298:25: note: declared here 53298 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomGBForce_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:53014:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 53014 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:52939:25: note: declared here 52939 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomGBForce_addFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:52838:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 52838 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:52767:25: note: declared here 52767 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomGBForce_setParticleParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:51830:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 51830 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:51795:25: note: declared here 51795 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_Continuous1DFunction_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:50379:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 50379 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:50321:25: note: declared here 50321 | std::vector< double > v2 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:50382:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 50382 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:50321:25: note: declared here 50321 | std::vector< double > v2 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomCompoundBondForce_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:49250:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 49250 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:49175:25: note: declared here 49175 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomCompoundBondForce_addFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:49074:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 49074 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:49003:25: note: declared here 49003 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomNonbondedForce_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:41531:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 41531 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:41456:25: note: declared here 41456 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomNonbondedForce_addFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:41355:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 41355 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:41284:25: note: declared here 41284 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomNonbondedForce_setParticleParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:40685:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 40685 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:40650:25: note: declared here 40650 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CMAPTorsionForce_setMapParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:38536:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 38536 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:38496:25: note: declared here 38496 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CMAPTorsionForce_addMap(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:38417:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 38417 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:38381:25: note: declared here 38381 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_Discrete1DFunction_setFunctionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:38079:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 38079 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:38049:25: note: declared here 38049 | std::vector< double > v2 ; | ^~ In function 'PyObject* _wrap_CustomTorsionForce_setTorsionParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomTorsionForce_setTorsionParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:104202:79: src/swig_doxygen/OpenMMSwig.cxx:104039:35: warning: 'void operator delete(void*)' called on unallocated object 'v7' [-Wfree-nonheap-object] 104039 | if (SWIG_IsNewObj(res7)) delete arg7; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomTorsionForce_setTorsionParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:103985:25: note: declared here 103985 | std::vector< double > v7 ; | ^~ In function 'PyObject* _wrap_CustomTorsionForce_addTorsion__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomTorsionForce_addTorsion(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:103857:67: src/swig_doxygen/OpenMMSwig.cxx:103712:35: warning: 'void operator delete(void*)' called on unallocated object 'v6' [-Wfree-nonheap-object] 103712 | if (SWIG_IsNewObj(res6)) delete arg6; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomTorsionForce_addTorsion(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:103662:25: note: declared here 103662 | std::vector< double > v6 ; | ^~ In function 'PyObject* _wrap_CustomHbondForce_setAcceptorParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomHbondForce_setAcceptorParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:99217:76: src/swig_doxygen/OpenMMSwig.cxx:99073:35: warning: 'void operator delete(void*)' called on unallocated object 'v6' [-Wfree-nonheap-object] 99073 | if (SWIG_IsNewObj(res6)) delete arg6; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomHbondForce_setAcceptorParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:99024:25: note: declared here 99024 | std::vector< double > v6 ; | ^~ In function 'PyObject* _wrap_CustomHbondForce_addAcceptor__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomHbondForce_addAcceptor(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:98910:64: src/swig_doxygen/OpenMMSwig.cxx:98784:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 98784 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomHbondForce_addAcceptor(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:98739:25: note: declared here 98739 | std::vector< double > v5 ; | ^~ In function 'PyObject* _wrap_CustomHbondForce_setDonorParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomHbondForce_setDonorParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:98706:73: src/swig_doxygen/OpenMMSwig.cxx:98562:35: warning: 'void operator delete(void*)' called on unallocated object 'v6' [-Wfree-nonheap-object] 98562 | if (SWIG_IsNewObj(res6)) delete arg6; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomHbondForce_setDonorParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:98513:25: note: declared here 98513 | std::vector< double > v6 ; | ^~ In function 'PyObject* _wrap_CustomHbondForce_addDonor__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomHbondForce_addDonor(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:98399:61: src/swig_doxygen/OpenMMSwig.cxx:98273:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 98273 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomHbondForce_addDonor(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:98228:25: note: declared here 98228 | std::vector< double > v5 ; | ^~ In function 'PyObject* _wrap_CustomManyParticleForce_addParticle__SWIG_1(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomManyParticleForce_addParticle(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:89353:65: src/swig_doxygen/OpenMMSwig.cxx:89284:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 89284 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomManyParticleForce_addParticle(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:89254:25: note: declared here 89254 | std::vector< double > v2 ; | ^~ In function 'PyObject* _wrap_CustomManyParticleForce_addParticle__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomManyParticleForce_addParticle(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:89375:67: src/swig_doxygen/OpenMMSwig.cxx:89240:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 89240 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomManyParticleForce_addParticle(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:89203:25: note: declared here 89203 | std::vector< double > v2 ; | ^~ In function 'PyObject* _wrap_CustomManyParticleForce_addParticle__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomManyParticleForce_addParticle(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:89375:67: src/swig_doxygen/OpenMMSwig.cxx:89243:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 89243 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomManyParticleForce_addParticle(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:89203:25: note: declared here 89203 | std::vector< double > v2 ; | ^~ In function 'PyObject* _wrap_new_Discrete3DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Discrete3DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:84385:56: src/swig_doxygen/OpenMMSwig.cxx:84082:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 84082 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Discrete3DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:84042:25: note: declared here 84042 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_new_Continuous2DFunction__SWIG_1(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous2DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:72536:64: src/swig_doxygen/OpenMMSwig.cxx:72124:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 72124 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous2DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:72033:25: note: declared here 72033 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_new_Continuous2DFunction__SWIG_1(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous2DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:72536:64: src/swig_doxygen/OpenMMSwig.cxx:72127:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 72127 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous2DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:72033:25: note: declared here 72033 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_new_Continuous2DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous2DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:72601:66: src/swig_doxygen/OpenMMSwig.cxx:72012:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 72012 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous2DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:71914:25: note: declared here 71914 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_new_Continuous2DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous2DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:72601:66: src/swig_doxygen/OpenMMSwig.cxx:72015:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 72015 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous2DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:71914:25: note: declared here 71914 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_new_Continuous3DFunction__SWIG_1(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous3DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:57060:70: src/swig_doxygen/OpenMMSwig.cxx:56559:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 56559 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous3DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:56435:25: note: declared here 56435 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_new_Continuous3DFunction__SWIG_1(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous3DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:57060:70: src/swig_doxygen/OpenMMSwig.cxx:56562:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 56562 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous3DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:56435:25: note: declared here 56435 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_new_Continuous3DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous3DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:57149:72: src/swig_doxygen/OpenMMSwig.cxx:56409:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 56409 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous3DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:56278:25: note: declared here 56278 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_new_Continuous3DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous3DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:57149:72: src/swig_doxygen/OpenMMSwig.cxx:56412:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 56412 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous3DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:56278:25: note: declared here 56278 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_CustomExternalForce_setParticleParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomExternalForce_setParticleParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:54524:75: src/swig_doxygen/OpenMMSwig.cxx:54418:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 54418 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomExternalForce_setParticleParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:54379:25: note: declared here 54379 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_CustomExternalForce_addParticle__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomExternalForce_addParticle(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:54293:63: src/swig_doxygen/OpenMMSwig.cxx:54205:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 54205 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomExternalForce_addParticle(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:54170:25: note: declared here 54170 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_new_Discrete2DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Discrete2DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:53496:54: src/swig_doxygen/OpenMMSwig.cxx:53216:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 53216 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Discrete2DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:53181:25: note: declared here 53181 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_CustomGBForce_addParticle__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomGBForce_addParticle(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:51723:55: src/swig_doxygen/OpenMMSwig.cxx:51654:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 51654 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomGBForce_addParticle(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:51624:25: note: declared here 51624 | std::vector< double > v2 ; | ^~ In function 'PyObject* _wrap_new_Continuous1DFunction__SWIG_1(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous1DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:50543:56: src/swig_doxygen/OpenMMSwig.cxx:50243:35: warning: 'void operator delete(void*)' called on unallocated object 'v1' [-Wfree-nonheap-object] 50243 | if (SWIG_IsNewObj(res1)) delete arg1; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous1DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:50190:25: note: declared here 50190 | std::vector< double > v1 ; | ^~ In function 'PyObject* _wrap_new_Continuous1DFunction__SWIG_1(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous1DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:50543:56: src/swig_doxygen/OpenMMSwig.cxx:50246:35: warning: 'void operator delete(void*)' called on unallocated object 'v1' [-Wfree-nonheap-object] 50246 | if (SWIG_IsNewObj(res1)) delete arg1; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous1DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:50190:25: note: declared here 50190 | std::vector< double > v1 ; | ^~ In function 'PyObject* _wrap_new_Continuous1DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous1DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:50578:58: src/swig_doxygen/OpenMMSwig.cxx:50177:35: warning: 'void operator delete(void*)' called on unallocated object 'v1' [-Wfree-nonheap-object] 50177 | if (SWIG_IsNewObj(res1)) delete arg1; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous1DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:50117:25: note: declared here 50117 | std::vector< double > v1 ; | ^~ In function 'PyObject* _wrap_new_Continuous1DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Continuous1DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:50578:58: src/swig_doxygen/OpenMMSwig.cxx:50180:35: warning: 'void operator delete(void*)' called on unallocated object 'v1' [-Wfree-nonheap-object] 50180 | if (SWIG_IsNewObj(res1)) delete arg1; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Continuous1DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:50117:25: note: declared here 50117 | std::vector< double > v1 ; | ^~ In function 'PyObject* _wrap_CustomNonbondedForce_addParticle__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomNonbondedForce_addParticle(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:40578:62: src/swig_doxygen/OpenMMSwig.cxx:40509:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 40509 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomNonbondedForce_addParticle(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:40479:25: note: declared here 40479 | std::vector< double > v2 ; | ^~ In function 'PyObject* _wrap_CustomAngleForce_setAngleParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomAngleForce_setAngleParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:36810:73: src/swig_doxygen/OpenMMSwig.cxx:36666:35: warning: 'void operator delete(void*)' called on unallocated object 'v6' [-Wfree-nonheap-object] 36666 | if (SWIG_IsNewObj(res6)) delete arg6; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomAngleForce_setAngleParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:36617:25: note: declared here 36617 | std::vector< double > v6 ; | ^~ In function 'PyObject* _wrap_CustomAngleForce_addAngle__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomAngleForce_addAngle(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:36503:61: src/swig_doxygen/OpenMMSwig.cxx:36377:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 36377 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomAngleForce_addAngle(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:36332:25: note: declared here 36332 | std::vector< double > v5 ; | ^~ In function 'PyObject* _wrap_CustomBondForce_setBondParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomBondForce_setBondParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:34017:69: src/swig_doxygen/OpenMMSwig.cxx:33892:35: warning: 'void operator delete(void*)' called on unallocated object 'v5' [-Wfree-nonheap-object] 33892 | if (SWIG_IsNewObj(res5)) delete arg5; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomBondForce_setBondParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:33848:25: note: declared here 33848 | std::vector< double > v5 ; | ^~ In function 'PyObject* _wrap_CustomBondForce_addBond__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomBondForce_addBond(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:33748:57: src/swig_doxygen/OpenMMSwig.cxx:33641:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 33641 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomBondForce_addBond(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:33601:25: note: declared here 33601 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_new_Discrete1DFunction__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_Discrete1DFunction(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:38227:50: src/swig_doxygen/OpenMMSwig.cxx:37993:35: warning: 'void operator delete(void*)' called on unallocated object 'v1' [-Wfree-nonheap-object] 37993 | if (SWIG_IsNewObj(res1)) delete arg1; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_Discrete1DFunction(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:37968:25: note: declared here 37968 | std::vector< double > v1 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_MinimizationReporter_report(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:84985:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 84985 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:84918:25: note: declared here 84918 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:84986:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 84986 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:84920:25: note: declared here 84920 | std::vector< double > v4 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:84989:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 84989 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:84918:25: note: declared here 84918 | std::vector< double > v3 ; | ^~ src/swig_doxygen/OpenMMSwig.cxx:84989:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 84989 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx:84918:25: note: declared here 84918 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_CustomCentroidBondForce_setBondParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomCentroidBondForce_setBondParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:71320:75: src/swig_doxygen/OpenMMSwig.cxx:71210:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 71210 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomCentroidBondForce_setBondParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:71164:25: note: declared here 71164 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_CustomCentroidBondForce_addBond__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomCentroidBondForce_addBond(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:71079:63: src/swig_doxygen/OpenMMSwig.cxx:70987:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 70987 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomCentroidBondForce_addBond(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:70945:25: note: declared here 70945 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_CustomCentroidBondForce_setGroupParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomCentroidBondForce_setGroupParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:70921:76: src/swig_doxygen/OpenMMSwig.cxx:70811:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 70811 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomCentroidBondForce_setGroupParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:70765:25: note: declared here 70765 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_CustomCentroidBondForce_addGroup__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomCentroidBondForce_addGroup(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:70680:64: src/swig_doxygen/OpenMMSwig.cxx:70588:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 70588 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomCentroidBondForce_addGroup(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:70546:25: note: declared here 70546 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_CustomCompoundBondForce_setBondParameters__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomCompoundBondForce_setBondParameters(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:48612:75: src/swig_doxygen/OpenMMSwig.cxx:48502:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 48502 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomCompoundBondForce_setBondParameters(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:48456:25: note: declared here 48456 | std::vector< double > v4 ; | ^~ In function 'PyObject* _wrap_CustomCompoundBondForce_addBond__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_CustomCompoundBondForce_addBond(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:48371:63: src/swig_doxygen/OpenMMSwig.cxx:48279:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 48279 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_CustomCompoundBondForce_addBond(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:48237:25: note: declared here 48237 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_new_LocalCoordinatesSite__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_LocalCoordinatesSite(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:45543:60: src/swig_doxygen/OpenMMSwig.cxx:45192:35: warning: 'void operator delete(void*)' called on unallocated object 'v2' [-Wfree-nonheap-object] 45192 | if (SWIG_IsNewObj(res2)) delete arg2; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_LocalCoordinatesSite(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:45124:25: note: declared here 45124 | std::vector< double > v2 ; | ^~ In function 'PyObject* _wrap_new_LocalCoordinatesSite__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_LocalCoordinatesSite(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:45543:60: src/swig_doxygen/OpenMMSwig.cxx:45193:35: warning: 'void operator delete(void*)' called on unallocated object 'v3' [-Wfree-nonheap-object] 45193 | if (SWIG_IsNewObj(res3)) delete arg3; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_LocalCoordinatesSite(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:45126:25: note: declared here 45126 | std::vector< double > v3 ; | ^~ In function 'PyObject* _wrap_new_LocalCoordinatesSite__SWIG_0(PyObject*, Py_ssize_t, PyObject**)', inlined from 'PyObject* _wrap_new_LocalCoordinatesSite(PyObject*, PyObject*)' at src/swig_doxygen/OpenMMSwig.cxx:45543:60: src/swig_doxygen/OpenMMSwig.cxx:45194:35: warning: 'void operator delete(void*)' called on unallocated object 'v4' [-Wfree-nonheap-object] 45194 | if (SWIG_IsNewObj(res4)) delete arg4; | ^~~~ src/swig_doxygen/OpenMMSwig.cxx: In function 'PyObject* _wrap_new_LocalCoordinatesSite(PyObject*, PyObject*)': src/swig_doxygen/OpenMMSwig.cxx:45128:25: note: declared here 45128 | std::vector< double > v4 ; | ^~ x86_64-linux-gnu-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--as-needed -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" build/temp.linux-x86_64-cpython-311/src/swig_doxygen/OpenMMSwig.o -L/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,--enable-new-dtags,-R/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu -lOpenMM -lOpenMMAmoeba -lOpenMMRPMD -lOpenMMDrude -o /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/_openmm.cpython-311-x86_64-linux-gnu.so building 'openmm.app.internal.compiled' extension creating build/temp.linux-x86_64-cpython-311/openmm creating build/temp.linux-x86_64-cpython-311/openmm/app creating build/temp.linux-x86_64-cpython-311/openmm/app/internal x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -fPIC -I/usr/include/python3.11 -c openmm/app/internal/compiled.cpp -o build/temp.linux-x86_64-cpython-311/openmm/app/internal/compiled.o cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ x86_64-linux-gnu-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,--as-needed -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" build/temp.linux-x86_64-cpython-311/openmm/app/internal/compiled.o -L/usr/lib/x86_64-linux-gnu -o /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/compiled.cpython-311-x86_64-linux-gnu.so building 'openmm.app.internal.xtc_utils' extension creating build/temp.linux-x86_64-cpython-311/openmm/app/internal/xtc_utils creating build/temp.linux-x86_64-cpython-311/openmm/app/internal/xtc_utils/src x86_64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/openmm-8.