Wed Nov 20 01:08:44 UTC 2024 I: starting to build igv/unstable/amd64 on jenkins on '2024-11-20 01:08' Wed Nov 20 01:08:44 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_20/36848/console.log Wed Nov 20 01:08:44 UTC 2024 I: Downloading source for unstable/igv=2.18.5+dfsg-1 --2024-11-20 01:08:44-- http://deb.debian.org/debian/pool/main/i/igv/igv_2.18.5%2bdfsg-1.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2563 (2.5K) [text/prs.lines.tag] Saving to: ‘igv_2.18.5+dfsg-1.dsc’ 0K .. 100% 309M=0s 2024-11-20 01:08:44 (309 MB/s) - ‘igv_2.18.5+dfsg-1.dsc’ saved [2563/2563] Wed Nov 20 01:08:45 UTC 2024 I: igv_2.18.5+dfsg-1.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: igv Binary: igv Architecture: all Version: 2.18.5+dfsg-1 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille , Olivier Sallou , Pierre Gruet Homepage: https://www.broadinstitute.org/igv/ Standards-Version: 4.7.0 Vcs-Browser: https://salsa.debian.org/med-team/igv Vcs-Git: https://salsa.debian.org/med-team/igv.git Build-Depends: debhelper-compat (= 13), default-jdk, gradle-debian-helper, javahelper Build-Depends-Indep: inkscape, libbatik-java, libcommons-io-java, libcommons-lang3-java, libcommons-math3-java, libdsiutils-java, libfastutil-java, libfest-assert-java, libfest-util-java, libfest-reflect-java, libgoogle-gson-java, libguava-java, libhtsjdk-java, libicb-utils-java, libjaxp1.3-java, libjide-oss-java, libjsap-java, liblog4j1.2-java, liblog4j2-java, libnb-absolutelayout-java, libprotobuf-java, libswing-layout-java, libxml-commons-external-java, openjfx, junit4 , junit5 , libcommons-lang-java Package-List: igv deb science optional arch=all Checksums-Sha1: 35f18038baa88d176f2619b748afc5b29d502e22 49116420 igv_2.18.5+dfsg.orig.tar.xz 890d3ff8c5c68ece29de08c129779bd0eacc160e 33408 igv_2.18.5+dfsg-1.debian.tar.xz Checksums-Sha256: a0612f14626dabf668700d48f5abbdd62634499b9b8183cc505c1c38fc32f77e 49116420 igv_2.18.5+dfsg.orig.tar.xz 5a2f7b23e1d34f26b335adcbc8a0ca411703ee4d16d59ae0b5b1bb15fd44a642 33408 igv_2.18.5+dfsg-1.debian.tar.xz Files: b6cba92bcd8e83af1c8891165f6426b5 49116420 igv_2.18.5+dfsg.orig.tar.xz 32337c06c23c93ebe71e72fb1a476fc1 33408 igv_2.18.5+dfsg-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEM8soQxPpC9J9y0UjYAMWptwndHYFAmcMKbsACgkQYAMWptwn dHaJWA//QQ6G37hAqWg0+4TFpvfXKXdegYGuS1lQr7mh5laxcshL0lC+4YAHLbCw EMMPrVkNHgSDhCyt7g23M1B/AdOWGOU4PatqvjYi6+efpJum4YOP+5ZKp/BAb1DT aeju6iZ2mADbmgZHRo3JGjJCZlX0Z1ft8MViVUiXbTTC1Xif++arNsduKdq83XrB 3TAavv0Zdjk8TO1N9kGZOQJhXxisp68WAgxeUdJiE/4Xx/6V7fUQ86Nh7QDofrqA Feu1jA49ldCEhKpl2oSnrmdNEtHUgarFUpAh7eGr/i7hTuAWQZ40r0AVtSnMsdoi aGUwZwunxUuNEO2neCOMNwCLW42h2RX6gP7hUq0E4f8kUbxA07ux72NSOg1XCKMy mFUbHvbfIC7Xh0I+/v96uZG5OPdttlX/VFqy4pKCa85N3lrHAeLatJxlMywfh2Gf xLpmrxufTZMbRPO+tTnKDXI42OLJ3dCMqIFjybG5hOa3AtZR2OgazeiwNrDRSndw rKORi8FD1NR0SZCcj19FerCgldshg+g9GX4UeBzoRJaawqCRQsI+DTnwqFXgjnKe kloLEsO5HHAYRcmWlY6TyIWFVl4mjGeueGePgdXG9wpyvIklrUnjZ3VFR9FQCiZj OfTLQJd+mEawsvzIusNwxUA7y2lwuxxIbsD3CkRseMxxmN8/SLo= =sAyl -----END PGP SIGNATURE----- Wed Nov 20 01:08:45 UTC 2024 I: Checking whether the package is not for us Wed Nov 20 01:08:45 UTC 2024 I: Starting 1st build on remote node ionos15-amd64.debian.net. Wed Nov 20 01:08:45 UTC 2024 I: Preparing to do remote build '1' on ionos15-amd64.debian.net. Wed Nov 20 01:13:52 UTC 2024 I: Deleting $TMPDIR on ionos15-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Mon Dec 22 19:31:48 -12 2025 I: pbuilder-time-stamp: 1766475108 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [igv_2.18.5+dfsg-1.dsc] I: copying [./igv_2.18.5+dfsg.orig.tar.xz] I: copying [./igv_2.18.5+dfsg-1.debian.tar.xz] I: Extracting source gpgv: Signature made Sun Oct 13 20:12:43 2024 gpgv: using RSA key 33CB284313E90BD27DCB4523600316A6DC277476 gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./igv_2.18.5+dfsg-1.dsc: no acceptable signature found dpkg-source: info: extracting igv in igv-2.18.5+dfsg dpkg-source: info: unpacking igv_2.18.5+dfsg.orig.tar.xz dpkg-source: info: unpacking igv_2.18.5+dfsg-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying gradle_dependencies.patch dpkg-source: info: applying skip_tests_network.patch dpkg-source: info: applying using_home_made_icons.patch dpkg-source: info: applying omit_aws_stuff.patch dpkg-source: info: applying wrong_override.patch dpkg-source: info: applying source_target_level.patch dpkg-source: info: applying opening_sealed_interface.patch dpkg-source: info: applying no_spark.patch dpkg-source: info: applying omit_blat_tests.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/2277421/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='3805a623ddb14974977f6ce5b331bc1c' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='2277421' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.1ZJqpUOp/pbuilderrc_WWv8 --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.1ZJqpUOp/b1 --logfile b1/build.log igv_2.18.5+dfsg-1.dsc' SUDO_GID='111' SUDO_UID='106' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://213.165.73.152:3128' I: uname -a Linux ionos15-amd64 6.11.5+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.11.5-1~bpo12+1 (2024-11-11) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin I: user script /srv/workspace/pbuilder/2277421/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), default-jdk, gradle-debian-helper, javahelper, inkscape, libbatik-java, libcommons-io-java, libcommons-lang3-java, libcommons-math3-java, libdsiutils-java, libfastutil-java, libfest-assert-java, libfest-util-java, libfest-reflect-java, libgoogle-gson-java, libguava-java, libhtsjdk-java, libicb-utils-java, libjaxp1.3-java, libjide-oss-java, libjsap-java, liblog4j1.2-java, liblog4j2-java, libnb-absolutelayout-java, libprotobuf-java, libswing-layout-java, libxml-commons-external-java, openjfx, junit4, junit5, libcommons-lang-java dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19966 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on default-jdk; however: Package default-jdk is not installed. pbuilder-satisfydepends-dummy depends on gradle-debian-helper; however: Package gradle-debian-helper is not installed. pbuilder-satisfydepends-dummy depends on javahelper; however: Package javahelper is not installed. pbuilder-satisfydepends-dummy depends on inkscape; however: Package inkscape is not installed. pbuilder-satisfydepends-dummy depends on libbatik-java; however: Package libbatik-java is not installed. pbuilder-satisfydepends-dummy depends on libcommons-io-java; however: Package libcommons-io-java is not installed. pbuilder-satisfydepends-dummy depends on libcommons-lang3-java; however: Package libcommons-lang3-java is not installed. pbuilder-satisfydepends-dummy depends on libcommons-math3-java; however: Package libcommons-math3-java is not installed. pbuilder-satisfydepends-dummy depends on libdsiutils-java; however: Package libdsiutils-java is not installed. pbuilder-satisfydepends-dummy depends on libfastutil-java; however: Package libfastutil-java is not installed. pbuilder-satisfydepends-dummy depends on libfest-assert-java; however: Package libfest-assert-java is not installed. pbuilder-satisfydepends-dummy depends on libfest-util-java; however: Package libfest-util-java is not installed. pbuilder-satisfydepends-dummy depends on libfest-reflect-java; however: Package libfest-reflect-java is not installed. pbuilder-satisfydepends-dummy depends on libgoogle-gson-java; however: Package libgoogle-gson-java is not installed. pbuilder-satisfydepends-dummy depends on libguava-java; however: Package libguava-java is not installed. pbuilder-satisfydepends-dummy depends on libhtsjdk-java; however: Package libhtsjdk-java is not installed. pbuilder-satisfydepends-dummy depends on libicb-utils-java; however: Package libicb-utils-java is not installed. pbuilder-satisfydepends-dummy depends on libjaxp1.3-java; however: Package libjaxp1.3-java is not installed. pbuilder-satisfydepends-dummy depends on libjide-oss-java; however: Package libjide-oss-java is not installed. pbuilder-satisfydepends-dummy depends on libjsap-java; however: Package libjsap-java is not installed. pbuilder-satisfydepends-dummy depends on liblog4j1.2-java; however: Package liblog4j1.2-java is not installed. pbuilder-satisfydepends-dummy depends on liblog4j2-java; however: Package liblog4j2-java is not installed. pbuilder-satisfydepends-dummy depends on libnb-absolutelayout-java; however: Package libnb-absolutelayout-java is not installed. pbuilder-satisfydepends-dummy depends on libprotobuf-java; however: Package libprotobuf-java is not installed. pbuilder-satisfydepends-dummy depends on libswing-layout-java; however: Package libswing-layout-java is not installed. pbuilder-satisfydepends-dummy depends on libxml-commons-external-java; however: Package libxml-commons-external-java is not installed. pbuilder-satisfydepends-dummy depends on openjfx; however: Package openjfx is not installed. pbuilder-satisfydepends-dummy depends on junit4; however: Package junit4 is not installed. pbuilder-satisfydepends-dummy depends on junit5; however: Package junit5 is not installed. pbuilder-satisfydepends-dummy depends on libcommons-lang-java; however: Package libcommons-lang-java is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: adwaita-icon-theme{a} ant{a} ant-optional{a} antlr{a} at-spi2-common{a} autoconf{a} automake{a} autopoint{a} autotools-dev{a} binfmt-support{a} bnd{a} bsdextrautils{a} ca-certificates{a} ca-certificates-java{a} dbus{a} dbus-bin{a} dbus-daemon{a} dbus-session-bus-common{a} dbus-system-bus-common{a} dbus-user-session{a} dconf-gsettings-backend{a} dconf-service{a} dctrl-tools{a} debhelper{a} default-jdk{a} default-jdk-headless{a} default-jre{a} default-jre-headless{a} devscripts{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dictionaries-common{a} dirmngr{a} dwz{a} emacsen-common{a} fastjar{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} gettext{a} gettext-base{a} glib-networking{a} glib-networking-common{a} glib-networking-services{a} gnupg{a} gnupg-l10n{a} gpg{a} gpg-agent{a} gpgconf{a} gpgsm{a} gradle{a} gradle-debian-helper{a} groff-base{a} groovy{a} gsettings-desktop-schemas{a} gtk-update-icon-cache{a} hicolor-icon-theme{a} hunspell-en-us{a} inkscape{a} intltool-debian{a} ivy{a} jarwrapper{a} java-common{a} java-wrappers{a} javahelper{a} junit4{a} junit5{a} lib2geom1.2.0t64{a} libantlr-java{a} libaopalliance-java{a} libapache-pom-java{a} libapiguardian-java{a} libapparmor1{a} libarchive-zip-perl{a} libasm-java{a} libasound2-data{a} libasound2t64{a} libaspell15{a} libassuan9{a} libatinject-jsr330-api-java{a} libatk-bridge2.0-0t64{a} libatk1.0-0t64{a} libatkmm-1.6-1v5{a} libatspi2.0-0t64{a} libavahi-client3{a} libavahi-common-data{a} libavahi-common3{a} libb-hooks-op-check-perl{a} libbatik-java{a} libbcel-java{a} libbcpg-java{a} libbcprov-java{a} libboost-filesystem1.83.0{a} libbrotli1{a} libbsf-java{a} libbsh-java{a} libcairo-gobject2{a} libcairo2{a} libcairomm-1.0-1v5{a} libcdi-api-java{a} libcdr-0.1-1{a} libclass-method-modifiers-perl{a} libclass-xsaccessor-perl{a} libclone-perl{a} libcloudproviders0{a} libcolord2{a} libcolt-free-java{a} libcom-err2{a} libcommons-beanutils-java{a} libcommons-cli-java{a} libcommons-codec-java{a} libcommons-collections3-java{a} libcommons-compress-java{a} libcommons-configuration-java{a} libcommons-io-java{a} libcommons-jexl2-java{a} libcommons-lang-java{a} libcommons-lang3-java{a} libcommons-logging-java{a} libcommons-math3-java{a} libcommons-parent-java{a} libcups2t64{a} libcurl3t64-gnutls{a} libdatrie1{a} libdav1d7{a} libdbus-1-3{a} libdconf1{a} libdd-plist-java{a} libdebhelper-perl{a} libdeflate0{a} libdevel-callchecker-perl{a} libdom4j-java{a} libdouble-conversion3{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm-intel1{a} libdrm-radeon1{a} libdrm2{a} libdsiutils-java{a} libduktape207{a} libdynaloader-functions-perl{a} libeclipse-jdt-annotation-java{a} libedit2{a} libel-api-java{a} libelf1t64{a} libenchant-2-2{a} libencode-locale-perl{a} libepoxy0{a} liberror-prone-java{a} libexpat1{a} libfastutil-java{a} libfelix-framework-java{a} libfelix-gogo-runtime-java{a} libfelix-resolver-java{a} libfest-assert-java{a} libfest-reflect-java{a} libfest-util-java{a} libfile-dirlist-perl{a} libfile-homedir-perl{a} libfile-listing-perl{a} libfile-stripnondeterminism-perl{a} libfile-touch-perl{a} libfile-which-perl{a} libfindbugs-java{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgbm1{a} libgc1{a} libgdk-pixbuf-2.0-0{a} libgdk-pixbuf2.0-common{a} libgeronimo-annotation-1.3-spec-java{a} libgeronimo-interceptor-3.0-spec-java{a} libgif7{a} libgl1{a} libgl1-mesa-dri{a} libglapi-mesa{a} libglib2.0-0t64{a} libglibmm-2.4-1t64{a} libglvnd0{a} libglx-mesa0{a} libglx0{a} libgoogle-gson-java{a} libgpgme11t64{a} libgpgmepp6t64{a} libgradle-core-java{a} libgradle-plugins-java{a} libgraphite2-3{a} libgsl28{a} libgslcblas0{a} libgspell-1-3{a} libgspell-1-common{a} libgssapi-krb5-2{a} libgtk-3-0t64{a} libgtk-3-common{a} libgtk2.0-0t64{a} libgtk2.0-common{a} libgtkmm-3.0-1t64{a} libguava-java{a} libguice-java{a} libhamcrest-java{a} libharfbuzz0b{a} libhawtjni-runtime-java{a} libhtml-parser-perl{a} libhtml-tagset-perl{a} libhtml-tree-perl{a} libhtsjdk-java{a} libhttp-cookies-perl{a} libhttp-date-perl{a} libhttp-message-perl{a} libhttp-negotiate-perl{a} libhttpclient-java{a} libhttpcore-java{a} libhunspell-1.7-0{a} libicb-utils-java{a} libicu4j-java{a} libicu72{a} libimport-into-perl{a} libio-html-perl{a} libio-pty-perl{a} libio-socket-ssl-perl{a} libipc-run-perl{a} libjansi-java{a} libjansi-native-java{a} libjansi1-java{a} libjarjar-java{a} libjatl-java{a} libjavaewah-java{a} libjaxen-java{a} libjaxp1.3-java{a} libjbig0{a} libjcifs-java{a} libjcip-annotations-java{a} libjcommander-java{a} libjetty9-java{a} libjformatstring-java{a} libjgit-java{a} libjide-oss-java{a} libjline2-java{a} libjna-java{a} libjna-jni{a} libjpeg62-turbo{a} libjs-jquery{a} libjsap-java{a} libjsch-java{a} libjsoup-java{a} libjsp-api-java{a} libjsr305-java{a} libjunixsocket-java{a} libjunixsocket-jni{a} libjzlib-java{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libkryo-java{a} libksba8{a} liblcms2-2{a} libldap-2.5-0{a} liblerc4{a} liblightcouch-java{a} libllvm19{a} liblog4j1.2-java{a} liblog4j2-java{a} liblogback-java{a} liblwp-mediatypes-perl{a} liblwp-protocol-https-perl{a} libmagic-mgc{a} libmagic1t64{a} libmaven-parent-java{a} libmaven-resolver-1.6-java{a} libmaven-resolver-java{a} libmaven-shared-utils-java{a} libmaven3-core-java{a} libmbedcrypto16{a} libmbedtls21{a} libmbedx509-7{a} libminlog-java{a} libmjson-java{a} libmodule-runtime-perl{a} libmongodb-java{a} libmoo-perl{a} libnative-platform-java{a} libnative-platform-jni{a} libnb-absolutelayout-java{a} libncbi-ngs3{a} libncbi-vdb3{a} libnekohtml-java{a} libnet-http-perl{a} libnet-ssleay-perl{a} libnghttp2-14{a} libnghttp3-9{a} libngs-java{a} libngs-jni{a} libngtcp2-16{a} libngtcp2-crypto-gnutls8{a} libnpth0t64{a} libnsl2{a} libnspr4{a} libnss3{a} libobjenesis-java{a} libopenjfx-java{a} libopenjfx-jni{a} libopenjp2-7{a} libopentest4j-java{a} libopentest4j-reporting-java{a} libosgi-annotation-java{a} libosgi-compendium-java{a} libosgi-core-java{a} libpam-systemd{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpangomm-1.4-1v5{a} libparams-classify-perl{a} libpciaccess0{a} libpcsclite1{a} libpicocli-java{a} libpipeline1{a} libpixman-1-0{a} libplexus-cipher-java{a} libplexus-classworlds-java{a} libplexus-component-annotations-java{a} libplexus-container-default-java{a} libplexus-interpolation-java{a} libplexus-sec-dispatcher-java{a} libplexus-utils2-java{a} libpng16-16t64{a} libpolyglot-maven-java{a} libpoppler-glib8t64{a} libpoppler140{a} libpotrace0{a} libproc2-0{a} libprotobuf-java{a} libproxy1v5{a} libpsl5t64{a} libpython3-stdlib{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libqdox-java{a} libreadline8t64{a} libreflectasm-java{a} librevenge-0.0-0{a} librhino-java{a} librole-tiny-perl{a} librsvg2-2{a} librsvg2-common{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsensors-config{a} libsensors5{a} libservlet-api-java{a} libsharpyuv0{a} libsimple-http-java{a} libsisu-inject-java{a} libsisu-plexus-java{a} libslf4j-java{a} libsnappy-java{a} libsnappy-jni{a} libsnappy1v5{a} libsoup-2.4-1{a} libsoup2.4-common{a} libssh2-1t64{a} libsub-quote-perl{a} libswing-layout-java{a} libsystemd-shared{a} libtext-iconv-perl{a} libthai-data{a} libthai0{a} libtiff6{a} libtimedate-perl{a} libtirpc-common{a} libtirpc3t64{a} libtool{a} libtry-tiny-perl{a} libuchardet0{a} libunivocity-parsers-java{a} liburi-perl{a} libvisio-0.1-1{a} libvulkan1{a} libwagon-file-java{a} libwagon-http-java{a} libwagon-provider-api-java{a} libwayland-client0{a} libwayland-cursor0{a} libwayland-egl1{a} libwayland-server0{a} libwebp7{a} libwebsocket-api-java{a} libwpd-0.10-10{a} libwpg-0.3-3{a} libwww-perl{a} libwww-robotrules-perl{a} libx11-6{a} libx11-data{a} libx11-xcb1{a} libxau6{a} libxbean-reflect-java{a} libxcb-dri2-0{a} libxcb-dri3-0{a} libxcb-glx0{a} libxcb-present0{a} libxcb-randr0{a} libxcb-render0{a} libxcb-shm0{a} libxcb-sync1{a} libxcb-xfixes0{a} libxcb1{a} libxcomposite1{a} libxcursor1{a} libxdamage1{a} libxdmcp6{a} libxerces2-java{a} libxext6{a} libxfixes3{a} libxi6{a} libxinerama1{a} libxkbcommon0{a} libxml-commons-external-java{a} libxml-commons-resolver1.1-java{a} libxml2{a} libxmlgraphics-commons-java{a} libxpp3-java{a} libxrandr2{a} libxrender1{a} libxshmfence1{a} libxslt1.1{a} libxstream-java{a} libxtst6{a} libxxf86vm1{a} libxz-java{a} libyaml-snake-java{a} libz3-4{a} m4{a} man-db{a} maven-repo-helper{a} media-types{a} mesa-libgallium{a} ncbi-vdb-data{a} netbase{a} openjdk-21-jdk{a} openjdk-21-jdk-headless{a} openjdk-21-jre{a} openjdk-21-jre-headless{a} openjfx{a} openssl{a} patchutils{a} perl-openssl-defaults{a} pinentry-curses{a} po-debconf{a} procps{a} python3{a} python3-minimal{a} python3.12{a} python3.12-minimal{a} readline-common{a} sensible-utils{a} shared-mime-info{a} systemd{a} systemd-sysv{a} testng{a} tzdata{a} unzip{a} wdiff{a} x11-common{a} xkb-data{a} The following packages are RECOMMENDED but will NOT be installed: alsa-topology-conf alsa-ucm-conf aspell aspell-am aspell-ar aspell-ar-large aspell-bg aspell-br aspell-ca aspell-cs aspell-cy aspell-da aspell-de aspell-de-1901 aspell-el aspell-en aspell-eo aspell-eo-cx7 aspell-es aspell-et aspell-eu aspell-fa aspell-fo aspell-fr aspell-ga aspell-gl-minimos aspell-he aspell-hr aspell-hsb aspell-hu aspell-hy aspell-is aspell-it aspell-kk aspell-ku aspell-lt aspell-lv aspell-nl aspell-no aspell-pl aspell-pt-br aspell-pt-pt aspell-ro aspell-ru aspell-sk aspell-sl aspell-sv aspell-tl aspell-uk aspell-uz at-spi2-core chrony curl debian-keyring dput dput-ng dupload enchant-2 equivs fig2dev fonts-dejavu-extra gnome-themes-extra gnupg-utils gpg-wks-client graphicsmagick-imagemagick-compat imagemagick imagemagick-6.q16 imagemagick-7.q16 javascript-common krb5-locales libarchive-cpio-perl libatk-wrapper-java-jni libbindex-java libdata-dump-perl libdistro-info-perl libgail-common libgdk-pixbuf2.0-bin libgit-wrapper-perl libgitlab-api-v4-perl libglib2.0-data libgpars-groovy-java libgtk-3-bin libgtk2.0-bin libhtml-form-perl libhtml-format-perl libhttp-daemon-perl libimage-magick-perl libio-compress-brotli-perl libjson-perl libkmod2 libldap-common liblist-compare-perl libltdl-dev libmail-sendmail-perl libmailtools-perl libnamespace-clean-perl libnss-systemd libreflectasm-java-doc libsasl2-modules libsoap-lite-perl libstring-shellquote-perl libwmf-bin libxstring-perl libxt-dev licensecheck lintian linux-sysctl-defaults lynx mesa-vulkan-drivers ntpsec openjfx-source openntpd poppler-data pristine-tar psmisc publicsuffix python3-apt python3-cssselect python3-debian python3-lxml python3-magic python3-numpy python3-requests python3-scour python3-unidiff python3-xdg strace systemd-cryptsetup systemd-timesyncd wget xdg-user-dirs 0 packages upgraded, 469 newly installed, 0 to remove and 0 not upgraded. Need to get 455 MB of archives. After unpacking 1262 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main amd64 libapparmor1 amd64 3.1.7-1+b3 [42.1 kB] Get: 2 http://deb.debian.org/debian unstable/main amd64 libsystemd-shared amd64 257~rc2-3 [2133 kB] Get: 3 http://deb.debian.org/debian unstable/main amd64 systemd amd64 257~rc2-3 [3603 kB] Get: 4 http://deb.debian.org/debian unstable/main amd64 systemd-sysv amd64 257~rc2-3 [59.3 kB] Get: 5 http://deb.debian.org/debian unstable/main amd64 libdbus-1-3 amd64 1.14.10-6 [203 kB] Get: 6 http://deb.debian.org/debian unstable/main amd64 dbus-bin amd64 1.14.10-6 [106 kB] Get: 7 http://deb.debian.org/debian unstable/main amd64 dbus-session-bus-common all 1.14.10-6 [79.2 kB] Get: 8 http://deb.debian.org/debian unstable/main amd64 libexpat1 amd64 2.6.4-1 [106 kB] Get: 9 http://deb.debian.org/debian unstable/main amd64 dbus-daemon amd64 1.14.10-6 [185 kB] Get: 10 http://deb.debian.org/debian unstable/main amd64 dbus-system-bus-common all 1.14.10-6 [80.2 kB] Get: 11 http://deb.debian.org/debian unstable/main amd64 dbus amd64 1.14.10-6 [98.5 kB] Get: 12 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 13 http://deb.debian.org/debian unstable/main amd64 binfmt-support amd64 2.2.2-7 [64.3 kB] Get: 14 http://deb.debian.org/debian unstable/main amd64 libpython3.12-minimal amd64 3.12.7-3 [815 kB] Get: 15 http://deb.debian.org/debian unstable/main amd64 python3.12-minimal amd64 3.12.7-3 [2162 kB] Get: 16 http://deb.debian.org/debian unstable/main amd64 python3-minimal amd64 3.12.7-1 [26.8 kB] Get: 17 http://deb.debian.org/debian unstable/main amd64 media-types all 10.1.0 [26.9 kB] Get: 18 http://deb.debian.org/debian unstable/main amd64 netbase all 6.4 [12.8 kB] Get: 19 http://deb.debian.org/debian unstable/main amd64 tzdata all 2024b-3 [255 kB] Get: 20 http://deb.debian.org/debian unstable/main amd64 libkrb5support0 amd64 1.21.3-3 [32.5 kB] Get: 21 http://deb.debian.org/debian unstable/main amd64 libcom-err2 amd64 1.47.1-1+b1 [23.2 kB] Get: 22 http://deb.debian.org/debian unstable/main amd64 libk5crypto3 amd64 1.21.3-3 [79.9 kB] Get: 23 http://deb.debian.org/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-4 [9092 B] Get: 24 http://deb.debian.org/debian unstable/main amd64 libkrb5-3 amd64 1.21.3-3 [324 kB] Get: 25 http://deb.debian.org/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.21.3-3 [136 kB] Get: 26 http://deb.debian.org/debian unstable/main amd64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get: 27 http://deb.debian.org/debian unstable/main amd64 libtirpc3t64 amd64 1.3.4+ds-1.3+b1 [83.1 kB] Get: 28 http://deb.debian.org/debian unstable/main amd64 libnsl2 amd64 1.3.0-3+b3 [40.6 kB] Get: 29 http://deb.debian.org/debian unstable/main amd64 readline-common all 8.2-5 [69.3 kB] Get: 30 http://deb.debian.org/debian unstable/main amd64 libreadline8t64 amd64 8.2-5 [169 kB] Get: 31 http://deb.debian.org/debian unstable/main amd64 libpython3.12-stdlib amd64 3.12.7-3 [1966 kB] Get: 32 http://deb.debian.org/debian unstable/main amd64 python3.12 amd64 3.12.7-3 [671 kB] Get: 33 http://deb.debian.org/debian unstable/main amd64 libpython3-stdlib amd64 3.12.7-1 [9712 B] Get: 34 http://deb.debian.org/debian unstable/main amd64 python3 amd64 3.12.7-1 [27.8 kB] Get: 35 http://deb.debian.org/debian unstable/main amd64 libproc2-0 amd64 2:4.0.4-6 [64.8 kB] Get: 36 http://deb.debian.org/debian unstable/main amd64 procps amd64 2:4.0.4-6 [879 kB] Get: 37 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get: 38 http://deb.debian.org/debian unstable/main amd64 openssl amd64 3.3.2-2 [1382 kB] Get: 39 http://deb.debian.org/debian unstable/main amd64 ca-certificates all 20240203 [158 kB] Get: 40 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB] Get: 41 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB] Get: 42 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.45-3+b1 [43.3 kB] Get: 43 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.22.5-2 [200 kB] Get: 44 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get: 45 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-5 [1181 kB] Get: 46 http://deb.debian.org/debian unstable/main amd64 libpam-systemd amd64 257~rc2-3 [291 kB] Get: 47 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.40.2-11 [91.5 kB] Get: 48 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get: 49 http://deb.debian.org/debian unstable/main amd64 libgdk-pixbuf2.0-common all 2.42.12+dfsg-1 [311 kB] Get: 50 http://deb.debian.org/debian unstable/main amd64 libglib2.0-0t64 amd64 2.82.2-3 [1501 kB] Get: 51 http://deb.debian.org/debian unstable/main amd64 libicu72 amd64 72.1-5+b1 [9423 kB] Get: 52 http://deb.debian.org/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [699 kB] Get: 53 http://deb.debian.org/debian unstable/main amd64 shared-mime-info amd64 2.4-5+b1 [759 kB] Get: 54 http://deb.debian.org/debian unstable/main amd64 libjpeg62-turbo amd64 1:2.1.5-3+b1 [168 kB] Get: 55 http://deb.debian.org/debian unstable/main amd64 libpng16-16t64 amd64 1.6.44-2 [280 kB] Get: 56 http://deb.debian.org/debian unstable/main amd64 libdeflate0 amd64 1.22-1 [47.3 kB] Get: 57 http://deb.debian.org/debian unstable/main amd64 libjbig0 amd64 2.1-6.1+b2 [32.1 kB] Get: 58 http://deb.debian.org/debian unstable/main amd64 liblerc4 amd64 4.0.0+ds-5 [183 kB] Get: 59 http://deb.debian.org/debian unstable/main amd64 libsharpyuv0 amd64 1.4.0-0.1+b1 [113 kB] Get: 60 http://deb.debian.org/debian unstable/main amd64 libwebp7 amd64 1.4.0-0.1+b1 [313 kB] Get: 61 http://deb.debian.org/debian unstable/main amd64 libtiff6 amd64 4.5.1+git230720-5 [324 kB] Get: 62 http://deb.debian.org/debian unstable/main amd64 libgdk-pixbuf-2.0-0 amd64 2.42.12+dfsg-1+b1 [141 kB] Get: 63 http://deb.debian.org/debian unstable/main amd64 gtk-update-icon-cache amd64 4.16.5+ds-2 [50.3 kB] Get: 64 http://deb.debian.org/debian unstable/main amd64 hicolor-icon-theme all 0.18-1 [12.0 kB] Get: 65 http://deb.debian.org/debian unstable/main amd64 adwaita-icon-theme all 47.0-2 [463 kB] Get: 66 http://deb.debian.org/debian unstable/main amd64 ca-certificates-java all 20240118 [11.6 kB] Get: 67 http://deb.debian.org/debian unstable/main amd64 java-common all 0.76 [6776 B] Get: 68 http://deb.debian.org/debian unstable/main amd64 liblcms2-2 amd64 2.16-2 [160 kB] Get: 69 http://deb.debian.org/debian unstable/main amd64 libnspr4 amd64 2:4.36-1 [110 kB] Get: 70 http://deb.debian.org/debian unstable/main amd64 libnss3 amd64 2:3.106-1 [1392 kB] Get: 71 http://deb.debian.org/debian unstable/main amd64 libpcsclite1 amd64 2.3.0-3 [55.8 kB] Get: 72 http://deb.debian.org/debian unstable/main amd64 openjdk-21-jre-headless amd64 21.0.5+11-1 [41.8 MB] Get: 73 http://deb.debian.org/debian unstable/main amd64 default-jre-headless amd64 2:1.21-76 [3192 B] Get: 74 http://deb.debian.org/debian unstable/main amd64 ant all 1.10.15-1 [2163 kB] Get: 75 http://deb.debian.org/debian unstable/main amd64 ant-optional all 1.10.15-1 [456 kB] Get: 76 http://deb.debian.org/debian unstable/main amd64 libantlr-java all 2.7.7+dfsg-14 [458 kB] Get: 77 http://deb.debian.org/debian unstable/main amd64 antlr all 2.7.7+dfsg-14 [8376 B] Get: 78 http://deb.debian.org/debian unstable/main amd64 at-spi2-common all 2.54.0-1 [170 kB] Get: 79 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.19-4 [287 kB] Get: 80 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.72-3 [493 kB] Get: 81 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 82 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 83 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.22.5-2 [723 kB] Get: 84 http://deb.debian.org/debian unstable/main amd64 unzip amd64 6.0-28 [166 kB] Get: 85 http://deb.debian.org/debian unstable/main amd64 java-wrappers all 0.5 [8848 B] Get: 86 http://deb.debian.org/debian unstable/main amd64 libhamcrest-java all 2.2-2 [121 kB] Get: 87 http://deb.debian.org/debian unstable/main amd64 junit4 all 4.13.2-5 [350 kB] Get: 88 http://deb.debian.org/debian unstable/main amd64 libfelix-framework-java all 4.6.1-2.1 [569 kB] Get: 89 http://deb.debian.org/debian unstable/main amd64 libfelix-gogo-runtime-java all 0.16.2-1.1 [114 kB] Get: 90 http://deb.debian.org/debian unstable/main amd64 libosgi-annotation-java all 8.1.0-1 [9436 B] Get: 91 http://deb.debian.org/debian unstable/main amd64 libosgi-core-java all 8.0.0-2 [182 kB] Get: 92 http://deb.debian.org/debian unstable/main amd64 libfelix-resolver-java all 1.16.0-1 [180 kB] Get: 93 http://deb.debian.org/debian unstable/main amd64 libhawtjni-runtime-java all 1.18-1 [36.3 kB] Get: 94 http://deb.debian.org/debian unstable/main amd64 libjansi-native-java all 1.8-2 [26.0 kB] Get: 95 http://deb.debian.org/debian unstable/main amd64 libjansi1-java all 1.18-3 [66.5 kB] Get: 96 http://deb.debian.org/debian unstable/main amd64 libjline2-java all 2.14.6-5 [151 kB] Get: 97 http://deb.debian.org/debian unstable/main amd64 libosgi-compendium-java all 7.0.0-1 [477 kB] Get: 98 http://deb.debian.org/debian unstable/main amd64 libslf4j-java all 1.7.32-1 [144 kB] Get: 99 http://deb.debian.org/debian unstable/main amd64 libxz-java all 1.9-1 [143 kB] Get: 100 http://deb.debian.org/debian unstable/main amd64 libyaml-snake-java all 1.33-2 [321 kB] Get: 101 http://deb.debian.org/debian unstable/main amd64 bnd all 5.0.1-5 [10.1 MB] Get: 102 http://deb.debian.org/debian unstable/main amd64 dbus-user-session amd64 1.14.10-6 [79.0 kB] Get: 103 http://deb.debian.org/debian unstable/main amd64 libdconf1 amd64 0.40.0-4+b3 [41.9 kB] Get: 104 http://deb.debian.org/debian unstable/main amd64 dconf-service amd64 0.40.0-4+b3 [32.6 kB] Get: 105 http://deb.debian.org/debian unstable/main amd64 dconf-gsettings-backend amd64 0.40.0-4+b3 [28.8 kB] Get: 106 http://deb.debian.org/debian unstable/main amd64 dctrl-tools amd64 2.24-3+b1 [104 kB] Get: 107 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.20 [89.7 kB] Get: 108 http://deb.debian.org/debian unstable/main amd64 libtool all 2.4.7-8 [517 kB] Get: 109 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 110 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 111 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 112 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 113 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get: 114 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 115 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.22.5-2 [1601 kB] Get: 116 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 117 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 118 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.20 [915 kB] Get: 119 http://deb.debian.org/debian unstable/main amd64 libatk1.0-0t64 amd64 2.54.0-1 [51.2 kB] Get: 120 http://deb.debian.org/debian unstable/main amd64 libxau6 amd64 1:1.0.11-1 [20.4 kB] Get: 121 http://deb.debian.org/debian unstable/main amd64 libxdmcp6 amd64 1:1.1.5-1 [27.8 kB] Get: 122 http://deb.debian.org/debian unstable/main amd64 libxcb1 amd64 1.17.0-2+b1 [144 kB] Get: 123 http://deb.debian.org/debian unstable/main amd64 libx11-data all 2:1.8.10-2 [337 kB] Get: 124 http://deb.debian.org/debian unstable/main amd64 libx11-6 amd64 2:1.8.10-2 [813 kB] Get: 125 http://deb.debian.org/debian unstable/main amd64 libxext6 amd64 2:1.3.4-1+b2 [50.5 kB] Get: 126 http://deb.debian.org/debian unstable/main amd64 libxi6 amd64 2:1.8.2-1 [78.9 kB] Get: 127 http://deb.debian.org/debian unstable/main amd64 libatspi2.0-0t64 amd64 2.54.0-1 [76.4 kB] Get: 128 http://deb.debian.org/debian unstable/main amd64 libatk-bridge2.0-0t64 amd64 2.54.0-1 [67.6 kB] Get: 129 http://deb.debian.org/debian unstable/main amd64 libbrotli1 amd64 1.1.0-2+b6 [302 kB] Get: 130 http://deb.debian.org/debian unstable/main amd64 libfreetype6 amd64 2.13.3+dfsg-1 [452 kB] Get: 131 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-mono all 2.37-8 [489 kB] Get: 132 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-core all 2.37-8 [840 kB] Get: 133 http://deb.debian.org/debian unstable/main amd64 fontconfig-config amd64 2.15.0-1.1+b1 [318 kB] Get: 134 http://deb.debian.org/debian unstable/main amd64 libfontconfig1 amd64 2.15.0-1.1+b1 [391 kB] Get: 135 http://deb.debian.org/debian unstable/main amd64 libpixman-1-0 amd64 0.44.0-3 [248 kB] Get: 136 http://deb.debian.org/debian unstable/main amd64 libxcb-render0 amd64 1.17.0-2+b1 [115 kB] Get: 137 http://deb.debian.org/debian unstable/main amd64 libxcb-shm0 amd64 1.17.0-2+b1 [105 kB] Get: 138 http://deb.debian.org/debian unstable/main amd64 libxrender1 amd64 1:0.9.10-1.1+b2 [27.8 kB] Get: 139 http://deb.debian.org/debian unstable/main amd64 libcairo2 amd64 1.18.2-2 [535 kB] Get: 140 http://deb.debian.org/debian unstable/main amd64 libcairo-gobject2 amd64 1.18.2-2 [130 kB] Get: 141 http://deb.debian.org/debian unstable/main amd64 libcloudproviders0 amd64 0.3.6-1+b1 [29.2 kB] Get: 142 http://deb.debian.org/debian unstable/main amd64 libcolord2 amd64 1.4.7-1+b2 [140 kB] Get: 143 http://deb.debian.org/debian unstable/main amd64 libavahi-common-data amd64 0.8-13+b3 [112 kB] Get: 144 http://deb.debian.org/debian unstable/main amd64 libavahi-common3 amd64 0.8-13+b3 [43.2 kB] Get: 145 http://deb.debian.org/debian unstable/main amd64 libavahi-client3 amd64 0.8-13+b3 [47.5 kB] Get: 146 http://deb.debian.org/debian unstable/main amd64 libcups2t64 amd64 2.4.10-2 [251 kB] Get: 147 http://deb.debian.org/debian unstable/main amd64 libepoxy0 amd64 1.5.10-2 [193 kB] Get: 148 http://deb.debian.org/debian unstable/main amd64 libfribidi0 amd64 1.0.15-1 [71.8 kB] Get: 149 http://deb.debian.org/debian unstable/main amd64 libgraphite2-3 amd64 1.3.14-2+b1 [75.4 kB] Get: 150 http://deb.debian.org/debian unstable/main amd64 libharfbuzz0b amd64 10.0.1-1 [477 kB] Get: 151 http://deb.debian.org/debian unstable/main amd64 fontconfig amd64 2.15.0-1.1+b1 [463 kB] Get: 152 http://deb.debian.org/debian unstable/main amd64 libthai-data all 0.1.29-2 [168 kB] Get: 153 http://deb.debian.org/debian unstable/main amd64 libdatrie1 amd64 0.2.13-3+b1 [38.1 kB] Get: 154 http://deb.debian.org/debian unstable/main amd64 libthai0 amd64 0.1.29-2+b1 [49.4 kB] Get: 155 http://deb.debian.org/debian unstable/main amd64 libpango-1.0-0 amd64 1.54.0+ds-3 [223 kB] Get: 156 http://deb.debian.org/debian unstable/main amd64 libpangoft2-1.0-0 amd64 1.54.0+ds-3 [54.2 kB] Get: 157 http://deb.debian.org/debian unstable/main amd64 libpangocairo-1.0-0 amd64 1.54.0+ds-3 [35.2 kB] Get: 158 http://deb.debian.org/debian unstable/main amd64 libwayland-client0 amd64 1.23.0-1+b1 [26.6 kB] Get: 159 http://deb.debian.org/debian unstable/main amd64 libwayland-cursor0 amd64 1.23.0-1+b1 [11.7 kB] Get: 160 http://deb.debian.org/debian unstable/main amd64 libwayland-egl1 amd64 1.23.0-1+b1 [5664 B] Get: 161 http://deb.debian.org/debian unstable/main amd64 libxcomposite1 amd64 1:0.4.6-1 [16.3 kB] Get: 162 http://deb.debian.org/debian unstable/main amd64 libxfixes3 amd64 1:6.0.0-2+b2 [20.3 kB] Get: 163 http://deb.debian.org/debian unstable/main amd64 libxcursor1 amd64 1:1.2.2-1+b1 [37.6 kB] Get: 164 http://deb.debian.org/debian unstable/main amd64 libxdamage1 amd64 1:1.1.6-1+b2 [15.5 kB] Get: 165 http://deb.debian.org/debian unstable/main amd64 libxinerama1 amd64 2:1.1.4-3+b2 [16.0 kB] Get: 166 http://deb.debian.org/debian unstable/main amd64 xkb-data all 2.42-1 [790 kB] Get: 167 http://deb.debian.org/debian unstable/main amd64 libxkbcommon0 amd64 1.7.0-1 [113 kB] Get: 168 http://deb.debian.org/debian unstable/main amd64 libxrandr2 amd64 2:1.5.4-1+b1 [36.3 kB] Get: 169 http://deb.debian.org/debian unstable/main amd64 libgtk-3-common all 3.24.43-4 [4657 kB] Get: 170 http://deb.debian.org/debian unstable/main amd64 libgtk-3-0t64 amd64 3.24.43-4 [2754 kB] Get: 171 http://deb.debian.org/debian unstable/main amd64 libglvnd0 amd64 1.7.0-1+b2 [52.0 kB] Get: 172 http://deb.debian.org/debian unstable/main amd64 libdrm-common all 2.4.123-1 [8084 B] Get: 173 http://deb.debian.org/debian unstable/main amd64 libdrm2 amd64 2.4.123-1 [38.7 kB] Get: 174 http://deb.debian.org/debian unstable/main amd64 libglapi-mesa amd64 24.2.7-1 [37.9 kB] Get: 175 http://deb.debian.org/debian unstable/main amd64 libx11-xcb1 amd64 2:1.8.10-2 [241 kB] Get: 176 http://deb.debian.org/debian unstable/main amd64 libxcb-dri2-0 amd64 1.17.0-2+b1 [107 kB] Get: 177 http://deb.debian.org/debian unstable/main amd64 libxcb-dri3-0 amd64 1.17.0-2+b1 [107 kB] Get: 178 http://deb.debian.org/debian unstable/main amd64 libxcb-glx0 amd64 1.17.0-2+b1 [122 kB] Get: 179 http://deb.debian.org/debian unstable/main amd64 libxcb-present0 amd64 1.17.0-2+b1 [106 kB] Get: 180 http://deb.debian.org/debian unstable/main amd64 libxcb-randr0 amd64 1.17.0-2+b1 [117 kB] Get: 181 http://deb.debian.org/debian unstable/main amd64 libxcb-sync1 amd64 1.17.0-2+b1 [109 kB] Get: 182 http://deb.debian.org/debian unstable/main amd64 libxcb-xfixes0 amd64 1.17.0-2+b1 [109 kB] Get: 183 http://deb.debian.org/debian unstable/main amd64 libxshmfence1 amd64 1.3-1+b2 [8848 B] Get: 184 http://deb.debian.org/debian unstable/main amd64 libxxf86vm1 amd64 1:1.1.4-1+b3 [19.3 kB] Get: 185 http://deb.debian.org/debian unstable/main amd64 libdrm-amdgpu1 amd64 2.4.123-1 [22.3 kB] Get: 186 http://deb.debian.org/debian unstable/main amd64 libpciaccess0 amd64 0.17-3+b2 [51.9 kB] Get: 187 http://deb.debian.org/debian unstable/main amd64 libdrm-intel1 amd64 2.4.123-1 [63.7 kB] Get: 188 http://deb.debian.org/debian unstable/main amd64 libdrm-radeon1 amd64 2.4.123-1 [22.3 kB] Get: 189 http://deb.debian.org/debian unstable/main amd64 libedit2 amd64 3.1-20240808-1 [93.9 kB] Get: 190 http://deb.debian.org/debian unstable/main amd64 libz3-4 amd64 4.13.3-1 [8560 kB] Get: 191 http://deb.debian.org/debian unstable/main amd64 libllvm19 amd64 1:19.1.3-2 [26.0 MB] Get: 192 http://deb.debian.org/debian unstable/main amd64 libsensors-config all 1:3.6.0-10 [14.6 kB] Get: 193 http://deb.debian.org/debian unstable/main amd64 libsensors5 amd64 1:3.6.0-10+b1 [35.1 kB] Get: 194 http://deb.debian.org/debian unstable/main amd64 mesa-libgallium amd64 24.2.7-1 [9186 kB] Get: 195 http://deb.debian.org/debian unstable/main amd64 libvulkan1 amd64 1.3.296.0-1 [126 kB] Get: 196 http://deb.debian.org/debian unstable/main amd64 libwayland-server0 amd64 1.23.0-1+b1 [34.2 kB] Get: 197 http://deb.debian.org/debian unstable/main amd64 libgbm1 amd64 24.2.7-1 [42.8 kB] Get: 198 http://deb.debian.org/debian unstable/main amd64 libgl1-mesa-dri amd64 24.2.7-1 [43.9 kB] Get: 199 http://deb.debian.org/debian unstable/main amd64 libglx-mesa0 amd64 24.2.7-1 [154 kB] Get: 200 http://deb.debian.org/debian unstable/main amd64 libglx0 amd64 1.7.0-1+b2 [34.9 kB] Get: 201 http://deb.debian.org/debian unstable/main amd64 libgl1 amd64 1.7.0-1+b2 [89.5 kB] Get: 202 http://deb.debian.org/debian unstable/main amd64 libasound2-data all 1.2.12-1 [21.0 kB] Get: 203 http://deb.debian.org/debian unstable/main amd64 libasound2t64 amd64 1.2.12-1+b1 [371 kB] Get: 204 http://deb.debian.org/debian unstable/main amd64 libgif7 amd64 5.2.2-1+b1 [44.2 kB] Get: 205 http://deb.debian.org/debian unstable/main amd64 x11-common all 1:7.7+23.1 [216 kB] Get: 206 http://deb.debian.org/debian unstable/main amd64 libxtst6 amd64 2:1.2.3-1.1+b2 [25.9 kB] Get: 207 http://deb.debian.org/debian unstable/main amd64 openjdk-21-jre amd64 21.0.5+11-1 [205 kB] Get: 208 http://deb.debian.org/debian unstable/main amd64 default-jre amd64 2:1.21-76 [1068 B] Get: 209 http://deb.debian.org/debian unstable/main amd64 openjdk-21-jdk-headless amd64 21.0.5+11-1 [82.8 MB] Get: 210 http://deb.debian.org/debian unstable/main amd64 default-jdk-headless amd64 2:1.21-76 [1124 B] Get: 211 http://deb.debian.org/debian unstable/main amd64 openjdk-21-jdk amd64 21.0.5+11-1 [3360 kB] Get: 212 http://deb.debian.org/debian unstable/main amd64 default-jdk amd64 2:1.21-76 [1076 B] Get: 213 http://deb.debian.org/debian unstable/main amd64 libassuan9 amd64 3.0.1-2 [60.6 kB] Get: 214 http://deb.debian.org/debian unstable/main amd64 gpgconf amd64 2.2.45-2 [120 kB] Get: 215 http://deb.debian.org/debian unstable/main amd64 libksba8 amd64 1.6.7-2+b1 [136 kB] Get: 216 http://deb.debian.org/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-8 [19.6 kB] Get: 217 http://deb.debian.org/debian unstable/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-8 [57.3 kB] Get: 218 http://deb.debian.org/debian unstable/main amd64 libldap-2.5-0 amd64 2.5.18+dfsg-3+b1 [188 kB] Get: 219 http://deb.debian.org/debian unstable/main amd64 libnpth0t64 amd64 1.6-3.1+b1 [18.2 kB] Get: 220 http://deb.debian.org/debian unstable/main amd64 dirmngr amd64 2.2.45-2 [368 kB] Get: 221 http://deb.debian.org/debian unstable/main amd64 gnupg-l10n all 2.2.45-2 [705 kB] Get: 222 http://deb.debian.org/debian unstable/main amd64 gpg amd64 2.2.45-2 [531 kB] Get: 223 http://deb.debian.org/debian unstable/main amd64 pinentry-curses amd64 1.2.1-4+b1 [79.7 kB] Get: 224 http://deb.debian.org/debian unstable/main amd64 gpg-agent amd64 2.2.45-2 [251 kB] Get: 225 http://deb.debian.org/debian unstable/main amd64 gpgsm amd64 2.2.45-2 [255 kB] Get: 226 http://deb.debian.org/debian unstable/main amd64 gnupg all 2.2.45-2 [376 kB] Get: 227 http://deb.debian.org/debian unstable/main amd64 libfile-dirlist-perl all 0.05-3 [7600 B] Get: 228 http://deb.debian.org/debian unstable/main amd64 libfile-which-perl all 1.27-2 [15.1 kB] Get: 229 http://deb.debian.org/debian unstable/main amd64 libfile-homedir-perl all 1.006-2 [42.4 kB] Get: 230 http://deb.debian.org/debian unstable/main amd64 libfile-touch-perl all 0.12-2 [8816 B] Get: 231 http://deb.debian.org/debian unstable/main amd64 libio-pty-perl amd64 1:1.20-1+b2 [34.3 kB] Get: 232 http://deb.debian.org/debian unstable/main amd64 libipc-run-perl all 20231003.0-2 [101 kB] Get: 233 http://deb.debian.org/debian unstable/main amd64 libclass-method-modifiers-perl all 2.15-1 [18.0 kB] Get: 234 http://deb.debian.org/debian unstable/main amd64 libclass-xsaccessor-perl amd64 1.19-4+b4 [36.1 kB] Get: 235 http://deb.debian.org/debian unstable/main amd64 libb-hooks-op-check-perl amd64 0.22-3+b2 [10.6 kB] Get: 236 http://deb.debian.org/debian unstable/main amd64 libdynaloader-functions-perl all 0.004-1 [12.1 kB] Get: 237 http://deb.debian.org/debian unstable/main amd64 libdevel-callchecker-perl amd64 0.009-1+b1 [16.2 kB] Get: 238 http://deb.debian.org/debian unstable/main amd64 libparams-classify-perl amd64 0.015-2+b4 [22.5 kB] Get: 239 http://deb.debian.org/debian unstable/main amd64 libmodule-runtime-perl all 0.016-2 [19.6 kB] Get: 240 http://deb.debian.org/debian unstable/main amd64 libimport-into-perl all 1.002005-2 [11.3 kB] Get: 241 http://deb.debian.org/debian unstable/main amd64 librole-tiny-perl all 2.002004-1 [21.4 kB] Get: 242 http://deb.debian.org/debian unstable/main amd64 libsub-quote-perl all 2.006008-1 [21.8 kB] Get: 243 http://deb.debian.org/debian unstable/main amd64 libmoo-perl all 2.005005-1 [58.0 kB] Get: 244 http://deb.debian.org/debian unstable/main amd64 libencode-locale-perl all 1.05-3 [12.9 kB] Get: 245 http://deb.debian.org/debian unstable/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get: 246 http://deb.debian.org/debian unstable/main amd64 libhttp-date-perl all 6.06-1 [10.7 kB] Get: 247 http://deb.debian.org/debian unstable/main amd64 libfile-listing-perl all 6.16-1 [12.4 kB] Get: 248 http://deb.debian.org/debian unstable/main amd64 libhtml-tagset-perl all 3.24-1 [14.7 kB] Get: 249 http://deb.debian.org/debian unstable/main amd64 liburi-perl all 5.30-1 [105 kB] Get: 250 http://deb.debian.org/debian unstable/main amd64 libhtml-parser-perl amd64 3.83-1+b1 [99.7 kB] Get: 251 http://deb.debian.org/debian unstable/main amd64 libhtml-tree-perl all 5.07-3 [211 kB] Get: 252 http://deb.debian.org/debian unstable/main amd64 libclone-perl amd64 0.47-1+b1 [13.9 kB] Get: 253 http://deb.debian.org/debian unstable/main amd64 libio-html-perl all 1.004-3 [16.2 kB] Get: 254 http://deb.debian.org/debian unstable/main amd64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get: 255 http://deb.debian.org/debian unstable/main amd64 libhttp-message-perl all 7.00-2 [79.8 kB] Get: 256 http://deb.debian.org/debian unstable/main amd64 libhttp-cookies-perl all 6.11-1 [19.1 kB] Get: 257 http://deb.debian.org/debian unstable/main amd64 libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get: 258 http://deb.debian.org/debian unstable/main amd64 perl-openssl-defaults amd64 7+b2 [6724 B] Get: 259 http://deb.debian.org/debian unstable/main amd64 libnet-ssleay-perl amd64 1.94-2 [339 kB] Get: 260 http://deb.debian.org/debian unstable/main amd64 libio-socket-ssl-perl all 2.089-1 [223 kB] Get: 261 http://deb.debian.org/debian unstable/main amd64 libnet-http-perl all 6.23-1 [23.9 kB] Get: 262 http://deb.debian.org/debian unstable/main amd64 liblwp-protocol-https-perl all 6.14-1 [10.8 kB] Get: 263 http://deb.debian.org/debian unstable/main amd64 libtry-tiny-perl all 0.32-1 [22.9 kB] Get: 264 http://deb.debian.org/debian unstable/main amd64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get: 265 http://deb.debian.org/debian unstable/main amd64 libwww-perl all 6.77-1 [183 kB] Get: 266 http://deb.debian.org/debian unstable/main amd64 patchutils amd64 0.4.2-1 [77.5 kB] Get: 267 http://deb.debian.org/debian unstable/main amd64 wdiff amd64 1.2.2-6 [119 kB] Get: 268 http://deb.debian.org/debian unstable/main amd64 devscripts all 2.24.3 [1079 kB] Get: 269 http://deb.debian.org/debian unstable/main amd64 libtext-iconv-perl amd64 1.7-8+b4 [14.4 kB] Get: 270 http://deb.debian.org/debian unstable/main amd64 emacsen-common all 3.0.5 [12.3 kB] Get: 271 http://deb.debian.org/debian unstable/main amd64 dictionaries-common all 1.30.1 [172 kB] Get: 272 http://deb.debian.org/debian unstable/main amd64 fastjar amd64 2:0.98-7 [80.1 kB] Get: 273 http://deb.debian.org/debian unstable/main amd64 libnghttp2-14 amd64 1.64.0-1 [75.5 kB] Get: 274 http://deb.debian.org/debian unstable/main amd64 libnghttp3-9 amd64 1.4.0-1+b1 [63.6 kB] Get: 275 http://deb.debian.org/debian unstable/main amd64 libngtcp2-16 amd64 1.6.0-1 [122 kB] Get: 276 http://deb.debian.org/debian unstable/main amd64 libngtcp2-crypto-gnutls8 amd64 1.6.0-1 [19.6 kB] Get: 277 http://deb.debian.org/debian unstable/main amd64 libpsl5t64 amd64 0.21.2-1.1+b1 [57.2 kB] Get: 278 http://deb.debian.org/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b5 [58.8 kB] Get: 279 http://deb.debian.org/debian unstable/main amd64 libssh2-1t64 amd64 1.11.1-1 [245 kB] Get: 280 http://deb.debian.org/debian unstable/main amd64 libcurl3t64-gnutls amd64 8.11.0-1 [359 kB] Get: 281 http://deb.debian.org/debian unstable/main amd64 libduktape207 amd64 2.7.0-2+b2 [135 kB] Get: 282 http://deb.debian.org/debian unstable/main amd64 libproxy1v5 amd64 0.5.9-1 [26.4 kB] Get: 283 http://deb.debian.org/debian unstable/main amd64 glib-networking-common all 2.80.0-1 [83.9 kB] Get: 284 http://deb.debian.org/debian unstable/main amd64 glib-networking-services amd64 2.80.0-1 [12.2 kB] Get: 285 http://deb.debian.org/debian unstable/main amd64 gsettings-desktop-schemas all 47.1-1 [689 kB] Get: 286 http://deb.debian.org/debian unstable/main amd64 glib-networking amd64 2.80.0-1 [68.8 kB] Get: 287 http://deb.debian.org/debian unstable/main amd64 ivy all 2.5.2-1 [1295 kB] Get: 288 http://deb.debian.org/debian unstable/main amd64 libasm-java all 9.7.1-1 [391 kB] Get: 289 http://deb.debian.org/debian unstable/main amd64 libbsf-java all 1:2.4.0-8 [76.3 kB] Get: 290 http://deb.debian.org/debian unstable/main amd64 libcommons-cli-java all 1.6.0-1 [60.4 kB] Get: 291 http://deb.debian.org/debian unstable/main amd64 libapache-pom-java all 33-2 [5852 B] Get: 292 http://deb.debian.org/debian unstable/main amd64 libcommons-parent-java all 56-1 [10.8 kB] Get: 293 http://deb.debian.org/debian unstable/main amd64 libcommons-logging-java all 1.3.0-1 [68.6 kB] Get: 294 http://deb.debian.org/debian unstable/main amd64 libjansi-java all 2.4.1-2 [100 kB] Get: 295 http://deb.debian.org/debian unstable/main amd64 libjsp-api-java all 2.3.4-3 [53.7 kB] Get: 296 http://deb.debian.org/debian unstable/main amd64 libqdox-java all 1.12.1-4 [173 kB] Get: 297 http://deb.debian.org/debian unstable/main amd64 libservlet-api-java all 4.0.1-2 [81.0 kB] Get: 298 http://deb.debian.org/debian unstable/main amd64 libxpp3-java all 1.1.4c-3 [292 kB] Get: 299 http://deb.debian.org/debian unstable/main amd64 libxstream-java all 1.4.21-1 [567 kB] Get: 300 http://deb.debian.org/debian unstable/main amd64 groovy all 2.4.21-10 [12.8 MB] Get: 301 http://deb.debian.org/debian unstable/main amd64 libatinject-jsr330-api-java all 1.0+ds1-5 [5312 B] Get: 302 http://deb.debian.org/debian unstable/main amd64 libcommons-collections3-java all 3.2.2-3 [530 kB] Get: 303 http://deb.debian.org/debian unstable/main amd64 libcommons-codec-java all 1.17.1-1 [303 kB] Get: 304 http://deb.debian.org/debian unstable/main amd64 libcommons-io-java all 2.17.0-1 [488 kB] Get: 305 http://deb.debian.org/debian unstable/main amd64 libcommons-compress-java all 1.27.1-2 [641 kB] Get: 306 http://deb.debian.org/debian unstable/main amd64 libcommons-lang-java all 2.6-10 [273 kB] Get: 307 http://deb.debian.org/debian unstable/main amd64 liberror-prone-java all 2.18.0-1 [22.5 kB] Get: 308 http://deb.debian.org/debian unstable/main amd64 libjsr305-java all 0.1~+svn49-11 [26.9 kB] Get: 309 http://deb.debian.org/debian unstable/main amd64 libguava-java all 32.0.1-1 [2708 kB] Get: 310 http://deb.debian.org/debian unstable/main amd64 libhttpcore-java all 4.4.16-1 [636 kB] Get: 311 http://deb.debian.org/debian unstable/main amd64 libhttpclient-java all 4.5.14-1 [1247 kB] Get: 312 http://deb.debian.org/debian unstable/main amd64 libjarjar-java all 1.4+svn142-12 [205 kB] Get: 313 http://deb.debian.org/debian unstable/main amd64 libjcip-annotations-java all 20060626-6 [11.8 kB] Get: 314 http://deb.debian.org/debian unstable/main amd64 libjna-jni amd64 5.15.0-1 [64.7 kB] Get: 315 http://deb.debian.org/debian unstable/main amd64 libjna-java all 5.15.0-1 [238 kB] Get: 316 http://deb.debian.org/debian unstable/main amd64 libbcprov-java all 1.77-1 [5300 kB] Get: 317 http://deb.debian.org/debian unstable/main amd64 libjunixsocket-jni amd64 2.6.1-1 [18.9 kB] Get: 318 http://deb.debian.org/debian unstable/main amd64 libeclipse-jdt-annotation-java all 2.2.700+eclipse4.29-2 [25.5 kB] Get: 319 http://deb.debian.org/debian unstable/main amd64 libjunixsocket-java all 2.6.1-1 [264 kB] Get: 320 http://deb.debian.org/debian unstable/main amd64 libgoogle-gson-java all 2.10.1-1 [262 kB] Get: 321 http://deb.debian.org/debian unstable/main amd64 liblightcouch-java all 0.2.0-1 [75.0 kB] Get: 322 http://deb.debian.org/debian unstable/main amd64 libmongodb-java all 3.6.3-2 [1901 kB] Get: 323 http://deb.debian.org/debian unstable/main amd64 liblog4j2-java all 2.19.0-2 [2310 kB] Get: 324 http://deb.debian.org/debian unstable/main amd64 libjzlib-java all 1.1.3-3 [79.4 kB] Get: 325 http://deb.debian.org/debian unstable/main amd64 libjsch-java all 0.2.19-1 [513 kB] Get: 326 http://deb.debian.org/debian unstable/main amd64 libminlog-java all 1.3.1-1 [7808 B] Get: 327 http://deb.debian.org/debian unstable/main amd64 libobjenesis-java all 3.3-3 [41.3 kB] Get: 328 http://deb.debian.org/debian unstable/main amd64 libreflectasm-java all 1.11.9+dfsg-4 [25.0 kB] Get: 329 http://deb.debian.org/debian unstable/main amd64 libkryo-java all 2.20-7 [158 kB] Get: 330 http://deb.debian.org/debian unstable/main amd64 liblogback-java all 1:1.2.11-5 [701 kB] Get: 331 http://deb.debian.org/debian unstable/main amd64 libnative-platform-jni amd64 0.14-6 [11.5 kB] Get: 332 