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wdate-time -D_FORTIFY_SOURCE=2 -DDEB_HOST_MULTIARCH=\"x86_64-linux-gnu\" -fPIC -Iopenmm/app/internal/xtc_utils -I/build/reproducible-path/openmm-8.1.1+dfsg/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/olla/include -I/build/reproducible-path/openmm-8.1.1+dfsg/serialization/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/amoeba/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/rpmd/openmmapi/include -I/build/reproducible-path/openmm-8.1.1+dfsg/plugins/drude/openmmapi/include -I/usr/lib/python3/dist-packages/numpy/core/include -Iopenmm/app/internal/xtc_utils/include -Iopenmm/app/internal/xtc_utils/ -I/usr/include/python3.11 -c openmm/app/internal/xtc_utils/src/xdrfile.cpp -o build/temp.linux-x86_64-cpython-311/openmm/app/internal/xtc_utils/src/xdrfile.o cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ openmm/app/internal/xtc_utils/src/xdrfile.cpp: In function 'int sizeofint(int)': openmm/app/internal/xtc_utils/src/xdrfile.cpp:454:17: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 454 | while (size >= num && num_of_bits < 32) | ~~~~~^~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp: In function 'int sizeofints(int, unsigned int*)': openmm/app/internal/xtc_utils/src/xdrfile.cpp:500:32: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 500 | while (bytes[num_of_bytes] >= num) | ~~~~~~~~~~~~~~~~~~~~^~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp: In function 'void encodeints(int*, int, int, unsigned int*, unsigned int*)': openmm/app/internal/xtc_utils/src/xdrfile.cpp:609:21: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 609 | if (num_of_bits >= num_of_bytes * 8) | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:611:31: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 611 | for (i = 0; i < num_of_bytes; i++) | ~~^~~~~~~~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:619:31: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 619 | for (i = 0; i < num_of_bytes-1; i++) | ~~^~~~~~~~~~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp: In function 'int decodebits(int*, int)': openmm/app/internal/xtc_utils/src/xdrfile.cpp:659:30: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 659 | if (lastbits < num_of_bits) | ~~~~~~~~~^~~~~~~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp: In function 'int xdrfile_decompress_coord_float(float*, int*, float*, XDRFILE*)': openmm/app/internal/xtc_utils/src/xdrfile.cpp:780:17: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 780 | if(size3>xfp->buf1size) | ~~~~~^~~~~~~~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:837:26: warning: comparison of integer expressions of different signedness: 'long unsigned int' and 'int' [-Wsign-compare] 837 | maxidx = (LASTIDX= size3 ) { return -1; } | ~~~~~~~~~^~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:930:45: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 930 | if(countmjh >= size3 ) { return -1; } | ~~~~~~~~~^~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:933:45: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 933 | if(countmjh >= size3 ) { return -1; } | ~~~~~~~~~^~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:940:45: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 940 | if(countmjh >= size3 ) { return -1; } | ~~~~~~~~~^~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:943:45: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 943 | if(countmjh >= size3 ) { return -1; } | ~~~~~~~~~^~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:946:45: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 946 | if(countmjh >= size3 ) { return -1; } | ~~~~~~~~~^~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:751:24: warning: variable 'minidx' set but not used [-Wunused-but-set-variable] 751 | int smallidx, minidx, maxidx; | ^~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:754:32: warning: variable 'larger' set but not used [-Wunused-but-set-variable] 754 | int smallnum, smaller, larger, i, is_smaller, run; | ^~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:758:13: warning: unused variable 'errval' [-Wunused-variable] 758 | int errval=1; | ^~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp: In function 'int xdrfile_compress_coord_float(float*, int, float, XDRFILE*)': openmm/app/internal/xtc_utils/src/xdrfile.cpp:1006:17: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 1006 | if(size3>xfp->buf1size) | ~~~~~^~~~~~~~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:1063:41: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 1063 | countmjh++; if( countmjh> size3) { return -1; } | ~~~~~~~~^~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:1079:35: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 1079 | countmjh++; if( countmjh> size3) { return -1; } | ~~~~~~~~^~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:1093:35: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 1093 | countmjh++; if( countmjh> size3) { return -1; } | ~~~~~~~~^~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:1132:25: warning: comparison of integer expressions of different signedness: 'int' and 'long unsigned int' [-Wsign-compare] 1132 | while (smallidx < LASTIDX && magicints[smallidx] < mindiff) | ^ openmm/app/internal/xtc_utils/src/xdrfile.cpp:1138:26: warning: comparison of integer expressions of different signedness: 'long unsigned int' and 'int' [-Wsign-compare] 1138 | maxidx = (LASTIDXxfp->buf1size) | ~~~~~^~~~~~~~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:1372:26: warning: comparison of integer expressions of different signedness: 'long unsigned int' and 'int' [-Wsign-compare] 1372 | maxidx = (LASTIDXxfp->buf1size) { | ~~~~~^~~~~~~~~~~~~~ openmm/app/internal/xtc_utils/src/xdrfile.cpp:1623:25: warning: comparison of integer expressions of different signedness: 'int' and 'long unsigned int' [-Wsign-compare] 1623 | while (smallidx < LASTIDX && magicints[smallidx] < mindiff) { | ^ openmm/app/internal/xtc_utils/src/xdrfile.cpp:1628:26: warning: comparison of integer expressions of different signedness: 'long unsigned int' and 'int' [-Wsign-compare] 1628 | maxidx = (LASTIDX tags get executed. ... ok test_LennardJonesGenerator (TestForceField.TestForceField.test_LennardJonesGenerator) Test the LennardJones generator ... ok test_MultipleFilesandForceTags (TestForceField.TestForceField.test_MultipleFilesandForceTags) Test that the order of listing of multiple ffxmls does not matter. ... ok test_NBFix (TestForceField.TestForceField.test_NBFix) Test using LennardJonesGenerator to implement NBFix terms. ... ok test_NonbondedMethod (TestForceField.TestForceField.test_NonbondedMethod) Test all six options for the nonbondedMethod parameter. ... ok test_Opc3Energy (TestForceField.TestForceField.test_Opc3Energy) ... ok test_OpcEnergy (TestForceField.TestForceField.test_OpcEnergy) ... ok test_PeriodicBoxVectors (TestForceField.TestForceField.test_PeriodicBoxVectors) Test setting the periodic box vectors. ... ok test_ProgrammaticForceField (TestForceField.TestForceField.test_ProgrammaticForceField) Test building a ForceField programmatically. ... ok test_RemoveCMMotion (TestForceField.TestForceField.test_RemoveCMMotion) Test both options (True and False) for the removeCMMotion parameter. ... ok test_ResidueAttributes (TestForceField.TestForceField.test_ResidueAttributes) Test a ForceField that gets per-particle parameters from residue attributes. ... ok test_ResidueOverriding (TestForceField.TestForceField.test_ResidueOverriding) Test residue overriding via override tag in the XML ... ok test_ResidueTemplateUserChoice (TestForceField.TestForceField.test_ResidueTemplateUserChoice) Test createSystem does not allow multiple matching templates, unless ... ok test_RigidWaterAndConstraints (TestForceField.TestForceField.test_RigidWaterAndConstraints) Test all eight options for the constraints and rigidWater parameters. ... ok test_ScalingFactorCombining (TestForceField.TestForceField.test_ScalingFactorCombining) Tests that FFs can be combined if their scaling factors are very close ... ok test_SwitchingDistance (TestForceField.TestForceField.test_SwitchingDistance) Test that the switchDistance parameter is processed correctly. ... ok test_UnusedArgs (TestForceField.TestForceField.test_UnusedArgs) Test that specifying an argument that is never used throws an exception. ... ok test_Wildcard (TestForceField.TestForceField.test_Wildcard) Test that PeriodicTorsionForces using wildcard ('') for atom types / classes in the ffxml are correctly registered ... ok test_flexibleConstraints (TestForceField.TestForceField.test_flexibleConstraints) Test the flexibleConstraints keyword ... ok test_generateTemplatesForUnmatchedResidues (TestForceField.TestForceField.test_generateTemplatesForUnmatchedResidues) Test generation of blank forcefield residue templates for unmatched residues. ... ok test_getMatchingTemplates (TestForceField.TestForceField.test_getMatchingTemplates) Test retrieval of list of templates that match residues in a topology. ... ok test_getUnmatchedResidues (TestForceField.TestForceField.test_getUnmatchedResidues) Test retrieval of list of residues for which no templates are available. ... ok test_residueMatcher (TestForceField.TestForceField.test_residueMatcher) Test using a custom template matcher to select templates. ... ok test_residueTemplateGenerator (TestForceField.TestForceField.test_residueTemplateGenerator) Test the ability to add residue template generators to parameterize unmatched residues. ... ok test1 (TestForceGroups.TestForceGroups.test1) ... ok test2 (TestForceGroups.TestForceGroups.test2) ... ok test3 (TestForceGroups.TestForceGroups.test3) ... ok test_CustomHbondGenerator (TestGenerators.TestGenerators.test_CustomHbondGenerator) Test the generator for CustomHbondForce. ... ok test_CustomHbondGenerator2 (TestGenerators.TestGenerators.test_CustomHbondGenerator2) Test the generator for CustomHbondForce with different parameters. ... ok test_Triclinic (TestGromacsGroFile.TestGromacsGroFile.test_Triclinic) Test parsing a file that describes a triclinic box. ... ok test_Cutoff (TestGromacsTopFile.TestGromacsTopFile.test_Cutoff) Test to make sure the nonbondedCutoff parameter is passed correctly. ... skipped 'GROMACS is not installed' test_EwaldErrorTolerance (TestGromacsTopFile.TestGromacsTopFile.test_EwaldErrorTolerance) Test to make sure the ewaldErrorTolerance parameter is passed correctly. ... skipped 'GROMACS is not installed' test_GROMOS (TestGromacsTopFile.TestGromacsTopFile.test_GROMOS) Test a system using the GROMOS 54a7 force field. ... skipped 'GROMACS is not installed' test_HydrogenMass (TestGromacsTopFile.TestGromacsTopFile.test_HydrogenMass) Test that altering the mass of hydrogens works correctly. ... skipped 'GROMACS is not installed' test_NonbondedMethod (TestGromacsTopFile.TestGromacsTopFile.test_NonbondedMethod) Test all six options for the nonbondedMethod parameter. ... skipped 'GROMACS is not installed' test_RemoveCMMotion (TestGromacsTopFile.TestGromacsTopFile.test_RemoveCMMotion) Test both options (True and False) for the removeCMMotion parameter. ... skipped 'GROMACS is not installed' test_RigidWaterAndConstraints (TestGromacsTopFile.TestGromacsTopFile.test_RigidWaterAndConstraints) Test all eight options for the constraints and rigidWater parameters. ... skipped 'GROMACS is not installed' test_SMOG (TestGromacsTopFile.TestGromacsTopFile.test_SMOG) Test to ensure that SMOG models can be run without problems ... skipped 'GROMACS is not installed' test_SwitchingFunction (TestGromacsTopFile.TestGromacsTopFile.test_SwitchingFunction) Test using a switching function. ... skipped 'GROMACS is not installed' test_VirtualParticle (TestGromacsTopFile.TestGromacsTopFile.test_VirtualParticle) Test virtual particle works correctly. ... skipped 'GROMACS is not installed' test_Vsite3 (TestGromacsTopFile.TestGromacsTopFile.test_Vsite3) Test a three particle virtual site. ... skipped 'GROMACS is not installed' test_ff99SBILDN (TestGromacsTopFile.TestGromacsTopFile.test_ff99SBILDN) Test Gromacs topology #define replacement as used in ff99SB-ILDN ... skipped 'GROMACS is not installed' test_ionic (TestGromacsTopFile.TestGromacsTopFile.test_ionic) Test simulating an ionic liquid ... skipped 'GROMACS is not installed' testBadGroups (TestIntegrators.TestIntegrators.testBadGroups) Test the MTS integrator with bad force group substeps. ... ok testDrudeNoseHooverIntegrator (TestIntegrators.TestIntegrators.testDrudeNoseHooverIntegrator) Test the DrudeNoseHooverIntegrator ... skipped 'Skipping test failing due to missing platforms' testMTSIntegratorConstraints (TestIntegrators.TestIntegrators.testMTSIntegratorConstraints) Test the MTS integrator energy conservation on a system of constrained particles with no inner force (just constraints) ... ok testMTSIntegratorExplicit (TestIntegrators.TestIntegrators.testMTSIntegratorExplicit) Test the MTS integrator on an explicit solvent system ... ok testMTSLangevinIntegrator (TestIntegrators.TestIntegrators.testMTSLangevinIntegrator) Test the MTSLangevinIntegrator on an explicit solvent system ... ok testMTSLangevinIntegratorFriction (TestIntegrators.TestIntegrators.testMTSLangevinIntegratorFriction) Test the MTSLangevinIntegrator on a force-free particle to ensure friction is properly accounted for (issue #3790) ... ok testNoseHooverIntegrator (TestIntegrators.TestIntegrators.testNoseHooverIntegrator) Test partial thermostating in the NoseHooverIntegrator (only API) ... ok testHarmonicOscillator (TestMetadynamics.TestMetadynamics.testHarmonicOscillator) Test running metadynamics on a harmonic oscillator. ... ok test_add (TestModeller.TestModeller.test_add) Test the add() method. ... ok test_addExtraParticles (TestModeller.TestModeller.test_addExtraParticles) Test addExtraParticles(). ... ok test_addHydrogensASH (TestModeller.TestModeller.test_addHydrogensASH) Test of addHydrogens() in which we force ASH to be a variant using the variants parameter. ... ok test_addHydrogensCYX (TestModeller.TestModeller.test_addHydrogensCYX) Test of addHydrogens() in which we force CYX to be a variant using the variants parameter. ... ok test_addHydrogensGLH (TestModeller.TestModeller.test_addHydrogensGLH) Test of addHydrogens() in which we force GLH to be a variant using the variants parameter. ... ok test_addHydrogensGlycam (TestModeller.TestModeller.test_addHydrogensGlycam) Test adding hydrogens for GLYCAM. ... ok test_addHydrogensLYN (TestModeller.TestModeller.test_addHydrogensLYN) Test of addHydrogens() in which we force LYN to be a variant using the variants parameter. ... ok test_addHydrogensPdb2 (TestModeller.TestModeller.test_addHydrogensPdb2) Test the addHydrogens() method on the T4-lysozyme-L99A pdb file. ... ok test_addHydrogensPdb3 (TestModeller.TestModeller.test_addHydrogensPdb3) Test the addHydrogens() method on the metallothionein pdb file. ... ok test_addHydrogensPdb3_keepPositions (TestModeller.TestModeller.test_addHydrogensPdb3_keepPositions) Test addHydrogens() does not change existing Hs positions ... ok test_addHydrogenspH11 (TestModeller.TestModeller.test_addHydrogenspH11) Test of addHydrogens() with pH=11. ... ok test_addHydrogenspH4 (TestModeller.TestModeller.test_addHydrogenspH4) Test of addHydrogens() with pH=4. ... ok test_addHydrogenspH9 (TestModeller.TestModeller.test_addHydrogenspH9) Test of addHydrogens() with pH=9. ... ok test_addMembrane (TestModeller.TestModeller.test_addMembrane) Test adding a membrane to a realistic system. ... skipped 'Skipping a test which takes too long' test_addSolventBoxShape (TestModeller.TestModeller.test_addSolventBoxShape) Test the addSolvent() method; test the different box shapes. ... ok test_addSolventIons (TestModeller.TestModeller.test_addSolventIons) Test the addSolvent() method with all possible choices for positive and negative ions. ... ok test_addSolventNegativeSolvent (TestModeller.TestModeller.test_addSolventNegativeSolvent) Test the addSolvent() method; test adding ions to a negatively charged solvent. ... ok test_addSolventNeutralSolvent (TestModeller.TestModeller.test_addSolventNeutralSolvent) Test the addSolvent() method; test adding ions to neutral solvent. ... ok test_addSolventPeriodicBox (TestModeller.TestModeller.test_addSolventPeriodicBox) Test the addSolvent() method; test that the five ways of passing in the periodic box all work. ... ok test_addSolventPositiveSolvent (TestModeller.TestModeller.test_addSolventPositiveSolvent) Test the addSolvent() method; test adding ions to a positively charged solvent. ... ok test_addSolventWaterModels (TestModeller.TestModeller.test_addSolventWaterModels) Test all addSolvent() method with all possible water models. ... ok test_addVirtualSites (TestModeller.TestModeller.test_addVirtualSites) Test adding extra particles defined by virtual sites. ... ok test_convertWater (TestModeller.TestModeller.test_convertWater) Test the convertWater() method. ... ok test_delete (TestModeller.TestModeller.test_delete) Test the delete() method. ... ok test_deleteWater (TestModeller.TestModeller.test_deleteWater) Test the deleteWater() method. ... ok test_multiSiteIon (TestModeller.TestModeller.test_multiSiteIon) Test adding extra particles whose positions are determined based on bonds. ... ok test_removeExtraHydrogens (TestModeller.TestModeller.test_removeExtraHydrogens) Test that addHydrogens() can remove hydrogens that shouldn't be there. ... ok test_CMAP (TestNumpyCompatibility.TestNumpyCompatibility.test_CMAP) ... ok test_int64 (TestNumpyCompatibility.TestNumpyCompatibility.test_int64) ... ok test_periodicBoxVectors (TestNumpyCompatibility.TestNumpyCompatibility.test_periodicBoxVectors) ... ok test_setPositions (TestNumpyCompatibility.TestNumpyCompatibility.test_setPositions) ... ok test_setPositions_units (TestNumpyCompatibility.TestNumpyCompatibility.test_setPositions_units) ... ok test_setVelocities (TestNumpyCompatibility.TestNumpyCompatibility.test_setVelocities) ... ok test_setVelocities_units (TestNumpyCompatibility.TestNumpyCompatibility.test_setVelocities_units) ... ok test_tabulatedFunction (TestNumpyCompatibility.TestNumpyCompatibility.test_tabulatedFunction) ... ok testNumpyAttributes (TestNumpyCompatibility.TestNumpyUnits.testNumpyAttributes) ... ok testAlaAlaAla (TestPatches.TestPatches.testAlaAlaAla) Test constructing a System that involves two patches. ... ok testApplyPatch (TestPatches.TestPatches.testApplyPatch) Test applying a patch to a template. ... ok testDisulfidePatch (TestPatches.TestPatches.testDisulfidePatch) ... ok testParseMultiresiduePatch (TestPatches.TestPatches.testParseMultiresiduePatch) Test parsing a tag that affects two residues. ... ok testParsePatch (TestPatches.TestPatches.testParsePatch) Test parsing a tag. ... ok test_AltLocs (TestPdbFile.TestPdbFile.test_AltLocs) Test reading a file that includes AltLocs ... ok test_BinaryStream (TestPdbFile.TestPdbFile.test_BinaryStream) Test reading a stream that was opened in binary mode. ... ok test_ExtraParticles (TestPdbFile.TestPdbFile.test_ExtraParticles) Test reading, and writing and re-reading of a file containing extra particle atoms. ... ok test_LargeFile (TestPdbFile.TestPdbFile.test_LargeFile) Write and read a file with more than 100,000 atoms ... ok test_Triclinic (TestPdbFile.TestPdbFile.test_Triclinic) Test parsing a file that describes a triclinic box. ... ok test_WriteFile (TestPdbFile.TestPdbFile.test_WriteFile) Write a file, read it back, and make sure it matches the original. ... ok testBondSubset (TestPdbReporter.TestPDBReporter.testBondSubset) Test that CONECT records are output correctly when using atomSubset ... ok testInvalidSubsets (TestPdbReporter.TestPDBReporter.testInvalidSubsets) Test that an exception is raised when the indices in atomSubset are invalid ... ok testSubset (TestPdbReporter.TestPDBReporter.testSubset) Test writing out a subset of atoms ... ok testWriteAll (TestPdbReporter.TestPDBReporter.testWriteAll) Test all atoms are written when atomSubset is not specified ... ok testBondSubset (TestPdbReporter.TestPDBxReporter.testBondSubset) Test that struct_conn records are output correctly when using atomSubset ... ok testInvalidSubsets (TestPdbReporter.TestPDBxReporter.testInvalidSubsets) Test that an exception is raised when the indices in atomSubset are invalid ... ok testSubset (TestPdbReporter.TestPDBxReporter.testSubset) Test writing out a subset of atoms ... ok testWriteAll (TestPdbReporter.TestPDBxReporter.testWriteAll) Test all atoms are written when atomSubset is not specified ... ok testBonds (TestPdbxFile.TestPdbxFile.testBonds) Test reading and writing a file that includes bonds. ... ok testInsertionCodes (TestPdbxFile.TestPdbxFile.testInsertionCodes) Test reading a file that uses insertion codes. ... ok testMultiChain (TestPdbxFile.TestPdbxFile.testMultiChain) Test reading and writing a file that includes multiple chains ... ok testReporterExplicit (TestPdbxFile.TestPdbxFile.testReporterExplicit) Tests the PDBxReporter with PBC ... ok testReporterImplicit (TestPdbxFile.TestPdbxFile.testReporterImplicit) Tests the PDBxReporter without PBC ... ok test_FormatConversion (TestPdbxFile.TestPdbxFile.test_FormatConversion) Test conversion from PDB to PDBx ... ok test_Triclinic (TestPdbxFile.TestPdbxFile.test_Triclinic) Test parsing a file that describes a triclinic box. ... ok testCopyForce (TestPickle.TestPickle.testCopyForce) Test copying a Python object whose class extends Force. ... ok testCopyIntegrator (TestPickle.TestPickle.testCopyIntegrator) Test copying a Python object whose class extends Integrator. ... ok test_deepcopy (TestPickle.TestPickle.test_deepcopy) Test that serialization/deserialization works (via deepcopy). ... ok testHarmonicOscillator (TestSimulatedTempering.TestSimulatedTempering.testHarmonicOscillator) Test running simulated tempering on a harmonic oscillator. ... ok testHarmonicOscillatorNPT (TestSimulatedTempering.TestSimulatedTempering.testHarmonicOscillatorNPT) Test running simulated tempering on a harmonic oscillator with a Monte Carlo barostat. ... ok testCheckpointing (TestSimulation.TestSimulation.testCheckpointing) Test that checkpointing works correctly. ... ok testLoadFromXML (TestSimulation.TestSimulation.testLoadFromXML) Test creating a Simulation from XML files ... ok testMinimizationReporter (TestSimulation.TestSimulation.testMinimizationReporter) Test invoking a reporter during minimization. ... ok testRunForClockTime (TestSimulation.TestSimulation.testRunForClockTime) Test the runForClockTime() method. ... ok testSaveState (TestSimulation.TestSimulation.testSaveState) Test that saving States works correctly. ... ok testStep (TestSimulation.TestSimulation.testStep) Test the step() method. ... ok testWrappedCoordinates (TestSimulation.TestSimulation.testWrappedCoordinates) Test generating reports with and without wrapped coordinates. ... ok testAppend (TestStateDataReporter.TestStateDataReporter.testAppend) Test appending to the StateDataReporter output. ... /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/tests/TestStateDataReporter.py:33: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmphjszzaij/templog.txt' mode='r' encoding='utf-8'> lines = open(filename).read().split('\n') ResourceWarning: Enable tracemalloc to get the object allocation traceback ok test_1 (TestSwigWrappers.TestSwigWrappers.test_1) ... ok test_bondtype_singleton (TestTopology.TestTopology.test_bondtype_singleton) Tests that the bond types are really singletons ... ok test_getters (TestTopology.TestTopology.test_getters) Test getters for number of atoms, residues, chains. ... ok test_residue_bonds (TestTopology.TestTopology.test_residue_bonds) Test retrieving bonds for a residue produces expected results. ... ok testComputePBCVectors (TestUnitCell.TestUnitCell.testComputePBCVectors) Tests computing periodic box vectors ... ok testReducePBCVectors (TestUnitCell.TestUnitCell.testReducePBCVectors) Checks that reducePeriodicBoxVectors properly reduces vectors ... ok testMultiplication (TestUnits.TestNumpyUnits.testMultiplication) Tests that units override numpy.ndarray multiplication ... ok testNumpyDeepCopy (TestUnits.TestNumpyUnits.testNumpyDeepCopy) Check that deepcopy on numpy array does not strip units ... ok testNumpyDivision (TestUnits.TestNumpyUnits.testNumpyDivision) Tests that division of numpy Quantities works correctly ... ok testNumpyFunctions (TestUnits.TestNumpyUnits.testNumpyFunctions) Tests various numpy attributes that they result in Quantities ... ok testNumpyIsString (TestUnits.TestNumpyUnits.testNumpyIsString) Tests the internal _is_string method with numpy Quantities ... ok testNumpyQuantity (TestUnits.TestNumpyUnits.testNumpyQuantity) Tests that numpy arrays can form Quantity values ... ok testAngleQuantities (TestUnits.TestUnits.testAngleQuantities) Tests angle measurements ... ok testBadQuantityComparisons (TestUnits.TestUnits.testBadQuantityComparisons) Checks that comparisons of incompatible units fails ... ok testBadQuantityConversions (TestUnits.TestUnits.testBadQuantityConversions) Tests that conversions to incompatible units fails ... ok testBadQuantityMaths (TestUnits.TestUnits.testBadQuantityMaths) Tests that Maths of incompatible units properly fails ... ok testBaseScaleMix (TestUnits.TestUnits.testBaseScaleMix) Test mixing of BaseUnit and ScaledUnit instances ... ok testBaseUnit (TestUnits.TestUnits.testBaseUnit) Tests the creation of a base unit furlong ... ok testCalorieConversion (TestUnits.TestUnits.testCalorieConversion) Tests unit conversion with calories to joules ... ok testChemistryProblems (TestUnits.TestUnits.testChemistryProblems) Tests some gen-chem applications with Quantity's ... ok testCollectionQuantities (TestUnits.TestUnits.testCollectionQuantities) Tests the use of collections as Quantity values ... ok testCollectionQuantityOperations (TestUnits.TestUnits.testCollectionQuantityOperations) Tests that Quantity collections behave correctly ... ok testComparisonOperators (TestUnits.TestUnits.testComparisonOperators) Tests unit comparison operators ... ok