http://deb.debian.org/debian unstable/main amd64 libnative-platform-java all 0.14-6 [69.8 kB] Get: 333 http://deb.debian.org/debian unstable/main amd64 libxml-commons-external-java all 1.4.01-6 [240 kB] Get: 334 http://deb.debian.org/debian unstable/main amd64 libxml-commons-resolver1.1-java all 1.2-11 [98.3 kB] Get: 335 http://deb.debian.org/debian unstable/main amd64 libxerces2-java all 2.12.2-1 [1440 kB] Get: 336 http://deb.debian.org/debian unstable/main amd64 libnekohtml-java all 1.9.22.noko2-0.1 [125 kB] Get: 337 http://deb.debian.org/debian unstable/main amd64 libxbean-reflect-java all 4.5-9 [132 kB] Get: 338 http://deb.debian.org/debian unstable/main amd64 libgradle-core-java all 4.4.1-20 [4293 kB] Get: 339 http://deb.debian.org/debian unstable/main amd64 libbcpg-java all 1.77-1 [428 kB] Get: 340 http://deb.debian.org/debian unstable/main amd64 libbsh-java all 2.0b4-20 [291 kB] Get: 341 http://deb.debian.org/debian unstable/main amd64 libdd-plist-java all 1.20-1.1 [72.6 kB] Get: 342 http://deb.debian.org/debian unstable/main amd64 libjaxen-java all 1.1.6-5 [214 kB] Get: 343 http://deb.debian.org/debian unstable/main amd64 libdom4j-java all 2.1.4-1 [312 kB] Get: 344 http://deb.debian.org/debian unstable/main amd64 libcommons-lang3-java all 3.17.0-1 [641 kB] Get: 345 http://deb.debian.org/debian unstable/main amd64 libbcel-java all 6.10.0-1 [674 kB] Get: 346 http://deb.debian.org/debian unstable/main amd64 libjformatstring-java all 0.10~20131207-2.1 [34.5 kB] Get: 347 http://deb.debian.org/debian unstable/main amd64 libfindbugs-java all 3.1.0~preview2-4 [3535 kB] Get: 348 http://deb.debian.org/debian unstable/main amd64 libaopalliance-java all 20070526-7 [8572 B] Get: 349 http://deb.debian.org/debian unstable/main amd64 libguice-java all 4.2.3-2 [1435 kB] Get: 350 http://deb.debian.org/debian unstable/main amd64 libjatl-java all 0.2.3-1.1 [29.0 kB] Get: 351 http://deb.debian.org/debian unstable/main amd64 libjcifs-java all 1.3.19-2 [394 kB] Get: 352 http://deb.debian.org/debian unstable/main amd64 libjavaewah-java all 1.2.3-1 [159 kB] Get: 353 http://deb.debian.org/debian unstable/main amd64 libel-api-java all 3.0.0-3 [64.9 kB] Get: 354 http://deb.debian.org/debian unstable/main amd64 libwebsocket-api-java all 1.1-2 [40.1 kB] Get: 355 http://deb.debian.org/debian unstable/main amd64 libjetty9-java all 9.4.56-1 [2964 kB] Get: 356 http://deb.debian.org/debian unstable/main amd64 libjgit-java all 6.7.0-2 [3152 kB] Get: 357 http://deb.debian.org/debian unstable/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 358 http://deb.debian.org/debian unstable/main amd64 libplexus-utils2-java all 3.4.2-1 [258 kB] Get: 359 http://deb.debian.org/debian unstable/main amd64 libwagon-provider-api-java all 3.5.3-1 [48.2 kB] Get: 360 http://deb.debian.org/debian unstable/main amd64 libmaven-resolver-java all 1.6.3-1 [548 kB] Get: 361 http://deb.debian.org/debian unstable/main amd64 libgeronimo-annotation-1.3-spec-java all 1.3-1 [11.1 kB] Get: 362 http://deb.debian.org/debian unstable/main amd64 libmaven-parent-java all 43-2 [6252 B] Get: 363 http://deb.debian.org/debian unstable/main amd64 libmaven-resolver-1.6-java all 1.6.3-2 [558 kB] Get: 364 http://deb.debian.org/debian unstable/main amd64 libmaven-shared-utils-java all 3.4.2-1 [137 kB] Get: 365 http://deb.debian.org/debian unstable/main amd64 libplexus-cipher-java all 2.0-1 [14.9 kB] Get: 366 http://deb.debian.org/debian unstable/main amd64 libplexus-classworlds-java all 2.7.0-1 [50.6 kB] Get: 367 http://deb.debian.org/debian unstable/main amd64 libplexus-component-annotations-java all 2.1.1-1 [7660 B] Get: 368 http://deb.debian.org/debian unstable/main amd64 libplexus-interpolation-java all 1.27-1 [76.8 kB] Get: 369 http://deb.debian.org/debian unstable/main amd64 libplexus-sec-dispatcher-java all 2.0-3 [28.3 kB] Get: 370 http://deb.debian.org/debian unstable/main amd64 libgeronimo-interceptor-3.0-spec-java all 1.0.1-4 [8484 B] Get: 371 http://deb.debian.org/debian unstable/main amd64 libcdi-api-java all 1.2-4 [55.3 kB] Get: 372 http://deb.debian.org/debian unstable/main amd64 libsisu-inject-java all 0.3.4-2 [347 kB] Get: 373 http://deb.debian.org/debian unstable/main amd64 libsisu-plexus-java all 0.3.4-3 [181 kB] Get: 374 http://deb.debian.org/debian unstable/main amd64 libmaven3-core-java all 3.8.8-2 [1579 kB] Get: 375 http://deb.debian.org/debian unstable/main amd64 libplexus-container-default-java all 2.1.1-1 [193 kB] Get: 376 http://deb.debian.org/debian unstable/main amd64 libpolyglot-maven-java all 0.8~tobrien+git20120905-10 [74.9 kB] Get: 377 http://deb.debian.org/debian unstable/main amd64 librhino-java all 1.7.15-1 [1382 kB] Get: 378 http://deb.debian.org/debian unstable/main amd64 libsimple-http-java all 4.1.21-1.1 [211 kB] Get: 379 http://deb.debian.org/debian unstable/main amd64 libwagon-file-java all 3.5.3-1 [8388 B] Get: 380 http://deb.debian.org/debian unstable/main amd64 libjsoup-java all 1.15.3-1 [431 kB] Get: 381 http://deb.debian.org/debian unstable/main amd64 libwagon-http-java all 3.5.3-1 [49.5 kB] Get: 382 http://deb.debian.org/debian unstable/main amd64 libjcommander-java all 1.71-4 [73.0 kB] Get: 383 http://deb.debian.org/debian unstable/main amd64 testng all 6.9.12-4 [795 kB] Get: 384 http://deb.debian.org/debian unstable/main amd64 libgradle-plugins-java all 4.4.1-20 [5206 kB] Get: 385 http://deb.debian.org/debian unstable/main amd64 gradle all 4.4.1-20 [398 kB] Get: 386 http://deb.debian.org/debian unstable/main amd64 maven-repo-helper all 1.11 [142 kB] Get: 387 http://deb.debian.org/debian unstable/main amd64 gradle-debian-helper all 2.4 [24.5 kB] Get: 388 http://deb.debian.org/debian unstable/main amd64 hunspell-en-us all 1:2020.12.07-3 [559 kB] Get: 389 http://deb.debian.org/debian unstable/main amd64 libdav1d7 amd64 1.5.0-1+b1 [550 kB] Get: 390 http://deb.debian.org/debian unstable/main amd64 librsvg2-2 amd64 2.59.1+dfsg-1 [1860 kB] Get: 391 http://deb.debian.org/debian unstable/main amd64 librsvg2-common amd64 2.59.1+dfsg-1 [147 kB] Get: 392 http://deb.debian.org/debian unstable/main amd64 libdouble-conversion3 amd64 3.3.0-1+b2 [41.8 kB] Get: 393 http://deb.debian.org/debian unstable/main amd64 libgslcblas0 amd64 2.8+dfsg-5 [116 kB] Get: 394 http://deb.debian.org/debian unstable/main amd64 libgsl28 amd64 2.8+dfsg-5 [994 kB] Get: 395 http://deb.debian.org/debian unstable/main amd64 lib2geom1.2.0t64 amd64 1.2.2-4+b1 [390 kB] Get: 396 http://deb.debian.org/debian unstable/main amd64 libglibmm-2.4-1t64 amd64 2.66.7-1+b1 [632 kB] Get: 397 http://deb.debian.org/debian unstable/main amd64 libatkmm-1.6-1v5 amd64 2.28.4-1+b2 [82.3 kB] Get: 398 http://deb.debian.org/debian unstable/main amd64 libboost-filesystem1.83.0 amd64 1.83.0-3.2+b1 [282 kB] Get: 399 http://deb.debian.org/debian unstable/main amd64 libcairomm-1.0-1v5 amd64 1.14.5-2+b1 [57.3 kB] Get: 400 http://deb.debian.org/debian unstable/main amd64 librevenge-0.0-0 amd64 0.0.5-3+b2 [295 kB] Get: 401 http://deb.debian.org/debian unstable/main amd64 libcdr-0.1-1 amd64 0.1.7-1+b2 [408 kB] Get: 402 http://deb.debian.org/debian unstable/main amd64 libgc1 amd64 1:8.2.8-1 [247 kB] Get: 403 http://deb.debian.org/debian unstable/main amd64 libgspell-1-common all 1.14.0-2 [36.5 kB] Get: 404 http://deb.debian.org/debian unstable/main amd64 libaspell15 amd64 0.60.8.1-1+b2 [337 kB] Get: 405 http://deb.debian.org/debian unstable/main amd64 libhunspell-1.7-0 amd64 1.7.2+really1.7.2-10+b3 [237 kB] Get: 406 http://deb.debian.org/debian unstable/main amd64 libenchant-2-2 amd64 2.3.3-2+b3 [47.9 kB] Get: 407 http://deb.debian.org/debian unstable/main amd64 libgspell-1-3 amd64 1.14.0-2 [51.1 kB] Get: 408 http://deb.debian.org/debian unstable/main amd64 libpangomm-1.4-1v5 amd64 2.46.4-1+b2 [63.0 kB] Get: 409 http://deb.debian.org/debian unstable/main amd64 libgtkmm-3.0-1t64 amd64 3.24.9-1+b1 [986 kB] Get: 410 http://deb.debian.org/debian unstable/main amd64 libgpgme11t64 amd64 1.24.0-2 [344 kB] Get: 411 http://deb.debian.org/debian unstable/main amd64 libgpgmepp6t64 amd64 1.24.0-2 [339 kB] Get: 412 http://deb.debian.org/debian unstable/main amd64 libopenjp2-7 amd64 2.5.0-2+b4 [199 kB] Get: 413 http://deb.debian.org/debian unstable/main amd64 libpoppler140 amd64 24.08.0-3 [1965 kB] Get: 414 http://deb.debian.org/debian unstable/main amd64 libpoppler-glib8t64 amd64 24.08.0-3 [149 kB] Get: 415 http://deb.debian.org/debian unstable/main amd64 libpotrace0 amd64 1.16-2+b2 [25.6 kB] Get: 416 http://deb.debian.org/debian unstable/main amd64 libsoup2.4-common all 2.74.3-8 [56.8 kB] Get: 417 http://deb.debian.org/debian unstable/main amd64 libsoup-2.4-1 amd64 2.74.3-8 [276 kB] Get: 418 http://deb.debian.org/debian unstable/main amd64 libvisio-0.1-1 amd64 0.1.7-1+b4 [316 kB] Get: 419 http://deb.debian.org/debian unstable/main amd64 libwpd-0.10-10 amd64 0.10.3-2+b2 [263 kB] Get: 420 http://deb.debian.org/debian unstable/main amd64 libwpg-0.3-3 amd64 0.3.4-3+b2 [81.3 kB] Get: 421 http://deb.debian.org/debian unstable/main amd64 libxslt1.1 amd64 1.1.35-1.1+b1 [233 kB] Get: 422 http://deb.debian.org/debian unstable/main amd64 inkscape amd64 1.2.2-4+b3 [21.1 MB] Get: 423 http://deb.debian.org/debian unstable/main amd64 jarwrapper all 0.80 [9692 B] Get: 424 http://deb.debian.org/debian unstable/main amd64 javahelper all 0.80 [80.4 kB] Get: 425 http://deb.debian.org/debian unstable/main amd64 libapiguardian-java all 1.1.2-1 [4656 B] Get: 426 http://deb.debian.org/debian unstable/main amd64 libopentest4j-java all 1.2.0-4 [9516 B] Get: 427 http://deb.debian.org/debian unstable/main amd64 libopentest4j-reporting-java all 0.1.0-M1-2 [49.0 kB] Get: 428 http://deb.debian.org/debian unstable/main amd64 libpicocli-java all 4.6.2-2 [390 kB] Get: 429 http://deb.debian.org/debian unstable/main amd64 libunivocity-parsers-java all 2.9.1-1 [397 kB] Get: 430 http://deb.debian.org/debian unstable/main amd64 junit5 all 5.10.3-1 [2459 kB] Get: 431 http://deb.debian.org/debian unstable/main amd64 libjaxp1.3-java all 1.3.05-6 [227 kB] Get: 432 http://deb.debian.org/debian unstable/main amd64 libxmlgraphics-commons-java all 2.10-1 [628 kB] Get: 433 http://deb.debian.org/debian unstable/main amd64 libbatik-java all 1.18+dfsg-2 [3940 kB] Get: 434 http://deb.debian.org/debian unstable/main amd64 libcolt-free-java all 1.2.0+dfsg-8 [440 kB] Get: 435 http://deb.debian.org/debian unstable/main amd64 libcommons-beanutils-java all 1.9.4-2 [233 kB] Get: 436 http://deb.debian.org/debian unstable/main amd64 libcommons-configuration-java all 1.10-7 [348 kB] Get: 437 http://deb.debian.org/debian unstable/main amd64 libcommons-jexl2-java all 2.1.1-6 [256 kB] Get: 438 http://deb.debian.org/debian unstable/main amd64 libcommons-math3-java all 3.6.1-3 [2018 kB] Get: 439 http://deb.debian.org/debian unstable/main amd64 libfastutil-java all 8.5.15+dfsg-1 [20.0 MB] Get: 440 http://deb.debian.org/debian unstable/main amd64 libjsap-java all 2.1-5 [102 kB] Get: 441 http://deb.debian.org/debian unstable/main amd64 libdsiutils-java all 2.7.3+dfsg-1 [524 kB] Get: 442 http://deb.debian.org/debian unstable/main amd64 libfest-util-java all 1.2.5-2 [31.8 kB] Get: 443 http://deb.debian.org/debian unstable/main amd64 libfest-assert-java all 2.0~M10-1.1 [237 kB] Get: 444 http://deb.debian.org/debian unstable/main amd64 libfest-reflect-java all 1.4.1-4 [41.6 kB] Get: 445 http://deb.debian.org/debian unstable/main amd64 libgtk2.0-common all 2.24.33-6 [2662 kB] Get: 446 http://deb.debian.org/debian unstable/main amd64 libgtk2.0-0t64 amd64 2.24.33-6 [1828 kB] Get: 447 http://deb.debian.org/debian unstable/main amd64 libmjson-java all 1.4.0-3 [60.4 kB] Get: 448 http://deb.debian.org/debian unstable/main amd64 libmbedcrypto16 amd64 3.6.2-3 [355 kB] Get: 449 http://deb.debian.org/debian unstable/main amd64 libmbedx509-7 amd64 3.6.2-3 [147 kB] Get: 450 http://deb.debian.org/debian unstable/main amd64 libmbedtls21 amd64 3.6.2-3 [234 kB] Get: 451 http://deb.debian.org/debian unstable/main amd64 ncbi-vdb-data all 3.0.9+dfsg-2 [74.0 kB] Get: 452 http://deb.debian.org/debian unstable/main amd64 libncbi-vdb3 amd64 3.0.9+dfsg-2 [1189 kB] Get: 453 http://deb.debian.org/debian unstable/main amd64 libncbi-ngs3 amd64 3.0.9+dfsg-7 [157 kB] Get: 454 http://deb.debian.org/debian unstable/main amd64 libngs-jni amd64 3.0.9+dfsg-7 [25.6 kB] Get: 455 http://deb.debian.org/debian unstable/main amd64 libngs-java amd64 3.0.9+dfsg-7 [112 kB] Get: 456 http://deb.debian.org/debian unstable/main amd64 libsnappy1v5 amd64 1.2.1-1+b1 [29.6 kB] Get: 457 http://deb.debian.org/debian unstable/main amd64 libsnappy-jni amd64 1.1.10.7-1 [6492 B] Get: 458 http://deb.debian.org/debian unstable/main amd64 libsnappy-java all 1.1.10.7-1 [87.6 kB] Get: 459 http://deb.debian.org/debian unstable/main amd64 libhtsjdk-java all 4.1.0+dfsg-2 [1833 kB] Get: 460 http://deb.debian.org/debian unstable/main amd64 libicu4j-java all 73.2-1 [16.4 MB] Get: 461 http://deb.debian.org/debian unstable/main amd64 liblog4j1.2-java all 1.2.17-11 [444 kB] Get: 462 http://deb.debian.org/debian unstable/main amd64 libicb-utils-java all 2.0.1+git20161002.afee1d9-5 [81.5 kB] Get: 463 http://deb.debian.org/debian unstable/main amd64 libjide-oss-java all 3.7.6+dfsg-2 [1490 kB] Get: 464 http://deb.debian.org/debian unstable/main amd64 libnb-absolutelayout-java all 12.1-3 [12.5 kB] Get: 465 http://deb.debian.org/debian unstable/main amd64 libopenjfx-jni amd64 11.0.11+1-4 [22.7 MB] Get: 466 http://deb.debian.org/debian unstable/main amd64 libopenjfx-java all 11.0.11+1-4 [8941 kB] Get: 467 http://deb.debian.org/debian unstable/main amd64 libprotobuf-java all 3.21.12-10 [1268 kB] Get: 468 http://deb.debian.org/debian unstable/main amd64 libswing-layout-java all 1.0.4-4.1 [44.4 kB] Get: 469 http://deb.debian.org/debian unstable/main amd64 openjfx amd64 11.0.11+1-4 [6652 B] Fetched 455 MB in 7s (69.1 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libapparmor1:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19966 files and directories currently installed.) Preparing to unpack .../libapparmor1_3.1.7-1+b3_amd64.deb ... Unpacking libapparmor1:amd64 (3.1.7-1+b3) ... Selecting previously unselected package libsystemd-shared:amd64. Preparing to unpack .../libsystemd-shared_257~rc2-3_amd64.deb ... Unpacking libsystemd-shared:amd64 (257~rc2-3) ... Selecting previously unselected package systemd. Preparing to unpack .../systemd_257~rc2-3_amd64.deb ... Unpacking systemd (257~rc2-3) ... Setting up libapparmor1:amd64 (3.1.7-1+b3) ... Setting up libsystemd-shared:amd64 (257~rc2-3) ... Setting up systemd (257~rc2-3) ... Created symlink '/etc/systemd/system/getty.target.wants/getty@tty1.service' -> '/usr/lib/systemd/system/getty@.service'. Created symlink '/etc/systemd/system/multi-user.target.wants/remote-fs.target' -> '/usr/lib/systemd/system/remote-fs.target'. Created symlink '/etc/systemd/system/sysinit.target.wants/systemd-pstore.service' -> '/usr/lib/systemd/system/systemd-pstore.service'. Initializing machine ID from random generator. Creating group 'systemd-journal' with GID 999. Creating group 'systemd-network' with GID 998. Creating user 'systemd-network' (systemd Network Management) with UID 998 and GID 998. /usr/lib/tmpfiles.d/legacy.conf:13: Duplicate line for path "/run/lock", ignoring. Selecting previously unselected package systemd-sysv. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20922 files and directories currently installed.) Preparing to unpack .../00-systemd-sysv_257~rc2-3_amd64.deb ... Unpacking systemd-sysv (257~rc2-3) ... Selecting previously unselected package libdbus-1-3:amd64. Preparing to unpack .../01-libdbus-1-3_1.14.10-6_amd64.deb ... Unpacking libdbus-1-3:amd64 (1.14.10-6) ... Selecting previously unselected package dbus-bin. Preparing to unpack .../02-dbus-bin_1.14.10-6_amd64.deb ... 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Setting up libosgi-core-java (8.0.0-2) ... Setting up libx11-xcb1:amd64 (2:1.8.10-2) ... Setting up libhttp-date-perl (6.06-1) ... Setting up libxstream-java (1.4.21-1) ... Setting up libnekohtml-java (1.9.22.noko2-0.1) ... Setting up gettext (0.22.5-2) ... Setting up libjetty9-java (9.4.56-1) ... Setting up libxdamage1:amd64 (1:1.1.6-1+b2) ... Setting up java-wrappers (0.5) ... Setting up libatk1.0-0t64:amd64 (2.54.0-1) ... Setting up libfile-listing-perl (6.16-1) ... Setting up libosgi-compendium-java (7.0.0-1) ... Setting up libxrender1:amd64 (1:0.9.10-1.1+b2) ... Setting up jarwrapper (0.80) ... Setting up dictionaries-common (1.30.1) ... Setting up libtool (2.4.7-8) ... Setting up fontconfig-config (2.15.0-1.1+b1) ... Setting up libmaven-parent-java (43-2) ... Setting up libcommons-parent-java (56-1) ... Setting up libavahi-common3:amd64 (0.8-13+b3) ... Setting up libcloudproviders0:amd64 (0.3.6-1+b1) ... Setting up libcommons-logging-java (1.3.0-1) ... Setting up libxext6:amd64 (2:1.3.4-1+b2) ... Setting up libnet-http-perl (6.23-1) ... Setting up libsisu-inject-java (0.3.4-2) ... Setting up libnss3:amd64 (2:3.106-1) ... Setting up dbus-daemon (1.14.10-6) ... Setting up libcdr-0.1-1:amd64 (0.1.7-1+b2) ... Setting up libdevel-callchecker-perl:amd64 (0.009-1+b1) ... Setting up libcommons-lang-java (2.6-10) ... Setting up libjunixsocket-java (2.6.1-1) ... Setting up libldap-2.5-0:amd64 (2.5.18+dfsg-3+b1) ... Setting up libcolord2:amd64 (1.4.7-1+b2) ... Setting up libplexus-cipher-java (2.0-1) ... Setting up libxxf86vm1:amd64 (1:1.1.4-1+b3) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libdconf1:amd64 (0.40.0-4+b3) ... Setting up libglibmm-2.4-1t64:amd64 (2.66.7-1+b1) ... Setting up dh-autoreconf (20) ... Setting up patchutils (0.4.2-1) ... Setting up libcommons-jexl2-java (2.1.1-6) ... Setting up libthai0:amd64 (0.1.29-2+b1) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up libsisu-plexus-java (0.3.4-3) ... Setting up libmbedx509-7:amd64 (3.6.2-3) ... Setting up libfreetype6:amd64 (2.13.3+dfsg-1) ... Setting up libxfixes3:amd64 (1:6.0.0-2+b2) ... Setting up testng (6.9.12-4) ... Setting up dbus (1.14.10-6) ... Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of start. Setting up shared-mime-info (2.4-5+b1) ... Setting up libxinerama1:amd64 (2:1.1.4-3+b2) ... Setting up libgssapi-krb5-2:amd64 (1.21.3-3) ... Setting up libxrandr2:amd64 (2:1.5.4-1+b1) ... Setting up libcommons-lang3-java (3.17.0-1) ... Setting up libmbedtls21:amd64 (3.6.2-3) ... Setting up libwpg-0.3-3:amd64 (0.3.4-3+b2) ... Setting up libreadline8t64:amd64 (8.2-5) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up libfelix-resolver-java (1.16.0-1) ... Setting up libdrm2:amd64 (2.4.123-1) ... Setting up libjansi-native-java (1.8-2) ... Setting up groff-base (1.23.0-5) ... Setting up libwayland-cursor0:amd64 (1.23.0-1+b1) ... Setting up libhtml-parser-perl:amd64 (3.83-1+b1) ... Setting up libxslt1.1:amd64 (1.1.35-1.1+b1) ... Setting up gpgconf (2.2.45-2) ... Setting up hunspell-en-us (1:2020.12.07-3) ... Setting up libpam-systemd:amd64 (257~rc2-3) ... Setting up libcommons-beanutils-java (1.9.4-2) ... Setting up libjansi1-java (1.18-3) ... Setting up libplexus-sec-dispatcher-java (2.0-3) ... Setting up libharfbuzz0b:amd64 (10.0.1-1) ... Setting up libgdk-pixbuf-2.0-0:amd64 (2.42.12+dfsg-1+b1) ... Setting up libsnappy-java (1.1.10.7-1) ... Setting up libfontconfig1:amd64 (2.15.0-1.1+b1) ... Setting up libatkmm-1.6-1v5:amd64 (2.28.4-1+b2) ... Setting up ca-certificates-java (20240118) ... No JRE found. Skipping Java certificates setup. Setting up libcommons-configuration-java (1.10-7) ... Setting up libwagon-file-java (3.5.3-1) ... Setting up libcommons-codec-java (1.17.1-1) ... Setting up libjline2-java (2.14.6-5) ... Setting up libavahi-client3:amd64 (0.8-13+b3) ... Setting up libio-socket-ssl-perl (2.089-1) ... Setting up gpg (2.2.45-2) ... Setting up libhttp-message-perl (7.00-2) ... Setting up libdrm-amdgpu1:amd64 (2.4.123-1) ... Setting up gtk-update-icon-cache (4.16.5+ds-2) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up fontconfig (2.15.0-1.1+b1) ... Regenerating fonts cache... done. Setting up gpg-agent (2.2.45-2) ... Created symlink '/etc/systemd/user/sockets.target.wants/gpg-agent-browser.socket' -> '/usr/lib/systemd/user/gpg-agent-browser.socket'. Created symlink '/etc/systemd/user/sockets.target.wants/gpg-agent-extra.socket' -> '/usr/lib/systemd/user/gpg-agent-extra.socket'. Created symlink '/etc/systemd/user/sockets.target.wants/gpg-agent-ssh.socket' -> '/usr/lib/systemd/user/gpg-agent-ssh.socket'. Created symlink '/etc/systemd/user/sockets.target.wants/gpg-agent.socket' -> '/usr/lib/systemd/user/gpg-agent.socket'. Setting up openjdk-21-jre-headless:amd64 (21.0.5+11-1) ... update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/java to provide /usr/bin/java (java) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jpackage to provide /usr/bin/jpackage (jpackage) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode Setting up libxi6:amd64 (2:1.8.2-1) ... Setting up libtirpc3t64:amd64 (1.3.4+ds-1.3+b1) ... Setting up libhttp-cookies-perl (6.11-1) ... Setting up libenchant-2-2:amd64 (2.3.3-2+b3) ... Setting up libcommons-io-java (2.17.0-1) ... Setting up libdrm-radeon1:amd64 (2.4.123-1) ... Setting up libxtst6:amd64 (2:1.2.3-1.1+b2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up libxcursor1:amd64 (1:1.2.2-1+b1) ... Setting up libparams-classify-perl:amd64 (0.015-2+b4) ... Setting up gpgsm (2.2.45-2) ... Setting up libpango-1.0-0:amd64 (1.54.0+ds-3) ... Setting up libdrm-intel1:amd64 (2.4.123-1) ... Setting up libncbi-vdb3:amd64 (3.0.9+dfsg-2) ... Setting up libcurl3t64-gnutls:amd64 (8.11.0-1) ... Setting up libxmlgraphics-commons-java (2.10-1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Created symlink '/etc/systemd/system/timers.target.wants/man-db.timer' -> '/usr/lib/systemd/system/man-db.timer'. Setting up libcairo2:amd64 (1.18.2-2) ... Setting up lib2geom1.2.0t64:amd64 (1.2.2-4+b1) ... Setting up libmaven-resolver-1.6-java (1.6.3-2) ... Setting up libcairomm-1.0-1v5:amd64 (1.14.5-2+b1) ... Setting up dirmngr (2.2.45-2) ... Created symlink '/etc/systemd/user/sockets.target.wants/dirmngr.socket' -> '/usr/lib/systemd/user/dirmngr.socket'. Setting up dbus-user-session (1.14.10-6) ... Setting up libmaven-resolver-java (1.6.3-1) ... Setting up libbcel-java (6.10.0-1) ... Setting up adwaita-icon-theme (47.0-2) ... update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode Setting up libmodule-runtime-perl (0.016-2) ... Setting up libatspi2.0-0t64:amd64 (2.54.0-1) ... Setting up libhttpclient-java (4.5.14-1) ... Setting up libnsl2:amd64 (1.3.0-3+b3) ... Setting up gnupg (2.2.45-2) ... Setting up liblightcouch-java (0.2.0-1) ... Setting up libwagon-http-java (3.5.3-1) ... Setting up libcairo-gobject2:amd64 (1.18.2-2) ... Setting up libmaven-shared-utils-java (3.4.2-1) ... Setting up libgpgme11t64:amd64 (1.24.0-2) ... Setting up libpangoft2-1.0-0:amd64 (1.54.0+ds-3) ... Setting up libcups2t64:amd64 (2.4.10-2) ... Setting up libpangocairo-1.0-0:amd64 (1.54.0+ds-3) ... Setting up libncbi-ngs3:amd64 (3.0.9+dfsg-7) ... Setting up libatk-bridge2.0-0t64:amd64 (2.54.0-1) ... Setting up libgpgmepp6t64:amd64 (1.24.0-2) ... Setting up mesa-libgallium:amd64 (24.2.7-1) ... Setting up libngs-jni:amd64 (3.0.9+dfsg-7) ... Setting up libproxy1v5:amd64 (0.5.9-1) ... Setting up libfindbugs-java (3.1.0~preview2-4) ... Setting up libpython3.12-stdlib:amd64 (3.12.7-3) ... Setting up libcommons-compress-java (1.27.1-2) ... Setting up libgbm1:amd64 (24.2.7-1) ... Setting up libimport-into-perl (1.002005-2) ... Setting up libbatik-java (1.18+dfsg-2) ... Setting up libmoo-perl (2.005005-1) ... Setting up liblog4j2-java (2.19.0-2) ... Setting up python3.12 (3.12.7-3) ... Setting up libgl1-mesa-dri:amd64 (24.2.7-1) ... Setting up debhelper (13.20) ... Setting up dconf-service (0.40.0-4+b3) ... Setting up librsvg2-2:amd64 (2.59.1+dfsg-1) ... Setting up libjsch-java (0.2.19-1) ... Setting up libgtk2.0-0t64:amd64 (2.24.33-6) ... Setting up librsvg2-common:amd64 (2.59.1+dfsg-1) ... Setting up libpangomm-1.4-1v5:amd64 (2.46.4-1+b2) ... Setting up libpoppler140:amd64 (24.08.0-3) ... Setting up libngs-java:amd64 (3.0.9+dfsg-7) ... Setting up libhtsjdk-java (4.1.0+dfsg-2) ... Setting up libpython3-stdlib:amd64 (3.12.7-1) ... Setting up glib-networking-services (2.80.0-1) ... Setting up libjgit-java (6.7.0-2) ... Setting up libglx-mesa0:amd64 (24.2.7-1) ... Setting up libglx0:amd64 (1.7.0-1+b2) ... Setting up dconf-gsettings-backend:amd64 (0.40.0-4+b3) ... Setting up python3 (3.12.7-1) ... Setting up libpoppler-glib8t64:amd64 (24.08.0-3) ... Setting up libgl1:amd64 (1.7.0-1+b2) ... Setting up libgtk-3-common (3.24.43-4) ... Setting up gsettings-desktop-schemas (47.1-1) ... Setting up libgtk-3-0t64:amd64 (3.24.43-4) ... Setting up libgtkmm-3.0-1t64:amd64 (3.24.9-1+b1) ... Setting up libopenjfx-jni (11.0.11+1-4) ... Setting up glib-networking:amd64 (2.80.0-1) ... Setting up libgspell-1-3:amd64 (1.14.0-2) ... Setting up libopenjfx-java (11.0.11+1-4) ... Setting up openjfx (11.0.11+1-4) ... Setting up libsoup-2.4-1:amd64 (2.74.3-8) ... Setting up inkscape (1.2.2-4+b3) ... Setting up liberror-prone-java (2.18.0-1) ... Setting up libwww-perl (6.77-1) ... Setting up devscripts (2.24.3) ... Setting up libguava-java (32.0.1-1) ... Setting up javahelper (0.80) ... Setting up libprotobuf-java (3.21.12-10) ... Setting up libplexus-container-default-java (2.1.1-1) ... Setting up liblwp-protocol-https-perl (6.14-1) ... Setting up libguice-java (4.2.3-2) ... Setting up libmaven3-core-java (3.8.8-2) ... Processing triggers for libc-bin (2.40-3) ... Processing triggers for systemd (257~rc2-3) ... Processing triggers for ca-certificates-java (20240118) ... Adding debian:ACCVRAIZ1.pem Adding debian:AC_RAIZ_FNMT-RCM.pem Adding debian:AC_RAIZ_FNMT-RCM_SERVIDORES_SEGUROS.pem Adding debian:ANF_Secure_Server_Root_CA.pem Adding debian:Actalis_Authentication_Root_CA.pem Adding debian:AffirmTrust_Commercial.pem Adding debian:AffirmTrust_Networking.pem Adding debian:AffirmTrust_Premium.pem Adding debian:AffirmTrust_Premium_ECC.pem Adding debian:Amazon_Root_CA_1.pem Adding debian:Amazon_Root_CA_2.pem Adding debian:Amazon_Root_CA_3.pem Adding debian:Amazon_Root_CA_4.pem Adding debian:Atos_TrustedRoot_2011.pem Adding debian:Atos_TrustedRoot_Root_CA_ECC_TLS_2021.pem Adding debian:Atos_TrustedRoot_Root_CA_RSA_TLS_2021.pem Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem Adding debian:BJCA_Global_Root_CA1.pem Adding debian:BJCA_Global_Root_CA2.pem Adding debian:Baltimore_CyberTrust_Root.pem Adding debian:Buypass_Class_2_Root_CA.pem Adding debian:Buypass_Class_3_Root_CA.pem Adding debian:CA_Disig_Root_R2.pem Adding debian:CFCA_EV_ROOT.pem Adding debian:COMODO_Certification_Authority.pem Adding debian:COMODO_ECC_Certification_Authority.pem Adding debian:COMODO_RSA_Certification_Authority.pem Adding debian:Certainly_Root_E1.pem Adding debian:Certainly_Root_R1.pem Adding debian:Certigna.pem Adding debian:Certigna_Root_CA.pem Adding debian:Certum_EC-384_CA.pem Adding debian:Certum_Trusted_Network_CA.pem Adding debian:Certum_Trusted_Network_CA_2.pem Adding debian:Certum_Trusted_Root_CA.pem Adding debian:CommScope_Public_Trust_ECC_Root-01.pem Adding debian:CommScope_Public_Trust_ECC_Root-02.pem Adding debian:CommScope_Public_Trust_RSA_Root-01.pem Adding debian:CommScope_Public_Trust_RSA_Root-02.pem Adding debian:Comodo_AAA_Services_root.pem Adding debian:D-TRUST_BR_Root_CA_1_2020.pem Adding debian:D-TRUST_EV_Root_CA_1_2020.pem Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem Adding debian:DigiCert_Assured_ID_Root_CA.pem Adding debian:DigiCert_Assured_ID_Root_G2.pem Adding debian:DigiCert_Assured_ID_Root_G3.pem Adding debian:DigiCert_Global_Root_CA.pem Adding debian:DigiCert_Global_Root_G2.pem Adding debian:DigiCert_Global_Root_G3.pem Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem Adding debian:DigiCert_TLS_ECC_P384_Root_G5.pem Adding debian:DigiCert_TLS_RSA4096_Root_G5.pem Adding debian:DigiCert_Trusted_Root_G4.pem Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem Adding debian:Entrust_Root_Certification_Authority.pem Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem Adding debian:Entrust_Root_Certification_Authority_-_G2.pem Adding debian:Entrust_Root_Certification_Authority_-_G4.pem Adding debian:GDCA_TrustAUTH_R5_ROOT.pem Adding debian:GLOBALTRUST_2020.pem Adding debian:GTS_Root_R1.pem Adding debian:GTS_Root_R2.pem Adding debian:GTS_Root_R3.pem Adding debian:GTS_Root_R4.pem Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem Adding debian:GlobalSign_Root_CA.pem Adding debian:GlobalSign_Root_CA_-_R3.pem Adding debian:GlobalSign_Root_CA_-_R6.pem Adding debian:GlobalSign_Root_E46.pem Adding debian:GlobalSign_Root_R46.pem Adding debian:Go_Daddy_Class_2_CA.pem Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem Adding debian:HARICA_TLS_ECC_Root_CA_2021.pem Adding debian:HARICA_TLS_RSA_Root_CA_2021.pem Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem Adding debian:HiPKI_Root_CA_-_G1.pem Adding debian:Hongkong_Post_Root_CA_3.pem Adding debian:ISRG_Root_X1.pem Adding debian:ISRG_Root_X2.pem Adding debian:IdenTrust_Commercial_Root_CA_1.pem Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem Adding debian:Izenpe.com.pem Adding debian:Microsec_e-Szigno_Root_CA_2009.pem Adding debian:Microsoft_ECC_Root_Certificate_Authority_2017.pem Adding debian:Microsoft_RSA_Root_Certificate_Authority_2017.pem Adding debian:NAVER_Global_Root_Certification_Authority.pem Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem Adding debian:QuoVadis_Root_CA_1_G3.pem Adding debian:QuoVadis_Root_CA_2.pem Adding debian:QuoVadis_Root_CA_2_G3.pem Adding debian:QuoVadis_Root_CA_3.pem Adding debian:QuoVadis_Root_CA_3_G3.pem Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem Adding debian:SSL.com_Root_Certification_Authority_ECC.pem Adding debian:SSL.com_Root_Certification_Authority_RSA.pem Adding debian:SSL.com_TLS_ECC_Root_CA_2022.pem Adding debian:SSL.com_TLS_RSA_Root_CA_2022.pem Adding debian:SZAFIR_ROOT_CA2.pem Adding debian:Sectigo_Public_Server_Authentication_Root_E46.pem Adding debian:Sectigo_Public_Server_Authentication_Root_R46.pem Adding debian:SecureSign_RootCA11.pem Adding debian:SecureTrust_CA.pem Adding debian:Secure_Global_CA.pem Adding debian:Security_Communication_ECC_RootCA1.pem Adding debian:Security_Communication_RootCA2.pem Adding debian:Security_Communication_RootCA3.pem Adding debian:Security_Communication_Root_CA.pem Adding debian:Starfield_Class_2_CA.pem Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem Adding debian:SwissSign_Gold_CA_-_G2.pem Adding debian:SwissSign_Silver_CA_-_G2.pem Adding debian:T-TeleSec_GlobalRoot_Class_2.pem Adding debian:T-TeleSec_GlobalRoot_Class_3.pem Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem Adding debian:TWCA_Global_Root_CA.pem Adding debian:TWCA_Root_Certification_Authority.pem Adding debian:TeliaSonera_Root_CA_v1.pem Adding debian:Telia_Root_CA_v2.pem Adding debian:TrustAsia_Global_Root_CA_G3.pem Adding debian:TrustAsia_Global_Root_CA_G4.pem Adding debian:Trustwave_Global_Certification_Authority.pem Adding debian:Trustwave_Global_ECC_P256_Certification_Authority.pem Adding debian:Trustwave_Global_ECC_P384_Certification_Authority.pem Adding debian:TunTrust_Root_CA.pem Adding debian:UCA_Extended_Validation_Root.pem Adding debian:UCA_Global_G2_Root.pem Adding debian:USERTrust_ECC_Certification_Authority.pem Adding debian:USERTrust_RSA_Certification_Authority.pem Adding debian:XRamp_Global_CA_Root.pem Adding debian:certSIGN_ROOT_CA.pem Adding debian:certSIGN_Root_CA_G2.pem Adding debian:e-Szigno_Root_CA_2017.pem Adding debian:ePKI_Root_Certification_Authority.pem Adding debian:emSign_ECC_Root_CA_-_C3.pem Adding debian:emSign_ECC_Root_CA_-_G3.pem Adding debian:emSign_Root_CA_-_C1.pem Adding debian:emSign_Root_CA_-_G1.pem Adding debian:vTrus_ECC_Root_CA.pem Adding debian:vTrus_Root_CA.pem done. Setting up antlr (2.7.7+dfsg-14) ... Setting up openjdk-21-jre:amd64 (21.0.5+11-1) ... Setting up ivy (2.5.2-1) ... Setting up ant (1.10.15-1) ... Setting up junit4 (4.13.2-5) ... Setting up groovy (2.4.21-10) ... update-alternatives: using /usr/share/groovy/bin/groovy to provide /usr/bin/groovy (groovy) in auto mode update-alternatives: using /usr/share/groovy/bin/groovyc to provide /usr/bin/groovyc (groovyc) in auto mode update-alternatives: using /usr/share/groovy/bin/grape to provide /usr/bin/grape (grape) in auto mode update-alternatives: using /usr/share/groovy/bin/startGroovy to provide /usr/bin/startGroovy (startGroovy) in auto mode update-alternatives: using /usr/share/groovy/bin/groovysh to provide /usr/bin/groovysh (groovysh) in auto mode update-alternatives: using /usr/share/groovy/bin/java2groovy to provide /usr/bin/java2groovy (java2groovy) in auto mode update-alternatives: using /usr/share/groovy/bin/groovyConsole to provide /usr/bin/groovyConsole (groovyConsole) in auto mode update-alternatives: using /usr/share/groovy/bin/groovydoc to provide /usr/bin/groovydoc (groovydoc) in auto mode Setting up openjdk-21-jdk-headless:amd64 (21.0.5+11-1) ... update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jar to provide /usr/bin/jar (jar) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jarsigner to provide /usr/bin/jarsigner (jarsigner) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/javac to provide /usr/bin/javac (javac) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/javadoc to provide /usr/bin/javadoc (javadoc) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/javap to provide /usr/bin/javap (javap) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jcmd to provide /usr/bin/jcmd (jcmd) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jdb to provide /usr/bin/jdb (jdb) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jdeprscan to provide /usr/bin/jdeprscan (jdeprscan) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jdeps to provide /usr/bin/jdeps (jdeps) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jfr to provide /usr/bin/jfr (jfr) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jimage to provide /usr/bin/jimage (jimage) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jinfo to provide /usr/bin/jinfo (jinfo) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jlink to provide /usr/bin/jlink (jlink) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jmap to provide /usr/bin/jmap (jmap) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jmod to provide /usr/bin/jmod (jmod) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jps to provide /usr/bin/jps (jps) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jrunscript to provide /usr/bin/jrunscript (jrunscript) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jshell to provide /usr/bin/jshell (jshell) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jstack to provide /usr/bin/jstack (jstack) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jstat to provide /usr/bin/jstat (jstat) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jstatd to provide /usr/bin/jstatd (jstatd) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jwebserver to provide /usr/bin/jwebserver (jwebserver) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/serialver to provide /usr/bin/serialver (serialver) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jhsdb to provide /usr/bin/jhsdb (jhsdb) in auto mode Setting up default-jre-headless (2:1.21-76) ... Setting up maven-repo-helper (1.11) ... Setting up default-jre (2:1.21-76) ... Setting up ant-optional (1.10.15-1) ... Setting up libfest-util-java (1.2.5-2) ... Setting up openjdk-21-jdk:amd64 (21.0.5+11-1) ... update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jconsole to provide /usr/bin/jconsole (jconsole) in auto mode Setting up bnd (5.0.1-5) ... Setting up default-jdk-headless (2:1.21-76) ... Setting up libjsap-java (2.1-5) ... Setting up libgradle-core-java (4.4.1-20) ... Setting up libgradle-plugins-java (4.4.1-20) ... Setting up libfest-reflect-java (1.4.1-4) ... Setting up libdsiutils-java (2.7.3+dfsg-1) ... Setting up junit5 (5.10.3-1) ... Setting up gradle (4.4.1-20) ... Setting up libfest-assert-java (2.0~M10-1.1) ... Setting up default-jdk (2:1.21-76) ... Setting up libicb-utils-java (2.0.1+git20161002.afee1d9-5) ... Setting up gradle-debian-helper (2.4) ... Processing triggers for dictionaries-common (1.30.1) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Processing triggers for libgdk-pixbuf-2.0-0:amd64 (2.42.12+dfsg-1+b1) ... Processing triggers for ca-certificates-java (20240118) ... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/igv-2.18.5+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../igv_2.18.5+dfsg-1_source.changes dpkg-buildpackage: info: source package igv dpkg-buildpackage: info: source version 2.18.5+dfsg-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Pierre Gruet dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --buildsystem=gradle --with javahelper dh_auto_clean -O--buildsystem=gradle sh -c "find . -wholename .*build/tmp | xargs echo | sed -e 's^build/tmp^build^g' | xargs rm -Rf" sh -c "find . -wholename .*build/debian | xargs echo | sed -e 's^build/tmp^build^g' | xargs rm -Rf" rm -Rf /build/reproducible-path/igv-2.18.5\+dfsg/.gradle /build/reproducible-path/igv-2.18.5\+dfsg/buildSrc/.gradle .m2 dh_autoreconf_clean -O--buildsystem=gradle jh_clean -O--buildsystem=gradle Duplicate specification "u=s" for option "u" Duplicate specification "u=s" for option "u" debian/rules override_dh_clean make[1]: Entering directory '/build/reproducible-path/igv-2.18.5+dfsg' if [ -e src/main/resources/log4j.xml ] ; then rm src/main/resources/log4j.xml ; fi if [ -e src/main/resources-icons ]; then \ rm -rf src/main/resources-icons ; \ fi rm -rf .java dh_clean make[1]: Leaving directory '/build/reproducible-path/igv-2.18.5+dfsg' debian/rules binary dh binary --buildsystem=gradle --with javahelper dh_update_autotools_config -O--buildsystem=gradle dh_autoreconf -O--buildsystem=gradle debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/igv-2.18.5+dfsg' cp debian/log4j.xml src/main/resources/ # Converting my home-made svg icons into png ones cd debian/icons && \ inkscape -o Home24.png Home24.svg && \ inkscape -o Refresh24.png Refresh24.svg && \ inkscape -o Stop16.png Stop16.svg && \ inkscape -o ZoomIn24.png ZoomIn24.svg && \ inkscape -o ZoomOut24.png ZoomOut24.svg && \ mkdir ../../src/main/resources-icons && \ mv *.png ../../src/main/resources-icons/ ** (process:2326118): WARNING **: 19:35:52.818: Unable to create profile directory (Permission denied) (13) ** Message: 19:35:52.827: Cannot create profile directory /nonexistent/first-build/.config/inkscape. ** Message: 19:35:52.827: Inkscape will run with default settings, and new settings will not be saved. Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories ** (inkscape:2326118): WARNING **: 19:35:52.966: Could not create directory '/nonexistent/first-build/.config/inkscape' ** (inkscape:2326118): WARNING **: 19:35:52.966: Could not create extension error log file '/nonexistent/first-build/.config/inkscape/extension-errors.log' (inkscape:2326118): Gtk-CRITICAL **: 19:35:53.003: Unable to create user data directory '/nonexistent/first-build/.local/share' for storing the recently used files list: Permission denied ** (inkscape:2326118): WARNING **: 19:35:53.003: Failed to wrap object of type 'GtkRecentManager'. Hint: this error is commonly caused by failing to call a library init() function. ** (process:2326129): WARNING **: 19:35:53.096: Unable to create profile directory (Permission denied) (13) ** Message: 19:35:53.105: Cannot create profile directory /nonexistent/first-build/.config/inkscape. ** Message: 19:35:53.105: Inkscape will run with default settings, and new settings will not be saved. Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories ** (inkscape:2326129): WARNING **: 19:35:53.245: Could not create directory '/nonexistent/first-build/.config/inkscape' ** (inkscape:2326129): WARNING **: 19:35:53.245: Could not create extension error log file '/nonexistent/first-build/.config/inkscape/extension-errors.log' (inkscape:2326129): Gtk-CRITICAL **: 19:35:53.283: Unable to create user data directory '/nonexistent/first-build/.local/share' for storing the recently used files list: Permission denied ** (inkscape:2326129): WARNING **: 19:35:53.283: Failed to wrap object of type 'GtkRecentManager'. Hint: this error is commonly caused by failing to call a library init() function. ** (process:2326146): WARNING **: 19:35:53.374: Unable to create profile directory (Permission denied) (13) ** Message: 19:35:53.383: Cannot create profile directory /nonexistent/first-build/.config/inkscape. ** Message: 19:35:53.383: Inkscape will run with default settings, and new settings will not be saved. Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories ** (inkscape:2326146): WARNING **: 19:35:53.522: Could not create directory '/nonexistent/first-build/.config/inkscape' ** (inkscape:2326146): WARNING **: 19:35:53.522: Could not create extension error log file '/nonexistent/first-build/.config/inkscape/extension-errors.log' (inkscape:2326146): Gtk-CRITICAL **: 19:35:53.558: Unable to create user data directory '/nonexistent/first-build/.local/share' for storing the recently used files list: Permission denied ** (inkscape:2326146): WARNING **: 19:35:53.558: Failed to wrap object of type 'GtkRecentManager'. Hint: this error is commonly caused by failing to call a library init() function. ** (process:2326156): WARNING **: 19:35:53.652: Unable to create profile directory (Permission denied) (13) ** Message: 19:35:53.660: Cannot create profile directory /nonexistent/first-build/.config/inkscape. ** Message: 19:35:53.661: Inkscape will run with default settings, and new settings will not be saved. Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories ** (inkscape:2326156): WARNING **: 19:35:53.801: Could not create directory '/nonexistent/first-build/.config/inkscape' ** (inkscape:2326156): WARNING **: 19:35:53.801: Could not create extension error log file '/nonexistent/first-build/.config/inkscape/extension-errors.log' (inkscape:2326156): Gtk-CRITICAL **: 19:35:53.838: Unable to create user data directory '/nonexistent/first-build/.local/share' for storing the recently used files list: Permission denied ** (inkscape:2326156): WARNING **: 19:35:53.838: Failed to wrap object of type 'GtkRecentManager'. Hint: this error is commonly caused by failing to call a library init() function. ** (process:2326171): WARNING **: 19:35:53.927: Unable to create profile directory (Permission denied) (13) ** Message: 19:35:53.936: Cannot create profile directory /nonexistent/first-build/.config/inkscape. ** Message: 19:35:53.936: Inkscape will run with default settings, and new settings will not be saved. Fontconfig error: No writable cache directories Fontconfig error: No writable cache directories ** (inkscape:2326171): WARNING **: 19:35:54.074: Could not create directory '/nonexistent/first-build/.config/inkscape' ** (inkscape:2326171): WARNING **: 19:35:54.074: Could not create extension error log file '/nonexistent/first-build/.config/inkscape/extension-errors.log' (inkscape:2326171): Gtk-CRITICAL **: 19:35:54.112: Unable to create user data directory '/nonexistent/first-build/.local/share' for storing the recently used files list: Permission denied ** (inkscape:2326171): WARNING **: 19:35:54.112: Failed to wrap object of type 'GtkRecentManager'. Hint: this error is commonly caused by failing to call a library init() function. make[1]: Leaving directory '/build/reproducible-path/igv-2.18.5+dfsg' jh_linkjars -O--buildsystem=gradle Duplicate specification "unlink|u" for option "u" Duplicate specification "unlink|u" for option "u" dh_auto_build -O--buildsystem=gradle mkdir -p .gradle/init.d cp /usr/share/gradle-debian-helper/init.gradle .gradle/init.d/ gradle --info --console plain --offline --stacktrace --no-daemon --refresh-dependencies --gradle-user-home .gradle -Duser.home=. -Duser.name=debian -Ddebian.package=igv -Dfile.encoding=UTF-8 --parallel --max-workers=42 jar openjdk version "21.0.5" 2024-10-15 OpenJDK Runtime Environment (build 21.0.5+11-Debian-1) OpenJDK 64-Bit Server VM (build 21.0.5+11-Debian-1, mixed mode, sharing) Initialized native services in: /build/reproducible-path/igv-2.18.5+dfsg/.gradle/native To honour the JVM settings for this build a new JVM will be forked. Please consider using the daemon: https://docs.gradle.org/4.4.1/userguide/gradle_daemon.html. Starting process 'Gradle build daemon'. Working directory: /build/reproducible-path/igv-2.18.5+dfsg/.gradle/daemon/4.4.1 Command: /usr/lib/jvm/java-21-openjdk-amd64/bin/java --add-opens java.base/java.lang=ALL-UNNAMED -Xbootclasspath/a:/usr/share/java/gradle-helper-hook.jar:/usr/share/java/maven-repo-helper.jar -Dfile.encoding=UTF-8 -Duser.country=US -Duser.language=en -Duser.variant -cp /usr/share/gradle/lib/gradle-launcher-4.4.1.jar org.gradle.launcher.daemon.bootstrap.GradleDaemon 4.4.1 Successfully started process 'Gradle build daemon' An attempt to start the daemon took 1.268 secs. The client will now receive all logging from the daemon (pid: 2326410). The daemon log file: /build/reproducible-path/igv-2.18.5+dfsg/.gradle/daemon/4.4.1/daemon-2326410.out.log Closing daemon's stdin at end of input. The daemon will no longer process any standard input. Daemon will be stopped at the end of the build stopping after processing Using 42 worker leases. Creating new cache for fileHashes, path /build/reproducible-path/igv-2.18.5+dfsg/.gradle/caches/4.4.1/fileHashes/fileHashes.bin, access org.gradle.cache.internal.DefaultCacheAccess@6e35b1e7 Creating new cache for resourceHashesCache, path /build/reproducible-path/igv-2.18.5+dfsg/.gradle/caches/4.4.1/fileHashes/resourceHashesCache.bin, access org.gradle.cache.internal.DefaultCacheAccess@6e35b1e7 Creating new cache for fileHashes, path /build/reproducible-path/igv-2.18.5+dfsg/.gradle/4.4.1/fileHashes/fileHashes.bin, access org.gradle.cache.internal.DefaultCacheAccess@3dbec4dd Starting Build Compiling initialization script '/build/reproducible-path/igv-2.18.5+dfsg/.gradle/init.d/init.gradle' using SubsetScriptTransformer. Creating new cache for metadata-1.1/results, path /build/reproducible-path/igv-2.18.5+dfsg/.gradle/caches/transforms-1/metadata-1.1/results.bin, access org.gradle.cache.internal.DefaultCacheAccess@1e97d0e9 Compiling initialization script '/build/reproducible-path/igv-2.18.5+dfsg/.gradle/init.d/init.gradle' using BuildScriptTransformer. Compiling settings file '/build/reproducible-path/igv-2.18.5+dfsg/settings.gradle' using SubsetScriptTransformer. Compiling settings file '/build/reproducible-path/igv-2.18.5+dfsg/settings.gradle' using BuildScriptTransformer. Settings evaluated using settings file '/build/reproducible-path/igv-2.18.5+dfsg/settings.gradle'. Projects loaded. Root project using build file '/build/reproducible-path/igv-2.18.5+dfsg/build.gradle'. Included projects: [root project 'igv'] Keep-alive timer started Adding Debian repository to project 'igv' Parallel execution is an incubating feature. Evaluating root project 'igv' using build file '/build/reproducible-path/igv-2.18.5+dfsg/build.gradle'. Compiling build file '/build/reproducible-path/igv-2.18.5+dfsg/build.gradle' using SubsetScriptTransformer. Compiling build file '/build/reproducible-path/igv-2.18.5+dfsg/build.gradle' using BuildScriptTransformer. Adding Maven pom generation to project 'igv' Linking the generated javadoc to the system JDK API documentation All projects evaluated. Selected primary task 'jar' from project : Creating new cache for annotation-processors, path /build/reproducible-path/igv-2.18.5+dfsg/.gradle/4.4.1/fileContent/annotation-processors.bin, access org.gradle.cache.internal.DefaultCacheAccess@4b5f4560 Tasks to be executed: [task ':compileJava', task ':processResources', task ':classes', task ':debianMavenPom', task ':jar'] Creating new cache for resourceHashesCache, path /build/reproducible-path/igv-2.18.5+dfsg/.gradle/4.4.1/fileHashes/resourceHashesCache.bin, access org.gradle.cache.internal.DefaultCacheAccess@3dbec4dd Creating new cache for taskHistory, path /build/reproducible-path/igv-2.18.5+dfsg/.gradle/4.4.1/taskHistory/taskHistory.bin, access org.gradle.cache.internal.DefaultCacheAccess@3164746d Creating new cache for outputFiles, path /build/reproducible-path/igv-2.18.5+dfsg/.gradle/buildOutputCleanup/outputFiles.bin, access org.gradle.cache.internal.DefaultCacheAccess@5240b751 :compileJava (Thread[#87,Task worker for ':' Thread 4,5,main]) started. :compileJava Putting task artifact state for task ':compileJava' into context took 0.004 secs. Creating new cache for metadata-2.36/module-metadata, path /build/reproducible-path/igv-2.18.5+dfsg/.gradle/caches/modules-2/metadata-2.36/module-metadata.bin, access org.gradle.cache.internal.DefaultCacheAccess@2e6d5a5e Loading the Maven rules... Replacing com.google.code.gson:gson:jar:2.8.9 -> com.google.code.gson:gson:jar:debian Passing through com.google.code.gson:gson-parent:jar:debian Replacing org.apache.commons:commons-math3:jar:3.6.1 -> org.apache.commons:commons-math3:jar:debian Replacing commons-io:commons-io:jar:2.7 -> commons-io:commons-io:jar:debian Passing through org.apache.commons:commons-parent:jar:debian Passing through org.apache:apache:jar:debian Replacing org.apache.commons:commons-compress:jar:1.26.0 -> org.apache.commons:commons-compress:jar:debian Replacing org.apache.commons:commons-jexl:jar:2.1.1 -> org.apache.commons:commons-jexl:jar:debian Replacing org.apache.commons:commons-lang3:jar:3.9 -> org.apache.commons:commons-lang3:jar:debian Replacing com.github.samtools:htsjdk:jar:4.1.2 -> com.github.samtools:htsjdk:jar:debian Replacing org.swinglabs:swing-layout:jar:1.0.3 -> org.swinglabs:swing-layout:jar:debian Replacing com.formdev:jide-oss:jar:3.7.12 -> com.jidesoft:jide-oss:jar:debian Replacing com.google.guava:guava:jar:32.1.3-jre -> com.google.guava:guava:jar:debian Passing through com.google.guava:guava-parent:jar:debian Replacing org.apache.xmlgraphics:batik-dom:jar:1.17 -> org.apache.xmlgraphics:batik-dom:jar:debian Passing through org.apache.xmlgraphics:batik:jar:debian Replacing org.apache.xmlgraphics:batik-svggen:jar:1.17 -> org.apache.xmlgraphics:batik-svggen:jar:debian Replacing org.apache.xmlgraphics:batik-codec:jar:1.17 -> org.apache.xmlgraphics:batik-codec:jar:debian Replacing org.netbeans.external:AbsoluteLayout:jar:RELEASE110 -> org.netbeans.external:AbsoluteLayout:jar:debian Ignoring software.amazon.awssdk:cognitoidentity:jar:2.27.4 Ignoring software.amazon.awssdk:sts:jar:2.27.4 Ignoring software.amazon.awssdk:s3:jar:2.27.4 Ignoring software.amazon.awssdk:sso:jar:2.27.4 Passing through commons-codec:commons-codec:jar:debian Passing through commons-logging:commons-logging:jar:debian Passing through gov.nih.nlm.ncbi:ngs-java:jar:debian Passing through org.sharegov:mjson:jar:debian Passing through org.jsr-305:jsr305:jar:0.x Passing through org.apache.xmlgraphics:batik-ext:jar:debian Passing through org.apache.xmlgraphics:batik-shared-resources:jar:debian Passing through org.apache.xmlgraphics:batik-util:jar:debian Passing through org.apache.xmlgraphics:batik-xml:jar:debian Passing through org.apache.xmlgraphics:batik-awt-util:jar:debian Passing through org.apache.xmlgraphics:batik-transcoder:jar:debian Passing through org.apache.xmlgraphics:batik-constants:jar:debian Passing through org.apache.xmlgraphics:batik-i18n:jar:debian Passing