testCompositeUnits (TestUnits.TestUnits.testCompositeUnits) Tests the creation of a composite unit ... ok testConversionFactorTo (TestUnits.TestUnits.testConversionFactorTo) Tests the "conversion_factor_to" attribute of Units ... ok testCreateNewBaseUnit (TestUnits.TestUnits.testCreateNewBaseUnit) Tests creating a new base unit ... ok testCreateNewScaledUnit (TestUnits.TestUnits.testCreateNewScaledUnit) Tests creating a new ScaledUnit ... ok testCreateNewUnit (TestUnits.TestUnits.testCreateNewUnit) Tests creating a new Unit ... ok testDimensionless (TestUnits.TestUnits.testDimensionless) Tests the properties of unit.dimensionless ... ok testGetUnitAttributes (TestUnits.TestUnits.testGetUnitAttributes) Tests the unit attribute `getters' ... ok testIllegalQuantityOps (TestUnits.TestUnits.testIllegalQuantityOps) Test that illegal operations on Quantity objects fails ... ok testIsCompatible (TestUnits.TestUnits.testIsCompatible) Tests the is_compatible attribute of units ... ok testIsQuantity (TestUnits.TestUnits.testIsQuantity) Tests if is_quantity can detect Quantities vs. scalars and units ... ok testIsUnit (TestUnits.TestUnits.testIsUnit) Tests the unit.is_unit introspective function ... ok testMisc (TestUnits.TestUnits.testMisc) Miscellaneous tests for the unit package ... ok testMutableQuantityOperations (TestUnits.TestUnits.testMutableQuantityOperations) Tests that mutable Quantity objects do not get unexpectedly changed ... ok testPresetUnitSystems (TestUnits.TestUnits.testPresetUnitSystems) Tests some of the pre-set UnitSystem's ... ok testQuantityBadSqrt (TestUnits.TestUnits.testQuantityBadSqrt) Tests that taking sqrt of Quantities with incompatible units fails ... ok testQuantityCollectionMethods (TestUnits.TestUnits.testQuantityCollectionMethods) Tests some sequence methods on Quantity objects (no numpy) ... ok testQuantityComparisons (TestUnits.TestUnits.testQuantityComparisons) Tests binary comparison operators between Quantity ... ok testQuantityComplicatedMaths (TestUnits.TestUnits.testQuantityComplicatedMaths) Tests a complicated set of mathematical operations on a Quantity ... ok testQuantityFormat (TestUnits.TestUnits.testQuantityFormat) Tests the format method on Quantity instances ... ok testQuantityMaths (TestUnits.TestUnits.testQuantityMaths) Tests dimensional analysis & maths on and b/w Quantity objects ... ok testQuantitySqrt (TestUnits.TestUnits.testQuantitySqrt) Tests taking the square root of quantities ... ok testReduceUnit (TestUnits.TestUnits.testReduceUnit) Tests the reduce_unit functionality ... ok testScalarQuantityConstructor (TestUnits.TestUnits.testScalarQuantityConstructor) Tests creating a Quantity using the Quantity constructor ... ok testScalarQuantityMultiplyDivide (TestUnits.TestUnits.testScalarQuantityMultiplyDivide) Tests creating a scalar Quantity object by * or / by a Unit ... ok testScaledUnit (TestUnits.TestUnits.testScaledUnit) Tests ScaledUnit class with kilokelvins ... ok testString (TestUnits.TestUnits.testString) Tests unit handling with strings, which should be dimensionless ... ok testToBaseUnit (TestUnits.TestUnits.testToBaseUnit) Tests the "get_conversion_factor_to_base_units" method ... ok testTruthiness (TestUnits.TestUnits.testTruthiness) Tests the truthiness of units ... ok testUnaryOperators (TestUnits.TestUnits.testUnaryOperators) Tests unary operators on units ... ok testUnitBadSqrt (TestUnits.TestUnits.testUnitBadSqrt) Tests that illegal sqrt calls on incompatible units fails ... ok testUnitDivision (TestUnits.TestUnits.testUnitDivision) Tests the division of units and is_dimensionless ... ok testUnitMathModule (TestUnits.TestUnits.testUnitMathModule) Tests the unit_math functions on Quantity objects ... ok testUnitMathModuleBadInput (TestUnits.TestUnits.testUnitMathModuleBadInput) Tests that bad units to unit_math fails appropriately ... ok testUnitSqrt (TestUnits.TestUnits.testUnitSqrt) Tests taking the square root of units ... ok testUnitString (TestUnits.TestUnits.testUnitString) Test the Unit->str casting functionality ... ok testUnitSystem (TestUnits.TestUnits.testUnitSystem) Tests the creation of a UnitSystem and its behavior ... ok testValueInUnit (TestUnits.TestUnits.testValueInUnit) Tests the value_in_unit functionality for Quantity ... ok testNegation (TestVec3.TestVectors.testNegation) ... ok testVec3Addition (TestVec3.TestVectors.testVec3Addition) ... ok testVec3Attributes (TestVec3.TestVectors.testVec3Attributes) ... ok testVec3Division (TestVec3.TestVectors.testVec3Division) ... ok testVec3Equality (TestVec3.TestVectors.testVec3Equality) ... ok testVec3Multiplication (TestVec3.TestVectors.testVec3Multiplication) ... ok testVec3Subtraction (TestVec3.TestVectors.testVec3Subtraction) ... ok testAppend (TestXtcFile.TestXtcFile.testAppend) Test appending to an existing trajectory. ... ok testLongTrajectory (TestXtcFile.TestXtcFile.testLongTrajectory) Test writing a trajectory that has more than 2^31 steps. ... ok test_xtc_box_from_topology (TestXtcFile.TestXtcFile.test_xtc_box_from_topology) Test the XTC file by writing a trajectory and reading it back. Letting the box be set from the topology ... ok test_xtc_cubic (TestXtcFile.TestXtcFile.test_xtc_cubic) Test the XTC file by writing a trajectory and reading it back. Using a cubic box ... ok test_xtc_triclinic (TestXtcFile.TestXtcFile.test_xtc_triclinic) Test the XTC file by writing a trajectory and reading it back. Using a triclinic box ... ok ---------------------------------------------------------------------- Ran 327 tests in 1940.547s OK (skipped=21) #"Steps" "Temperature (K)" "200K Weight" "216.012K Weight" "233.306K Weight" "251.984K Weight" "272.158K Weight" "293.947K Weight" "317.48K Weight" "342.898K Weight" "370.35K Weight" "400K Weight" 10000 342.898 0 0.113281 -0.117188 -0.0234375 -0.132812 -0.1875 -0.15625 -0.113281 -0.195312 -0.40625 20000 317.48 0 0.109009 -0.083252 0.00909424 -0.130249 -0.160278 -0.148743 -0.12207 -0.172729 -0.363953 30000 272.158 0 0.109227 -0.0831275 0.00957012 -0.129939 -0.160205 -0.148535 -0.122037 -0.173086 -0.363909 40000 216.012 0 0.109224 -0.0831283 0.00956853 -0.129939 -0.160203 -0.148536 -0.122038 -0.173093 -0.363911 50000 370.35 0 0.109224 -0.0831283 0.00956847 -0.129939 -0.160203 -0.148536 -0.122038 -0.173093 -0.363911 60000 251.984 0 0.109224 -0.0831283 0.00956847 -0.129939 -0.160203 -0.148536 -0.122038 -0.173093 -0.363911 70000 272.158 0 0.109224 -0.0831283 0.00956847 -0.129939 -0.160203 -0.148536 -0.122038 -0.173093 -0.363911 80000 370.35 0 0.109224 -0.0831283 0.00956847 -0.129939 -0.160203 -0.148536 -0.122038 -0.173093 -0.363911 90000 233.306 0 0.109224 -0.0831283 0.00956847 -0.129939 -0.160203 -0.148536 -0.122038 -0.173093 -0.363911 100000 251.984 0 0.109224 -0.0831283 0.00956847 -0.129939 -0.160203 -0.148536 -0.122038 -0.173093 -0.363911 110000 251.984 0 0.109224 -0.0831283 0.00956847 -0.129939 -0.160203 -0.148536 -0.122038 -0.173093 -0.363911 #"Steps" "Temperature (K)" "200K Weight" "216.012K Weight" "233.306K Weight" "251.984K Weight" "272.158K Weight" "293.947K Weight" "317.48K Weight" "342.898K Weight" "370.35K Weight" "400K Weight" I: pybuild pybuild:308: cp -r /build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu/python/tests/systems /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build I: pybuild base:311: cd /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build; python3.11 -m unittest discover -v --start-directory tests -p 'Test*' testATMForce (TestAPIUnits.TestAPIUnits.testATMForce) Tests the ATMForce API features ... ok testAmoebaMultipoleForce (TestAPIUnits.TestAPIUnits.testAmoebaMultipoleForce) Tests the AmoebaMultipoleForce API features ... ok testAmoebaTorsionTorsionForce (TestAPIUnits.TestAPIUnits.testAmoebaTorsionTorsionForce) Tests the AmoebaTorsionTorsionForce API features ... ok testAmoebaVdwForce (TestAPIUnits.TestAPIUnits.testAmoebaVdwForce) Tests the AmoebaVdwForce API features ... ok testAmoebaWcaDispersionForce (TestAPIUnits.TestAPIUnits.testAmoebaWcaDispersionForce) Tests the AmoebaWcaDispersionForce API features ... ok testAndersenThermostat (TestAPIUnits.TestAPIUnits.testAndersenThermostat) Tests the AndersenThermostat API features ... ok testBrownianIntegrator (TestAPIUnits.TestAPIUnits.testBrownianIntegrator) Tests the BrownianIntegrator API features ... ok testCmapForce (TestAPIUnits.TestAPIUnits.testCmapForce) Tests the CMAPTorsionForce API features ... ok testCustomAngleForce (TestAPIUnits.TestAPIUnits.testCustomAngleForce) Tests the CustomAngleForce API features ... ok testCustomBondForce (TestAPIUnits.TestAPIUnits.testCustomBondForce) Tests the CustomBondForce API features ... ok testCustomCompoundBondForce (TestAPIUnits.TestAPIUnits.testCustomCompoundBondForce) Tests the CustomCompoundBondForce API features ... ok testCustomExternalForce (TestAPIUnits.TestAPIUnits.testCustomExternalForce) Tests the CustomExternalForce API features ... ok testCustomGBForce (TestAPIUnits.TestAPIUnits.testCustomGBForce) Tests the CustomGBForce API features ... ok testCustomHBondForce (TestAPIUnits.TestAPIUnits.testCustomHBondForce) Tests the CustomHbondForce API features ... ok testCustomIntegrator (TestAPIUnits.TestAPIUnits.testCustomIntegrator) Tests the CustomIntegrator API features ... ok testCustomManyParticleForce (TestAPIUnits.TestAPIUnits.testCustomManyParticleForce) Tests the CustomManyParticleForce API features ... ok testCustomNonbondedForce (TestAPIUnits.TestAPIUnits.testCustomNonbondedForce) Tests the CustomNonbondedForce API features ... ok testCustomTorsionForce (TestAPIUnits.TestAPIUnits.testCustomTorsionForce) Tests the CustomTorsionForce API features ... ok testDrudeForce (TestAPIUnits.TestAPIUnits.testDrudeForce) Tests the DrudeForce API features ... ok testDrudeLangevinIntegrator (TestAPIUnits.TestAPIUnits.testDrudeLangevinIntegrator) Tests the DrudeLangevinIntegrator API features ... ok testDrudeNoseHooverIntegrator (TestAPIUnits.TestAPIUnits.testDrudeNoseHooverIntegrator) Tests the DrudeNoseHooverIntegrator API features ... ok testDrudeSCFIntegrator (TestAPIUnits.TestAPIUnits.testDrudeSCFIntegrator) Tests the DrudeSCFIntegrator API features ... ok testGeneralizedKirkwood (TestAPIUnits.TestAPIUnits.testGeneralizedKirkwood) Tests the AmoebaGeneralizedKirkwoodForce API features ... ok testHarmonicAngleForce (TestAPIUnits.TestAPIUnits.testHarmonicAngleForce) Tests HarmonicAngleForce API features ... ok testHarmonicBondForce (TestAPIUnits.TestAPIUnits.testHarmonicBondForce) Tests HarmonicBondForce API features ... ok testLangevinIntegrator (TestAPIUnits.TestAPIUnits.testLangevinIntegrator) Tests the LangevinIntegrator API features ... ok testMonteCarloMembraneBarostat (TestAPIUnits.TestAPIUnits.testMonteCarloMembraneBarostat) Tests the MonteCarloMembraneBarostat API features ... ok testNonbondedForce (TestAPIUnits.TestAPIUnits.testNonbondedForce) Tests the NonbondedForce API features ... ok testNoseHooverIntegrator (TestAPIUnits.TestAPIUnits.testNoseHooverIntegrator) Tests the NoseHooverIntegrator API features ... ok testPeriodicTorsionForce (TestAPIUnits.TestAPIUnits.testPeriodicTorsionForce) Tests PeriodicTorsionForce API features ... ok testRBTorsionForce (TestAPIUnits.TestAPIUnits.testRBTorsionForce) Tests the RBTorsionForce API features ... ok testVariableLangevinIntegrator (TestAPIUnits.TestAPIUnits.testVariableLangevinIntegrator) Tests the VariableLangevinIntegrator API features ... ok testVariableVerletIntegrator (TestAPIUnits.TestAPIUnits.testVariableVerletIntegrator) Tests the VariableVerletIntegrator API features ... ok testVerletIntegrator (TestAPIUnits.TestAPIUnits.testVerletIntegrator) Tests the VerletIntegrator API features ... ok test2ParticlesNonbonded (TestATMForce.TestATMForce.test2ParticlesNonbonded) Test for a Nonbonded force previously added to the System ... ok test_CrdBox (TestAmberInpcrdFile.TestAmberInpcrdFile.test_CrdBox) Test parsing ASCII restarts with only crds and box ... /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/amber_file_parser.py:1447: DeprecationWarning: `scipy.io.netcdf.NetCDFFile` is deprecated along with the `scipy.io.netcdf` namespace. `scipy.io.netcdf.NetCDFFile` will be removed in SciPy 1.14.0, and the `scipy.io.netcdf` namespace will be removed in SciPy 2.0.0. from scipy.io.netcdf import NetCDFFile ok test_CrdBoxTruncoct (TestAmberInpcrdFile.TestAmberInpcrdFile.test_CrdBoxTruncoct) ... ok test_CrdOnly (TestAmberInpcrdFile.TestAmberInpcrdFile.test_CrdOnly) ... ok test_CrdVel (TestAmberInpcrdFile.TestAmberInpcrdFile.test_CrdVel) ... ok test_CrdVelBox (TestAmberInpcrdFile.TestAmberInpcrdFile.test_CrdVelBox) Test parsing ASCII restarts with crds, vels, and box ... ok test_NetCDF (TestAmberInpcrdFile.TestAmberInpcrdFile.test_NetCDF) Test NetCDF restart file parsing ... ok testAmberCMAP (TestAmberPrmtopFile.TestAmberPrmtopFile.testAmberCMAP) Check that CMAP energy calcultion compared to AMber. ... ok testChamber (TestAmberPrmtopFile.TestAmberPrmtopFile.testChamber) Test a prmtop file created with Chamber. ... ok testEPConstraints (TestAmberPrmtopFile.TestAmberPrmtopFile.testEPConstraints) Test different types of constraints when using extra particles ... ok testGBneckRadii (TestAmberPrmtopFile.TestAmberPrmtopFile.testGBneckRadii) Tests that GBneck radii limits are correctly enforced ... ok testNucleicGBParametes (TestAmberPrmtopFile.TestAmberPrmtopFile.testNucleicGBParametes) Test that correct GB parameters are used for nucleic acids. ... /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/amber_file_parser.py:1168: UserWarning: Non-optimal GB parameters detected for GB model GBn warnings.warn( ok testSwitchFunction (TestAmberPrmtopFile.TestAmberPrmtopFile.testSwitchFunction) Tests the switching function option in AmberPrmtopFile ... ok testWaterBonds (TestAmberPrmtopFile.TestAmberPrmtopFile.testWaterBonds) Test that water molecules have the right set of bonds ... ok test_Cutoff (TestAmberPrmtopFile.TestAmberPrmtopFile.test_Cutoff) Test to make sure the nonbondedCutoff parameter is passed correctly. ... ok test_EwaldErrorTolerance (TestAmberPrmtopFile.TestAmberPrmtopFile.test_EwaldErrorTolerance) Test to make sure the ewaldErrorTolerance parameter is passed correctly. ... ok test_HAngle (TestAmberPrmtopFile.TestAmberPrmtopFile.test_HAngle) Test that HAngle constraints are properly handled for all hydrogens ... ok test_HydrogenMass (TestAmberPrmtopFile.TestAmberPrmtopFile.test_HydrogenMass) Test that altering the mass of hydrogens works correctly. ... ok test_ImplicitSolvent (TestAmberPrmtopFile.TestAmberPrmtopFile.test_ImplicitSolvent) Test the four types of implicit solvents using the implicitSolvent ... /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/amber_file_parser.py:1168: UserWarning: Non-optimal GB parameters detected for GB model HCT warnings.warn( ok test_ImplicitSolventForces (TestAmberPrmtopFile.TestAmberPrmtopFile.test_ImplicitSolventForces) Compute forces for different implicit solvent types, and compare them to ones generated with a previous version of OpenMM to ensure they haven't changed. ... ok test_ImplicitSolventParameters (TestAmberPrmtopFile.TestAmberPrmtopFile.test_ImplicitSolventParameters) Test that parameters are set correctly for the different types of implicit solvent. ... ok test_ImplicitSolventZeroSA (TestAmberPrmtopFile.TestAmberPrmtopFile.test_ImplicitSolventZeroSA) Test that requesting gbsaModel=None yields a surface area energy of 0 when ... ok test_LJ1264 (TestAmberPrmtopFile.TestAmberPrmtopFile.test_LJ1264) Test prmtop with 12-6-4 vdW potential implemented ... ok test_NBFIX_LongRange (TestAmberPrmtopFile.TestAmberPrmtopFile.test_NBFIX_LongRange) Test prmtop files with NBFIX LJ modifications w/ long-range correction ... ok test_NBFIX_noLongRange (TestAmberPrmtopFile.TestAmberPrmtopFile.test_NBFIX_noLongRange) Test prmtop files with NBFIX LJ modifications w/out long-range correction ... ok test_NonbondedMethod (TestAmberPrmtopFile.TestAmberPrmtopFile.test_NonbondedMethod) Test all six options for the nonbondedMethod parameter. ... ok test_RemoveCMMotion (TestAmberPrmtopFile.TestAmberPrmtopFile.test_RemoveCMMotion) Test both options (True and False) for the removeCMMotion parameter. ... ok test_RigidWaterAndConstraints (TestAmberPrmtopFile.TestAmberPrmtopFile.test_RigidWaterAndConstraints) Test all eight options for the constraints and rigidWater parameters. ... ok test_triclinicParm (TestAmberPrmtopFile.TestAmberPrmtopFile.test_triclinicParm) Check that triclinic unit cells work correctly ... ok test_with_dcd_reporter (TestAmberPrmtopFile.TestAmberPrmtopFile.test_with_dcd_reporter) Check that an amber simulation like the docs example works with a DCD reporter. ... ok test_createCheckpoint (TestBytes.TestBytes.test_createCheckpoint) ... ok testSystemOptions (TestCharmmFiles.TestCharmmFiles.testSystemOptions) Test various options in CharmmPsfFile.createSystem ... ok test_Constraints (TestCharmmFiles.TestCharmmFiles.test_Constraints) Test that bond and angles constraints are correctly added into the system ... ok test_Constraints_charmm (TestCharmmFiles.TestCharmmFiles.test_Constraints_charmm) Tests that CHARMM and OpenMM implementation of CHARMM force field produce the same constraints and energy ... ok test_Cutoff (TestCharmmFiles.TestCharmmFiles.test_Cutoff) Test to make sure the nonbondedCutoff parameter is passed correctly. ... ok test_Drude (TestCharmmFiles.TestCharmmFiles.test_Drude) Test CHARMM systems with Drude force field ... skipped 'Skipping test failing due to missing platforms' test_DrudeMass (TestCharmmFiles.TestCharmmFiles.test_DrudeMass) Test that setting the mass of Drude particles works correctly. ... ok test_HydrogenMass (TestCharmmFiles.TestCharmmFiles.test_HydrogenMass) Test that altering the mass of hydrogens works correctly. ... ok test_ImplicitSolvent (TestCharmmFiles.TestCharmmFiles.test_ImplicitSolvent) Test implicit solvent using the implicitSolvent parameter. ... ok test_ImplicitSolventForces (TestCharmmFiles.TestCharmmFiles.test_ImplicitSolventForces) Compute forces for different implicit solvent types, and compare them to ones generated with a previous version of OpenMM to ensure they haven't changed. ... ok test_ImplicitSolventParameters (TestCharmmFiles.TestCharmmFiles.test_ImplicitSolventParameters) Test that solventDielectric and soluteDielectric are passed correctly. ... ok test_Impropers (TestCharmmFiles.TestCharmmFiles.test_Impropers) Test CHARMM improper torsions. ... ok test_InsCode (TestCharmmFiles.TestCharmmFiles.test_InsCode) Test the parsing of PSF files that contain insertion codes in their residue numbers ... ok test_Lonepair (TestCharmmFiles.TestCharmmFiles.test_Lonepair) Test the lonepair facilities, in particular the colinear type of lonepairs ... ok test_NBFIX (TestCharmmFiles.TestCharmmFiles.test_NBFIX) Tests CHARMM systems with NBFIX Lennard-Jones modifications ... ok test_NBFIX14 (TestCharmmFiles.TestCharmmFiles.test_NBFIX14) Tests CHARMM systems with NBFIX modifications to 1-4 interactions ... ok test_NBThole (TestCharmmFiles.TestCharmmFiles.test_NBThole) Tests CHARMM system with NBTHole ... skipped 'Skipping test failing due to missing platforms' test_NBXMod (TestCharmmFiles.TestCharmmFiles.test_NBXMod) Test that all values of NBXMod are interpreted correctly. ... ok test_NoLongRangeCorrection (TestCharmmFiles.TestCharmmFiles.test_NoLongRangeCorrection) Test that long range correction is disabled. ... ok test_NoPsfWarning (TestCharmmFiles.TestCharmmFiles.test_NoPsfWarning) Test that PSF warning is not thrown. ... ok test_NonbondedMethod (TestCharmmFiles.TestCharmmFiles.test_NonbondedMethod) Test both non-periodic methods for the systems ... ok test_Nonbonded_Exclusion (TestCharmmFiles.TestCharmmFiles.test_Nonbonded_Exclusion) Test that the 1-2, 1-3 and 1-4 pairs are correctly excluded or scaled. ... ok test_PSFSetUnitCellDimensions (TestCharmmFiles.TestCharmmFiles.test_PSFSetUnitCellDimensions) Test that setting the box via unit cell dimensions works correctly. ... ok test_PermissiveRead (TestCharmmFiles.TestCharmmFiles.test_PermissiveRead) Compare permissive and strict reading of Charmm parameters ... ok test_RemoveCMMotion (TestCharmmFiles.TestCharmmFiles.test_RemoveCMMotion) Test both options (True and False) for the removeCMMotion parameter. ... ok test_Residues (TestCharmmFiles.TestCharmmFiles.test_Residues) Test that residues are read correctly, even if they have the same RESID while being in separate segments. ... ok test_1 (TestCheckpointReporter.TestCheckpointReporter.test_1) Test CheckpointReporter. ... ok testAppend (TestDcdFile.TestDCDFile.testAppend) Test appending to an existing trajectory. ... ok testLongTrajectory (TestDcdFile.TestDCDFile.testLongTrajectory) Test writing a trajectory that has more than 2^31 steps. ... ok test_dcd (TestDcdFile.TestDCDFile.test_dcd) Test the DCD file ... ok test_Cutoff (TestDesmondDMSFile.TestDesmondDMSFile.test_Cutoff) Test to make sure the nonbondedCutoff parameter is passed correctly. ... ok test_EwaldErrorTolerance (TestDesmondDMSFile.TestDesmondDMSFile.test_EwaldErrorTolerance) Test to make sure the ewaldErrorTolerance parameter is passed correctly. ... ok test_HydrogenMass (TestDesmondDMSFile.TestDesmondDMSFile.test_HydrogenMass) Test that altering the mass of hydrogens works correctly. ... ok test_NonbondedMethod (TestDesmondDMSFile.TestDesmondDMSFile.test_NonbondedMethod) Test all six options for the nonbondedMethod parameter. ... ok test_OPLS1 (TestDesmondDMSFile.TestDesmondDMSFile.test_OPLS1) Test OPLS potential energy of nabumetone ... ok test_OPLS2 (TestDesmondDMSFile.TestDesmondDMSFile.test_OPLS2) Test OPLS potential energy of beta-cyclodextrin/nabumetone complex ... ok test_RemoveCMMotion (TestDesmondDMSFile.TestDesmondDMSFile.test_RemoveCMMotion) Test both options (True and False) for the removeCMMotion parameter. ... ok test_attributes (TestElement.TestElement.test_attributes) ... ok test_getByMass (TestElement.TestElement.test_getByMass) Tests the getByMass method ... ok test_immutable (TestElement.TestElement.test_immutable) ... ok test_pickleable (TestElement.TestElement.test_pickleable) ... ok test_Amoeba18BPTI (TestForceField.AmoebaTestForceField.test_Amoeba18BPTI) Test that AMOEBA18 computes energies correctly for BPTI. ... skipped 'Skipping test failing due to missing platforms' test_Amoeba18Nucleic (TestForceField.AmoebaTestForceField.test_Amoeba18Nucleic) Test that AMOEBA18 computes energies correctly for DNA and RNA. ... skipped 'Skipping test failing due to missing platforms' test_Cutoff (TestForceField.AmoebaTestForceField.test_Cutoff) Test to make sure the nonbondedCutoff parameter is passed correctly. ... ok test_DispersionCorrection (TestForceField.AmoebaTestForceField.test_DispersionCorrection) Test to make sure the nonbondedCutoff parameter is passed correctly. ... ok test_Forces (TestForceField.AmoebaTestForceField.test_Forces) Compute forces and compare them to ones generated with a previous version of OpenMM to ensure they haven't changed. ... skipped 'Skipping test failing due to missing platforms' test_NonbondedMethod (TestForceField.AmoebaTestForceField.test_NonbondedMethod) Test both options for the nonbondedMethod parameter. ... ok test_RigidWater (TestForceField.AmoebaTestForceField.test_RigidWater) Test that AMOEBA creates rigid water with the correct geometry. ... ok test_CharmmPolar (TestForceField.TestForceField.test_CharmmPolar) Test the CHARMM polarizable force field. ... skipped 'Skipping test failing due to missing platforms' test_CustomNonbondedGenerator (TestForceField.TestForceField.test_CustomNonbondedGenerator) Test the CustomNonbondedForce generator ... ok test_Cutoff (TestForceField.TestForceField.test_Cutoff) Test to make sure the nonbondedCutoff parameter is passed correctly. ... ok test_DispersionCorrection (TestForceField.TestForceField.test_DispersionCorrection) Test to make sure that the dispersion/long-range correction is set properly. ... ok test_Disulfides (TestForceField.TestForceField.test_Disulfides) Test that various force fields handle disulfides correctly. ... ok test_DrudeMass (TestForceField.TestForceField.test_DrudeMass) Test that setting the mass of Drude particles works correctly. ... ok test_Forces (TestForceField.TestForceField.test_Forces) Compute forces and compare them to ones generated with a previous version of OpenMM to ensure they haven't changed. ... ok test_Glycam (TestForceField.TestForceField.test_Glycam) Test computing energy with GLYCAM. ... ok test_HydrogenMass (TestForceField.TestForceField.test_HydrogenMass) Test that altering the mass of hydrogens works correctly. ... ok test_IdenticalTemplates (TestForceField.TestForceField.test_IdenticalTemplates) Test a case where patches produce two identical templates. ... ok test_IgnoreExternalBonds (TestForceField.TestForceField.test_IgnoreExternalBonds) Test the ignoreExternalBonds option ... ok test_ImplicitSolvent (TestForceField.TestForceField.test_ImplicitSolvent) Test the four types of implicit solvents using the implicitSolvent ... ok test_ImplicitSolventForces (TestForceField.TestForceField.test_ImplicitSolventForces) Compute forces for different implicit solvent types, and compare them to ones generated with AmberPrmtopFile. ... ok test_ImplicitSolventParameters (TestForceField.TestForceField.test_ImplicitSolventParameters) Test that solventDielectric and soluteDielectric are passed correctly ... ok test_ImpropersOrdering (TestForceField.TestForceField.test_ImpropersOrdering) Test correctness of the ordering of atom indexes in improper torsions ... ok test_ImpropersOrdering_smirnoff (TestForceField.TestForceField.test_ImpropersOrdering_smirnoff) Test correctness of the ordering of atom indexes in improper torsions ... ok test_Includes (TestForceField.TestForceField.test_Includes) Test using a ForceField that includes other files. ... ok test_InitializationScript (TestForceField.TestForceField.test_InitializationScript) Test that tags get executed. ... ok test_LennardJonesGenerator (TestForceField.TestForceField.test_LennardJonesGenerator) Test the LennardJones generator ... ok test_MultipleFilesandForceTags (TestForceField.TestForceField.test_MultipleFilesandForceTags) Test that the order of listing of multiple ffxmls does not matter. ... ok test_NBFix (TestForceField.TestForceField.test_NBFix) Test using LennardJonesGenerator to implement NBFix terms. ... ok test_NonbondedMethod (TestForceField.TestForceField.test_NonbondedMethod) Test all six options for the nonbondedMethod parameter. ... ok test_Opc3Energy (TestForceField.TestForceField.test_Opc3Energy) ... ok test_OpcEnergy (TestForceField.TestForceField.test_OpcEnergy) ... ok test_PeriodicBoxVectors (TestForceField.TestForceField.test_PeriodicBoxVectors) Test setting