through org.apache.xmlgraphics:xmlgraphics-commons:jar:debian file or directory '/build/reproducible-path/igv-2.18.5+dfsg/lib', not found Malformed jar [htsjdk-debian.jar] found on classpath. Gradle 5.0 will no longer allow malformed jars on a classpath. at org.gradle.api.internal.changedetection.state.AbstractClasspathSnapshotBuilder$JarHasher.hashMalformedZip(AbstractClasspathSnapshotBuilder.java:120) at org.gradle.api.internal.changedetection.state.AbstractClasspathSnapshotBuilder$JarHasher.hashJarContents(AbstractClasspathSnapshotBuilder.java:115) at org.gradle.api.internal.changedetection.state.AbstractClasspathSnapshotBuilder$JarHasher.hash(AbstractClasspathSnapshotBuilder.java:93) at org.gradle.api.internal.changedetection.state.ResourceSnapshotterCacheService.hashFile(ResourceSnapshotterCacheService.java:44) at org.gradle.api.internal.changedetection.state.AbstractClasspathSnapshotBuilder.visitJar(AbstractClasspathSnapshotBuilder.java:83) at org.gradle.api.internal.changedetection.state.AbstractClasspathSnapshotBuilder.visitFileSnapshot(AbstractClasspathSnapshotBuilder.java:76) at org.gradle.api.internal.changedetection.state.AbstractFileCollectionSnapshotter$FileCollectionVisitorImpl.visitCollection(AbstractFileCollectionSnapshotter.java:77) at org.gradle.api.internal.file.AbstractFileCollection.visitRootElements(AbstractFileCollection.java:234) at org.gradle.api.internal.file.CompositeFileCollection.visitRootElements(CompositeFileCollection.java:185) at org.gradle.api.internal.changedetection.state.AbstractFileCollectionSnapshotter.snapshot(AbstractFileCollectionSnapshotter.java:53) at org.gradle.api.internal.changedetection.state.DefaultCompileClasspathSnapshotter.snapshot(DefaultCompileClasspathSnapshotter.java:38) at org.gradle.api.internal.changedetection.state.CacheBackedTaskHistoryRepository.snapshotTaskFiles(CacheBackedTaskHistoryRepository.java:331) at org.gradle.api.internal.changedetection.state.CacheBackedTaskHistoryRepository.createExecution(CacheBackedTaskHistoryRepository.java:154) at org.gradle.api.internal.changedetection.state.CacheBackedTaskHistoryRepository.access$100(CacheBackedTaskHistoryRepository.java:61) at org.gradle.api.internal.changedetection.state.CacheBackedTaskHistoryRepository$1.getCurrentExecution(CacheBackedTaskHistoryRepository.java:114) at org.gradle.api.internal.changedetection.changes.DefaultTaskArtifactStateRepository$TaskArtifactStateImpl.getStates(DefaultTaskArtifactStateRepository.java:201) at org.gradle.api.internal.changedetection.changes.DefaultTaskArtifactStateRepository$TaskArtifactStateImpl.isUpToDate(DefaultTaskArtifactStateRepository.java:86) at org.gradle.api.internal.tasks.execution.SkipUpToDateTaskExecuter.execute(SkipUpToDateTaskExecuter.java:53) at org.gradle.api.internal.tasks.execution.ResolveTaskOutputCachingStateExecuter.execute(ResolveTaskOutputCachingStateExecuter.java:54) at org.gradle.api.internal.tasks.execution.ValidatingTaskExecuter.execute(ValidatingTaskExecuter.java:60) at org.gradle.api.internal.tasks.execution.SkipEmptySourceFilesTaskExecuter.execute(SkipEmptySourceFilesTaskExecuter.java:97) at org.gradle.api.internal.tasks.execution.CleanupStaleOutputsExecuter.execute(CleanupStaleOutputsExecuter.java:87) at org.gradle.api.internal.tasks.execution.ResolveTaskArtifactStateTaskExecuter.execute(ResolveTaskArtifactStateTaskExecuter.java:52) at org.gradle.api.internal.tasks.execution.SkipTaskWithNoActionsExecuter.execute(SkipTaskWithNoActionsExecuter.java:52) at org.gradle.api.internal.tasks.execution.SkipOnlyIfTaskExecuter.execute(SkipOnlyIfTaskExecuter.java:54) at org.gradle.api.internal.tasks.execution.ExecuteAtMostOnceTaskExecuter.execute(ExecuteAtMostOnceTaskExecuter.java:43) at org.gradle.api.internal.tasks.execution.CatchExceptionTaskExecuter.execute(CatchExceptionTaskExecuter.java:34) at org.gradle.execution.taskgraph.DefaultTaskGraphExecuter$EventFiringTaskWorker$1.run(DefaultTaskGraphExecuter.java:248) at org.gradle.internal.progress.DefaultBuildOperationExecutor$RunnableBuildOperationWorker.execute(DefaultBuildOperationExecutor.java:336) at org.gradle.internal.progress.DefaultBuildOperationExecutor$RunnableBuildOperationWorker.execute(DefaultBuildOperationExecutor.java:328) at org.gradle.internal.progress.DefaultBuildOperationExecutor.execute(DefaultBuildOperationExecutor.java:199) at org.gradle.internal.progress.DefaultBuildOperationExecutor.run(DefaultBuildOperationExecutor.java:110) at org.gradle.execution.taskgraph.DefaultTaskGraphExecuter$EventFiringTaskWorker.execute(DefaultTaskGraphExecuter.java:241) at org.gradle.execution.taskgraph.DefaultTaskGraphExecuter$EventFiringTaskWorker.execute(DefaultTaskGraphExecuter.java:230) at org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker.processTask(DefaultTaskPlanExecutor.java:123) at org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker.access$200(DefaultTaskPlanExecutor.java:79) at org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker$1.execute(DefaultTaskPlanExecutor.java:104) at org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker$1.execute(DefaultTaskPlanExecutor.java:98) at org.gradle.execution.taskgraph.DefaultTaskExecutionPlan.execute(DefaultTaskExecutionPlan.java:626) at org.gradle.execution.taskgraph.DefaultTaskExecutionPlan.executeWithTask(DefaultTaskExecutionPlan.java:581) at org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker.run(DefaultTaskPlanExecutor.java:98) at org.gradle.internal.concurrent.ExecutorPolicy$CatchAndRecordFailures.onExecute(ExecutorPolicy.java:63) at org.gradle.internal.concurrent.ManagedExecutorImpl$1.run(ManagedExecutorImpl.java:46) at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1144) at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:642) at org.gradle.internal.concurrent.ThreadFactoryImpl$ManagedThreadRunnable.run(ThreadFactoryImpl.java:55) at java.base/java.lang.Thread.run(Thread.java:1583) file or directory '/build/reproducible-path/igv-2.18.5+dfsg/lib', not found Up-to-date check for task ':compileJava' took 2.952 secs. It is not up-to-date because: No history is available. All input files are considered out-of-date for incremental task ':compileJava'. file or directory '/build/reproducible-path/igv-2.18.5+dfsg/lib', not found file or directory '/build/reproducible-path/igv-2.18.5+dfsg/lib', not found Compiling with JDK Java compiler API. Note: Some input files use or override a deprecated API. Note: Recompile with -Xlint:deprecation for details. Note: Some input files use unchecked or unsafe operations. Note: Recompile with -Xlint:unchecked for details. :compileJava (Thread[#87,Task worker for ':' Thread 4,5,main]) completed. Took 11.025 secs. :processResources (Thread[#87,Task worker for ':' Thread 4,5,main]) started. :processResources Putting task artifact state for task ':processResources' into context took 0.0 secs. Up-to-date check for task ':processResources' took 0.251 secs. It is not up-to-date because: No history is available. :processResources (Thread[#87,Task worker for ':' Thread 4,5,main]) completed. Took 0.384 secs. :classes (Thread[#87,Task worker for ':' Thread 4,5,main]) started. :classes Skipping task ':classes' as it has no actions. :classes (Thread[#87,Task worker for ':' Thread 4,5,main]) completed. Took 0.001 secs. :debianMavenPom (Thread[#87,Task worker for ':' Thread 4,5,main]) started. :debianMavenPom Putting task artifact state for task ':debianMavenPom' into context took 0.0 secs. Up-to-date check for task ':debianMavenPom' took 0.0 secs. It is not up-to-date because: No history is available. Generating pom file /build/reproducible-path/igv-2.18.5+dfsg/build/debian/igv.pom :debianMavenPom (Thread[#87,Task worker for ':' Thread 4,5,main]) completed. Took 0.065 secs. :jar (Thread[#87,Task worker for ':' Thread 4,5,main]) started. :jar Putting task artifact state for task ':jar' into context took 0.0 secs. Up-to-date check for task ':jar' took 0.025 secs. It is not up-to-date because: No history is available. :jar (Thread[#87,Task worker for ':' Thread 4,5,main]) completed. Took 0.649 secs. BUILD SUCCESSFUL in 20s 4 actionable tasks: 4 executed jh_build -O--buildsystem=gradle dh_auto_test -O--buildsystem=gradle mkdir -p .gradle/init.d cp /usr/share/gradle-debian-helper/init.gradle .gradle/init.d/ gradle --info --console plain --offline --stacktrace --no-daemon --refresh-dependencies --gradle-user-home .gradle -Duser.home=. -Duser.name=debian -Ddebian.package=igv -Dfile.encoding=UTF-8 --parallel --max-workers=42 test openjdk version "21.0.5" 2024-10-15 OpenJDK Runtime Environment (build 21.0.5+11-Debian-1) OpenJDK 64-Bit Server VM (build 21.0.5+11-Debian-1, mixed mode, sharing) Initialized native services in: /build/reproducible-path/igv-2.18.5+dfsg/.gradle/native To honour the JVM settings for this build a new JVM will be forked. Please consider using the daemon: https://docs.gradle.org/4.4.1/userguide/gradle_daemon.html. Starting process 'Gradle build daemon'. Working directory: /build/reproducible-path/igv-2.18.5+dfsg/.gradle/daemon/4.4.1 Command: /usr/lib/jvm/java-21-openjdk-amd64/bin/java --add-opens java.base/java.lang=ALL-UNNAMED -Xbootclasspath/a:/usr/share/java/gradle-helper-hook.jar:/usr/share/java/maven-repo-helper.jar -Dfile.encoding=UTF-8 -Duser.country=US -Duser.language=en -Duser.variant -cp /usr/share/gradle/lib/gradle-launcher-4.4.1.jar org.gradle.launcher.daemon.bootstrap.GradleDaemon 4.4.1 Successfully started process 'Gradle build daemon' An attempt to start the daemon took 0.78 secs. The client will now receive all logging from the daemon (pid: 2330660). The daemon log file: /build/reproducible-path/igv-2.18.5+dfsg/.gradle/daemon/4.4.1/daemon-2330660.out.log Daemon will be stopped at the end of the build stopping after processing Closing daemon's stdin at end of input. The daemon will no longer process any standard input. Using 42 worker leases. Creating new cache for fileHashes, path /build/reproducible-path/igv-2.18.5+dfsg/.gradle/caches/4.4.1/fileHashes/fileHashes.bin, access org.gradle.cache.internal.DefaultCacheAccess@4bb7311f Creating new cache for resourceHashesCache, path /build/reproducible-path/igv-2.18.5+dfsg/.gradle/caches/4.4.1/fileHashes/resourceHashesCache.bin, access org.gradle.cache.internal.DefaultCacheAccess@4bb7311f Creating new cache for fileHashes, path /build/reproducible-path/igv-2.18.5+dfsg/.gradle/4.4.1/fileHashes/fileHashes.bin, access org.gradle.cache.internal.DefaultCacheAccess@1f5bb400 Starting Build Creating new cache for metadata-1.1/results, path /build/reproducible-path/igv-2.18.5+dfsg/.gradle/caches/transforms-1/metadata-1.1/results.bin, access org.gradle.cache.internal.DefaultCacheAccess@56291189 Settings evaluated using settings file '/build/reproducible-path/igv-2.18.5+dfsg/settings.gradle'. Projects loaded. Root project using build file '/build/reproducible-path/igv-2.18.5+dfsg/build.gradle'. Included projects: [root project 'igv'] Keep-alive timer started Adding Debian repository to project 'igv' Parallel execution is an incubating feature. Evaluating root project 'igv' using build file '/build/reproducible-path/igv-2.18.5+dfsg/build.gradle'. Adding Maven pom generation to project 'igv' Linking the generated javadoc to the system JDK API documentation All projects evaluated. Selected primary task 'test' from project : Creating new cache for annotation-processors, path /build/reproducible-path/igv-2.18.5+dfsg/.gradle/4.4.1/fileContent/annotation-processors.bin, access org.gradle.cache.internal.DefaultCacheAccess@44af80b2 Tasks to be executed: [task ':compileJava', task ':processResources', task ':classes', task ':compileTestJava', task ':processTestResources', task ':testClasses', task ':test'] Creating new cache for resourceHashesCache, path /build/reproducible-path/igv-2.18.5+dfsg/.gradle/4.4.1/fileHashes/resourceHashesCache.bin, access org.gradle.cache.internal.DefaultCacheAccess@1f5bb400 Creating new cache for taskHistory, path /build/reproducible-path/igv-2.18.5+dfsg/.gradle/4.4.1/taskHistory/taskHistory.bin, access org.gradle.cache.internal.DefaultCacheAccess@620eae09 Creating new cache for outputFiles, path /build/reproducible-path/igv-2.18.5+dfsg/.gradle/buildOutputCleanup/outputFiles.bin, access org.gradle.cache.internal.DefaultCacheAccess@78ca1ace :compileJava (Thread[#85,Task worker for ':' Thread 2,5,main]) started. :compileJava Putting task artifact state for task ':compileJava' into context took 0.004 secs. Creating new cache for metadata-2.36/module-metadata, path /build/reproducible-path/igv-2.18.5+dfsg/.gradle/caches/modules-2/metadata-2.36/module-metadata.bin, access org.gradle.cache.internal.DefaultCacheAccess@24a03c59 Loading the Maven rules... Replacing com.google.code.gson:gson:jar:2.8.9 -> com.google.code.gson:gson:jar:debian Passing through com.google.code.gson:gson-parent:jar:debian Replacing org.apache.commons:commons-math3:jar:3.6.1 -> org.apache.commons:commons-math3:jar:debian Replacing commons-io:commons-io:jar:2.7 -> commons-io:commons-io:jar:debian Passing through org.apache.commons:commons-parent:jar:debian Passing through org.apache:apache:jar:debian Replacing org.apache.commons:commons-compress:jar:1.26.0 -> org.apache.commons:commons-compress:jar:debian Replacing org.apache.commons:commons-jexl:jar:2.1.1 -> org.apache.commons:commons-jexl:jar:debian Replacing org.apache.commons:commons-lang3:jar:3.9 -> org.apache.commons:commons-lang3:jar:debian Replacing com.github.samtools:htsjdk:jar:4.1.2 -> com.github.samtools:htsjdk:jar:debian Replacing org.swinglabs:swing-layout:jar:1.0.3 -> org.swinglabs:swing-layout:jar:debian Replacing com.formdev:jide-oss:jar:3.7.12 -> com.jidesoft:jide-oss:jar:debian Replacing com.google.guava:guava:jar:32.1.3-jre -> com.google.guava:guava:jar:debian Passing through com.google.guava:guava-parent:jar:debian Replacing org.apache.xmlgraphics:batik-dom:jar:1.17 -> org.apache.xmlgraphics:batik-dom:jar:debian Passing through org.apache.xmlgraphics:batik:jar:debian Replacing org.apache.xmlgraphics:batik-svggen:jar:1.17 -> org.apache.xmlgraphics:batik-svggen:jar:debian Replacing org.apache.xmlgraphics:batik-codec:jar:1.17 -> org.apache.xmlgraphics:batik-codec:jar:debian Replacing org.netbeans.external:AbsoluteLayout:jar:RELEASE110 -> org.netbeans.external:AbsoluteLayout:jar:debian Ignoring software.amazon.awssdk:cognitoidentity:jar:2.27.4 Ignoring software.amazon.awssdk:sts:jar:2.27.4 Ignoring software.amazon.awssdk:s3:jar:2.27.4 Ignoring software.amazon.awssdk:sso:jar:2.27.4 Passing through commons-codec:commons-codec:jar:debian Passing through commons-logging:commons-logging:jar:debian Passing through gov.nih.nlm.ncbi:ngs-java:jar:debian Passing through org.sharegov:mjson:jar:debian Passing through org.jsr-305:jsr305:jar:0.x Passing through org.apache.xmlgraphics:batik-ext:jar:debian Passing through org.apache.xmlgraphics:batik-shared-resources:jar:debian Passing through org.apache.xmlgraphics:batik-util:jar:debian Passing through org.apache.xmlgraphics:batik-xml:jar:debian Passing through org.apache.xmlgraphics:batik-awt-util:jar:debian Passing through org.apache.xmlgraphics:batik-transcoder:jar:debian Passing through org.apache.xmlgraphics:batik-constants:jar:debian Passing through org.apache.xmlgraphics:batik-i18n:jar:debian Passing through org.apache.xmlgraphics:xmlgraphics-commons:jar:debian file or directory '/build/reproducible-path/igv-2.18.5+dfsg/lib', not found file or directory '/build/reproducible-path/igv-2.18.5+dfsg/lib', not found Skipping task ':compileJava' as it is up-to-date (took 0.68 secs). :compileJava UP-TO-DATE :compileJava (Thread[#85,Task worker for ':' Thread 2,5,main]) completed. Took 0.709 secs. :processResources (Thread[#85,Task worker for ':' Thread 2,5,main]) started. :processResources Putting task artifact state for task ':processResources' into context took 0.0 secs. Skipping task ':processResources' as it is up-to-date (took 0.046 secs). :processResources UP-TO-DATE :processResources (Thread[#85,Task worker for ':' Thread 2,5,main]) completed. Took 0.051 secs. :classes (Thread[#85,Task worker for ':' Thread 2,5,main]) started. :classes Skipping task ':classes' as it has no actions. :classes UP-TO-DATE :classes (Thread[#85,Task worker for ':' Thread 2,5,main]) completed. Took 0.0 secs. :compileTestJava (Thread[#85,Task worker for ':' Thread 2,5,main]) started. :compileTestJava Putting task artifact state for task ':compileTestJava' into context took 0.0 secs. Malformed class file [SupplementaryAlignment$SupplementaryNeighbors.class] found on compile classpath, which means that this class will cause a compile error if referenced in a source file. Gradle 5.0 will no longer allow malformed classes on compile classpath. at org.gradle.api.internal.changedetection.state.AbiExtractingClasspathResourceHasher.hash(AbiExtractingClasspathResourceHasher.java:60) at org.gradle.api.internal.changedetection.state.ResourceSnapshotterCacheService.hashFile(ResourceSnapshotterCacheService.java:44) at org.gradle.api.internal.changedetection.state.CachingResourceHasher.hash(CachingResourceHasher.java:47) at org.gradle.api.internal.changedetection.state.ClasspathEntrySnapshotBuilder.visitFileSnapshot(ClasspathEntrySnapshotBuilder.java:62) at org.gradle.api.internal.changedetection.state.FileTree.visit(FileTree.java:36) at org.gradle.api.internal.changedetection.state.AbstractClasspathSnapshotBuilder.visitFileTreeSnapshot(AbstractClasspathSnapshotBuilder.java:66) at org.gradle.api.internal.changedetection.state.AbstractFileCollectionSnapshotter$FileCollectionVisitorImpl.visitDirectoryTree(AbstractFileCollectionSnapshotter.java:100) at org.gradle.api.internal.changedetection.state.AbstractFileCollectionSnapshotter$FileCollectionVisitorImpl.visitCollection(AbstractFileCollectionSnapshotter.java:82) at org.gradle.api.internal.file.AbstractFileCollection.visitRootElements(AbstractFileCollection.java:234) at org.gradle.api.internal.file.CompositeFileCollection.visitRootElements(CompositeFileCollection.java:185) at org.gradle.api.internal.changedetection.state.AbstractFileCollectionSnapshotter.snapshot(AbstractFileCollectionSnapshotter.java:53) at org.gradle.api.internal.changedetection.state.DefaultCompileClasspathSnapshotter.snapshot(DefaultCompileClasspathSnapshotter.java:38) at org.gradle.api.internal.changedetection.state.CacheBackedTaskHistoryRepository.snapshotTaskFiles(CacheBackedTaskHistoryRepository.java:331) at org.gradle.api.internal.changedetection.state.CacheBackedTaskHistoryRepository.createExecution(CacheBackedTaskHistoryRepository.java:154) at org.gradle.api.internal.changedetection.state.CacheBackedTaskHistoryRepository.access$100(CacheBackedTaskHistoryRepository.java:61) at org.gradle.api.internal.changedetection.state.CacheBackedTaskHistoryRepository$1.getCurrentExecution(CacheBackedTaskHistoryRepository.java:114) at org.gradle.api.internal.changedetection.changes.DefaultTaskArtifactStateRepository$TaskArtifactStateImpl.getStates(DefaultTaskArtifactStateRepository.java:201) at org.gradle.api.internal.changedetection.changes.DefaultTaskArtifactStateRepository$TaskArtifactStateImpl.isUpToDate(DefaultTaskArtifactStateRepository.java:86) at org.gradle.api.internal.tasks.execution.SkipUpToDateTaskExecuter.execute(SkipUpToDateTaskExecuter.java:53) at org.gradle.api.internal.tasks.execution.ResolveTaskOutputCachingStateExecuter.execute(ResolveTaskOutputCachingStateExecuter.java:54) at org.gradle.api.internal.tasks.execution.ValidatingTaskExecuter.execute(ValidatingTaskExecuter.java:60) at org.gradle.api.internal.tasks.execution.SkipEmptySourceFilesTaskExecuter.execute(SkipEmptySourceFilesTaskExecuter.java:97) at org.gradle.api.internal.tasks.execution.CleanupStaleOutputsExecuter.execute(CleanupStaleOutputsExecuter.java:87) at org.gradle.api.internal.tasks.execution.ResolveTaskArtifactStateTaskExecuter.execute(ResolveTaskArtifactStateTaskExecuter.java:52) at org.gradle.api.internal.tasks.execution.SkipTaskWithNoActionsExecuter.execute(SkipTaskWithNoActionsExecuter.java:52) at org.gradle.api.internal.tasks.execution.SkipOnlyIfTaskExecuter.execute(SkipOnlyIfTaskExecuter.java:54) at org.gradle.api.internal.tasks.execution.ExecuteAtMostOnceTaskExecuter.execute(ExecuteAtMostOnceTaskExecuter.java:43) at org.gradle.api.internal.tasks.execution.CatchExceptionTaskExecuter.execute(CatchExceptionTaskExecuter.java:34) at org.gradle.execution.taskgraph.DefaultTaskGraphExecuter$EventFiringTaskWorker$1.run(DefaultTaskGraphExecuter.java:248) at org.gradle.internal.progress.DefaultBuildOperationExecutor$RunnableBuildOperationWorker.execute(DefaultBuildOperationExecutor.java:336) at org.gradle.internal.progress.DefaultBuildOperationExecutor$RunnableBuildOperationWorker.execute(DefaultBuildOperationExecutor.java:328) at org.gradle.internal.progress.DefaultBuildOperationExecutor.execute(DefaultBuildOperationExecutor.java:199) at org.gradle.internal.progress.DefaultBuildOperationExecutor.run(DefaultBuildOperationExecutor.java:110) at org.gradle.execution.taskgraph.DefaultTaskGraphExecuter$EventFiringTaskWorker.execute(DefaultTaskGraphExecuter.java:241) at org.gradle.execution.taskgraph.DefaultTaskGraphExecuter$EventFiringTaskWorker.execute(DefaultTaskGraphExecuter.java:230) at org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker.processTask(DefaultTaskPlanExecutor.java:123) at org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker.access$200(DefaultTaskPlanExecutor.java:79) at org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker$1.execute(DefaultTaskPlanExecutor.java:104) at org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker$1.execute(DefaultTaskPlanExecutor.java:98) at org.gradle.execution.taskgraph.DefaultTaskExecutionPlan.execute(DefaultTaskExecutionPlan.java:626) at org.gradle.execution.taskgraph.DefaultTaskExecutionPlan.executeWithTask(DefaultTaskExecutionPlan.java:581) at org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker.run(DefaultTaskPlanExecutor.java:98) at org.gradle.internal.concurrent.ExecutorPolicy$CatchAndRecordFailures.onExecute(ExecutorPolicy.java:63) at org.gradle.internal.concurrent.ManagedExecutorImpl$1.run(ManagedExecutorImpl.java:46) at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1144) at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:642) at org.gradle.internal.concurrent.ThreadFactoryImpl$ManagedThreadRunnable.run(ThreadFactoryImpl.java:55) at java.base/java.lang.Thread.run(Thread.java:1583) Malformed class file [SortOption.class] found on compile classpath, which means that this class will cause a compile error if referenced in a source file. Gradle 5.0 will no longer allow malformed classes on compile classpath. at org.gradle.api.internal.changedetection.state.AbiExtractingClasspathResourceHasher.hash(AbiExtractingClasspathResourceHasher.java:60) at org.gradle.api.internal.changedetection.state.ResourceSnapshotterCacheService.hashFile(ResourceSnapshotterCacheService.java:44) at org.gradle.api.internal.changedetection.state.CachingResourceHasher.hash(CachingResourceHasher.java:47) at org.gradle.api.internal.changedetection.state.ClasspathEntrySnapshotBuilder.visitFileSnapshot(ClasspathEntrySnapshotBuilder.java:62) at org.gradle.api.internal.changedetection.state.FileTree.visit(FileTree.java:36) at org.gradle.api.internal.changedetection.state.AbstractClasspathSnapshotBuilder.visitFileTreeSnapshot(AbstractClasspathSnapshotBuilder.java:66) at org.gradle.api.internal.changedetection.state.AbstractFileCollectionSnapshotter$FileCollectionVisitorImpl.visitDirectoryTree(AbstractFileCollectionSnapshotter.java:100) at org.gradle.api.internal.changedetection.state.AbstractFileCollectionSnapshotter$FileCollectionVisitorImpl.visitCollection(AbstractFileCollectionSnapshotter.java:82) at org.gradle.api.internal.file.AbstractFileCollection.visitRootElements(AbstractFileCollection.java:234) at org.gradle.api.internal.file.CompositeFileCollection.visitRootElements(CompositeFileCollection.java:185) at org.gradle.api.internal.changedetection.state.AbstractFileCollectionSnapshotter.snapshot(AbstractFileCollectionSnapshotter.java:53) at org.gradle.api.internal.changedetection.state.DefaultCompileClasspathSnapshotter.snapshot(DefaultCompileClasspathSnapshotter.java:38) at org.gradle.api.internal.changedetection.state.CacheBackedTaskHistoryRepository.snapshotTaskFiles(CacheBackedTaskHistoryRepository.java:331) at org.gradle.api.internal.changedetection.state.CacheBackedTaskHistoryRepository.createExecution(CacheBackedTaskHistoryRepository.java:154) at org.gradle.api.internal.changedetection.state.CacheBackedTaskHistoryRepository.access$100(CacheBackedTaskHistoryRepository.java:61) at org.gradle.api.internal.changedetection.state.CacheBackedTaskHistoryRepository$1.getCurrentExecution(CacheBackedTaskHistoryRepository.java:114) at org.gradle.api.internal.changedetection.changes.DefaultTaskArtifactStateRepository$TaskArtifactStateImpl.getStates(DefaultTaskArtifactStateRepository.java:201) at org.gradle.api.internal.changedetection.changes.DefaultTaskArtifactStateRepository$TaskArtifactStateImpl.isUpToDate(DefaultTaskArtifactStateRepository.java:86) at org.gradle.api.internal.tasks.execution.SkipUpToDateTaskExecuter.execute(SkipUpToDateTaskExecuter.java:53) at org.gradle.api.internal.tasks.execution.ResolveTaskOutputCachingStateExecuter.execute(ResolveTaskOutputCachingStateExecuter.java:54) at org.gradle.api.internal.tasks.execution.ValidatingTaskExecuter.execute(ValidatingTaskExecuter.java:60) at org.gradle.api.internal.tasks.execution.SkipEmptySourceFilesTaskExecuter.execute(SkipEmptySourceFilesTaskExecuter.java:97) at org.gradle.api.internal.tasks.execution.CleanupStaleOutputsExecuter.execute(CleanupStaleOutputsExecuter.java:87) at