the periodic box vectors. ... ok test_ProgrammaticForceField (TestForceField.TestForceField.test_ProgrammaticForceField) Test building a ForceField programmatically. ... ok test_RemoveCMMotion (TestForceField.TestForceField.test_RemoveCMMotion) Test both options (True and False) for the removeCMMotion parameter. ... ok test_ResidueAttributes (TestForceField.TestForceField.test_ResidueAttributes) Test a ForceField that gets per-particle parameters from residue attributes. ... ok test_ResidueOverriding (TestForceField.TestForceField.test_ResidueOverriding) Test residue overriding via override tag in the XML ... ok test_ResidueTemplateUserChoice (TestForceField.TestForceField.test_ResidueTemplateUserChoice) Test createSystem does not allow multiple matching templates, unless ... ok test_RigidWaterAndConstraints (TestForceField.TestForceField.test_RigidWaterAndConstraints) Test all eight options for the constraints and rigidWater parameters. ... ok test_ScalingFactorCombining (TestForceField.TestForceField.test_ScalingFactorCombining) Tests that FFs can be combined if their scaling factors are very close ... ok test_SwitchingDistance (TestForceField.TestForceField.test_SwitchingDistance) Test that the switchDistance parameter is processed correctly. ... ok test_UnusedArgs (TestForceField.TestForceField.test_UnusedArgs) Test that specifying an argument that is never used throws an exception. ... ok test_Wildcard (TestForceField.TestForceField.test_Wildcard) Test that PeriodicTorsionForces using wildcard ('') for atom types / classes in the ffxml are correctly registered ... ok test_flexibleConstraints (TestForceField.TestForceField.test_flexibleConstraints) Test the flexibleConstraints keyword ... ok test_generateTemplatesForUnmatchedResidues (TestForceField.TestForceField.test_generateTemplatesForUnmatchedResidues) Test generation of blank forcefield residue templates for unmatched residues. ... ok test_getMatchingTemplates (TestForceField.TestForceField.test_getMatchingTemplates) Test retrieval of list of templates that match residues in a topology. ... ok test_getUnmatchedResidues (TestForceField.TestForceField.test_getUnmatchedResidues) Test retrieval of list of residues for which no templates are available. ... ok test_residueMatcher (TestForceField.TestForceField.test_residueMatcher) Test using a custom template matcher to select templates. ... ok test_residueTemplateGenerator (TestForceField.TestForceField.test_residueTemplateGenerator) Test the ability to add residue template generators to parameterize unmatched residues. ... ok test1 (TestForceGroups.TestForceGroups.test1) ... ok test2 (TestForceGroups.TestForceGroups.test2) ... ok test3 (TestForceGroups.TestForceGroups.test3) ... ok test_CustomHbondGenerator (TestGenerators.TestGenerators.test_CustomHbondGenerator) Test the generator for CustomHbondForce. ... ok test_CustomHbondGenerator2 (TestGenerators.TestGenerators.test_CustomHbondGenerator2) Test the generator for CustomHbondForce with different parameters. ... ok test_Triclinic (TestGromacsGroFile.TestGromacsGroFile.test_Triclinic) Test parsing a file that describes a triclinic box. ... ok test_Cutoff (TestGromacsTopFile.TestGromacsTopFile.test_Cutoff) Test to make sure the nonbondedCutoff parameter is passed correctly. ... skipped 'GROMACS is not installed' test_EwaldErrorTolerance (TestGromacsTopFile.TestGromacsTopFile.test_EwaldErrorTolerance) Test to make sure the ewaldErrorTolerance parameter is passed correctly. ... skipped 'GROMACS is not installed' test_GROMOS (TestGromacsTopFile.TestGromacsTopFile.test_GROMOS) Test a system using the GROMOS 54a7 force field. ... skipped 'GROMACS is not installed' test_HydrogenMass (TestGromacsTopFile.TestGromacsTopFile.test_HydrogenMass) Test that altering the mass of hydrogens works correctly. ... skipped 'GROMACS is not installed' test_NonbondedMethod (TestGromacsTopFile.TestGromacsTopFile.test_NonbondedMethod) Test all six options for the nonbondedMethod parameter. ... skipped 'GROMACS is not installed' test_RemoveCMMotion (TestGromacsTopFile.TestGromacsTopFile.test_RemoveCMMotion) Test both options (True and False) for the removeCMMotion parameter. ... skipped 'GROMACS is not installed' test_RigidWaterAndConstraints (TestGromacsTopFile.TestGromacsTopFile.test_RigidWaterAndConstraints) Test all eight options for the constraints and rigidWater parameters. ... skipped 'GROMACS is not installed' test_SMOG (TestGromacsTopFile.TestGromacsTopFile.test_SMOG) Test to ensure that SMOG models can be run without problems ... skipped 'GROMACS is not installed' test_SwitchingFunction (TestGromacsTopFile.TestGromacsTopFile.test_SwitchingFunction) Test using a switching function. ... skipped 'GROMACS is not installed' test_VirtualParticle (TestGromacsTopFile.TestGromacsTopFile.test_VirtualParticle) Test virtual particle works correctly. ... skipped 'GROMACS is not installed' test_Vsite3 (TestGromacsTopFile.TestGromacsTopFile.test_Vsite3) Test a three particle virtual site. ... skipped 'GROMACS is not installed' test_ff99SBILDN (TestGromacsTopFile.TestGromacsTopFile.test_ff99SBILDN) Test Gromacs topology #define replacement as used in ff99SB-ILDN ... skipped 'GROMACS is not installed' test_ionic (TestGromacsTopFile.TestGromacsTopFile.test_ionic) Test simulating an ionic liquid ... skipped 'GROMACS is not installed' testBadGroups (TestIntegrators.TestIntegrators.testBadGroups) Test the MTS integrator with bad force group substeps. ... ok testDrudeNoseHooverIntegrator (TestIntegrators.TestIntegrators.testDrudeNoseHooverIntegrator) Test the DrudeNoseHooverIntegrator ... skipped 'Skipping test failing due to missing platforms' testMTSIntegratorConstraints (TestIntegrators.TestIntegrators.testMTSIntegratorConstraints) Test the MTS integrator energy conservation on a system of constrained particles with no inner force (just constraints) ... ok testMTSIntegratorExplicit (TestIntegrators.TestIntegrators.testMTSIntegratorExplicit) Test the MTS integrator on an explicit solvent system ... ok testMTSLangevinIntegrator (TestIntegrators.TestIntegrators.testMTSLangevinIntegrator) Test the MTSLangevinIntegrator on an explicit solvent system ... ok testMTSLangevinIntegratorFriction (TestIntegrators.TestIntegrators.testMTSLangevinIntegratorFriction) Test the MTSLangevinIntegrator on a force-free particle to ensure friction is properly accounted for (issue #3790) ... ok testNoseHooverIntegrator (TestIntegrators.TestIntegrators.testNoseHooverIntegrator) Test partial thermostating in the NoseHooverIntegrator (only API) ... ok testHarmonicOscillator (TestMetadynamics.TestMetadynamics.testHarmonicOscillator) Test running metadynamics on a harmonic oscillator. ... ok test_add (TestModeller.TestModeller.test_add) Test the add() method. ... ok test_addExtraParticles (TestModeller.TestModeller.test_addExtraParticles) Test addExtraParticles(). ... ok test_addHydrogensASH (TestModeller.TestModeller.test_addHydrogensASH) Test of addHydrogens() in which we force ASH to be a variant using the variants parameter. ... ok test_addHydrogensCYX (TestModeller.TestModeller.test_addHydrogensCYX) Test of addHydrogens() in which we force CYX to be a variant using the variants parameter. ... ok test_addHydrogensGLH (TestModeller.TestModeller.test_addHydrogensGLH) Test of addHydrogens() in which we force GLH to be a variant using the variants parameter. ... ok test_addHydrogensGlycam (TestModeller.TestModeller.test_addHydrogensGlycam) Test adding hydrogens for GLYCAM. ... ok test_addHydrogensLYN (TestModeller.TestModeller.test_addHydrogensLYN) Test of addHydrogens() in which we force LYN to be a variant using the variants parameter. ... ok test_addHydrogensPdb2 (TestModeller.TestModeller.test_addHydrogensPdb2) Test the addHydrogens() method on the T4-lysozyme-L99A pdb file. ... ok test_addHydrogensPdb3 (TestModeller.TestModeller.test_addHydrogensPdb3) Test the addHydrogens() method on the metallothionein pdb file. ... ok test_addHydrogensPdb3_keepPositions (TestModeller.TestModeller.test_addHydrogensPdb3_keepPositions) Test addHydrogens() does not change existing Hs positions ... ok test_addHydrogenspH11 (TestModeller.TestModeller.test_addHydrogenspH11) Test of addHydrogens() with pH=11. ... ok test_addHydrogenspH4 (TestModeller.TestModeller.test_addHydrogenspH4) Test of addHydrogens() with pH=4. ... ok test_addHydrogenspH9 (TestModeller.TestModeller.test_addHydrogenspH9) Test of addHydrogens() with pH=9. ... ok test_addMembrane (TestModeller.TestModeller.test_addMembrane) Test adding a membrane to a realistic system. ... skipped 'Skipping a test which takes too long' test_addSolventBoxShape (TestModeller.TestModeller.test_addSolventBoxShape) Test the addSolvent() method; test the different box shapes. ... ok test_addSolventIons (TestModeller.TestModeller.test_addSolventIons) Test the addSolvent() method with all possible choices for positive and negative ions. ... ok test_addSolventNegativeSolvent (TestModeller.TestModeller.test_addSolventNegativeSolvent) Test the addSolvent() method; test adding ions to a negatively charged solvent. ... ok test_addSolventNeutralSolvent (TestModeller.TestModeller.test_addSolventNeutralSolvent) Test the addSolvent() method; test adding ions to neutral solvent. ... ok test_addSolventPeriodicBox (TestModeller.TestModeller.test_addSolventPeriodicBox) Test the addSolvent() method; test that the five ways of passing in the periodic box all work. ... ok test_addSolventPositiveSolvent (TestModeller.TestModeller.test_addSolventPositiveSolvent) Test the addSolvent() method; test adding ions to a positively charged solvent. ... ok test_addSolventWaterModels (TestModeller.TestModeller.test_addSolventWaterModels) Test all addSolvent() method with all possible water models. ... ok test_addVirtualSites (TestModeller.TestModeller.test_addVirtualSites) Test adding extra particles defined by virtual sites. ... ok test_convertWater (TestModeller.TestModeller.test_convertWater) Test the convertWater() method. ... ok test_delete (TestModeller.TestModeller.test_delete) Test the delete() method. ... ok test_deleteWater (TestModeller.TestModeller.test_deleteWater) Test the deleteWater() method. ... ok test_multiSiteIon (TestModeller.TestModeller.test_multiSiteIon) Test adding extra particles whose positions are determined based on bonds. ... ok test_removeExtraHydrogens (TestModeller.TestModeller.test_removeExtraHydrogens) Test that addHydrogens() can remove hydrogens that shouldn't be there. ... ok test_CMAP (TestNumpyCompatibility.TestNumpyCompatibility.test_CMAP) ... ok test_int64 (TestNumpyCompatibility.TestNumpyCompatibility.test_int64) ... ok test_periodicBoxVectors (TestNumpyCompatibility.TestNumpyCompatibility.test_periodicBoxVectors) ... ok test_setPositions (TestNumpyCompatibility.TestNumpyCompatibility.test_setPositions) ... ok test_setPositions_units (TestNumpyCompatibility.TestNumpyCompatibility.test_setPositions_units) ... ok test_setVelocities (TestNumpyCompatibility.TestNumpyCompatibility.test_setVelocities) ... ok test_setVelocities_units (TestNumpyCompatibility.TestNumpyCompatibility.test_setVelocities_units) ... ok test_tabulatedFunction (TestNumpyCompatibility.TestNumpyCompatibility.test_tabulatedFunction) ... ok testNumpyAttributes (TestNumpyCompatibility.TestNumpyUnits.testNumpyAttributes) ... ok testAlaAlaAla (TestPatches.TestPatches.testAlaAlaAla) Test constructing a System that involves two patches. ... ok testApplyPatch (TestPatches.TestPatches.testApplyPatch) Test applying a patch to a template. ... ok testDisulfidePatch (TestPatches.TestPatches.testDisulfidePatch) ... ok testParseMultiresiduePatch (TestPatches.TestPatches.testParseMultiresiduePatch) Test parsing a tag that affects two residues. ... ok testParsePatch (TestPatches.TestPatches.testParsePatch) Test parsing a tag. ... ok test_AltLocs (TestPdbFile.TestPdbFile.test_AltLocs) Test reading a file that includes AltLocs ... ok test_BinaryStream (TestPdbFile.TestPdbFile.test_BinaryStream) Test reading a stream that was opened in binary mode. ... ok test_ExtraParticles (TestPdbFile.TestPdbFile.test_ExtraParticles) Test reading, and writing and re-reading of a file containing extra particle atoms. ... ok test_LargeFile (TestPdbFile.TestPdbFile.test_LargeFile) Write and read a file with more than 100,000 atoms ... ok test_Triclinic (TestPdbFile.TestPdbFile.test_Triclinic) Test parsing a file that describes a triclinic box. ... ok test_WriteFile (TestPdbFile.TestPdbFile.test_WriteFile) Write a file, read it back, and make sure it matches the original. ... ok testBondSubset (TestPdbReporter.TestPDBReporter.testBondSubset) Test that CONECT records are output correctly when using atomSubset ... ok testInvalidSubsets (TestPdbReporter.TestPDBReporter.testInvalidSubsets) Test that an exception is raised when the indices in atomSubset are invalid ... ok testSubset (TestPdbReporter.TestPDBReporter.testSubset) Test writing out a subset of atoms ... ok testWriteAll (TestPdbReporter.TestPDBReporter.testWriteAll) Test all atoms are written when atomSubset is not specified ... ok testBondSubset (TestPdbReporter.TestPDBxReporter.testBondSubset) Test that struct_conn records are output correctly when using atomSubset ... ok testInvalidSubsets (TestPdbReporter.TestPDBxReporter.testInvalidSubsets) Test that an exception is raised when the indices in atomSubset are invalid ... ok testSubset (TestPdbReporter.TestPDBxReporter.testSubset) Test writing out a subset of atoms ... ok testWriteAll (TestPdbReporter.TestPDBxReporter.testWriteAll) Test all atoms are written when atomSubset is not specified ... ok testBonds (TestPdbxFile.TestPdbxFile.testBonds) Test reading and writing a file that includes bonds. ... ok testInsertionCodes (TestPdbxFile.TestPdbxFile.testInsertionCodes) Test reading a file that uses insertion codes. ... ok testMultiChain (TestPdbxFile.TestPdbxFile.testMultiChain) Test reading and writing a file that includes multiple chains ... ok testReporterExplicit (TestPdbxFile.TestPdbxFile.testReporterExplicit) Tests the PDBxReporter with PBC ... ok testReporterImplicit (TestPdbxFile.TestPdbxFile.testReporterImplicit) Tests the PDBxReporter without PBC ... ok test_FormatConversion (TestPdbxFile.TestPdbxFile.test_FormatConversion) Test conversion from PDB to PDBx ... ok test_Triclinic (TestPdbxFile.TestPdbxFile.test_Triclinic) Test parsing a file that describes a triclinic box. ... ok testCopyForce (TestPickle.TestPickle.testCopyForce) Test copying a Python object whose class extends Force. ... ok testCopyIntegrator (TestPickle.TestPickle.testCopyIntegrator) Test copying a Python object whose class extends Integrator. ... ok test_deepcopy (TestPickle.TestPickle.test_deepcopy) Test that serialization/deserialization works (via deepcopy). ... ok testHarmonicOscillator (TestSimulatedTempering.TestSimulatedTempering.testHarmonicOscillator) Test running simulated tempering on a harmonic oscillator. ... ok testHarmonicOscillatorNPT (TestSimulatedTempering.TestSimulatedTempering.testHarmonicOscillatorNPT) Test running simulated tempering on a harmonic oscillator with a Monte Carlo barostat. ... ok testCheckpointing (TestSimulation.TestSimulation.testCheckpointing) Test that checkpointing works correctly. ... ok testLoadFromXML (TestSimulation.TestSimulation.testLoadFromXML) Test creating a Simulation from XML files ... ok testMinimizationReporter (TestSimulation.TestSimulation.testMinimizationReporter) Test invoking a reporter during minimization. ... ok testRunForClockTime (TestSimulation.TestSimulation.testRunForClockTime) Test the runForClockTime() method. ... ok testSaveState (TestSimulation.TestSimulation.testSaveState) Test that saving States works correctly. ... ok testStep (TestSimulation.TestSimulation.testStep) Test the step() method. ... ok testWrappedCoordinates (TestSimulation.TestSimulation.testWrappedCoordinates) Test generating reports with and without wrapped coordinates. ... ok testAppend (TestStateDataReporter.TestStateDataReporter.testAppend) Test appending to the StateDataReporter output. ... /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/tests/TestStateDataReporter.py:33: ResourceWarning: unclosed file <_io.TextIOWrapper name='/tmp/tmp31swg7z5/templog.txt' mode='r' encoding='utf-8'> lines = open(filename).read().split('\n') ResourceWarning: Enable tracemalloc to get the object allocation traceback ok test_1 (TestSwigWrappers.TestSwigWrappers.test_1) ... ok test_bondtype_singleton (TestTopology.TestTopology.test_bondtype_singleton) Tests that the bond types are really singletons ... ok test_getters (TestTopology.TestTopology.test_getters) Test getters for number of atoms, residues, chains. ... ok test_residue_bonds (TestTopology.TestTopology.test_residue_bonds) Test retrieving bonds for a residue produces expected results. ... ok testComputePBCVectors (TestUnitCell.TestUnitCell.testComputePBCVectors) Tests computing periodic box vectors ... ok testReducePBCVectors (TestUnitCell.TestUnitCell.testReducePBCVectors) Checks that reducePeriodicBoxVectors properly reduces vectors ... ok testMultiplication (TestUnits.TestNumpyUnits.testMultiplication) Tests that units override numpy.ndarray multiplication ... ok testNumpyDeepCopy (TestUnits.TestNumpyUnits.testNumpyDeepCopy) Check that deepcopy on numpy array does not strip units ... ok testNumpyDivision (TestUnits.TestNumpyUnits.testNumpyDivision) Tests that division of numpy Quantities works correctly ... ok testNumpyFunctions (TestUnits.TestNumpyUnits.testNumpyFunctions) Tests various numpy attributes that they result in Quantities ... ok testNumpyIsString (TestUnits.TestNumpyUnits.testNumpyIsString) Tests the internal _is_string method with numpy Quantities ... ok testNumpyQuantity (TestUnits.TestNumpyUnits.testNumpyQuantity) Tests that numpy arrays can form Quantity values ... ok testAngleQuantities (TestUnits.TestUnits.testAngleQuantities) Tests angle measurements ... ok testBadQuantityComparisons (TestUnits.TestUnits.testBadQuantityComparisons) Checks that comparisons of incompatible units fails ... ok testBadQuantityConversions (TestUnits.TestUnits.testBadQuantityConversions) Tests that conversions to incompatible units fails ... ok testBadQuantityMaths (TestUnits.TestUnits.testBadQuantityMaths) Tests that Maths of incompatible units properly fails ... ok testBaseScaleMix (TestUnits.TestUnits.testBaseScaleMix) Test mixing of BaseUnit and ScaledUnit instances ... ok testBaseUnit (TestUnits.TestUnits.testBaseUnit) Tests the creation of a base unit furlong ... ok testCalorieConversion (TestUnits.TestUnits.testCalorieConversion) Tests unit conversion with calories to joules ... ok testChemistryProblems (TestUnits.TestUnits.testChemistryProblems) Tests some gen-chem applications with Quantity's ... ok testCollectionQuantities (TestUnits.TestUnits.testCollectionQuantities) Tests the use of collections as Quantity values ... ok testCollectionQuantityOperations (TestUnits.TestUnits.testCollectionQuantityOperations) Tests that Quantity collections behave correctly ... ok testComparisonOperators (TestUnits.TestUnits.testComparisonOperators) Tests unit comparison operators ... ok testCompositeUnits (TestUnits.TestUnits.testCompositeUnits) Tests the creation of a composite unit ... ok testConversionFactorTo (TestUnits.TestUnits.testConversionFactorTo) Tests the "conversion_factor_to" attribute of Units ... ok testCreateNewBaseUnit (TestUnits.TestUnits.testCreateNewBaseUnit) Tests creating a new base unit ... ok testCreateNewScaledUnit (TestUnits.TestUnits.testCreateNewScaledUnit) Tests creating a new ScaledUnit ... ok testCreateNewUnit (TestUnits.TestUnits.testCreateNewUnit) Tests creating a new Unit ... ok testDimensionless (TestUnits.TestUnits.testDimensionless) Tests the properties of unit.dimensionless ... ok testGetUnitAttributes (TestUnits.TestUnits.testGetUnitAttributes) Tests the unit attribute `getters' ... ok testIllegalQuantityOps (TestUnits.TestUnits.testIllegalQuantityOps) Test that illegal operations on Quantity objects fails ... ok testIsCompatible (TestUnits.TestUnits.testIsCompatible) Tests the is_compatible attribute of units ... ok testIsQuantity (TestUnits.TestUnits.testIsQuantity) Tests if is_quantity can detect Quantities vs. scalars and units ... ok testIsUnit (TestUnits.TestUnits.testIsUnit) Tests the unit.is_unit introspective function ... ok testMisc (TestUnits.TestUnits.testMisc) Miscellaneous tests for the unit package ... ok testMutableQuantityOperations (TestUnits.TestUnits.testMutableQuantityOperations) Tests that mutable Quantity objects do not get unexpectedly changed ... ok testPresetUnitSystems (TestUnits.TestUnits.testPresetUnitSystems) Tests some of the pre-set UnitSystem's ... ok testQuantityBadSqrt (TestUnits.TestUnits.testQuantityBadSqrt) Tests that taking sqrt of Quantities with incompatible units fails ... ok testQuantityCollectionMethods (TestUnits.TestUnits.testQuantityCollectionMethods) Tests some sequence methods on Quantity objects (no numpy) ... ok testQuantityComparisons (TestUnits.TestUnits.testQuantityComparisons) Tests binary comparison operators between Quantity ... ok testQuantityComplicatedMaths (TestUnits.TestUnits.testQuantityComplicatedMaths) Tests a complicated set of mathematical operations on a Quantity ... ok testQuantityFormat (TestUnits.TestUnits.testQuantityFormat) Tests the format method on Quantity instances ... ok testQuantityMaths (TestUnits.TestUnits.testQuantityMaths) Tests dimensional analysis & maths on and b/w Quantity objects ... ok testQuantitySqrt (TestUnits.TestUnits.testQuantitySqrt) Tests taking the square root of quantities ... ok testReduceUnit (TestUnits.TestUnits.testReduceUnit) Tests the reduce_unit functionality ... ok testScalarQuantityConstructor (TestUnits.TestUnits.testScalarQuantityConstructor) Tests creating a Quantity using the Quantity constructor ... ok testScalarQuantityMultiplyDivide (TestUnits.TestUnits.testScalarQuantityMultiplyDivide) Tests creating a scalar Quantity object by * or / by a Unit ... ok testScaledUnit (TestUnits.TestUnits.testScaledUnit) Tests ScaledUnit class with kilokelvins ... ok testString (TestUnits.TestUnits.testString) Tests unit handling with strings, which should be dimensionless ... ok testToBaseUnit (TestUnits.TestUnits.testToBaseUnit) Tests the "get_conversion_factor_to_base_units" method ... ok testTruthiness (TestUnits.TestUnits.testTruthiness) Tests the truthiness of units ... ok testUnaryOperators (TestUnits.TestUnits.testUnaryOperators) Tests unary operators on units ... ok testUnitBadSqrt (TestUnits.TestUnits.testUnitBadSqrt) Tests that illegal sqrt calls on incompatible units fails ... ok testUnitDivision (TestUnits.TestUnits.testUnitDivision) Tests the division of units and is_dimensionless ... ok testUnitMathModule (TestUnits.TestUnits.testUnitMathModule) Tests the unit_math functions on Quantity objects ... ok testUnitMathModuleBadInput (TestUnits.TestUnits.testUnitMathModuleBadInput) Tests that bad units to unit_math fails appropriately ... ok testUnitSqrt (TestUnits.TestUnits.testUnitSqrt) Tests taking the square root of units ... ok testUnitString (TestUnits.TestUnits.testUnitString) Test the Unit->str casting functionality ... ok testUnitSystem (TestUnits.TestUnits.testUnitSystem) Tests the creation of a UnitSystem and its behavior ... ok testValueInUnit (TestUnits.TestUnits.testValueInUnit) Tests the value_in_unit functionality for Quantity ... ok testNegation (TestVec3.TestVectors.testNegation) ... ok testVec3Addition (TestVec3.TestVectors.testVec3Addition) ... ok testVec3Attributes (TestVec3.TestVectors.testVec3Attributes) ... ok testVec3Division (TestVec3.TestVectors.testVec3Division) ... ok testVec3Equality (TestVec3.TestVectors.testVec3Equality) ... ok testVec3Multiplication (TestVec3.TestVectors.testVec3Multiplication) ... ok testVec3Subtraction (TestVec3.TestVectors.testVec3Subtraction) ... ok testAppend (TestXtcFile.TestXtcFile.testAppend) Test appending to an existing trajectory. ... ok testLongTrajectory (TestXtcFile.TestXtcFile.testLongTrajectory) Test writing a trajectory that has more than 2^31 steps. ... ok test_xtc_box_from_topology (TestXtcFile.TestXtcFile.test_xtc_box_from_topology) Test the XTC file by writing a trajectory and reading it back. Letting the box be set from the topology ... ok test_xtc_cubic (TestXtcFile.TestXtcFile.test_xtc_cubic) Test the XTC file by writing a trajectory and reading it back. Using a cubic box ... ok test_xtc_triclinic (TestXtcFile.TestXtcFile.test_xtc_triclinic) Test the XTC file by writing a trajectory and reading it back. Using a triclinic box ... ok ---------------------------------------------------------------------- Ran 327 tests in 2701.160s OK (skipped=21) #"Steps" "Temperature (K)" "200K Weight" "216.012K Weight" "233.306K Weight" "251.984K Weight" "272.158K Weight" "293.947K Weight" "317.48K Weight" "342.898K Weight" "370.35K Weight" "400K Weight" 10000 200 0 -0.179688 -0.320312 -0.453125 -0.289062 -0.585938 -0.609375 -0.367188 -0.46875 -0.757812 20000 342.898 0 -0.196594 -0.241455 -0.38562 -0.258911 -0.470154 -0.51001 -0.349487 -0.436707 -0.676514 30000 251.984 0 -0.196189 -0.241004 -0.384269 -0.258636 -0.469188 -0.509524 -0.349157 -0.43654 -0.675307 40000 370.35 0 -0.196186 -0.241 -0.384268 -0.258633 -0.469185 -0.509523 -0.349159 -0.436539 -0.675307 50000 342.898 0 -0.196186 -0.241 -0.384268 -0.258633 -0.469185 -0.509523 -0.349159 -0.436539 -0.675307 60000 233.306 0 -0.196186 -0.241 -0.384268 -0.258633 -0.469185 -0.509523 -0.349159 -0.436539 -0.675307 70000 293.947 0 -0.196186 -0.241 -0.384268 -0.258633 -0.469185 -0.509523 -0.349159 -0.436539 -0.675307 80000 293.947 0 -0.196186 -0.241 -0.384268 -0.258633 -0.469185 -0.509523 -0.349159 -0.436539 -0.675307 90000 216.012 0 -0.196186 -0.241 -0.384268 -0.258633 -0.469185 -0.509523 -0.349159 -0.436539 -0.675307 100000 233.306 0 -0.196186 -0.241 -0.384268 -0.258633 -0.469185 -0.509523 -0.349159 -0.436539 -0.675307 110000 400 0 -0.196186 -0.241 -0.384268 -0.258633 -0.469185 -0.509523 -0.349159 -0.436539 -0.675307 #"Steps" "Temperature (K)" "200K Weight" "216.012K Weight" "233.306K Weight" "251.984K Weight" "272.158K Weight" "293.947K Weight" "317.48K Weight" "342.898K Weight" "370.35K Weight" "400K Weight" make[1]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg' create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=cmake dh_prep -O--buildsystem=cmake debian/rules override_dh_auto_install make[1]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg' dh_auto_install -O--buildsystem=cmake cd obj-x86_64-linux-gnu && make -j20 install DESTDIR=/build/reproducible-path/openmm-8.1.1\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/openmm-8.1.1+dfsg -B/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[3]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'preinstall'. make[3]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "Release" -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/bin/TestReferenceHarmonicBondForce -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/bin/TestReferenceHarmonicBondForce" to "" -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLArray.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLBondedUtilities.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLCompact.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLContext.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLEvent.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLExpressionUtilities.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLFFT3D.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLForceInfo.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLIntegrationUtilities.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLKernel.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLKernelFactory.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLKernels.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLNonbondedUtilities.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLParallelKernels.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLParameterSet.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLPlatform.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLProgram.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/opencl/OpenCLSort.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/opencl/opencl.hpp -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/plugins/libOpenMMOpenCL.so -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/plugins/libOpenMMOpenCL.so" to "" -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/common/ArrayInterface.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/common/BondedUtilities.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/common/CommonKernels.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/common/ComputeArray.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/common/ComputeContext.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/common/ComputeEvent.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/common/ComputeForceInfo.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/common/ComputeKernel.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/common/ComputeParameterInfo.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/common/ComputeParameterSet.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/common/ComputeProgram.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/common/ComputeVectorTypes.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/common/ContextSelector.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/common/ExpressionUtilities.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/common/IntegrationUtilities.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/common/NonbondedUtilities.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/common/windowsExportCommon.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/cpu/AlignedArray.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/cpu/CpuBondForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/cpu/CpuCustomGBForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/cpu/CpuCustomManyParticleForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/cpu/CpuCustomNonbondedForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/cpu/CpuCustomNonbondedForceFvec.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/cpu/CpuGBSAOBCForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/cpu/CpuGayBerneForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/cpu/CpuKernelFactory.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/cpu/CpuKernels.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/cpu/CpuLangevinDynamics.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/cpu/CpuLangevinMiddleDynamics.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/cpu/CpuNeighborList.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/cpu/CpuNonbondedForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/cpu/CpuNonbondedForceFvec.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/cpu/CpuPlatform.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/cpu/CpuRandom.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/cpu/CpuSETTLE.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/cpu/windowsExportCpu.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/plugins/libOpenMMCPU.so -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/plugins/libOpenMMCPU.so" to "" -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/plugins/libOpenMMAmoebaReference.so -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/plugins/libOpenMMAmoebaReference.so" to "" -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/plugins/libOpenMMAmoebaOpenCL.so -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/plugins/libOpenMMAmoebaOpenCL.so" to "" -- Up-to-date: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/plugins/libOpenMMAmoebaOpenCL.so -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/OpenMMAmoeba.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/AmoebaGeneralizedKirkwoodForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/AmoebaMultipoleForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/AmoebaTorsionTorsionForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/AmoebaVdwForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/AmoebaWcaDispersionForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/HippoNonbondedForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/amoebaKernels.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/AmoebaGeneralizedKirkwoodForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/AmoebaMultipoleForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/AmoebaTorsionTorsionForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/AmoebaVdwForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/AmoebaWcaDispersionForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/HippoNonbondedForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/windowsExportAmoeba.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/libOpenMMAmoeba.so -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/libOpenMMAmoeba.so" to "" -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/plugins/libOpenMMRPMDReference.so -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/plugins/libOpenMMRPMDReference.so" to "" -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/plugins/libOpenMMRPMDOpenCL.so -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/plugins/libOpenMMRPMDOpenCL.so" to "" -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/RPMDIntegrator.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/RPMDMonteCarloBarostat.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/RPMDUpdater.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/RpmdKernels.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/RPMDMonteCarloBarostatImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/windowsExportRpmd.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/libOpenMMRPMD.so -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/libOpenMMRPMD.so" to "" -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/plugins/libOpenMMDrudeReference.so -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/plugins/libOpenMMDrudeReference.so" to "" -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/plugins/libOpenMMDrudeOpenCL.so -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/plugins/libOpenMMDrudeOpenCL.so" to "" -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/OpenMMDrude.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/DrudeForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/DrudeIntegrator.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/DrudeKernels.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/DrudeLangevinIntegrator.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/DrudeNoseHooverIntegrator.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/DrudeSCFIntegrator.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/DrudeForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/windowsExportDrude.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/libOpenMMDrude.so -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/libOpenMMDrude.so" to "" -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/plugins/libOpenMMPME.so -- Set non-toolchain portion of runtime path of "/build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/plugins/libOpenMMPME.so" to "" -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/OpenMM.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/Kernel.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/KernelFactory.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/KernelImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/Platform.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/PluginInitializer.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/kernels.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/ATMForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/AndersenThermostat.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/BrownianIntegrator.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/CMAPTorsionForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/CMMotionRemover.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/CompoundIntegrator.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/Context.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/CustomAngleForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/CustomBondForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/CustomCVForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/CustomCentroidBondForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/CustomCompoundBondForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/CustomExternalForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/CustomGBForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/CustomHbondForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/CustomIntegrator.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/CustomManyParticleForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/CustomNonbondedForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/CustomTorsionForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/Force.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/GBSAOBCForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/GayBerneForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/HarmonicAngleForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/HarmonicBondForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/Integrator.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/LangevinIntegrator.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/LangevinMiddleIntegrator.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/LocalEnergyMinimizer.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/MonteCarloAnisotropicBarostat.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/MonteCarloBarostat.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/MonteCarloFlexibleBarostat.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/MonteCarloMembraneBarostat.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/NonbondedForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/NoseHooverChain.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/NoseHooverIntegrator.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/OpenMMException.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/PeriodicTorsionForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/RBTorsionForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/RMSDForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/State.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/System.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/TabulatedFunction.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/Units.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/VariableLangevinIntegrator.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/VariableVerletIntegrator.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/Vec3.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/VerletIntegrator.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/VirtualSite.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/ATMForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/AndersenThermostatImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/AssertionUtilities.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/CMAPTorsionForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/CMMotionRemoverImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/CompiledExpressionSet.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/ContextImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/CustomAngleForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/CustomBondForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/CustomCPPForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/CustomCVForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/CustomCentroidBondForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/CustomCompoundBondForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/CustomExternalForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/CustomGBForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/CustomHbondForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/CustomIntegratorUtilities.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/CustomManyParticleForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/CustomNonbondedForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/CustomTorsionForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/ForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/GBSAOBCForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/GayBerneForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/HarmonicAngleForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/HarmonicBondForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/MSVC_erfc.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/Messages.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/MonteCarloAnisotropicBarostatImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/MonteCarloBarostatImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/MonteCarloFlexibleBarostatImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/MonteCarloMembraneBarostatImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/NonbondedForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/OSRngSeed.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/PeriodicTorsionForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/RBTorsionForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/RMSDForceImpl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/SplineFitter.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/ThreadPool.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/VectorExpression.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/hardware.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/timer.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/vectorize.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/vectorizeAvx.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/vectorizeAvx2.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/vectorize_neon.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/vectorize_pnacl.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/vectorize_ppc.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/vectorize_sse.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/internal/windowsExport.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ObcParameters.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/RealVec.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceAndersenThermostat.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceAngleBondIxn.h -- Installing: 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/build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceKernels.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceLJCoulomb14.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceLJCoulombIxn.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceLangevinMiddleDynamics.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceLincsAlgorithm.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceMonteCarloBarostat.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceNeighborList.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceNoseHooverChain.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceNoseHooverDynamics.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceObc.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferencePME.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferencePairIxn.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferencePlatform.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferencePointFunctions.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceProperDihedralBond.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceRMSDForce.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceRbDihedralBond.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceSETTLEAlgorithm.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceStochasticDynamics.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceTabulatedFunction.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceVariableStochasticDynamics.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceVariableVerletDynamics.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceVerletDynamics.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/ReferenceVirtualSites.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/SimTKOpenMMRealType.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/openmm/reference/SimTKOpenMMUtilities.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/lepton/CompiledExpression.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/lepton/CompiledVectorExpression.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/lepton/CustomFunction.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/lepton/Exception.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/lepton/ExpressionProgram.h -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/lepton/ExpressionTreeNode.h -- 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/build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/include/swig/typemaps.i -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/licenses/GPL.txt -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/licenses/LGPL.txt -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/licenses/Licenses.txt -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/HelloArgon.cpp -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/HelloSodiumChloride.cpp -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/HelloEthane.cpp -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/HelloWaterBox.cpp -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/HelloArgonInC.c -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/HelloSodiumChlorideInC.c -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/HelloArgonInFortran.f90 -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/HelloSodiumChlorideInFortran.f90 -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/simulateAmber.py -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/simulatePdb.py -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/simulateGromacs.py -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/benchmark.py -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/argon-chemical-potential.py -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/input.inpcrd -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/input.prmtop -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/input.pdb -- 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/build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/VisualStudio/HelloArgonInFortran.sln -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/VisualStudio/HelloArgonInFortran.vfproj -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/README.txt -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/Makefile -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/NMakefile -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/MakefileNotes.txt -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/examples/Empty.cpp -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/libOpenMM.so.8.1 -- Installing: /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/libOpenMM.so make[2]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu' dh_install -plibopenmm8.1 debian/tmp/usr/lib/libOpenMM.so.* usr/lib/x86_64-linux-gnu dh_install -plibopenmm-dev debian/tmp/usr/lib/libOpenMMAmoeba.so usr/lib/x86_64-linux-gnu/openmm dh_install -plibopenmm-dev debian/tmp/usr/lib/libOpenMMDrude.so usr/lib/x86_64-linux-gnu/openmm dh_install -plibopenmm-dev debian/tmp/usr/lib/libOpenMMRPMD.so usr/lib/x86_64-linux-gnu/openmm dh_install -plibopenmm-dev debian/tmp/usr/lib/libOpenMM.so usr/lib/x86_64-linux-gnu dh_install -plibopenmm-plugins debian/tmp/usr/lib/plugins usr/lib/x86_64-linux-gnu/openmm pybuild --dir obj-x86_64-linux-gnu/python --install I: pybuild base:311: /usr/bin/python3.12 setup.py install --root /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp author Peter Eastman data_files [] description Python wrapper for OpenMM (a C++ MD package) download_url https://openmm.org ext_modules[, , ] license Python Software Foundation License (BSD-like) long_descriptionOpenMM is a toolkit for molecular simulation. It can be used either as a stand-alone application for running simulations, or as a library you call from your own code. It provides a combination of extreme flexibility (through custom forces and integrators), openness, and high performance (especially on recent GPUs) that make it truly unique among simulation codes. name OpenMM package_data{'openmm': [], 'openmm.app': ['data/*.xml', 'data/*.pdb', 'data/amber14/*.xml', 'data/charmm36/*.xml', 'data/implicit/*.xml'], 'openmm.app.internal': []} packages['simtk', 'simtk.unit', 'simtk.openmm', 'simtk.openmm.app', 'openmm', 'openmm.unit', 'openmm', 'openmm.app', 'openmm.app.internal', 'openmm.app.internal.charmm', 'openmm.app.internal.pdbx', 'openmm.app.internal.pdbx.reader', 'openmm.app.internal.pdbx.writer'] platforms ['Linux', 'Mac OS X', 'Windows'] url https://openmm.org version 8.1.1 running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running build running build_py copying openmm/version.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm running build_ext running install_lib creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12 creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/simtk copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/simtk/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/simtk creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/simtk/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/simtk/unit/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/simtk/unit creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/simtk/openmm copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/simtk/openmm/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/simtk/openmm creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/simtk/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/simtk/openmm/app/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/simtk/openmm/app creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/unit.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/constants.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/doctests.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/unit_operators.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/quantity.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/standard_dimensions.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/basedimension.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/__pycache__/standard_dimensions.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/__pycache__/baseunit.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/__pycache__/quantity.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/__pycache__/unit.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/__pycache__/unit_operators.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/__pycache__/basedimension.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/__pycache__/unit_math.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/__pycache__/mymatrix.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/__pycache__/unit_definitions.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/__pycache__/constants.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/__pycache__/prefix.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/mymatrix.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/unit_definitions.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/unit_math.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/prefix.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/unit/baseunit.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/amd.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/xtcfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/statedatareporter.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/singleton.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/xtc_utils.cpython-312-x86_64-linux-gnu.so -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/charmm copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/charmm/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/charmm copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/charmm/_charmmfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/charmm copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/charmm/topologyobjects.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/charmm creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/charmm/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/charmm/__pycache__/_charmmfile.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/charmm/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/charmm/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/charmm/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/charmm/__pycache__/exceptions.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/charmm/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/charmm/__pycache__/topologyobjects.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/charmm/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/charmm/exceptions.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/charmm copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/amber_file_parser.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbstructure.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader/PdbxContainers.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader/PdbxReader.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader/PdbxParser.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader/PdbxReaderTests.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader/__pycache__/PdbxContainers.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader/__pycache__/PdbxReader.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/reader/PdbxReadWriteTests.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/writer copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/writer/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/writer copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/writer/PdbxWriterTests.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/writer copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/writer/PdbxWriter.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/writer creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/pdbx/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/unitcell.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/__pycache__/argtracker.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/__pycache__/amber_file_parser.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/__pycache__/unitcell.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/__pycache__/singleton.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/__pycache__/pdbstructure.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/__pycache__/customgbforces.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/customgbforces.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/compiled.cpython-312-x86_64-linux-gnu.so -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/internal/argtracker.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/xtcreporter.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/topology.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/pdbfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/amberprmtopfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/metadynamics.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/charmmpsffile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/modeller.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/pdbreporter.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/element.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/simulatedtempering.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/desmonddmsfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/amberinpcrdfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/pdbxfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/charmmcrdfiles.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/charmmparameterset.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/checkpointreporter.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/amberprmtopfile.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/xtcreporter.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/metadynamics.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/modeller.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/topology.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/amberinpcrdfile.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/pdbfile.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/xtcfile.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/simulation.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/pdbxfile.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/element.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/charmmpsffile.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/charmmcrdfiles.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/desmonddmsfile.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/statedatareporter.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/dcdfile.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/pdbreporter.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/gromacstopfile.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/simulatedtempering.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/gromacsgrofile.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/forcefield.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/__pycache__/dcdreporter.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__pycache__ creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/implicit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/implicit/obc2.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/implicit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/implicit/gbn2.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/implicit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/implicit/gbn.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/implicit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/implicit/obc1.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/implicit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/implicit/hct.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/implicit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber96_obc.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/absinth.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber96.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/tip4pfb.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber03_obc.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/DMPC.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber99sbnmr.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/opc.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/swm4ndp.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/tip5p.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/DPPC.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/POPE.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36/tip3p-pme-b.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36/tip3p-pme-f.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36/water.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36/tip5p.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36/tip4pew.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36/spce.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36/tip5pew.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm36/tip4p2005.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amoeba2013.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14/lipid17.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14/tip4pfb.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14/protein.ff15ipq.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14/opc.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14/DNA.bsc1.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14/DNA.OL15.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14/tip4pew.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14/spce.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14/RNA.OL3.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14/tip3pfb.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14/tip3p.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14/opc3.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14/protein.ff14SB.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14/GLYCAM_06j-1.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/glycam-hydrogens.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/tip5p.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber99Test.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amoeba2009.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber99_obc.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/POPC.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amberfb15.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/tip4pew.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/spce.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/tip3p.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/pdbNames.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/iamoeba.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/swm4ndp.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber99sb.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber14-all.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber10.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/tip3pfb.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/spce.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/residues.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/tip3p.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm_polar_2013.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber99sbildn.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/DLPE.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/opc3.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/hydrogens.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber10_obc.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/tip4pew.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/charmm_polar_2019.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/DOPC.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amoeba2018.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/test.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amoeba2018_gk.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/DLPC.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amoeba2009_gk.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amoeba2013_gk.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/data/amber03.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/dcdreporter.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/checkpointreporter.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/dcdfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/gromacsgrofile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/charmmparameterset.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/simulation.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/gromacstopfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/app/forcefield.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/openmm.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/__pycache__/vec3.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/__pycache__/version.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/__pycache__/amd.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/__pycache__/openmm.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/__pycache__/mtsintegrator.cpython-312.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/version.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/vec3.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/mtsintegrator.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/testInstallation.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/openmm/_openmm.cpython-312-x86_64-linux-gnu.so -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/triclinic.pdbx -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/gpcr.cif -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/water_methanol.prm -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/amoeba-ion-in-water.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/MoS2.prm -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/5dhfr_cube.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/bnz.gro -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/explicit.top -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/aidilnaaaaa.gro -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/water-box-216.prmtop -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/bcd-nabumetone_lig.dms -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/ff_with_includes.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/impropers_ordering_tetrapeptide.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/1ppt.top -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/alanine-dipeptide-implicit.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/ala3_solv.parm7 -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/2ci2.pdb.top -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/par_all36_lipid.prm -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/crdsonly.rst7 -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/aidilnaaaaa.top -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/DNA_mbondi3.prmtop -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/top_all36_cgenff.rtf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/water_methanol.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/nacl-water.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/tip5p.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/altlocs2.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/bcd-nabumetone_rcpt.dms -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/ala_ala_ala.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/alanine-dipeptide-implicit.prmtop -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/par_all36_cgenff.prm -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/peptide_with_tip4p.inpcrd -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/alanine-dipeptide-explicit.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/multichain.pdbx -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/DNA_mbondi3.inpcrd -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/5dhfr_cube.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/ions.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/triclinic.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/chlb_cgenff.crd -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/formaldehyde.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/nucleic.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/alanine-dipeptide-explicit-amber99SBILDN-tip3p.dms -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/chl1.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/toppar_drude_master_protein_2013e.str -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/charmm22.par -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/crds_vels_box.rst7 -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/tip4pew.top -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/toppar_all36_lipid_cholesterol.str -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/ala_ala_ala.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/ionic.gro -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/bnz.top -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/par_all22_prot_with_mass.inp -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/1ppt.gro -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/charmm22.rtf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/Mg_water.prmtop -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/crds_box.rst7 -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/18protein.parm7 -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/ala3_solv_drude.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/alanine-dipeptide-explicit.prmtop -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/crds_vels.rst7 -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/lysozyme-implicit.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/altlocs.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/opcbox.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/opc3box.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/triclinic.gro -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/chlb_cgenff.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/ala3_solv.crd -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/ala_ala_ala.xpsf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/methanol_ions.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems/charmm-solvated copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/charmm-solvated/m14.prm -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems/charmm-solvated copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/charmm-solvated/envi.str -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems/charmm-solvated copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/charmm-solvated/isa_wat.3_kcl.m14.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems/charmm-solvated copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/charmm-solvated/m14.rtf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems/charmm-solvated copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/4TVP-dmj_wat-ion.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/improper.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/ala3_solv_drude.crd -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/1T2Y.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/ala_ala_ala.crd -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/par_all36_prot.prm -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/test_amber_ff.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/T4-lysozyme-L99A-p-xylene-implicit.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/implicit.top -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/2ci2.pdb.gro -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/alanine-dipeptide-implicit.inpcrd -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/toppar_water_ions.str -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/ions.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/toppar_drude_nucleic_acid_2017b.str -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/bpti.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/insertions.pdbx -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/lysozyme-implicit-forces.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/ala3_solv.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/peptide_with_tip4p.prmtop -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/ff14ipq.rst7 -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/alanine-dipeptide-amoeba-forces.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/MoS2.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/chl1.crd -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/glycopeptide.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems/ala-ala-ala-implicit-forces copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/ala-ala-ala-implicit-forces/GBn2_NoCutoff.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems/ala-ala-ala-implicit-forces copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/ala-ala-ala-implicit-forces/OBC2_NonPeriodic_Salt.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems/ala-ala-ala-implicit-forces copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/ala-ala-ala-implicit-forces/HCT_NoCutoff.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems/ala-ala-ala-implicit-forces copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/ala-ala-ala-implicit-forces/GBn_NoCutoff_Salt.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems/ala-ala-ala-implicit-forces copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/ala-ala-ala-implicit-forces/OBC1_NonPeriodic.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems/ala-ala-ala-implicit-forces copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/ionic.top -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems/alanine-dipeptide-implicit-forces copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/alanine-dipeptide-implicit-forces/GBn2_NoCutoff.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems/alanine-dipeptide-implicit-forces copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/alanine-dipeptide-implicit-forces/OBC2_NonPeriodic_Salt.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems/alanine-dipeptide-implicit-forces copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/alanine-dipeptide-implicit-forces/HCT_NoCutoff.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems/alanine-dipeptide-implicit-forces copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/alanine-dipeptide-implicit-forces/GBn_NoCutoff_Salt.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems/alanine-dipeptide-implicit-forces copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/alanine-dipeptide-implicit-forces/OBC1_NonPeriodic.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems/alanine-dipeptide-implicit-forces copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/cyt-gua-cyt.crd -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/ff14ipq.parm7 -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/amber.ncrst -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/methanol-box.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/ala_ala_ala_drude.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/par_all22_prot.inp -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/cyt-gua-cyt.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/methanol_ions.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/ala_ala_ala.vpsf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/tz2.truncoct.parm7 -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/tz2.truncoct.rst7 -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/Mg_water.inpcrd -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/18protein.rst7 -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/gaffwat.parm7 -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/alanine-dipeptide-explicit.inpcrd -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.12/build/systems/MoS2.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/systems byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/simtk/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/simtk/unit/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/simtk/openmm/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/simtk/openmm/app/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/__init__.py to __init__.cpython-312.pyc /usr/lib/python3.12/dist-packages/openmm/__init__.py:16: SyntaxWarning: invalid escape sequence '\p' byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/unit.py to unit.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/constants.py to constants.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/doctests.py to doctests.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/unit_operators.py to unit_operators.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/quantity.py to quantity.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/standard_dimensions.py to standard_dimensions.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/basedimension.py to basedimension.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/mymatrix.py to mymatrix.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/unit_definitions.py to unit_definitions.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/unit_math.py to unit_math.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/prefix.py to prefix.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/unit/baseunit.py to baseunit.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/amd.py to amd.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/xtcfile.py to xtcfile.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/statedatareporter.py to statedatareporter.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/singleton.py to singleton.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/charmm/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/charmm/_charmmfile.py to _charmmfile.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/charmm/topologyobjects.py to topologyobjects.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/charmm/exceptions.py to exceptions.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/amber_file_parser.py to amber_file_parser.cpython-312.pyc /usr/lib/python3.12/dist-packages/openmm/app/internal/amber_file_parser.py:65: SyntaxWarning: invalid escape sequence '\(' byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbstructure.py to pdbstructure.cpython-312.pyc /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbstructure.py:1071: SyntaxWarning: invalid escape sequence '\.' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbstructure.py:1082: SyntaxWarning: invalid escape sequence '\.' byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxContainers.py to PdbxContainers.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxReader.py to PdbxReader.cpython-312.pyc /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxReader.py:347: SyntaxWarning: invalid escape sequence '\S' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxReader.py:349: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxReader.py:350: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxReader.py:352: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxReader.py:354: SyntaxWarning: invalid escape sequence '\S' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxReader.py:419: SyntaxWarning: invalid escape sequence '\S' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxReader.py:421: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxReader.py:423: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxReader.py:425: SyntaxWarning: invalid escape sequence '\S' byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxParser.py to PdbxParser.cpython-312.pyc /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxParser.py:358: SyntaxWarning: invalid escape sequence '\S' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxParser.py:360: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxParser.py:361: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxParser.py:363: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxParser.py:365: SyntaxWarning: invalid escape sequence '\S' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxParser.py:416: SyntaxWarning: invalid escape sequence '\S' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxParser.py:444: SyntaxWarning: invalid escape sequence '\S' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxParser.py:446: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxParser.py:448: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxParser.py:450: SyntaxWarning: invalid escape sequence '\S' byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxReaderTests.py to PdbxReaderTests.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/reader/PdbxReadWriteTests.py to PdbxReadWriteTests.