org.gradle.api.internal.tasks.execution.ResolveTaskArtifactStateTaskExecuter.execute(ResolveTaskArtifactStateTaskExecuter.java:52) at org.gradle.api.internal.tasks.execution.SkipTaskWithNoActionsExecuter.execute(SkipTaskWithNoActionsExecuter.java:52) at org.gradle.api.internal.tasks.execution.SkipOnlyIfTaskExecuter.execute(SkipOnlyIfTaskExecuter.java:54) at org.gradle.api.internal.tasks.execution.ExecuteAtMostOnceTaskExecuter.execute(ExecuteAtMostOnceTaskExecuter.java:43) at org.gradle.api.internal.tasks.execution.CatchExceptionTaskExecuter.execute(CatchExceptionTaskExecuter.java:34) at org.gradle.execution.taskgraph.DefaultTaskGraphExecuter$EventFiringTaskWorker$1.run(DefaultTaskGraphExecuter.java:248) at org.gradle.internal.progress.DefaultBuildOperationExecutor$RunnableBuildOperationWorker.execute(DefaultBuildOperationExecutor.java:336) at org.gradle.internal.progress.DefaultBuildOperationExecutor$RunnableBuildOperationWorker.execute(DefaultBuildOperationExecutor.java:328) at org.gradle.internal.progress.DefaultBuildOperationExecutor.execute(DefaultBuildOperationExecutor.java:199) at org.gradle.internal.progress.DefaultBuildOperationExecutor.run(DefaultBuildOperationExecutor.java:110) at org.gradle.execution.taskgraph.DefaultTaskGraphExecuter$EventFiringTaskWorker.execute(DefaultTaskGraphExecuter.java:241) at org.gradle.execution.taskgraph.DefaultTaskGraphExecuter$EventFiringTaskWorker.execute(DefaultTaskGraphExecuter.java:230) at org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker.processTask(DefaultTaskPlanExecutor.java:123) at org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker.access$200(DefaultTaskPlanExecutor.java:79) at org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker$1.execute(DefaultTaskPlanExecutor.java:104) at org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker$1.execute(DefaultTaskPlanExecutor.java:98) at org.gradle.execution.taskgraph.DefaultTaskExecutionPlan.execute(DefaultTaskExecutionPlan.java:626) at org.gradle.execution.taskgraph.DefaultTaskExecutionPlan.executeWithTask(DefaultTaskExecutionPlan.java:581) at org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker.run(DefaultTaskPlanExecutor.java:98) at org.gradle.internal.concurrent.ExecutorPolicy$CatchAndRecordFailures.onExecute(ExecutorPolicy.java:63) at org.gradle.internal.concurrent.ManagedExecutorImpl$1.run(ManagedExecutorImpl.java:46) at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1144) at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:642) at org.gradle.internal.concurrent.ThreadFactoryImpl$ManagedThreadRunnable.run(ThreadFactoryImpl.java:55) at java.base/java.lang.Thread.run(Thread.java:1583) Malformed class file [InsertionSelectionEvent.class] found on compile classpath, which means that this class will cause a compile error if referenced in a source file. Gradle 5.0 will no longer allow malformed classes on compile classpath. at org.gradle.api.internal.changedetection.state.AbiExtractingClasspathResourceHasher.hash(AbiExtractingClasspathResourceHasher.java:60) at org.gradle.api.internal.changedetection.state.ResourceSnapshotterCacheService.hashFile(ResourceSnapshotterCacheService.java:44) at org.gradle.api.internal.changedetection.state.CachingResourceHasher.hash(CachingResourceHasher.java:47) at org.gradle.api.internal.changedetection.state.ClasspathEntrySnapshotBuilder.visitFileSnapshot(ClasspathEntrySnapshotBuilder.java:62) at org.gradle.api.internal.changedetection.state.FileTree.visit(FileTree.java:36) at org.gradle.api.internal.changedetection.state.AbstractClasspathSnapshotBuilder.visitFileTreeSnapshot(AbstractClasspathSnapshotBuilder.java:66) at org.gradle.api.internal.changedetection.state.AbstractFileCollectionSnapshotter$FileCollectionVisitorImpl.visitDirectoryTree(AbstractFileCollectionSnapshotter.java:100) at org.gradle.api.internal.changedetection.state.AbstractFileCollectionSnapshotter$FileCollectionVisitorImpl.visitCollection(AbstractFileCollectionSnapshotter.java:82) at org.gradle.api.internal.file.AbstractFileCollection.visitRootElements(AbstractFileCollection.java:234) at org.gradle.api.internal.file.CompositeFileCollection.visitRootElements(CompositeFileCollection.java:185) at org.gradle.api.internal.changedetection.state.AbstractFileCollectionSnapshotter.snapshot(AbstractFileCollectionSnapshotter.java:53) at org.gradle.api.internal.changedetection.state.DefaultCompileClasspathSnapshotter.snapshot(DefaultCompileClasspathSnapshotter.java:38) at org.gradle.api.internal.changedetection.state.CacheBackedTaskHistoryRepository.snapshotTaskFiles(CacheBackedTaskHistoryRepository.java:331) at org.gradle.api.internal.changedetection.state.CacheBackedTaskHistoryRepository.createExecution(CacheBackedTaskHistoryRepository.java:154) at org.gradle.api.internal.changedetection.state.CacheBackedTaskHistoryRepository.access$100(CacheBackedTaskHistoryRepository.java:61) at org.gradle.api.internal.changedetection.state.CacheBackedTaskHistoryRepository$1.getCurrentExecution(CacheBackedTaskHistoryRepository.java:114) at org.gradle.api.internal.changedetection.changes.DefaultTaskArtifactStateRepository$TaskArtifactStateImpl.getStates(DefaultTaskArtifactStateRepository.java:201) at org.gradle.api.internal.changedetection.changes.DefaultTaskArtifactStateRepository$TaskArtifactStateImpl.isUpToDate(DefaultTaskArtifactStateRepository.java:86) at org.gradle.api.internal.tasks.execution.SkipUpToDateTaskExecuter.execute(SkipUpToDateTaskExecuter.java:53) at org.gradle.api.internal.tasks.execution.ResolveTaskOutputCachingStateExecuter.execute(ResolveTaskOutputCachingStateExecuter.java:54) at org.gradle.api.internal.tasks.execution.ValidatingTaskExecuter.execute(ValidatingTaskExecuter.java:60) at org.gradle.api.internal.tasks.execution.SkipEmptySourceFilesTaskExecuter.execute(SkipEmptySourceFilesTaskExecuter.java:97) at org.gradle.api.internal.tasks.execution.CleanupStaleOutputsExecuter.execute(CleanupStaleOutputsExecuter.java:87) at org.gradle.api.internal.tasks.execution.ResolveTaskArtifactStateTaskExecuter.execute(ResolveTaskArtifactStateTaskExecuter.java:52) at org.gradle.api.internal.tasks.execution.SkipTaskWithNoActionsExecuter.execute(SkipTaskWithNoActionsExecuter.java:52) at org.gradle.api.internal.tasks.execution.SkipOnlyIfTaskExecuter.execute(SkipOnlyIfTaskExecuter.java:54) at org.gradle.api.internal.tasks.execution.ExecuteAtMostOnceTaskExecuter.execute(ExecuteAtMostOnceTaskExecuter.java:43) at org.gradle.api.internal.tasks.execution.CatchExceptionTaskExecuter.execute(CatchExceptionTaskExecuter.java:34) at org.gradle.execution.taskgraph.DefaultTaskGraphExecuter$EventFiringTaskWorker$1.run(DefaultTaskGraphExecuter.java:248) at org.gradle.internal.progress.DefaultBuildOperationExecutor$RunnableBuildOperationWorker.execute(DefaultBuildOperationExecutor.java:336) at org.gradle.internal.progress.DefaultBuildOperationExecutor$RunnableBuildOperationWorker.execute(DefaultBuildOperationExecutor.java:328) at org.gradle.internal.progress.DefaultBuildOperationExecutor.execute(DefaultBuildOperationExecutor.java:199) at org.gradle.internal.progress.DefaultBuildOperationExecutor.run(DefaultBuildOperationExecutor.java:110) at org.gradle.execution.taskgraph.DefaultTaskGraphExecuter$EventFiringTaskWorker.execute(DefaultTaskGraphExecuter.java:241) at org.gradle.execution.taskgraph.DefaultTaskGraphExecuter$EventFiringTaskWorker.execute(DefaultTaskGraphExecuter.java:230) at org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker.processTask(DefaultTaskPlanExecutor.java:123) at org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker.access$200(DefaultTaskPlanExecutor.java:79) at org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker$1.execute(DefaultTaskPlanExecutor.java:104) at org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker$1.execute(DefaultTaskPlanExecutor.java:98) at org.gradle.execution.taskgraph.DefaultTaskExecutionPlan.execute(DefaultTaskExecutionPlan.java:626) at org.gradle.execution.taskgraph.DefaultTaskExecutionPlan.executeWithTask(DefaultTaskExecutionPlan.java:581) at org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker.run(DefaultTaskPlanExecutor.java:98) at org.gradle.internal.concurrent.ExecutorPolicy$CatchAndRecordFailures.onExecute(ExecutorPolicy.java:63) at org.gradle.internal.concurrent.ManagedExecutorImpl$1.run(ManagedExecutorImpl.java:46) at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1144) at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:642) at org.gradle.internal.concurrent.ThreadFactoryImpl$ManagedThreadRunnable.run(ThreadFactoryImpl.java:55) at java.base/java.lang.Thread.run(Thread.java:1583) Malformed class file [AlignmentTrackEvent.class] found on compile classpath, which means that this class will cause a compile error if referenced in a source file. Gradle 5.0 will no longer allow malformed classes on compile classpath. at org.gradle.api.internal.changedetection.state.AbiExtractingClasspathResourceHasher.hash(AbiExtractingClasspathResourceHasher.java:60) at org.gradle.api.internal.changedetection.state.ResourceSnapshotterCacheService.hashFile(ResourceSnapshotterCacheService.java:44) at org.gradle.api.internal.changedetection.state.CachingResourceHasher.hash(CachingResourceHasher.java:47) at org.gradle.api.internal.changedetection.state.ClasspathEntrySnapshotBuilder.visitFileSnapshot(ClasspathEntrySnapshotBuilder.java:62) at org.gradle.api.internal.changedetection.state.FileTree.visit(FileTree.java:36) at org.gradle.api.internal.changedetection.state.AbstractClasspathSnapshotBuilder.visitFileTreeSnapshot(AbstractClasspathSnapshotBuilder.java:66) at org.gradle.api.internal.changedetection.state.AbstractFileCollectionSnapshotter$FileCollectionVisitorImpl.visitDirectoryTree(AbstractFileCollectionSnapshotter.java:100) at org.gradle.api.internal.changedetection.state.AbstractFileCollectionSnapshotter$FileCollectionVisitorImpl.visitCollection(AbstractFileCollectionSnapshotter.java:82) at org.gradle.api.internal.file.AbstractFileCollection.visitRootElements(AbstractFileCollection.java:234) at org.gradle.api.internal.file.CompositeFileCollection.visitRootElements(CompositeFileCollection.java:185) at org.gradle.api.internal.changedetection.state.AbstractFileCollectionSnapshotter.snapshot(AbstractFileCollectionSnapshotter.java:53) at org.gradle.api.internal.changedetection.state.DefaultCompileClasspathSnapshotter.snapshot(DefaultCompileClasspathSnapshotter.java:38) at org.gradle.api.internal.changedetection.state.CacheBackedTaskHistoryRepository.snapshotTaskFiles(CacheBackedTaskHistoryRepository.java:331) at org.gradle.api.internal.changedetection.state.CacheBackedTaskHistoryRepository.createExecution(CacheBackedTaskHistoryRepository.java:154) at org.gradle.api.internal.changedetection.state.CacheBackedTaskHistoryRepository.access$100(CacheBackedTaskHistoryRepository.java:61) at org.gradle.api.internal.changedetection.state.CacheBackedTaskHistoryRepository$1.getCurrentExecution(CacheBackedTaskHistoryRepository.java:114) at org.gradle.api.internal.changedetection.changes.DefaultTaskArtifactStateRepository$TaskArtifactStateImpl.getStates(DefaultTaskArtifactStateRepository.java:201) at org.gradle.api.internal.changedetection.changes.DefaultTaskArtifactStateRepository$TaskArtifactStateImpl.isUpToDate(DefaultTaskArtifactStateRepository.java:86) at org.gradle.api.internal.tasks.execution.SkipUpToDateTaskExecuter.execute(SkipUpToDateTaskExecuter.java:53) at org.gradle.api.internal.tasks.execution.ResolveTaskOutputCachingStateExecuter.execute(ResolveTaskOutputCachingStateExecuter.java:54) at org.gradle.api.internal.tasks.execution.ValidatingTaskExecuter.execute(ValidatingTaskExecuter.java:60) at org.gradle.api.internal.tasks.execution.SkipEmptySourceFilesTaskExecuter.execute(SkipEmptySourceFilesTaskExecuter.java:97) at org.gradle.api.internal.tasks.execution.CleanupStaleOutputsExecuter.execute(CleanupStaleOutputsExecuter.java:87) at org.gradle.api.internal.tasks.execution.ResolveTaskArtifactStateTaskExecuter.execute(ResolveTaskArtifactStateTaskExecuter.java:52) at org.gradle.api.internal.tasks.execution.SkipTaskWithNoActionsExecuter.execute(SkipTaskWithNoActionsExecuter.java:52) at org.gradle.api.internal.tasks.execution.SkipOnlyIfTaskExecuter.execute(SkipOnlyIfTaskExecuter.java:54) at org.gradle.api.internal.tasks.execution.ExecuteAtMostOnceTaskExecuter.execute(ExecuteAtMostOnceTaskExecuter.java:43) at org.gradle.api.internal.tasks.execution.CatchExceptionTaskExecuter.execute(CatchExceptionTaskExecuter.java:34) at org.gradle.execution.taskgraph.DefaultTaskGraphExecuter$EventFiringTaskWorker$1.run(DefaultTaskGraphExecuter.java:248) at org.gradle.internal.progress.DefaultBuildOperationExecutor$RunnableBuildOperationWorker.execute(DefaultBuildOperationExecutor.java:336) at org.gradle.internal.progress.DefaultBuildOperationExecutor$RunnableBuildOperationWorker.execute(DefaultBuildOperationExecutor.java:328) at org.gradle.internal.progress.DefaultBuildOperationExecutor.execute(DefaultBuildOperationExecutor.java:199) at org.gradle.internal.progress.DefaultBuildOperationExecutor.run(DefaultBuildOperationExecutor.java:110) at org.gradle.execution.taskgraph.DefaultTaskGraphExecuter$EventFiringTaskWorker.execute(DefaultTaskGraphExecuter.java:241) at org.gradle.execution.taskgraph.DefaultTaskGraphExecuter$EventFiringTaskWorker.execute(DefaultTaskGraphExecuter.java:230) at org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker.processTask(DefaultTaskPlanExecutor.java:123) at org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker.access$200(DefaultTaskPlanExecutor.java:79) at org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker$1.execute(DefaultTaskPlanExecutor.java:104) at org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker$1.execute(DefaultTaskPlanExecutor.java:98) at org.gradle.execution.taskgraph.DefaultTaskExecutionPlan.execute(DefaultTaskExecutionPlan.java:626) at org.gradle.execution.taskgraph.DefaultTaskExecutionPlan.executeWithTask(DefaultTaskExecutionPlan.java:581) at org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker.run(DefaultTaskPlanExecutor.java:98) at org.gradle.internal.concurrent.ExecutorPolicy$CatchAndRecordFailures.onExecute(ExecutorPolicy.java:63) at org.gradle.internal.concurrent.ManagedExecutorImpl$1.run(ManagedExecutorImpl.java:46) at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1144) at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:642) at org.gradle.internal.concurrent.ThreadFactoryImpl$ManagedThreadRunnable.run(ThreadFactoryImpl.java:55) at java.base/java.lang.Thread.run(Thread.java:1583) Malformed class file [GenomeChangeEvent.class] found on compile classpath, which means that this class will cause a compile error if referenced in a source file. Gradle 5.0 will no longer allow malformed classes on compile classpath. at org.gradle.api.internal.changedetection.state.AbiExtractingClasspathResourceHasher.hash(AbiExtractingClasspathResourceHasher.java:60) at org.gradle.api.internal.changedetection.state.ResourceSnapshotterCacheService.hashFile(ResourceSnapshotterCacheService.java:44) at org.gradle.api.internal.changedetection.state.CachingResourceHasher.hash(CachingResourceHasher.java:47) at org.gradle.api.internal.changedetection.state.ClasspathEntrySnapshotBuilder.visitFileSnapshot(ClasspathEntrySnapshotBuilder.java:62) at org.gradle.api.internal.changedetection.state.FileTree.visit(FileTree.java:36) at org.gradle.api.internal.changedetection.state.AbstractClasspathSnapshotBuilder.visitFileTreeSnapshot(AbstractClasspathSnapshotBuilder.java:66) at org.gradle.api.internal.changedetection.state.AbstractFileCollectionSnapshotter$FileCollectionVisitorImpl.visitDirectoryTree(AbstractFileCollectionSnapshotter.java:100) at org.gradle.api.internal.changedetection.state.AbstractFileCollectionSnapshotter$FileCollectionVisitorImpl.visitCollection(AbstractFileCollectionSnapshotter.java:82) at org.gradle.api.internal.file.AbstractFileCollection.visitRootElements(AbstractFileCollection.java:234) at org.gradle.api.internal.file.CompositeFileCollection.visitRootElements(CompositeFileCollection.java:185) at org.gradle.api.internal.changedetection.state.AbstractFileCollectionSnapshotter.snapshot(AbstractFileCollectionSnapshotter.java:53) at org.gradle.api.internal.changedetection.state.DefaultCompileClasspathSnapshotter.snapshot(DefaultCompileClasspathSnapshotter.java:38) at org.gradle.api.internal.changedetection.state.CacheBackedTaskHistoryRepository.snapshotTaskFiles(CacheBackedTaskHistoryRepository.java:331) at org.gradle.api.internal.changedetection.state.CacheBackedTaskHistoryRepository.createExecution(CacheBackedTaskHistoryRepository.java:154) at org.gradle.api.internal.changedetection.state.CacheBackedTaskHistoryRepository.access$100(CacheBackedTaskHistoryRepository.java:61) at org.gradle.api.internal.changedetection.state.CacheBackedTaskHistoryRepository$1.getCurrentExecution(CacheBackedTaskHistoryRepository.java:114) at org.gradle.api.internal.changedetection.changes.DefaultTaskArtifactStateRepository$TaskArtifactStateImpl.getStates(DefaultTaskArtifactStateRepository.java:201) at org.gradle.api.internal.changedetection.changes.DefaultTaskArtifactStateRepository$TaskArtifactStateImpl.isUpToDate(DefaultTaskArtifactStateRepository.java:86) at org.gradle.api.internal.tasks.execution.SkipUpToDateTaskExecuter.execute(SkipUpToDateTaskExecuter.java:53) at org.gradle.api.internal.tasks.execution.ResolveTaskOutputCachingStateExecuter.execute(ResolveTaskOutputCachingStateExecuter.java:54) at org.gradle.api.internal.tasks.execution.ValidatingTaskExecuter.execute(ValidatingTaskExecuter.java:60) at org.gradle.api.internal.tasks.execution.SkipEmptySourceFilesTaskExecuter.execute(SkipEmptySourceFilesTaskExecuter.java:97) at org.gradle.api.internal.tasks.execution.CleanupStaleOutputsExecuter.execute(CleanupStaleOutputsExecuter.java:87) at org.gradle.api.internal.tasks.execution.ResolveTaskArtifactStateTaskExecuter.execute(ResolveTaskArtifactStateTaskExecuter.java:52) at org.gradle.api.internal.tasks.execution.SkipTaskWithNoActionsExecuter.execute(SkipTaskWithNoActionsExecuter.java:52) at org.gradle.api.internal.tasks.execution.SkipOnlyIfTaskExecuter.execute(SkipOnlyIfTaskExecuter.java:54) at org.gradle.api.internal.tasks.execution.ExecuteAtMostOnceTaskExecuter.execute(ExecuteAtMostOnceTaskExecuter.java:43) at org.gradle.api.internal.tasks.execution.CatchExceptionTaskExecuter.execute(CatchExceptionTaskExecuter.java:34) at org.gradle.execution.taskgraph.DefaultTaskGraphExecuter$EventFiringTaskWorker$1.run(DefaultTaskGraphExecuter.java:248) at org.gradle.internal.progress.DefaultBuildOperationExecutor$RunnableBuildOperationWorker.execute(DefaultBuildOperationExecutor.java:336) at org.gradle.internal.progress.DefaultBuildOperationExecutor$RunnableBuildOperationWorker.execute(DefaultBuildOperationExecutor.java:328) at org.gradle.internal.progress.DefaultBuildOperationExecutor.execute(DefaultBuildOperationExecutor.java:199) at org.gradle.internal.progress.DefaultBuildOperationExecutor.run(DefaultBuildOperationExecutor.java:110) at org.gradle.execution.taskgraph.DefaultTaskGraphExecuter$EventFiringTaskWorker.execute(DefaultTaskGraphExecuter.java:241) at org.gradle.execution.taskgraph.DefaultTaskGraphExecuter$EventFiringTaskWorker.execute(DefaultTaskGraphExecuter.java:230) at org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker.processTask(DefaultTaskPlanExecutor.java:123) at org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker.access$200(DefaultTaskPlanExecutor.java:79) at org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker$1.execute(DefaultTaskPlanExecutor.java:104) at org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker$1.execute(DefaultTaskPlanExecutor.java:98) at org.gradle.execution.taskgraph.DefaultTaskExecutionPlan.execute(DefaultTaskExecutionPlan.java:626) at org.gradle.execution.taskgraph.DefaultTaskExecutionPlan.executeWithTask(DefaultTaskExecutionPlan.java:581) at org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker.run(DefaultTaskPlanExecutor.java:98) at org.gradle.internal.concurrent.ExecutorPolicy$CatchAndRecordFailures.onExecute(ExecutorPolicy.java:63) at org.gradle.internal.concurrent.ManagedExecutorImpl$1.run(ManagedExecutorImpl.java:46) at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1144) at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:642) at org.gradle.internal.concurrent.ThreadFactoryImpl$ManagedThreadRunnable.run(ThreadFactoryImpl.java:55) at java.base/java.lang.Thread.run(Thread.java:1583) Malformed class file [DataLoadedEvent.class] found on compile classpath, which means that this class will cause a compile error if referenced in a source file. Gradle 5.0 will no longer allow malformed classes on compile classpath. at org.gradle.api.internal.changedetection.state.AbiExtractingClasspathResourceHasher.hash(AbiExtractingClasspathResourceHasher.java:60) at org.gradle.api.internal.changedetection.state.ResourceSnapshotterCacheService.hashFile(ResourceSnapshotterCacheService.java:44) at org.gradle.api.internal.changedetection.state.CachingResourceHasher.hash(CachingResourceHasher.java:47) at org.gradle.api.internal.changedetection.state.ClasspathEntrySnapshotBuilder.visitFileSnapshot(ClasspathEntrySnapshotBuilder.java:62) at org.gradle.api.internal.changedetection.state.FileTree.visit(FileTree.java:36) at org.gradle.api.internal.changedetection.state.AbstractClasspathSnapshotBuilder.visitFileTreeSnapshot(AbstractClasspathSnapshotBuilder.java:66) at org.gradle.api.internal.changedetection.state.AbstractFileCollectionSnapshotter$FileCollectionVisitorImpl.visitDirectoryTree(AbstractFileCollectionSnapshotter.java:100) at org.gradle.api.internal.changedetection.state.AbstractFileCollectionSnapshotter$FileCollectionVisitorImpl.visitCollection(AbstractFileCollectionSnapshotter.java:82) at org.gradle.api.internal.file.AbstractFileCollection.visitRootElements(AbstractFileCollection.java:234) at org.gradle.api.internal.file.CompositeFileCollection.visitRootElements(CompositeFileCollection.java:185) at org.gradle.api.internal.changedetection.state.AbstractFileCollectionSnapshotter.snapshot(AbstractFileCollectionSnapshotter.java:53) at org.gradle.api.internal.changedetection.state.DefaultCompileClasspathSnapshotter.snapshot(DefaultCompileClasspathSnapshotter.java:38) at org.gradle.api.internal.changedetection.state.CacheBackedTaskHistoryRepository.snapshotTaskFiles(CacheBackedTaskHistoryRepository.java:331) at org.gradle.api.internal.changedetection.state.CacheBackedTaskHistoryRepository.createExecution(CacheBackedTaskHistoryRepository.java:154) at org.gradle.api.internal.changedetection.state.CacheBackedTaskHistoryRepository.access$100(CacheBackedTaskHistoryRepository.java:61) at org.gradle.api.internal.changedetection.state.CacheBackedTaskHistoryRepository$1.getCurrentExecution(CacheBackedTaskHistoryRepository.java:114) at org.gradle.api.internal.changedetection.changes.DefaultTaskArtifactStateRepository$TaskArtifactStateImpl.getStates(DefaultTaskArtifactStateRepository.java:201) at org.gradle.api.internal.changedetection.changes.DefaultTaskArtifactStateRepository$TaskArtifactStateImpl.isUpToDate(DefaultTaskArtifactStateRepository.java:86) at org.gradle.api.internal.tasks.execution.SkipUpToDateTaskExecuter.execute(SkipUpToDateTaskExecuter.java:53) at org.gradle.api.internal.tasks.execution.ResolveTaskOutputCachingStateExecuter.execute(ResolveTaskOutputCachingStateExecuter.java:54) at org.gradle.api.internal.tasks.execution.ValidatingTaskExecuter.execute(ValidatingTaskExecuter.java:60) at org.gradle.api.internal.tasks.execution.SkipEmptySourceFilesTaskExecuter.execute(SkipEmptySourceFilesTaskExecuter.java:97) at org.gradle.api.internal.tasks.execution.CleanupStaleOutputsExecuter.execute(CleanupStaleOutputsExecuter.java:87) at org.gradle.api.internal.tasks.execution.ResolveTaskArtifactStateTaskExecuter.execute(ResolveTaskArtifactStateTaskExecuter.java:52) at org.gradle.api.internal.tasks.execution.SkipTaskWithNoActionsExecuter.execute(SkipTaskWithNoActionsExecuter.java:52) at org.gradle.api.internal.tasks.execution.SkipOnlyIfTaskExecuter.execute(SkipOnlyIfTaskExecuter.java:54) at org.gradle.api.internal.tasks.execution.ExecuteAtMostOnceTaskExecuter.execute(ExecuteAtMostOnceTaskExecuter.java:43) at org.gradle.api.internal.tasks.execution.CatchExceptionTaskExecuter.execute(CatchExceptionTaskExecuter.java:34) at org.gradle.execution.taskgraph.DefaultTaskGraphExecuter$EventFiringTaskWorker$1.run(DefaultTaskGraphExecuter.java:248) at org.gradle.internal.progress.DefaultBuildOperationExecutor$RunnableBuildOperationWorker.execute(DefaultBuildOperationExecutor.java:336) at org.gradle.internal.progress.DefaultBuildOperationExecutor$RunnableBuildOperationWorker.execute(DefaultBuildOperationExecutor.java:328) at org.gradle.internal.progress.DefaultBuildOperationExecutor.execute(DefaultBuildOperationExecutor.java:199) at org.gradle.internal.progress.DefaultBuildOperationExecutor.run(DefaultBuildOperationExecutor.java:110) at org.gradle.execution.taskgraph.DefaultTaskGraphExecuter$EventFiringTaskWorker.execute(DefaultTaskGraphExecuter.java:241) at org.gradle.execution.taskgraph.DefaultTaskGraphExecuter$EventFiringTaskWorker.execute(DefaultTaskGraphExecuter.java:230) at org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker.processTask(DefaultTaskPlanExecutor.java:123) at org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker.access$200(DefaultTaskPlanExecutor.java:79) at org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker$1.execute(DefaultTaskPlanExecutor.java:104) at org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker$1.execute(DefaultTaskPlanExecutor.java:98) at