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/writer/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/writer/PdbxWriterTests.py to PdbxWriterTests.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/pdbx/writer/PdbxWriter.py to PdbxWriter.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/unitcell.py to unitcell.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/customgbforces.py to customgbforces.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/internal/argtracker.py to argtracker.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/xtcreporter.py to xtcreporter.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/topology.py to topology.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/pdbfile.py to pdbfile.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/amberprmtopfile.py to amberprmtopfile.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/metadynamics.py to metadynamics.cpython-312.pyc /usr/lib/python3.12/dist-packages/openmm/app/metadynamics.py:247: SyntaxWarning: invalid escape sequence '\.' byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/charmmpsffile.py to charmmpsffile.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/modeller.py to modeller.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/pdbreporter.py to pdbreporter.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/element.py to element.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/simulatedtempering.py to simulatedtempering.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/desmonddmsfile.py to desmonddmsfile.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/amberinpcrdfile.py to amberinpcrdfile.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/pdbxfile.py to pdbxfile.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/charmmcrdfiles.py to charmmcrdfiles.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/dcdreporter.py to dcdreporter.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/checkpointreporter.py to checkpointreporter.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/dcdfile.py to dcdfile.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/gromacsgrofile.py to gromacsgrofile.cpython-312.pyc /usr/lib/python3.12/dist-packages/openmm/app/gromacsgrofile.py:62: SyntaxWarning: invalid escape sequence '\.' byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/charmmparameterset.py to charmmparameterset.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/simulation.py to simulation.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/gromacstopfile.py to gromacstopfile.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/app/forcefield.py to forcefield.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/openmm.py to openmm.cpython-312.pyc /usr/lib/python3.12/dist-packages/openmm/openmm.py:19157: SyntaxWarning: invalid escape sequence '\S' byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/version.py to version.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/vec3.py to vec3.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/mtsintegrator.py to mtsintegrator.cpython-312.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/openmm/testInstallation.py to testInstallation.cpython-312.pyc running install_egg_info running egg_info creating OpenMM.egg-info writing OpenMM.egg-info/PKG-INFO writing dependency_links to OpenMM.egg-info/dependency_links.txt writing top-level names to OpenMM.egg-info/top_level.txt writing manifest file 'OpenMM.egg-info/SOURCES.txt' dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative reading manifest file 'OpenMM.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching '*.txt' warning: no files found matching 'README' anywhere in distribution warning: no files found matching '*.txt' under directory 'simtk' warning: no files found matching '*.txt' under directory 'openmm' warning: no files found matching '*.so' under directory 'openmm' warning: no files found matching '*.dll' under directory 'openmm' warning: no files found matching '*.lib' under directory 'openmm' warning: no files found matching '*.dylib' under directory 'openmm' warning: no files found matching '*.txt' under directory 'src' warning: no files found matching '*.c' under directory 'src' warning: no files found matching 'Doxyfile' under directory 'src' no previously-included directories found matching 'src/swig_doxygen/doxygen/html' no previously-included directories found matching 'src/swig_doxygen/doxygen/xml' warning: no previously-included files matching 'CMakeLists.txt' found anywhere in distribution writing manifest file 'OpenMM.egg-info/SOURCES.txt' Copying OpenMM.egg-info to /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.12/dist-packages/OpenMM-8.1.1.egg-info Skipping SOURCES.txt running install_scripts I: pybuild base:311: /usr/bin/python3 setup.py install --root /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp author Peter Eastman data_files [] description Python wrapper for OpenMM (a C++ MD package) download_url https://openmm.org ext_modules[, , ] license Python Software Foundation License (BSD-like) long_descriptionOpenMM is a toolkit for molecular simulation. It can be used either as a stand-alone application for running simulations, or as a library you call from your own code. It provides a combination of extreme flexibility (through custom forces and integrators), openness, and high performance (especially on recent GPUs) that make it truly unique among simulation codes. name OpenMM package_data{'openmm': [], 'openmm.app': ['data/*.xml', 'data/*.pdb', 'data/amber14/*.xml', 'data/charmm36/*.xml', 'data/implicit/*.xml'], 'openmm.app.internal': []} packages['simtk', 'simtk.unit', 'simtk.openmm', 'simtk.openmm.app', 'openmm', 'openmm.unit', 'openmm', 'openmm.app', 'openmm.app.internal', 'openmm.app.internal.charmm', 'openmm.app.internal.pdbx', 'openmm.app.internal.pdbx.reader', 'openmm.app.internal.pdbx.writer'] platforms ['Linux', 'Mac OS X', 'Windows'] url https://openmm.org version 8.1.1 running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running build running build_py copying openmm/version.py -> /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm running build_ext running install_lib creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11 creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/simtk copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/simtk/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/simtk creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/simtk/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/simtk/unit/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/simtk/unit creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/simtk/openmm copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/simtk/openmm/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/simtk/openmm creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/simtk/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/simtk/openmm/app/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/simtk/openmm/app creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit/unit.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit/constants.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit/doctests.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit/unit_operators.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit/quantity.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit/standard_dimensions.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit/basedimension.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit/__pycache__/prefix.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit/__pycache__/mymatrix.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit/__pycache__/unit_operators.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit/__pycache__/__init__.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit/__pycache__/quantity.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit/__pycache__/unit_definitions.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit/__pycache__/constants.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit/__pycache__/basedimension.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit/__pycache__/unit_math.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit/__pycache__/unit.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit/__pycache__/standard_dimensions.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit/__pycache__/baseunit.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit/mymatrix.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit/unit_definitions.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit/unit_math.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit/prefix.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/unit/baseunit.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/amd.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/xtcfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/statedatareporter.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/singleton.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/charmm copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/charmm/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/charmm copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/charmm/_charmmfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/charmm copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/charmm/topologyobjects.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/charmm creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/charmm/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/charmm/__pycache__/topologyobjects.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/charmm/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/charmm/__pycache__/__init__.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/charmm/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/charmm/__pycache__/exceptions.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/charmm/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/charmm/__pycache__/_charmmfile.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/charmm/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/charmm/exceptions.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/charmm copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/amber_file_parser.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbstructure.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/reader copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx/reader/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/reader copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx/reader/PdbxContainers.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/reader copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx/reader/PdbxReader.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/reader copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx/reader/PdbxParser.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/reader copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx/reader/PdbxReaderTests.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/reader creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/reader/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx/reader/__pycache__/__init__.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/reader/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx/reader/__pycache__/PdbxContainers.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/reader/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx/reader/__pycache__/PdbxReader.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/reader/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx/reader/PdbxReadWriteTests.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/reader creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/writer copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx/writer/__init__.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/writer copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx/writer/PdbxWriterTests.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/writer copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx/writer/PdbxWriter.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/writer creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/pdbx/__pycache__/__init__.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/compiled.cpython-311-x86_64-linux-gnu.so -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/xtc_utils.cpython-311-x86_64-linux-gnu.so -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/unitcell.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/__pycache__/amber_file_parser.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/__pycache__/argtracker.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/__pycache__/__init__.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/__pycache__/customgbforces.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/__pycache__/pdbstructure.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/__pycache__/singleton.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/__pycache__/unitcell.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/customgbforces.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/internal/argtracker.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/xtcreporter.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/topology.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/pdbfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/amberprmtopfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/metadynamics.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/charmmpsffile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/modeller.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/pdbreporter.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/element.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/simulatedtempering.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/desmonddmsfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/amberinpcrdfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/pdbxfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/charmmcrdfiles.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/__pycache__/metadynamics.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/__pycache__/xtcreporter.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/__pycache__/simulatedtempering.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/__pycache__/gromacstopfile.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/__pycache__/element.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/__pycache__/charmmparameterset.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/__pycache__/gromacsgrofile.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/__pycache__/pdbreporter.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/__pycache__/amberinpcrdfile.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/__pycache__/__init__.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/__pycache__/pdbxfile.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/__pycache__/simulation.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/__pycache__/pdbfile.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/__pycache__/xtcfile.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/__pycache__/dcdfile.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/__pycache__/topology.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/__pycache__/checkpointreporter.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/__pycache__/desmonddmsfile.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/__pycache__/forcefield.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/__pycache__/charmmcrdfiles.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/__pycache__/modeller.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/__pycache__/dcdreporter.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/__pycache__/amberprmtopfile.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/__pycache__/statedatareporter.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/__pycache__/charmmpsffile.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__pycache__ creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/implicit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/implicit/obc2.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/implicit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/implicit/gbn2.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/implicit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/implicit/gbn.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/implicit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/implicit/obc1.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/implicit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/implicit/hct.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/implicit copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber96_obc.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/absinth.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber96.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/tip4pfb.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber03_obc.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/DMPC.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber99sbnmr.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/opc.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/swm4ndp.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/tip5p.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/DPPC.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/charmm36.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/POPE.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/charmm36/tip3p-pme-b.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/charmm36/tip3p-pme-f.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/charmm36/water.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/charmm36/tip5p.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/charmm36/tip4pew.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/charmm36/spce.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/charmm36/tip5pew.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/charmm36/tip4p2005.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/charmm36 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amoeba2013.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14/lipid17.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14/tip4pfb.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14/protein.ff15ipq.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14/opc.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14/DNA.bsc1.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14/DNA.OL15.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14/tip4pew.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14/spce.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14/RNA.OL3.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14/tip3pfb.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14/tip3p.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14/opc3.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14/protein.ff14SB.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14/GLYCAM_06j-1.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data/amber14 copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/glycam-hydrogens.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/tip5p.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber99Test.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amoeba2009.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber99_obc.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/POPC.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amberfb15.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/tip4pew.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/spce.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/tip3p.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/pdbNames.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/iamoeba.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/swm4ndp.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber99sb.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber14-all.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber10.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/tip3pfb.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/spce.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/residues.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/tip3p.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/charmm_polar_2013.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber99sbildn.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/DLPE.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/opc3.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/hydrogens.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber10_obc.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/tip4pew.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/charmm_polar_2019.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/DOPC.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amoeba2018.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/test.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amoeba2018_gk.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/DLPC.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amoeba2009_gk.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amoeba2013_gk.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/data/amber03.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/data copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/dcdreporter.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/checkpointreporter.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/dcdfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/gromacsgrofile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/charmmparameterset.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/simulation.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/gromacstopfile.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/app/forcefield.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/_openmm.cpython-311-x86_64-linux-gnu.so -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/openmm.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/__pycache__/amd.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/__pycache__/mtsintegrator.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/__pycache__/vec3.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/__pycache__/__init__.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/__pycache__/openmm.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/__pycache__/version.cpython-311.pyc -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/__pycache__ copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/version.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/vec3.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/mtsintegrator.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/openmm/testInstallation.py -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/triclinic.pdbx -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/gpcr.cif -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/water_methanol.prm -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/amoeba-ion-in-water.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/MoS2.prm -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/5dhfr_cube.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/bnz.gro -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/explicit.top -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/aidilnaaaaa.gro -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/water-box-216.prmtop -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/bcd-nabumetone_lig.dms -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/ff_with_includes.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/impropers_ordering_tetrapeptide.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/1ppt.top -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/alanine-dipeptide-implicit.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/ala3_solv.parm7 -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/2ci2.pdb.top -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/par_all36_lipid.prm -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/crdsonly.rst7 -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/aidilnaaaaa.top -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/DNA_mbondi3.prmtop -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/top_all36_cgenff.rtf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/water_methanol.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/nacl-water.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/tip5p.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/altlocs2.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/bcd-nabumetone_rcpt.dms -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/ala_ala_ala.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/alanine-dipeptide-implicit.prmtop -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/par_all36_cgenff.prm -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/peptide_with_tip4p.inpcrd -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/alanine-dipeptide-explicit.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/multichain.pdbx -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/DNA_mbondi3.inpcrd -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/5dhfr_cube.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/ions.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/triclinic.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/chlb_cgenff.crd -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/formaldehyde.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/nucleic.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/alanine-dipeptide-explicit-amber99SBILDN-tip3p.dms -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/chl1.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/toppar_drude_master_protein_2013e.str -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/charmm22.par -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/crds_vels_box.rst7 -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/tip4pew.top -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/toppar_all36_lipid_cholesterol.str -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/ala_ala_ala.