org.gradle.execution.taskgraph.DefaultTaskExecutionPlan.execute(DefaultTaskExecutionPlan.java:626) at org.gradle.execution.taskgraph.DefaultTaskExecutionPlan.executeWithTask(DefaultTaskExecutionPlan.java:581) at org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker.run(DefaultTaskPlanExecutor.java:98) at org.gradle.internal.concurrent.ExecutorPolicy$CatchAndRecordFailures.onExecute(ExecutorPolicy.java:63) at org.gradle.internal.concurrent.ManagedExecutorImpl$1.run(ManagedExecutorImpl.java:46) at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1144) at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:642) at org.gradle.internal.concurrent.ThreadFactoryImpl$ManagedThreadRunnable.run(ThreadFactoryImpl.java:55) at java.base/java.lang.Thread.run(Thread.java:1583) Malformed class file [FrameManager$ChangeEvent.class] found on compile classpath, which means that this class will cause a compile error if referenced in a source file. Gradle 5.0 will no longer allow malformed classes on compile classpath. at org.gradle.api.internal.changedetection.state.AbiExtractingClasspathResourceHasher.hash(AbiExtractingClasspathResourceHasher.java:60) at org.gradle.api.internal.changedetection.state.ResourceSnapshotterCacheService.hashFile(ResourceSnapshotterCacheService.java:44) at org.gradle.api.internal.changedetection.state.CachingResourceHasher.hash(CachingResourceHasher.java:47) at org.gradle.api.internal.changedetection.state.ClasspathEntrySnapshotBuilder.visitFileSnapshot(ClasspathEntrySnapshotBuilder.java:62) at org.gradle.api.internal.changedetection.state.FileTree.visit(FileTree.java:36) at org.gradle.api.internal.changedetection.state.AbstractClasspathSnapshotBuilder.visitFileTreeSnapshot(AbstractClasspathSnapshotBuilder.java:66) at org.gradle.api.internal.changedetection.state.AbstractFileCollectionSnapshotter$FileCollectionVisitorImpl.visitDirectoryTree(AbstractFileCollectionSnapshotter.java:100) at org.gradle.api.internal.changedetection.state.AbstractFileCollectionSnapshotter$FileCollectionVisitorImpl.visitCollection(AbstractFileCollectionSnapshotter.java:82) at org.gradle.api.internal.file.AbstractFileCollection.visitRootElements(AbstractFileCollection.java:234) at org.gradle.api.internal.file.CompositeFileCollection.visitRootElements(CompositeFileCollection.java:185) at org.gradle.api.internal.changedetection.state.AbstractFileCollectionSnapshotter.snapshot(AbstractFileCollectionSnapshotter.java:53) at org.gradle.api.internal.changedetection.state.DefaultCompileClasspathSnapshotter.snapshot(DefaultCompileClasspathSnapshotter.java:38) at org.gradle.api.internal.changedetection.state.CacheBackedTaskHistoryRepository.snapshotTaskFiles(CacheBackedTaskHistoryRepository.java:331) at org.gradle.api.internal.changedetection.state.CacheBackedTaskHistoryRepository.createExecution(CacheBackedTaskHistoryRepository.java:154) at org.gradle.api.internal.changedetection.state.CacheBackedTaskHistoryRepository.access$100(CacheBackedTaskHistoryRepository.java:61) at org.gradle.api.internal.changedetection.state.CacheBackedTaskHistoryRepository$1.getCurrentExecution(CacheBackedTaskHistoryRepository.java:114) at org.gradle.api.internal.changedetection.changes.DefaultTaskArtifactStateRepository$TaskArtifactStateImpl.getStates(DefaultTaskArtifactStateRepository.java:201) at org.gradle.api.internal.changedetection.changes.DefaultTaskArtifactStateRepository$TaskArtifactStateImpl.isUpToDate(DefaultTaskArtifactStateRepository.java:86) at org.gradle.api.internal.tasks.execution.SkipUpToDateTaskExecuter.execute(SkipUpToDateTaskExecuter.java:53) at org.gradle.api.internal.tasks.execution.ResolveTaskOutputCachingStateExecuter.execute(ResolveTaskOutputCachingStateExecuter.java:54) at org.gradle.api.internal.tasks.execution.ValidatingTaskExecuter.execute(ValidatingTaskExecuter.java:60) at org.gradle.api.internal.tasks.execution.SkipEmptySourceFilesTaskExecuter.execute(SkipEmptySourceFilesTaskExecuter.java:97) at org.gradle.api.internal.tasks.execution.CleanupStaleOutputsExecuter.execute(CleanupStaleOutputsExecuter.java:87) at org.gradle.api.internal.tasks.execution.ResolveTaskArtifactStateTaskExecuter.execute(ResolveTaskArtifactStateTaskExecuter.java:52) at org.gradle.api.internal.tasks.execution.SkipTaskWithNoActionsExecuter.execute(SkipTaskWithNoActionsExecuter.java:52) at org.gradle.api.internal.tasks.execution.SkipOnlyIfTaskExecuter.execute(SkipOnlyIfTaskExecuter.java:54) at org.gradle.api.internal.tasks.execution.ExecuteAtMostOnceTaskExecuter.execute(ExecuteAtMostOnceTaskExecuter.java:43) at org.gradle.api.internal.tasks.execution.CatchExceptionTaskExecuter.execute(CatchExceptionTaskExecuter.java:34) at org.gradle.execution.taskgraph.DefaultTaskGraphExecuter$EventFiringTaskWorker$1.run(DefaultTaskGraphExecuter.java:248) at org.gradle.internal.progress.DefaultBuildOperationExecutor$RunnableBuildOperationWorker.execute(DefaultBuildOperationExecutor.java:336) at org.gradle.internal.progress.DefaultBuildOperationExecutor$RunnableBuildOperationWorker.execute(DefaultBuildOperationExecutor.java:328) at org.gradle.internal.progress.DefaultBuildOperationExecutor.execute(DefaultBuildOperationExecutor.java:199) at org.gradle.internal.progress.DefaultBuildOperationExecutor.run(DefaultBuildOperationExecutor.java:110) at org.gradle.execution.taskgraph.DefaultTaskGraphExecuter$EventFiringTaskWorker.execute(DefaultTaskGraphExecuter.java:241) at org.gradle.execution.taskgraph.DefaultTaskGraphExecuter$EventFiringTaskWorker.execute(DefaultTaskGraphExecuter.java:230) at org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker.processTask(DefaultTaskPlanExecutor.java:123) at org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker.access$200(DefaultTaskPlanExecutor.java:79) at org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker$1.execute(DefaultTaskPlanExecutor.java:104) at org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker$1.execute(DefaultTaskPlanExecutor.java:98) at org.gradle.execution.taskgraph.DefaultTaskExecutionPlan.execute(DefaultTaskExecutionPlan.java:626) at org.gradle.execution.taskgraph.DefaultTaskExecutionPlan.executeWithTask(DefaultTaskExecutionPlan.java:581) at org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker.run(DefaultTaskPlanExecutor.java:98) at org.gradle.internal.concurrent.ExecutorPolicy$CatchAndRecordFailures.onExecute(ExecutorPolicy.java:63) at org.gradle.internal.concurrent.ManagedExecutorImpl$1.run(ManagedExecutorImpl.java:46) at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1144) at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:642) at org.gradle.internal.concurrent.ThreadFactoryImpl$ManagedThreadRunnable.run(ThreadFactoryImpl.java:55) at java.base/java.lang.Thread.run(Thread.java:1583) Malformed class file [OAuthProvider$AuthStateEvent.class] found on compile classpath, which means that this class will cause a compile error if referenced in a source file. Gradle 5.0 will no longer allow malformed classes on compile classpath. at org.gradle.api.internal.changedetection.state.AbiExtractingClasspathResourceHasher.hash(AbiExtractingClasspathResourceHasher.java:60) at org.gradle.api.internal.changedetection.state.ResourceSnapshotterCacheService.hashFile(ResourceSnapshotterCacheService.java:44) at org.gradle.api.internal.changedetection.state.CachingResourceHasher.hash(CachingResourceHasher.java:47) at org.gradle.api.internal.changedetection.state.ClasspathEntrySnapshotBuilder.visitFileSnapshot(ClasspathEntrySnapshotBuilder.java:62) at org.gradle.api.internal.changedetection.state.FileTree.visit(FileTree.java:36) at org.gradle.api.internal.changedetection.state.AbstractClasspathSnapshotBuilder.visitFileTreeSnapshot(AbstractClasspathSnapshotBuilder.java:66) at org.gradle.api.internal.changedetection.state.AbstractFileCollectionSnapshotter$FileCollectionVisitorImpl.visitDirectoryTree(AbstractFileCollectionSnapshotter.java:100) at org.gradle.api.internal.changedetection.state.AbstractFileCollectionSnapshotter$FileCollectionVisitorImpl.visitCollection(AbstractFileCollectionSnapshotter.java:82) at org.gradle.api.internal.file.AbstractFileCollection.visitRootElements(AbstractFileCollection.java:234) at org.gradle.api.internal.file.CompositeFileCollection.visitRootElements(CompositeFileCollection.java:185) at org.gradle.api.internal.changedetection.state.AbstractFileCollectionSnapshotter.snapshot(AbstractFileCollectionSnapshotter.java:53) at org.gradle.api.internal.changedetection.state.DefaultCompileClasspathSnapshotter.snapshot(DefaultCompileClasspathSnapshotter.java:38) at org.gradle.api.internal.changedetection.state.CacheBackedTaskHistoryRepository.snapshotTaskFiles(CacheBackedTaskHistoryRepository.java:331) at org.gradle.api.internal.changedetection.state.CacheBackedTaskHistoryRepository.createExecution(CacheBackedTaskHistoryRepository.java:154) at org.gradle.api.internal.changedetection.state.CacheBackedTaskHistoryRepository.access$100(CacheBackedTaskHistoryRepository.java:61) at org.gradle.api.internal.changedetection.state.CacheBackedTaskHistoryRepository$1.getCurrentExecution(CacheBackedTaskHistoryRepository.java:114) at org.gradle.api.internal.changedetection.changes.DefaultTaskArtifactStateRepository$TaskArtifactStateImpl.getStates(DefaultTaskArtifactStateRepository.java:201) at org.gradle.api.internal.changedetection.changes.DefaultTaskArtifactStateRepository$TaskArtifactStateImpl.isUpToDate(DefaultTaskArtifactStateRepository.java:86) at org.gradle.api.internal.tasks.execution.SkipUpToDateTaskExecuter.execute(SkipUpToDateTaskExecuter.java:53) at org.gradle.api.internal.tasks.execution.ResolveTaskOutputCachingStateExecuter.execute(ResolveTaskOutputCachingStateExecuter.java:54) at org.gradle.api.internal.tasks.execution.ValidatingTaskExecuter.execute(ValidatingTaskExecuter.java:60) at org.gradle.api.internal.tasks.execution.SkipEmptySourceFilesTaskExecuter.execute(SkipEmptySourceFilesTaskExecuter.java:97) at org.gradle.api.internal.tasks.execution.CleanupStaleOutputsExecuter.execute(CleanupStaleOutputsExecuter.java:87) at org.gradle.api.internal.tasks.execution.ResolveTaskArtifactStateTaskExecuter.execute(ResolveTaskArtifactStateTaskExecuter.java:52) at org.gradle.api.internal.tasks.execution.SkipTaskWithNoActionsExecuter.execute(SkipTaskWithNoActionsExecuter.java:52) at org.gradle.api.internal.tasks.execution.SkipOnlyIfTaskExecuter.execute(SkipOnlyIfTaskExecuter.java:54) at org.gradle.api.internal.tasks.execution.ExecuteAtMostOnceTaskExecuter.execute(ExecuteAtMostOnceTaskExecuter.java:43) at org.gradle.api.internal.tasks.execution.CatchExceptionTaskExecuter.execute(CatchExceptionTaskExecuter.java:34) at org.gradle.execution.taskgraph.DefaultTaskGraphExecuter$EventFiringTaskWorker$1.run(DefaultTaskGraphExecuter.java:248) at org.gradle.internal.progress.DefaultBuildOperationExecutor$RunnableBuildOperationWorker.execute(DefaultBuildOperationExecutor.java:336) at org.gradle.internal.progress.DefaultBuildOperationExecutor$RunnableBuildOperationWorker.execute(DefaultBuildOperationExecutor.java:328) at org.gradle.internal.progress.DefaultBuildOperationExecutor.execute(DefaultBuildOperationExecutor.java:199) at org.gradle.internal.progress.DefaultBuildOperationExecutor.run(DefaultBuildOperationExecutor.java:110) at org.gradle.execution.taskgraph.DefaultTaskGraphExecuter$EventFiringTaskWorker.execute(DefaultTaskGraphExecuter.java:241) at org.gradle.execution.taskgraph.DefaultTaskGraphExecuter$EventFiringTaskWorker.execute(DefaultTaskGraphExecuter.java:230) at org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker.processTask(DefaultTaskPlanExecutor.java:123) at org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker.access$200(DefaultTaskPlanExecutor.java:79) at org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker$1.execute(DefaultTaskPlanExecutor.java:104) at org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker$1.execute(DefaultTaskPlanExecutor.java:98) at org.gradle.execution.taskgraph.DefaultTaskExecutionPlan.execute(DefaultTaskExecutionPlan.java:626) at org.gradle.execution.taskgraph.DefaultTaskExecutionPlan.executeWithTask(DefaultTaskExecutionPlan.java:581) at org.gradle.execution.taskgraph.DefaultTaskPlanExecutor$TaskExecutorWorker.run(DefaultTaskPlanExecutor.java:98) at org.gradle.internal.concurrent.ExecutorPolicy$CatchAndRecordFailures.onExecute(ExecutorPolicy.java:63) at org.gradle.internal.concurrent.ManagedExecutorImpl$1.run(ManagedExecutorImpl.java:46) at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1144) at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:642) at org.gradle.internal.concurrent.ThreadFactoryImpl$ManagedThreadRunnable.run(ThreadFactoryImpl.java:55) at java.base/java.lang.Thread.run(Thread.java:1583) Replacing junit:junit:jar:4.13.1 -> junit:junit:jar:4.x Ignoring com.sparkjava:spark-core:jar:2.9.4 Ignoring org.glassfish.jersey.core:jersey-common:jar:2.34 Passing through org.hamcrest:hamcrest:jar:debian file or directory '/build/reproducible-path/igv-2.18.5+dfsg/lib', not found file or directory '/build/reproducible-path/igv-2.18.5+dfsg/lib', not found Up-to-date check for task ':compileTestJava' took 1.197 secs. It is not up-to-date because: No history is available. All input files are considered out-of-date for incremental task ':compileTestJava'. file or directory '/build/reproducible-path/igv-2.18.5+dfsg/lib', not found file or directory '/build/reproducible-path/igv-2.18.5+dfsg/lib', not found Compiling with JDK Java compiler API. Note: Some input files use or override a deprecated API. Note: Recompile with -Xlint:deprecation for details. Note: Some input files use unchecked or unsafe operations. Note: Recompile with -Xlint:unchecked for details. :compileTestJava (Thread[#85,Task worker for ':' Thread 2,5,main]) completed. Took 4.828 secs. :processTestResources (Thread[#85,Task worker for ':' Thread 2,5,main]) started. :processTestResources Putting task artifact state for task ':processTestResources' into context took 0.0 secs. file or directory '/build/reproducible-path/igv-2.18.5+dfsg/src/test/resources', not found Skipping task ':processTestResources' as it has no source files and no previous output files. :processTestResources NO-SOURCE :processTestResources (Thread[#85,Task worker for ':' Thread 2,5,main]) completed. Took 0.003 secs. :testClasses (Thread[#85,Task worker for ':' Thread 2,5,main]) started. :testClasses Skipping task ':testClasses' as it has no actions. :testClasses (Thread[#85,Task worker for ':' Thread 2,5,main]) completed. Took 0.0 secs. :test (Thread[#85,Task worker for ':' Thread 2,5,main]) started. :test Putting task artifact state for task ':test' into context took 0.0 secs. Replacing org.junit.vintage:junit-vintage-engine:jar:5.8.2 -> org.junit.vintage:junit-vintage-engine:jar:debian Passing through org.junit:junit-parent:jar:debian Replacing org.junit.platform:junit-platform-engine:jar:1.9.1 -> org.junit.platform:junit-platform-engine:jar:debian Passing through org.apiguardian:apiguardian-api:jar:debian Passing through org.opentest4j:opentest4j:jar:debian Passing through org.junit.platform:junit-platform-commons:jar:debian file or directory '/build/reproducible-path/igv-2.18.5+dfsg/lib', not found Up-to-date check for task ':test' took 0.516 secs. It is not up-to-date because: No history is available. file or directory '/build/reproducible-path/igv-2.18.5+dfsg/lib', not found Starting process 'Gradle Test Executor 1'. Working directory: /build/reproducible-path/igv-2.18.5+dfsg Command: /usr/lib/jvm/java-21-openjdk-amd64/bin/java -Ddebian.package=igv -Dfile.separator=/ -Dignore.ioexceptions=false -Dinclude.longrunning=false -Djava.awt.headless=true -Djava.class.path=/usr/share/gradle/lib/gradle-launcher-4.4.1.jar -Djava.class.version=65.0 -Djava.home=/usr/lib/jvm/java-21-openjdk-amd64 -Djava.library.path=/usr/java/packages/lib:/usr/lib/x86_64-linux-gnu/jni:/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu:/usr/lib/jni:/lib:/usr/lib -Djava.runtime.name=OpenJDK Runtime Environment -Djava.runtime.version=21.0.5+11-Debian-1 -Djava.specification.name=Java Platform API Specification -Djava.specification.vendor=Oracle Corporation -Djava.specification.version=21 -Djava.vendor=Debian -Djava.vendor.url=https://tracker.debian.org/openjdk-21 -Djava.vendor.url.bug=https://bugs.debian.org/openjdk-21 -Djava.version=21.0.5 -Djava.version.date=2024-10-15 -Djava.vm.compressedOopsMode=Zero based -Djava.vm.info=mixed mode, sharing -Djava.vm.name=OpenJDK 64-Bit Server VM -Djava.vm.specification.name=Java Virtual Machine Specification -Djava.vm.specification.vendor=Oracle Corporation -Djava.vm.specification.version=21 -Djava.vm.vendor=Debian -Djava.vm.version=21.0.5+11-Debian-1 -Djdk.debug=release -Dlibrary.jansi.path=/build/reproducible-path/igv-2.18.5+dfsg/.gradle/native/jansi/null/linux64 -Dline.separator= -Dmake.fail=false -Dnative.encoding=ANSI_X3.4-1968 -Dorg.gradle.appname=gradle -Dorg.gradle.jvmargs=-Xbootclasspath/a:/usr/share/java/gradle-helper-hook.jar:/usr/share/java/maven-repo-helper.jar -Dorg.gradle.native=false -Dos.arch=amd64 -Dos.name=Linux -Dos.version=6.11.5+bpo-amd64 -Dpath.separator=: -Dsamjdk.snappy.disable=true -Dstderr.encoding=ANSI_X3.4-1968 -Dstdout.encoding=ANSI_X3.4-1968 -Dsun.arch.data.model=64 -Dsun.boot.library.path=/usr/lib/jvm/java-21-openjdk-amd64/lib -Dsun.cpu.endian=little -Dsun.io.unicode.encoding=UnicodeLittle -Dsun.java.command=org.gradle.launcher.daemon.bootstrap.GradleDaemon 4.4.1 -Dsun.java.launcher=SUN_STANDARD -Dsun.jnu.encoding=ANSI_X3.4-1968 -Dsun.management.compiler=HotSpot 64-Bit Tiered Compilers -Duser.dir=/build/reproducible-path/igv-2.18.5+dfsg -Duser.home=. -Duser.name=debian -Duser.timezone=GMT-12:00 @/tmp/gradle-worker-classpath7851488389088569013txt -Xmx2g -Dfile.encoding=UTF-8 -Djava.io.tmpdir=/tmp -Duser.country=US -Duser.language=en -Duser.variant -ea worker.org.gradle.process.internal.worker.GradleWorkerMain 'Gradle Test Executor 1' Successfully started process 'Gradle Test Executor 1' Starting process 'Gradle Test Executor 2'. Working directory: /build/reproducible-path/igv-2.18.5+dfsg Command: /usr/lib/jvm/java-21-openjdk-amd64/bin/java -Ddebian.package=igv -Dfile.separator=/ -Dignore.ioexceptions=false -Dinclude.longrunning=false -Djava.awt.headless=true -Djava.class.path=/usr/share/gradle/lib/gradle-launcher-4.4.1.jar -Djava.class.version=65.0 -Djava.home=/usr/lib/jvm/java-21-openjdk-amd64 -Djava.library.path=/usr/java/packages/lib:/usr/lib/x86_64-linux-gnu/jni:/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu:/usr/lib/jni:/lib:/usr/lib -Djava.runtime.name=OpenJDK Runtime Environment -Djava.runtime.version=21.0.5+11-Debian-1 -Djava.specification.name=Java Platform API Specification -Djava.specification.vendor=Oracle Corporation -Djava.specification.version=21 -Djava.vendor=Debian -Djava.vendor.url=https://tracker.debian.org/openjdk-21 -Djava.vendor.url.bug=https://bugs.debian.org/openjdk-21 -Djava.version=21.0.5 -Djava.version.date=2024-10-15 -Djava.vm.compressedOopsMode=Zero based -Djava.vm.info=mixed mode, sharing -Djava.vm.name=OpenJDK 64-Bit Server VM -Djava.vm.specification.name=Java Virtual Machine Specification -Djava.vm.specification.vendor=Oracle Corporation -Djava.vm.specification.version=21 -Djava.vm.vendor=Debian -Djava.vm.version=21.0.5+11-Debian-1 -Djdk.debug=release -Dlibrary.jansi.path=/build/reproducible-path/igv-2.18.5+dfsg/.gradle/native/jansi/null/linux64 -Dline.separator= -Dmake.fail=false -Dnative.encoding=ANSI_X3.4-1968 -Dorg.gradle.appname=gradle -Dorg.gradle.jvmargs=-Xbootclasspath/a:/usr/share/java/gradle-helper-hook.jar:/usr/share/java/maven-repo-helper.jar -Dorg.gradle.native=false -Dos.arch=amd64 -Dos.name=Linux -Dos.version=6.11.5+bpo-amd64 -Dpath.separator=: -Dsamjdk.snappy.disable=true -Dstderr.encoding=ANSI_X3.4-1968 -Dstdout.encoding=ANSI_X3.4-1968 -Dsun.arch.data.model=64 -Dsun.boot.library.path=/usr/lib/jvm/java-21-openjdk-amd64/lib -Dsun.cpu.endian=little -Dsun.io.unicode.encoding=UnicodeLittle -Dsun.java.command=org.gradle.launcher.daemon.bootstrap.GradleDaemon 4.4.1 -Dsun.java.launcher=SUN_STANDARD -Dsun.jnu.encoding=ANSI_X3.4-1968 -Dsun.management.compiler=HotSpot 64-Bit Tiered Compilers -Duser.dir=/build/reproducible-path/igv-2.18.5+dfsg -Duser.home=. -Duser.name=debian -Duser.timezone=GMT-12:00 @/tmp/gradle-worker-classpath10725534982290922894txt -Xmx2g -Dfile.encoding=UTF-8 -Djava.io.tmpdir=/tmp -Duser.country=US -Duser.language=en -Duser.variant -ea worker.org.gradle.process.internal.worker.GradleWorkerMain 'Gradle Test Executor 2' Successfully started process 'Gradle Test Executor 2' Gradle Test Executor 1 started executing tests. Starting process 'Gradle Test Executor 4'. Working directory: /build/reproducible-path/igv-2.18.5+dfsg Command: /usr/lib/jvm/java-21-openjdk-amd64/bin/java -Ddebian.package=igv -Dfile.separator=/ -Dignore.ioexceptions=false -Dinclude.longrunning=false -Djava.awt.headless=true -Djava.class.path=/usr/share/gradle/lib/gradle-launcher-4.4.1.jar -Djava.class.version=65.0 -Djava.home=/usr/lib/jvm/java-21-openjdk-amd64 -Djava.library.path=/usr/java/packages/lib:/usr/lib/x86_64-linux-gnu/jni:/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu:/usr/lib/jni:/lib:/usr/lib -Djava.runtime.name=OpenJDK Runtime Environment -Djava.runtime.version=21.0.5+11-Debian-1 -Djava.specification.name=Java Platform API Specification -Djava.specification.vendor=Oracle Corporation -Djava.specification.version=21 -Djava.vendor=Debian -Djava.vendor.url=https://tracker.debian.org/openjdk-21 -Djava.vendor.url.bug=https://bugs.debian.org/openjdk-21 -Djava.version=21.0.5 -Djava.version.date=2024-10-15 -Djava.vm.compressedOopsMode=Zero based -Djava.vm.info=mixed mode, sharing -Djava.vm.name=OpenJDK 64-Bit Server VM -Djava.vm.specification.name=Java Virtual Machine Specification -Djava.vm.specification.vendor=Oracle Corporation -Djava.vm.specification.version=21 -Djava.vm.vendor=Debian -Djava.vm.version=21.0.5+11-Debian-1 -Djdk.debug=release -Dlibrary.jansi.path=/build/reproducible-path/igv-2.18.5+dfsg/.gradle/native/jansi/null/linux64 -Dline.separator= -Dmake.fail=false -Dnative.encoding=ANSI_X3.4-1968 -Dorg.gradle.appname=gradle -Dorg.gradle.jvmargs=-Xbootclasspath/a:/usr/share/java/gradle-helper-hook.jar:/usr/share/java/maven-repo-helper.jar -Dorg.gradle.native=false -Dos.arch=amd64 -Dos.name=Linux -Dos.version=6.11.5+bpo-amd64 -Dpath.separator=: -Dsamjdk.snappy.disable=true -Dstderr.encoding=ANSI_X3.4-1968 -Dstdout.encoding=ANSI_X3.4-1968 -Dsun.arch.data.model=64 -Dsun.boot.library.path=/usr/lib/jvm/java-21-openjdk-amd64/lib -Dsun.cpu.endian=little -Dsun.io.unicode.encoding=UnicodeLittle -Dsun.java.command=org.gradle.launcher.daemon.bootstrap.GradleDaemon 4.4.1 -Dsun.java.launcher=SUN_STANDARD -Dsun.jnu.encoding=ANSI_X3.4-1968 -Dsun.management.compiler=HotSpot 64-Bit Tiered Compilers -Duser.dir=/build/reproducible-path/igv-2.18.5+dfsg -Duser.home=. -Duser.name=debian -Duser.timezone=GMT-12:00 @/tmp/gradle-worker-classpath6692329076032837026txt -Xmx2g -Dfile.encoding=UTF-8 -Djava.io.tmpdir=/tmp -Duser.country=US -Duser.language=en -Duser.variant -ea worker.org.gradle.process.internal.worker.GradleWorkerMain 'Gradle Test Executor 4' Starting process 'Gradle Test Executor 5'. Working directory: /build/reproducible-path/igv-2.18.5+dfsg Command: /usr/lib/jvm/java-21-openjdk-amd64/bin/java -Ddebian.package=igv -Dfile.separator=/ -Dignore.ioexceptions=false -Dinclude.longrunning=false -Djava.awt.headless=true -Djava.class.path=/usr/share/gradle/lib/gradle-launcher-4.4.1.jar -Djava.class.version=65.0 -Djava.home=/usr/lib/jvm/java-21-openjdk-amd64 -Djava.library.path=/usr/java/packages/lib:/usr/lib/x86_64-linux-gnu/jni:/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu:/usr/lib/jni:/lib:/usr/lib -Djava.runtime.name=OpenJDK Runtime Environment -Djava.runtime.version=21.0.5+11-Debian-1 -Djava.specification.name=Java Platform API Specification -Djava.specification.vendor=Oracle Corporation -Djava.specification.version=21 -Djava.vendor=Debian -Djava.vendor.url=https://tracker.debian.org/openjdk-21 -Djava.vendor.url.bug=https://bugs.debian.org/openjdk-21 -Djava.version=21.0.5 -Djava.version.date=2024-10-15 -Djava.vm.compressedOopsMode=Zero based -Djava.vm.info=mixed mode, sharing -Djava.vm.name=OpenJDK 64-Bit Server VM -Djava.vm.specification.name=Java Virtual Machine Specification -Djava.vm.specification.vendor=Oracle Corporation -Djava.vm.specification.version=21 -Djava.vm.vendor=Debian -Djava.vm.version=21.0.5+11-Debian-1 -Djdk.debug=release -Dlibrary.jansi.path=/build/reproducible-path/igv-2.18.5+dfsg/.gradle/native/jansi/null/linux64 -Dline.separator= -Dmake.fail=false -Dnative.encoding=ANSI_X3.4-1968 -Dorg.gradle.appname=gradle -Dorg.gradle.jvmargs=-Xbootclasspath/a:/usr/share/java/gradle-helper-hook.jar:/usr/share/java/maven-repo-helper.jar -Dorg.gradle.native=false -Dos.arch=amd64 -Dos.name=Linux -Dos.version=6.11.5+bpo-amd64 -Dpath.separator=: -Dsamjdk.snappy.disable=true -Dstderr.encoding=ANSI_X3.4-1968 -Dstdout.encoding=ANSI_X3.4-1968 -Dsun.arch.data.model=64 -Dsun.boot.library.path=/usr/lib/jvm/java-21-openjdk-amd64/lib -Dsun.cpu.endian=little -Dsun.io.unicode.encoding=UnicodeLittle -Dsun.java.command=org.gradle.launcher.daemon.bootstrap.GradleDaemon 4.4.1 -Dsun.java.launcher=SUN_STANDARD -Dsun.jnu.encoding=ANSI_X3.4-1968 -Dsun.management.compiler=HotSpot 64-Bit Tiered Compilers -Duser.dir=/build/reproducible-path/igv-2.18.5+dfsg -Duser.home=. -Duser.name=debian -Duser.timezone=GMT-12:00 @/tmp/gradle-worker-classpath4071289979525411012txt -Xmx2g -Dfile.encoding=UTF-8 -Djava.io.tmpdir=/tmp -Duser.country=US -Duser.language=en -Duser.variant -ea worker.org.gradle.process.internal.worker.GradleWorkerMain 'Gradle Test Executor 5' Starting process 'Gradle Test Executor 3'. Working