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/ionic.gro -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/bnz.top -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/par_all22_prot_with_mass.inp -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/1ppt.gro -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/charmm22.rtf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/Mg_water.prmtop -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/crds_box.rst7 -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/18protein.parm7 -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/ala3_solv_drude.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/alanine-dipeptide-explicit.prmtop -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/crds_vels.rst7 -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/lysozyme-implicit.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/altlocs.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/opcbox.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/opc3box.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/triclinic.gro -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/chlb_cgenff.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/ala3_solv.crd -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/ala_ala_ala.xpsf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/methanol_ions.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems/charmm-solvated copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/charmm-solvated/m14.prm -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems/charmm-solvated copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/charmm-solvated/envi.str -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems/charmm-solvated copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/charmm-solvated/isa_wat.3_kcl.m14.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems/charmm-solvated copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/charmm-solvated/m14.rtf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems/charmm-solvated copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/4TVP-dmj_wat-ion.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/improper.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/ala3_solv_drude.crd -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/1T2Y.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/ala_ala_ala.crd -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/par_all36_prot.prm -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/test_amber_ff.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/T4-lysozyme-L99A-p-xylene-implicit.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/implicit.top -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/2ci2.pdb.gro -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/alanine-dipeptide-implicit.inpcrd -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/toppar_water_ions.str -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/ions.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/toppar_drude_nucleic_acid_2017b.str -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/bpti.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/insertions.pdbx -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/lysozyme-implicit-forces.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/ala3_solv.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/peptide_with_tip4p.prmtop -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/ff14ipq.rst7 -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/alanine-dipeptide-amoeba-forces.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/MoS2.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/chl1.crd -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/glycopeptide.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems/ala-ala-ala-implicit-forces copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/ala-ala-ala-implicit-forces/GBn2_NoCutoff.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems/ala-ala-ala-implicit-forces copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/ala-ala-ala-implicit-forces/OBC2_NonPeriodic_Salt.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems/ala-ala-ala-implicit-forces copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/ala-ala-ala-implicit-forces/HCT_NoCutoff.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems/ala-ala-ala-implicit-forces copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/ala-ala-ala-implicit-forces/GBn_NoCutoff_Salt.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems/ala-ala-ala-implicit-forces copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/ala-ala-ala-implicit-forces/OBC1_NonPeriodic.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems/ala-ala-ala-implicit-forces copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/ionic.top -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems creating /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems/alanine-dipeptide-implicit-forces copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/alanine-dipeptide-implicit-forces/GBn2_NoCutoff.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems/alanine-dipeptide-implicit-forces copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/alanine-dipeptide-implicit-forces/OBC2_NonPeriodic_Salt.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems/alanine-dipeptide-implicit-forces copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/alanine-dipeptide-implicit-forces/HCT_NoCutoff.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems/alanine-dipeptide-implicit-forces copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/alanine-dipeptide-implicit-forces/GBn_NoCutoff_Salt.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems/alanine-dipeptide-implicit-forces copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/alanine-dipeptide-implicit-forces/OBC1_NonPeriodic.xml -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems/alanine-dipeptide-implicit-forces copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/cyt-gua-cyt.crd -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/ff14ipq.parm7 -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/amber.ncrst -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/methanol-box.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/ala_ala_ala_drude.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/par_all22_prot.inp -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/cyt-gua-cyt.psf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/methanol_ions.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/ala_ala_ala.vpsf -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/tz2.truncoct.parm7 -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/tz2.truncoct.rst7 -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/Mg_water.inpcrd -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/18protein.rst7 -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/gaffwat.parm7 -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/alanine-dipeptide-explicit.inpcrd -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems copying /build/reproducible-path/openmm-8.1.1+dfsg/.pybuild/cpython3_3.11/build/systems/MoS2.pdb -> /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/systems byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/simtk/__init__.py to __init__.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/simtk/unit/__init__.py to __init__.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/simtk/openmm/__init__.py to __init__.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/simtk/openmm/app/__init__.py to __init__.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/__init__.py to __init__.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit/__init__.py to __init__.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit/unit.py to unit.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit/constants.py to constants.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit/doctests.py to doctests.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit/unit_operators.py to unit_operators.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit/quantity.py to quantity.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit/standard_dimensions.py to standard_dimensions.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit/basedimension.py to basedimension.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit/mymatrix.py to mymatrix.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit/unit_definitions.py to unit_definitions.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit/unit_math.py to unit_math.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit/prefix.py to prefix.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/unit/baseunit.py to baseunit.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/amd.py to amd.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/__init__.py to __init__.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/xtcfile.py to xtcfile.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/statedatareporter.py to statedatareporter.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/__init__.py to __init__.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/singleton.py to singleton.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/charmm/__init__.py to __init__.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/charmm/_charmmfile.py to _charmmfile.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/charmm/topologyobjects.py to topologyobjects.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/charmm/exceptions.py to exceptions.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/amber_file_parser.py to amber_file_parser.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbstructure.py to pdbstructure.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/__init__.py to __init__.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/reader/__init__.py to __init__.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/reader/PdbxContainers.py to PdbxContainers.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/reader/PdbxReader.py to PdbxReader.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/reader/PdbxParser.py to PdbxParser.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/reader/PdbxReaderTests.py to PdbxReaderTests.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/reader/PdbxReadWriteTests.py to PdbxReadWriteTests.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/writer/__init__.py to __init__.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/writer/PdbxWriterTests.py to PdbxWriterTests.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/pdbx/writer/PdbxWriter.py to PdbxWriter.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/unitcell.py to unitcell.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/customgbforces.py to customgbforces.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/internal/argtracker.py to argtracker.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/xtcreporter.py to xtcreporter.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/topology.py to topology.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/pdbfile.py to pdbfile.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/amberprmtopfile.py to amberprmtopfile.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/metadynamics.py to metadynamics.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/charmmpsffile.py to charmmpsffile.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/modeller.py to modeller.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/pdbreporter.py to pdbreporter.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/element.py to element.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/simulatedtempering.py to simulatedtempering.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/desmonddmsfile.py to desmonddmsfile.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/amberinpcrdfile.py to amberinpcrdfile.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/pdbxfile.py to pdbxfile.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/charmmcrdfiles.py to charmmcrdfiles.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/dcdreporter.py to dcdreporter.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/checkpointreporter.py to checkpointreporter.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/dcdfile.py to dcdfile.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/gromacsgrofile.py to gromacsgrofile.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/charmmparameterset.py to charmmparameterset.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/simulation.py to simulation.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/gromacstopfile.py to gromacstopfile.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/app/forcefield.py to forcefield.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/openmm.py to openmm.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/version.py to version.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/vec3.py to vec3.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/mtsintegrator.py to mtsintegrator.cpython-311.pyc byte-compiling /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/openmm/testInstallation.py to testInstallation.cpython-311.pyc running install_egg_info running egg_info writing OpenMM.egg-info/PKG-INFO writing dependency_links to OpenMM.egg-info/dependency_links.txt writing top-level names to OpenMM.egg-info/top_level.txt dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative reading manifest file 'OpenMM.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching '*.txt' warning: no files found matching 'README' anywhere in distribution warning: no files found matching '*.txt' under directory 'simtk' warning: no files found matching '*.txt' under directory 'openmm' warning: no files found matching '*.so' under directory 'openmm' warning: no files found matching '*.dll' under directory 'openmm' warning: no files found matching '*.lib' under directory 'openmm' warning: no files found matching '*.dylib' under directory 'openmm' warning: no files found matching '*.txt' under directory 'src' warning: no files found matching '*.c' under directory 'src' warning: no files found matching 'Doxyfile' under directory 'src' no previously-included directories found matching 'src/swig_doxygen/doxygen/html' no previously-included directories found matching 'src/swig_doxygen/doxygen/xml' warning: no previously-included files matching 'CMakeLists.txt' found anywhere in distribution writing manifest file 'OpenMM.egg-info/SOURCES.txt' Copying OpenMM.egg-info to /build/reproducible-path/openmm-8.1.1+dfsg/debian/tmp/usr/lib/python3.11/dist-packages/OpenMM-8.1.1.egg-info Skipping SOURCES.txt running install_scripts make[1]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg' dh_install -O--buildsystem=cmake dh_installdocs -O--buildsystem=cmake dh_installchangelogs -O--buildsystem=cmake debian/rules override_dh_python3 make[1]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg' dh_python3 find debian/python3-openmm -name '*.py' \ | xargs sed -i 's/^#!\/bin\/env python/#!\/usr\/bin\/python3/' find debian/python3-openmm -name __pycache__ \ | xargs rm -rf find debian/python3-openmm -name '_openmm.*.so' \ | xargs chrpath --replace /usr/lib/x86_64-linux-gnu/openmm debian/python3-openmm/usr/lib/python3/dist-packages/openmm/_openmm.cpython-311-x86_64-linux-gnu.so: RUNPATH=/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu debian/python3-openmm/usr/lib/python3/dist-packages/openmm/_openmm.cpython-311-x86_64-linux-gnu.so: new RUNPATH: /usr/lib/x86_64-linux-gnu/openmm debian/python3-openmm/usr/lib/python3/dist-packages/openmm/_openmm.cpython-312-x86_64-linux-gnu.so: RUNPATH=/build/reproducible-path/openmm-8.1.1+dfsg/obj-x86_64-linux-gnu debian/python3-openmm/usr/lib/python3/dist-packages/openmm/_openmm.cpython-312-x86_64-linux-gnu.so: new RUNPATH: /usr/lib/x86_64-linux-gnu/openmm make[1]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg' dh_installsystemduser -O--buildsystem=cmake dh_perl -O--buildsystem=cmake dh_link -O--buildsystem=cmake dh_strip_nondeterminism -O--buildsystem=cmake dh_compress -O--buildsystem=cmake dh_fixperms -O--buildsystem=cmake dh_missing -O--buildsystem=cmake dh_dwz -a -O--buildsystem=cmake dh_strip -a -O--buildsystem=cmake dh_makeshlibs -a -O--buildsystem=cmake debian/rules override_dh_shlibdeps make[1]: Entering directory '/build/reproducible-path/openmm-8.1.1+dfsg' dh_shlibdeps --dpkg-shlibdeps-params=--ignore-missing-info dpkg-shlibdeps: warning: cannot find library libOpenMMOpenCL.so needed by debian/libopenmm-plugins/usr/lib/x86_64-linux-gnu/openmm/plugins/libOpenMMRPMDOpenCL.so (ELF format: 'elf64-x86-64' abi: 'ELF:64:l:amd64:0'; RPATH: '') dpkg-shlibdeps: warning: cannot find library libOpenMMAmoeba.so needed by debian/python3-openmm/usr/lib/python3/dist-packages/openmm/_openmm.cpython-311-x86_64-linux-gnu.so (ELF format: 'elf64-x86-64' abi: 'ELF:64:l:amd64:0'; RPATH: '/usr/lib/x86_64-linux-gnu/openmm') dpkg-shlibdeps: warning: cannot find library libOpenMMRPMD.so needed by debian/python3-openmm/usr/lib/python3/dist-packages/openmm/_openmm.cpython-311-x86_64-linux-gnu.so (ELF format: 'elf64-x86-64' abi: 'ELF:64:l:amd64:0'; RPATH: '/usr/lib/x86_64-linux-gnu/openmm') dpkg-shlibdeps: warning: cannot find library libOpenMMDrude.so needed by debian/python3-openmm/usr/lib/python3/dist-packages/openmm/_openmm.cpython-311-x86_64-linux-gnu.so (ELF format: 'elf64-x86-64' abi: 'ELF:64:l:amd64:0'; RPATH: '/usr/lib/x86_64-linux-gnu/openmm') dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib64/ld-linux-x86-64.so.2 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib64/ld-linux-x86-64.so.2.usr-is-merged dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib64/ld-linux-x86-64.so.2 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib64/ld-linux-x86-64.so.2.usr-is-merged dpkg-shlibdeps: warning: cannot find library libOpenMMAmoeba.so needed by debian/libopenmm-plugins/usr/lib/x86_64-linux-gnu/openmm/plugins/libOpenMMAmoebaReference.so (ELF format: 'elf64-x86-64' abi: 'ELF:64:l:amd64:0'; RPATH: '') dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib64/ld-linux-x86-64.so.2 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib64/ld-linux-x86-64.so.2.usr-is-merged dpkg-shlibdeps: warning: cannot find library libOpenMMAmoeba.so needed by debian/python3-openmm/usr/lib/python3/dist-packages/openmm/_openmm.cpython-312-x86_64-linux-gnu.so (ELF format: 'elf64-x86-64' abi: 'ELF:64:l:amd64:0'; RPATH: '/usr/lib/x86_64-linux-gnu/openmm') dpkg-shlibdeps: warning: cannot find library libOpenMMRPMD.so needed by debian/python3-openmm/usr/lib/python3/dist-packages/openmm/_openmm.cpython-312-x86_64-linux-gnu.so (ELF format: 'elf64-x86-64' abi: 'ELF:64:l:amd64:0'; RPATH: '/usr/lib/x86_64-linux-gnu/openmm') dpkg-shlibdeps: warning: cannot find library libOpenMMDrude.so needed by debian/python3-openmm/usr/lib/python3/dist-packages/openmm/_openmm.cpython-312-x86_64-linux-gnu.so (ELF format: 'elf64-x86-64' abi: 'ELF:64:l:amd64:0'; RPATH: '/usr/lib/x86_64-linux-gnu/openmm') dpkg-shlibdeps: warning: cannot find library libOpenMMDrude.so needed by debian/libopenmm-plugins/usr/lib/x86_64-linux-gnu/openmm/plugins/libOpenMMDrudeReference.so (ELF format: 'elf64-x86-64' abi: 'ELF:64:l:amd64:0'; RPATH: '') dpkg-shlibdeps: warning: cannot find library libOpenMMOpenCL.so needed by debian/libopenmm-plugins/usr/lib/x86_64-linux-gnu/openmm/plugins/libOpenMMDrudeOpenCL.so (ELF format: 'elf64-x86-64' abi: 'ELF:64:l:amd64:0'; RPATH: '') dpkg-shlibdeps: warning: cannot find library libOpenMMDrude.so needed by debian/libopenmm-plugins/usr/lib/x86_64-linux-gnu/openmm/plugins/libOpenMMDrudeOpenCL.so (ELF format: 'elf64-x86-64' abi: 'ELF:64:l:amd64:0'; RPATH: '') dpkg-shlibdeps: warning: cannot find library libOpenMMOpenCL.so needed by debian/libopenmm-plugins/usr/lib/x86_64-linux-gnu/openmm/plugins/libOpenMMAmoebaOpenCL.so (ELF format: 'elf64-x86-64' abi: 'ELF:64:l:amd64:0'; RPATH: '') dpkg-shlibdeps: warning: cannot find library libOpenMMAmoeba.so needed by debian/libopenmm-plugins/usr/lib/x86_64-linux-gnu/openmm/plugins/libOpenMMAmoebaOpenCL.so (ELF format: 'elf64-x86-64' abi: 'ELF:64:l:amd64:0'; RPATH: '') make[1]: Leaving directory '/build/reproducible-path/openmm-8.1.1+dfsg' dh_installdeb -O--buildsystem=cmake dh_numpy3 -O--buildsystem=cmake dh_gencontrol -O--buildsystem=cmake dpkg-gencontrol: warning: package libopenmm-dev: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: Provides field of package python3-openmm: substitution variable ${python3:Provides} used, but is not defined dpkg-gencontrol: warning: package libopenmm-plugins: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package libopenmm8.1: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package libopenmm-dev: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: Provides field of package python3-openmm: substitution variable ${python3:Provides} used, but is not defined dpkg-gencontrol: warning: package libopenmm-plugins: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package libopenmm8.1: substitution variable ${python3:Depends} unused, but is defined dh_md5sums -O--buildsystem=cmake dh_builddeb -O--buildsystem=cmake dpkg-deb: building package 'libopenmm-dev-dbgsym' in '../libopenmm-dev-dbgsym_8.1.1+dfsg-1_amd64.deb'. dpkg-deb: building package 'libopenmm-dev' in '../libopenmm-dev_8.1.1+dfsg-1_amd64.deb'. dpkg-deb: building package 'libopenmm8.1' in '../libopenmm8.1_8.1.1+dfsg-1_amd64.deb'. dpkg-deb: building package 'libopenmm8.1-dbgsym' in '../libopenmm8.1-dbgsym_8.1.1+dfsg-1_amd64.deb'. dpkg-deb: building package 'libopenmm-plugins-dbgsym' in '../libopenmm-plugins-dbgsym_8.1.1+dfsg-1_amd64.deb'. dpkg-deb: building package 'libopenmm-plugins' in '../libopenmm-plugins_8.1.1+dfsg-1_amd64.deb'. dpkg-deb: building package 'python3-openmm-dbgsym' in '../python3-openmm-dbgsym_8.1.1+dfsg-1_amd64.deb'. dpkg-deb: building package 'python3-openmm' in '../python3-openmm_8.1.1+dfsg-1_amd64.deb'. dpkg-genbuildinfo --build=binary -O../openmm_8.1.1+dfsg-1_amd64.buildinfo dpkg-genchanges --build=binary -O../openmm_8.1.1+dfsg-1_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/2026589 and its subdirectories I: Current time: Thu Jun 6 06:31:25 -12 2024 I: pbuilder-time-stamp: 1717698685 Thu Jun 6 18:31:28 UTC 2024 I: diffoscope 270 will be used to compare the two builds: Running as unit: rb-diffoscope-amd64_31-9504.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.voPpt5q6/openmm_8.1.1+dfsg-1.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.voPpt5q6/openmm_8.1.1+dfsg-1.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.voPpt5q6/openmm_8.1.1+dfsg-1.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.voPpt5q6/b1/openmm_8.1.1+dfsg-1_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.voPpt5q6/b2/openmm_8.1.1+dfsg-1_amd64.changes ## close_archive (total time: 0.001s) 0.000s 40 calls diffoscope.comparators.xz.XzContainer 0.000s 20 calls diffoscope.comparators.deb.DebContainer 0.000s 24 calls diffoscope.comparators.tar.TarContainer 0.000s 16 calls diffoscope.comparators.deb.DebTarContainer ## command (total time: 1003.132s) 481.008s 6504 calls readelf 425.230s 722 calls diff 72.079s 1260 calls objdump 11.287s 40 calls xz 10.438s 12 calls objcopy 2.903s 143 calls strings 0.091s 13 calls cmp 0.091s 13 calls cmp (external) 0.004s 34 calls cmp (internal) ## compare_files (cumulative) (total time: 3408.480s) 638.683s 1 call abc.DotChangesFile 638.473s 2 calls abc.DebFile 638.306s 4 calls abc.XzFile 634.590s 2 calls abc.DebDataTarFile 631.079s 13 calls abc.ElfFile 211.921s 60 calls diffoscope.comparators.elf.ElfCodeSection 12.170s 219 calls diffoscope.comparators.elf.ElfSection 1.594s 2 calls abc.TextFile 1.452s 19 calls diffoscope.comparators.elf.ElfStringSection 0.096s 2 calls abc.TarFile 0.091s 6 calls diffoscope.comparators.elf.MonkeyPatchedElfSection 0.025s 2 calls abc.Md5sumsFile ## container_extract (total time: 12.633s) 11.290s 40 calls diffoscope.comparators.xz.XzContainer 0.953s 588 calls diffoscope.comparators.deb.DebTarContainer 0.367s 44 calls diffoscope.comparators.deb.DebContainer 0.023s 32 calls diffoscope.comparators.tar.TarContainer ## diff (total time: 18.014s) 18.014s 2927 calls linediff ## has_same_content_as (total time: 0.102s) 0.077s 8 calls abc.DebFile 0.020s 13 calls abc.ElfFile 0.002s 219 calls diffoscope.comparators.elf.ElfSection 0.001s 7 calls abc.TextFile 0.001s 4 calls abc.Md5sumsFile 0.001s 60 calls diffoscope.comparators.elf.ElfCodeSection 0.000s 2 calls abc.DebDataTarFile 0.000s 4 calls abc.XzFile 0.000s 2 calls abc.TarFile 0.000s 1 call abc.DotChangesFile 0.000s 1 call diffoscope.comparators.utils.libarchive.LibarchiveSymlink 0.000s 19 calls diffoscope.comparators.elf.ElfStringSection 0.000s 6 calls diffoscope.comparators.elf.MonkeyPatchedElfSection ## main (total time: 719.771s) 719.769s 2 calls outputs 0.002s 1 call cleanup ## open_archive (total time: 0.001s) 0.000s 40 calls diffoscope.comparators.xz.XzContainer 0.000s 24 calls diffoscope.comparators.tar.TarContainer 0.000s 20 calls diffoscope.comparators.deb.DebContainer 0.000s 16 calls diffoscope.comparators.deb.DebTarContainer ## output (total time: 80.081s) 55.543s 1 call html 15.107s 1 call text 9.431s 1 call json ## recognizes (total time: 9.845s) 7.847s 1600 calls diffoscope.comparators.utils.archive.ArchiveMember 1.141s 4372 calls diffoscope.comparators.utils.libarchive.LibarchiveMember 0.640s 12 calls diffoscope.comparators.binary.FilesystemFile 0.218s 864 calls diffoscope.comparators.debian.DebControlMember ## specialize (total time: 0.368s) 0.368s 346 calls specialize Finished with result: success Main processes terminated with: code=exited/status=1 Service runtime: 12min 161ms CPU time consumed: 14min 39.206s Thu Jun 6 18:43:34 UTC 2024 W: Diffoscope claims the build is reproducible, but there is a diffoscope file. Please investigate. Thu Jun 6 18:43:34 UTC 2024 E: openmm failed to build reproducibly in unstable on amd64. Thu Jun 6 18:49:16 UTC 2024 I: Submitting .buildinfo files to external archives: Thu Jun 6 18:49:16 UTC 2024 I: Submitting 12K b1/openmm_8.1.1+dfsg-1_amd64.buildinfo.asc Thu Jun 6 18:49:18 UTC 2024 I: Submitting 12K b2/openmm_8.1.1+dfsg-1_amd64.buildinfo.asc Thu Jun 6 18:49:19 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Thu Jun 6 18:49:19 UTC 2024 I: Done submitting .buildinfo files. Thu Jun 6 18:49:19 UTC 2024 I: Removing signed openmm_8.1.1+dfsg-1_amd64.buildinfo.asc files: removed './b1/openmm_8.1.1+dfsg-1_amd64.buildinfo.asc' removed './b2/openmm_8.1.1+dfsg-1_amd64.buildinfo.asc'