directory: /build/reproducible-path/igv-2.18.5+dfsg Command: /usr/lib/jvm/java-21-openjdk-amd64/bin/java -Ddebian.package=igv -Dfile.separator=/ -Dignore.ioexceptions=false -Dinclude.longrunning=false -Djava.awt.headless=true -Djava.class.path=/usr/share/gradle/lib/gradle-launcher-4.4.1.jar -Djava.class.version=65.0 -Djava.home=/usr/lib/jvm/java-21-openjdk-amd64 -Djava.library.path=/usr/java/packages/lib:/usr/lib/x86_64-linux-gnu/jni:/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu:/usr/lib/jni:/lib:/usr/lib -Djava.runtime.name=OpenJDK Runtime Environment -Djava.runtime.version=21.0.5+11-Debian-1 -Djava.specification.name=Java Platform API Specification -Djava.specification.vendor=Oracle Corporation -Djava.specification.version=21 -Djava.vendor=Debian -Djava.vendor.url=https://tracker.debian.org/openjdk-21 -Djava.vendor.url.bug=https://bugs.debian.org/openjdk-21 -Djava.version=21.0.5 -Djava.version.date=2024-10-15 -Djava.vm.compressedOopsMode=Zero based -Djava.vm.info=mixed mode, sharing -Djava.vm.name=OpenJDK 64-Bit Server VM -Djava.vm.specification.name=Java Virtual Machine Specification -Djava.vm.specification.vendor=Oracle Corporation -Djava.vm.specification.version=21 -Djava.vm.vendor=Debian -Djava.vm.version=21.0.5+11-Debian-1 -Djdk.debug=release -Dlibrary.jansi.path=/build/reproducible-path/igv-2.18.5+dfsg/.gradle/native/jansi/null/linux64 -Dline.separator= -Dmake.fail=false -Dnative.encoding=ANSI_X3.4-1968 -Dorg.gradle.appname=gradle -Dorg.gradle.jvmargs=-Xbootclasspath/a:/usr/share/java/gradle-helper-hook.jar:/usr/share/java/maven-repo-helper.jar -Dorg.gradle.native=false -Dos.arch=amd64 -Dos.name=Linux -Dos.version=6.11.5+bpo-amd64 -Dpath.separator=: -Dsamjdk.snappy.disable=true -Dstderr.encoding=ANSI_X3.4-1968 -Dstdout.encoding=ANSI_X3.4-1968 -Dsun.arch.data.model=64 -Dsun.boot.library.path=/usr/lib/jvm/java-21-openjdk-amd64/lib -Dsun.cpu.endian=little -Dsun.io.unicode.encoding=UnicodeLittle -Dsun.java.command=org.gradle.launcher.daemon.bootstrap.GradleDaemon 4.4.1 -Dsun.java.launcher=SUN_STANDARD -Dsun.jnu.encoding=ANSI_X3.4-1968 -Dsun.management.compiler=HotSpot 64-Bit Tiered Compilers -Duser.dir=/build/reproducible-path/igv-2.18.5+dfsg -Duser.home=. -Duser.name=debian -Duser.timezone=GMT-12:00 @/tmp/gradle-worker-classpath14395668700844518962txt -Xmx2g -Dfile.encoding=UTF-8 -Djava.io.tmpdir=/tmp -Duser.country=US -Duser.language=en -Duser.variant -ea worker.org.gradle.process.internal.worker.GradleWorkerMain 'Gradle Test Executor 3' Starting process 'Gradle Test Executor 8'. Working directory: /build/reproducible-path/igv-2.18.5+dfsg Command: /usr/lib/jvm/java-21-openjdk-amd64/bin/java -Ddebian.package=igv -Dfile.separator=/ -Dignore.ioexceptions=false -Dinclude.longrunning=false -Djava.awt.headless=true -Djava.class.path=/usr/share/gradle/lib/gradle-launcher-4.4.1.jar -Djava.class.version=65.0 -Djava.home=/usr/lib/jvm/java-21-openjdk-amd64 -Djava.library.path=/usr/java/packages/lib:/usr/lib/x86_64-linux-gnu/jni:/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu:/usr/lib/jni:/lib:/usr/lib -Djava.runtime.name=OpenJDK Runtime Environment -Djava.runtime.version=21.0.5+11-Debian-1 -Djava.specification.name=Java Platform API Specification -Djava.specification.vendor=Oracle Corporation -Djava.specification.version=21 -Djava.vendor=Debian -Djava.vendor.url=https://tracker.debian.org/openjdk-21 -Djava.vendor.url.bug=https://bugs.debian.org/openjdk-21 -Djava.version=21.0.5 -Djava.version.date=2024-10-15 -Djava.vm.compressedOopsMode=Zero based -Djava.vm.info=mixed mode, sharing -Djava.vm.name=OpenJDK 64-Bit Server VM -Djava.vm.specification.name=Java Virtual Machine Specification -Djava.vm.specification.vendor=Oracle Corporation -Djava.vm.specification.version=21 -Djava.vm.vendor=Debian -Djava.vm.version=21.0.5+11-Debian-1 -Djdk.debug=release -Dlibrary.jansi.path=/build/reproducible-path/igv-2.18.5+dfsg/.gradle/native/jansi/null/linux64 -Dline.separator= -Dmake.fail=false -Dnative.encoding=ANSI_X3.4-1968 -Dorg.gradle.appname=gradle -Dorg.gradle.jvmargs=-Xbootclasspath/a:/usr/share/java/gradle-helper-hook.jar:/usr/share/java/maven-repo-helper.jar -Dorg.gradle.native=false -Dos.arch=amd64 -Dos.name=Linux -Dos.version=6.11.5+bpo-amd64 -Dpath.separator=: -Dsamjdk.snappy.disable=true -Dstderr.encoding=ANSI_X3.4-1968 -Dstdout.encoding=ANSI_X3.4-1968 -Dsun.arch.data.model=64 -Dsun.boot.library.path=/usr/lib/jvm/java-21-openjdk-amd64/lib -Dsun.cpu.endian=little -Dsun.io.unicode.encoding=UnicodeLittle -Dsun.java.command=org.gradle.launcher.daemon.bootstrap.GradleDaemon 4.4.1 -Dsun.java.launcher=SUN_STANDARD -Dsun.jnu.encoding=ANSI_X3.4-1968 -Dsun.management.compiler=HotSpot 64-Bit Tiered Compilers -Duser.dir=/build/reproducible-path/igv-2.18.5+dfsg -Duser.home=. -Duser.name=debian -Duser.timezone=GMT-12:00 @/tmp/gradle-worker-classpath2675232758697431217txt -Xmx2g -Dfile.encoding=UTF-8 -Djava.io.tmpdir=/tmp -Duser.country=US -Duser.language=en -Duser.variant -ea worker.org.gradle.process.internal.worker.GradleWorkerMain 'Gradle Test Executor 8' Starting process 'Gradle Test Executor 9'. Working directory: /build/reproducible-path/igv-2.18.5+dfsg Command: /usr/lib/jvm/java-21-openjdk-amd64/bin/java -Ddebian.package=igv -Dfile.separator=/ -Dignore.ioexceptions=false -Dinclude.longrunning=false -Djava.awt.headless=true -Djava.class.path=/usr/share/gradle/lib/gradle-launcher-4.4.1.jar -Djava.class.version=65.0 -Djava.home=/usr/lib/jvm/java-21-openjdk-amd64 -Djava.library.path=/usr/java/packages/lib:/usr/lib/x86_64-linux-gnu/jni:/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu:/usr/lib/jni:/lib:/usr/lib -Djava.runtime.name=OpenJDK Runtime Environment -Djava.runtime.version=21.0.5+11-Debian-1 -Djava.specification.name=Java Platform API Specification -Djava.specification.vendor=Oracle Corporation -Djava.specification.version=21 -Djava.vendor=Debian -Djava.vendor.url=https://tracker.debian.org/openjdk-21 -Djava.vendor.url.bug=https://bugs.debian.org/openjdk-21 -Djava.version=21.0.5 -Djava.version.date=2024-10-15 -Djava.vm.compressedOopsMode=Zero based -Djava.vm.info=mixed mode, sharing -Djava.vm.name=OpenJDK 64-Bit Server VM -Djava.vm.specification.name=Java Virtual Machine Specification -Djava.vm.specification.vendor=Oracle Corporation -Djava.vm.specification.version=21 -Djava.vm.vendor=Debian -Djava.vm.version=21.0.5+11-Debian-1 -Djdk.debug=release -Dlibrary.jansi.path=/build/reproducible-path/igv-2.18.5+dfsg/.gradle/native/jansi/null/linux64 -Dline.separator= -Dmake.fail=false -Dnative.encoding=ANSI_X3.4-1968 -Dorg.gradle.appname=gradle -Dorg.gradle.jvmargs=-Xbootclasspath/a:/usr/share/java/gradle-helper-hook.jar:/usr/share/java/maven-repo-helper.jar -Dorg.gradle.native=false -Dos.arch=amd64 -Dos.name=Linux -Dos.version=6.11.5+bpo-amd64 -Dpath.separator=: -Dsamjdk.snappy.disable=true -Dstderr.encoding=ANSI_X3.4-1968 -Dstdout.encoding=ANSI_X3.4-1968 -Dsun.arch.data.model=64 -Dsun.boot.library.path=/usr/lib/jvm/java-21-openjdk-amd64/lib -Dsun.cpu.endian=little -Dsun.io.unicode.encoding=UnicodeLittle -Dsun.java.command=org.gradle.launcher.daemon.bootstrap.GradleDaemon 4.4.1 -Dsun.java.launcher=SUN_STANDARD -Dsun.jnu.encoding=ANSI_X3.4-1968 -Dsun.management.compiler=HotSpot 64-Bit Tiered Compilers -Duser.dir=/build/reproducible-path/igv-2.18.5+dfsg -Duser.home=. -Duser.name=debian -Duser.timezone=GMT-12:00 @/tmp/gradle-worker-classpath719692356247678249txt -Xmx2g -Dfile.encoding=UTF-8 -Djava.io.tmpdir=/tmp -Duser.country=US -Duser.language=en -Duser.variant -ea worker.org.gradle.process.internal.worker.GradleWorkerMain 'Gradle Test Executor 9' Starting process 'Gradle Test Executor 12'. Working directory: /build/reproducible-path/igv-2.18.5+dfsg Command: /usr/lib/jvm/java-21-openjdk-amd64/bin/java -Ddebian.package=igv -Dfile.separator=/ -Dignore.ioexceptions=false -Dinclude.longrunning=false -Djava.awt.headless=true -Djava.class.path=/usr/share/gradle/lib/gradle-launcher-4.4.1.jar -Djava.class.version=65.0 -Djava.home=/usr/lib/jvm/java-21-openjdk-amd64 -Djava.library.path=/usr/java/packages/lib:/usr/lib/x86_64-linux-gnu/jni:/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu:/usr/lib/jni:/lib:/usr/lib -Djava.runtime.name=OpenJDK Runtime Environment -Djava.runtime.version=21.0.5+11-Debian-1 -Djava.specification.name=Java Platform API Specification -Djava.specification.vendor=Oracle Corporation -Djava.specification.version=21 -Djava.vendor=Debian -Djava.vendor.url=https://tracker.debian.org/openjdk-21 -Djava.vendor.url.bug=https://bugs.debian.org/openjdk-21 -Djava.version=21.0.5 -Djava.version.date=2024-10-15 -Djava.vm.compressedOopsMode=Zero based -Djava.vm.info=mixed mode, sharing -Djava.vm.name=OpenJDK 64-Bit Server VM -Djava.vm.specification.name=Java Virtual Machine Specification -Djava.vm.specification.vendor=Oracle Corporation -Djava.vm.specification.version=21 -Djava.vm.vendor=Debian -Djava.vm.version=21.0.5+11-Debian-1 -Djdk.debug=release -Dlibrary.jansi.path=/build/reproducible-path/igv-2.18.5+dfsg/.gradle/native/jansi/null/linux64 -Dline.separator= -Dmake.fail=false -Dnative.encoding=ANSI_X3.4-1968 -Dorg.gradle.appname=gradle -Dorg.gradle.jvmargs=-Xbootclasspath/a:/usr/share/java/gradle-helper-hook.jar:/usr/share/java/maven-repo-helper.jar -Dorg.gradle.native=false -Dos.arch=amd64 -Dos.name=Linux -Dos.version=6.11.5+bpo-amd64 -Dpath.separator=: -Dsamjdk.snappy.disable=true -Dstderr.encoding=ANSI_X3.4-1968 -Dstdout.encoding=ANSI_X3.4-1968 -Dsun.arch.data.model=64 -Dsun.boot.library.path=/usr/lib/jvm/java-21-openjdk-amd64/lib -Dsun.cpu.endian=little -Dsun.io.unicode.encoding=UnicodeLittle -Dsun.java.command=org.gradle.launcher.daemon.bootstrap.GradleDaemon 4.4.1 -Dsun.java.launcher=SUN_STANDARD -Dsun.jnu.encoding=ANSI_X3.4-1968 -Dsun.management.compiler=HotSpot 64-Bit Tiered Compilers -Duser.dir=/build/reproducible-path/igv-2.18.5+dfsg -Duser.home=. -Duser.name=debian -Duser.timezone=GMT-12:00 @/tmp/gradle-worker-classpath3179331687133858617txt -Xmx2g -Dfile.encoding=UTF-8 -Djava.io.tmpdir=/tmp -Duser.country=US -Duser.language=en -Duser.variant -ea worker.org.gradle.process.internal.worker.GradleWorkerMain 'Gradle Test Executor 12' Starting process 'Gradle Test Executor 7'. Working directory: /build/reproducible-path/igv-2.18.5+dfsg Command: /usr/lib/jvm/java-21-openjdk-amd64/bin/java -Ddebian.package=igv -Dfile.separator=/ -Dignore.ioexceptions=false -Dinclude.longrunning=false -Djava.awt.headless=true -Djava.class.path=/usr/share/gradle/lib/gradle-launcher-4.4.1.jar -Djava.class.version=65.0 -Djava.home=/usr/lib/jvm/java-21-openjdk-amd64 -Djava.library.path=/usr/java/packages/lib:/usr/lib/x86_64-linux-gnu/jni:/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu:/usr/lib/jni:/lib:/usr/lib -Djava.runtime.name=OpenJDK Runtime Environment -Djava.runtime.version=21.0.5+11-Debian-1 -Djava.specification.name=Java Platform API Specification -Djava.specification.vendor=Oracle Corporation -Djava.specification.version=21 -Djava.vendor=Debian -Djava.vendor.url=https://tracker.debian.org/openjdk-21 -Djava.vendor.url.bug=https://bugs.debian.org/openjdk-21 -Djava.version=21.0.5 -Djava.version.date=2024-10-15 -Djava.vm.compressedOopsMode=Zero based -Djava.vm.info=mixed mode, sharing -Djava.vm.name=OpenJDK 64-Bit Server VM -Djava.vm.specification.name=Java Virtual Machine Specification -Djava.vm.specification.vendor=Oracle Corporation -Djava.vm.specification.version=21 -Djava.vm.vendor=Debian -Djava.vm.version=21.0.5+11-Debian-1 -Djdk.debug=release -Dlibrary.jansi.path=/build/reproducible-path/igv-2.18.5+dfsg/.gradle/native/jansi/null/linux64 -Dline.separator= -Dmake.fail=false -Dnative.encoding=ANSI_X3.4-1968 -Dorg.gradle.appname=gradle -Dorg.gradle.jvmargs=-Xbootclasspath/a:/usr/share/java/gradle-helper-hook.jar:/usr/share/java/maven-repo-helper.jar -Dorg.gradle.native=false -Dos.arch=amd64 -Dos.name=Linux -Dos.version=6.11.5+bpo-amd64 -Dpath.separator=: -Dsamjdk.snappy.disable=true -Dstderr.encoding=ANSI_X3.4-1968 -Dstdout.encoding=ANSI_X3.4-1968 -Dsun.arch.data.model=64 -Dsun.boot.library.path=/usr/lib/jvm/java-21-openjdk-amd64/lib -Dsun.cpu.endian=little -Dsun.io.unicode.encoding=UnicodeLittle -Dsun.java.command=org.gradle.launcher.daemon.bootstrap.GradleDaemon 4.4.1 -Dsun.java.launcher=SUN_STANDARD -Dsun.jnu.encoding=ANSI_X3.4-1968 -Dsun.management.compiler=HotSpot 64-Bit Tiered Compilers -Duser.dir=/build/reproducible-path/igv-2.18.5+dfsg -Duser.home=. -Duser.name=debian -Duser.timezone=GMT-12:00 @/tmp/gradle-worker-classpath12944135944578728697txt -Xmx2g -Dfile.encoding=UTF-8 -Djava.io.tmpdir=/tmp -Duser.country=US -Duser.language=en -Duser.variant -ea worker.org.gradle.process.internal.worker.GradleWorkerMain 'Gradle Test Executor 7' Starting process 'Gradle Test Executor 10'. Working directory: /build/reproducible-path/igv-2.18.5+dfsg Command: /usr/lib/jvm/java-21-openjdk-amd64/bin/java -Ddebian.package=igv -Dfile.separator=/ -Dignore.ioexceptions=false -Dinclude.longrunning=false -Djava.awt.headless=true -Djava.class.path=/usr/share/gradle/lib/gradle-launcher-4.4.1.jar -Djava.class.version=65.0 -Djava.home=/usr/lib/jvm/java-21-openjdk-amd64 -Djava.library.path=/usr/java/packages/lib:/usr/lib/x86_64-linux-gnu/jni:/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu:/usr/lib/jni:/lib:/usr/lib -Djava.runtime.name=OpenJDK Runtime Environment -Djava.runtime.version=21.0.5+11-Debian-1 -Djava.specification.name=Java Platform API Specification -Djava.specification.vendor=Oracle Corporation -Djava.specification.version=21 -Djava.vendor=Debian -Djava.vendor.url=https://tracker.debian.org/openjdk-21 -Djava.vendor.url.bug=https://bugs.debian.org/openjdk-21 -Djava.version=21.0.5 -Djava.version.date=2024-10-15 -Djava.vm.compressedOopsMode=Zero based -Djava.vm.info=mixed mode, sharing -Djava.vm.name=OpenJDK 64-Bit Server VM -Djava.vm.specification.name=Java Virtual Machine Specification -Djava.vm.specification.vendor=Oracle Corporation -Djava.vm.specification.version=21 -Djava.vm.vendor=Debian -Djava.vm.version=21.0.5+11-Debian-1 -Djdk.debug=release -Dlibrary.jansi.path=/build/reproducible-path/igv-2.18.5+dfsg/.gradle/native/jansi/null/linux64 -Dline.separator= -Dmake.fail=false -Dnative.encoding=ANSI_X3.4-1968 -Dorg.gradle.appname=gradle -Dorg.gradle.jvmargs=-Xbootclasspath/a:/usr/share/java/gradle-helper-hook.jar:/usr/share/java/maven-repo-helper.jar -Dorg.gradle.native=false -Dos.arch=amd64 -Dos.name=Linux -Dos.version=6.11.5+bpo-amd64 -Dpath.separator=: -Dsamjdk.snappy.disable=true -Dstderr.encoding=ANSI_X3.4-1968 -Dstdout.encoding=ANSI_X3.4-1968 -Dsun.arch.data.model=64 -Dsun.boot.library.path=/usr/lib/jvm/java-21-openjdk-amd64/lib -Dsun.cpu.endian=little -Dsun.io.unicode.encoding=UnicodeLittle -Dsun.java.command=org.gradle.launcher.daemon.bootstrap.GradleDaemon 4.4.1 -Dsun.java.launcher=SUN_STANDARD -Dsun.jnu.encoding=ANSI_X3.4-1968 -Dsun.management.compiler=HotSpot 64-Bit Tiered Compilers -Duser.dir=/build/reproducible-path/igv-2.18.5+dfsg -Duser.home=. -Duser.name=debian -Duser.timezone=GMT-12:00 @/tmp/gradle-worker-classpath2840186825996425314txt -Xmx2g -Dfile.encoding=UTF-8 -Djava.io.tmpdir=/tmp -Duser.country=US -Duser.language=en -Duser.variant -ea worker.org.gradle.process.internal.worker.GradleWorkerMain 'Gradle Test Executor 10' Starting process 'Gradle Test Executor 6'. Working directory: /build/reproducible-path/igv-2.18.5+dfsg Command: /usr/lib/jvm/java-21-openjdk-amd64/bin/java -Ddebian.package=igv -Dfile.separator=/ -Dignore.ioexceptions=false -Dinclude.longrunning=false -Djava.awt.headless=true -Djava.class.path=/usr/share/gradle/lib/gradle-launcher-4.4.1.jar -Djava.class.version=65.0 -Djava.home=/usr/lib/jvm/java-21-openjdk-amd64 -Djava.library.path=/usr/java/packages/lib:/usr/lib/x86_64-linux-gnu/jni:/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu:/usr/lib/jni:/lib:/usr/lib -Djava.runtime.name=OpenJDK Runtime Environment -Djava.runtime.version=21.0.5+11-Debian-1 -Djava.specification.name=Java Platform API Specification -Djava.specification.vendor=Oracle Corporation -Djava.specification.version=21 -Djava.vendor=Debian -Djava.vendor.url=https://tracker.debian.org/openjdk-21 -Djava.vendor.url.bug=https://bugs.debian.org/openjdk-21 -Djava.version=21.0.5 -Djava.version.date=2024-10-15 -Djava.vm.compressedOopsMode=Zero based -Djava.vm.info=mixed mode, sharing -Djava.vm.name=OpenJDK 64-Bit Server VM -Djava.vm.specification.name=Java Virtual Machine Specification -Djava.vm.specification.vendor=Oracle Corporation -Djava.vm.specification.version=21 -Djava.vm.vendor=Debian -Djava.vm.version=21.0.5+11-Debian-1 -Djdk.debug=release -Dlibrary.jansi.path=/build/reproducible-path/igv-2.18.5+dfsg/.gradle/native/jansi/null/linux64 -Dline.separator= -Dmake.fail=false -Dnative.encoding=ANSI_X3.4-1968 -Dorg.gradle.appname=gradle -Dorg.gradle.jvmargs=-Xbootclasspath/a:/usr/share/java/gradle-helper-hook.jar:/usr/share/java/maven-repo-helper.jar -Dorg.gradle.native=false -Dos.arch=amd64 -Dos.name=Linux -Dos.version=6.11.5+bpo-amd64 -Dpath.separator=: -Dsamjdk.snappy.disable=true -Dstderr.encoding=ANSI_X3.4-1968 -Dstdout.encoding=ANSI_X3.4-1968 -Dsun.arch.data.model=64 -Dsun.boot.library.path=/usr/lib/jvm/java-21-openjdk-amd64/lib -Dsun.cpu.endian=little -Dsun.io.unicode.encoding=UnicodeLittle -Dsun.java.command=org.gradle.launcher.daemon.bootstrap.GradleDaemon 4.4.1 -Dsun.java.launcher=SUN_STANDARD -Dsun.jnu.encoding=ANSI_X3.4-1968 -Dsun.management.compiler=HotSpot 64-Bit Tiered Compilers -Duser.dir=/build/reproducible-path/igv-2.18.5+dfsg -Duser.home=. -Duser.name=debian -Duser.timezone=GMT-12:00 @/tmp/gradle-worker-classpath9867686676298853189txt -Xmx2g -Dfile.encoding=UTF-8 -Djava.io.tmpdir=/tmp -Duser.country=US -Duser.language=en -Duser.variant -ea worker.org.gradle.process.internal.worker.GradleWorkerMain 'Gradle Test Executor 6' Starting process 'Gradle Test Executor 14'. Working directory: /build/reproducible-path/igv-2.18.5+dfsg Command: /usr/lib/jvm/java-21-openjdk-amd64/bin/java -Ddebian.package=igv -Dfile.separator=/ -Dignore.ioexceptions=false -Dinclude.longrunning=false -Djava.awt.headless=true -Djava.class.path=/usr/share/gradle/lib/gradle-launcher-4.4.1.jar -Djava.class.version=65.0 -Djava.home=/usr/lib/jvm/java-21-openjdk-amd64 -Djava.library.path=/usr/java/packages/lib:/usr/lib/x86_64-linux-gnu/jni:/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu:/usr/lib/jni:/lib:/usr/lib -Djava.runtime.name=OpenJDK Runtime Environment -Djava.runtime.version=21.0.5+11-Debian-1 -Djava.specification.name=Java Platform API Specification -Djava.specification.vendor=Oracle Corporation -Djava.specification.version=21 -Djava.vendor=Debian -Djava.vendor.url=https://tracker.debian.org/openjdk-21 -Djava.vendor.url.bug=https://bugs.debian.org/openjdk-21 -Djava.version=21.0.5 -Djava.version.date=2024-10-15 -Djava.vm.compressedOopsMode=Zero based -Djava.vm.info=mixed mode, sharing -Djava.vm.name=OpenJDK 64-Bit Server VM -Djava.vm.specification.name=Java Virtual Machine Specification -Djava.vm.specification.vendor=Oracle Corporation -Djava.vm.specification.version=21 -Djava.vm.vendor=Debian -Djava.vm.version=21.0.5+11-Debian-1 -Djdk.debug=release -Dlibrary.jansi.path=/build/reproducible-path/igv-2.18.5+dfsg/.gradle/native/jansi/null/linux64 -Dline.separator= -Dmake.fail=false -Dnative.encoding=ANSI_X3.4-1968 -Dorg.gradle.appname=gradle -Dorg.gradle.jvmargs=-Xbootclasspath/a:/usr/share/java/gradle-helper-hook.jar:/usr/share/java/maven-repo-helper.jar -Dorg.gradle.native=false -Dos.arch=amd64 -Dos.name=Linux -Dos.version=6.11.5+bpo-amd64 -Dpath.separator=: -Dsamjdk.snappy.disable=true -Dstderr.encoding=ANSI_X3.4-1968 -Dstdout.encoding=ANSI_X3.4-1968 -Dsun.arch.data.model=64 -Dsun.boot.library.path=/usr/lib/jvm/java-21-openjdk-amd64/lib -Dsun.cpu.endian=little -Dsun.io.unicode.encoding=UnicodeLittle -Dsun.java.command=org.gradle.launcher.daemon.bootstrap.GradleDaemon 4.4.1 -Dsun.java.launcher=SUN_STANDARD -Dsun.jnu.encoding=ANSI_X3.4-1968 -Dsun.management.compiler=HotSpot 64-Bit Tiered Compilers -Duser.dir=/build/reproducible-path/igv-2.18.5+dfsg -Duser.home=. -Duser.name=debian -Duser.timezone=GMT-12:00 @/tmp/gradle-worker-classpath1144682783755206388txt -Xmx2g -Dfile.encoding=UTF-8 -Djava.io.tmpdir=/tmp -Duser.country=US -Duser.language=en -Duser.variant -ea worker.org.gradle.process.internal.worker.GradleWorkerMain 'Gradle Test Executor 14' Starting process 'Gradle Test Executor 11'. Working directory: /build/reproducible-path/igv-2.18.5+dfsg Command: /usr/lib/jvm/java-21-openjdk-amd64/bin/java -Ddebian.package=igv -Dfile.separator=/ -Dignore.ioexceptions=false -Dinclude.longrunning=false -Djava.awt.headless=true -Djava.class.path=/usr/share/gradle/lib/gradle-launcher-4.4.1.jar -Djava.class.version=65.0 -Djava.home=/usr/lib/jvm/java-21-openjdk-amd64 -Djava.library.path=/usr/java/packages/lib:/usr/lib/x86_64-linux-gnu/jni:/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu:/usr/lib/jni:/lib:/usr/lib -Djava.runtime.name=OpenJDK Runtime Environment -Djava.runtime.version=21.0.5+11-Debian-1 -Djava.specification.name=Java Platform API Specification -Djava.specification.vendor=Oracle Corporation -Djava.specification.version=21 -Djava.vendor=Debian -Djava.vendor.url=https://tracker.debian.org/openjdk-21 -Djava.vendor.url.bug=https://bugs.debian.org/openjdk-21 -Djava.version=21.0.5 -Djava.version.date=2024-10-15 -Djava.vm.compressedOopsMode=Zero based -Djava.vm.info=mixed mode, sharing -Djava.vm.name=OpenJDK 64-Bit Server VM -Djava.vm.specification.name=Java Virtual Machine Specification -Djava.vm.specification.vendor=Oracle Corporation -Djava.vm.specification.version=21 -Djava.vm.vendor=Debian -Djava.vm.version=21.0.5+11-Debian-1 -Djdk.debug=release -Dlibrary.jansi.path=/build/reproducible-path/igv-2.18.5+dfsg/.gradle/native/jansi/null/linux64 -Dline.separator= -Dmake.fail=false -Dnative.encoding=ANSI_X3.4-1968 -Dorg.gradle.appname=gradle -Dorg.gradle.jvmargs=-Xbootclasspath/a:/usr/share/java/gradle-helper-hook.jar:/usr/share/java/maven-repo-helper.jar -Dorg.gradle.native=false -Dos.arch=amd64 -Dos.name=Linux -Dos.version=6.11.5+bpo-amd64 -Dpath.separator=: -Dsamjdk.snappy.disable=true -Dstderr.encoding=ANSI_X3.4-1968 -Dstdout.encoding=ANSI_X3.4-1968 -Dsun.arch.data.model=64 -Dsun.boot.library.path=/usr/lib/jvm/java-21-openjdk-amd64/lib -Dsun.cpu.endian=little -Dsun.io.unicode.encoding=UnicodeLittle -Dsun.java.command=org.gradle.launcher.daemon.bootstrap.GradleDaemon 4.4.1 -Dsun.java.launcher=SUN_STANDARD -Dsun.jnu.encoding=ANSI_X3.4-1968 -Dsun.management.compiler=HotSpot 64-Bit Tiered Compilers -Duser.dir=/build/reproducible-path/igv-2.18.5+dfsg -Duser.home=. -Duser.name=debian -Duser.timezone=GMT-12:00 @/tmp/gradle-worker-classpath18115406495074133696txt -Xmx2g -Dfile.encoding=UTF-8 -Djava.io.tmpdir=/tmp -Duser.country=US -Duser.language=en -Duser.variant -ea worker.org.gradle.process.internal.worker.GradleWorkerMain 'Gradle Test Executor 11' Starting process 'Gradle Test Executor 13'. Working directory: /build/reproducible-path/igv-2.18.5+dfsg Command: /usr/lib/jvm/java-21-openjdk-amd64/bin/java -Ddebian.package=igv -Dfile.separator=/ -Dignore.ioexceptions=false -Dinclude.longrunning=false -Djava.awt.headless=true -Djava.class.path=/usr/share/gradle/lib/gradle-launcher-4.4.1.jar -Djava.class.version=65.0 -Djava.home=/usr/lib/jvm/java-21-openjdk-amd64 -Djava.library.path=/usr/java/packages/lib:/usr/lib/x86_64-linux-gnu/jni:/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu:/usr/lib/jni:/lib:/usr/lib -Djava.runtime.name=OpenJDK Runtime Environment -Djava.runtime.version=21.0.5+11-Debian-1 -Djava.specification.name=Java Platform API Specification -Djava.specification.vendor=Oracle Corporation -Djava.specification.version=21 -Djava.vendor=Debian -Djava.vendor.url=https://tracker.debian.org/openjdk-21 -Djava.vendor.url.bug=https://bugs.debian.org/openjdk-21 -Djava.version=21.0.5 -Djava.version.date=2024-10-15 -Djava.vm.compressedOopsMode=Zero based -Djava.vm.info=mixed mode, sharing -Djava.vm.name=OpenJDK 64-Bit Server VM -Djava.vm.specification.name=Java Virtual Machine Specification -Djava.vm.specification.vendor=Oracle Corporation -Djava.vm.specification.version=21 -Djava.vm.vendor=Debian -Djava.vm.version=21.0.5+11-Debian-1 -Djdk.debug=release -Dlibrary.jansi.path=/build/reproducible-path/igv-2.18.5+dfsg/.gradle/native/jansi/null/linux64 -Dline.separator= -Dmake.fail=false -Dnative.encoding=ANSI_X3.4-1968 -Dorg.gradle.appname=gradle -Dorg.gradle.jvmargs=-Xbootclasspath/a:/usr/share/java/gradle-helper-hook.jar:/usr/share/java/maven-repo-helper.jar -Dorg.gradle.native=false -Dos.arch=amd64 -Dos.name=Linux -Dos.version=6.11.5+bpo-amd64 -Dpath.separator=: -Dsamjdk.snappy.disable=true -Dstderr.encoding=ANSI_X3.4-1968 -Dstdout.encoding=ANSI_X3.4-1968 -Dsun.arch.data.model=64 -Dsun.boot.library.path=/usr/lib/jvm/java-21-openjdk-amd64/lib -Dsun.cpu.endian=little -Dsun.io.unicode.encoding=UnicodeLittle -Dsun.java.command=org.gradle.launcher.daemon.bootstrap.GradleDaemon 4.4.1 -Dsun.java.launcher=SUN_STANDARD -Dsun.jnu.encoding=ANSI_X3.4-1968 -Dsun.management.compiler=HotSpot 64-Bit Tiered Compilers -Duser.dir=/build/reproducible-path/igv-2.18.5+dfsg -Duser.home=. -Duser.name=debian -Duser.timezone=GMT-12:00 @/tmp/gradle-worker-classpath7921431874119267834txt -Xmx2g -Dfile.encoding=UTF-8 -Djava.io.tmpdir=/tmp -Duser.country=US -Duser.language=en -Duser.variant -ea worker.org.gradle.process.internal.worker.GradleWorkerMain 'Gradle Test Executor 13' Successfully started process 'Gradle Test Executor 4' Successfully started process 'Gradle Test Executor 10' Successfully started process 'Gradle Test Executor 7' Successfully started process 'Gradle Test Executor 12' Successfully started process 'Gradle Test Executor 9' Successfully started process 'Gradle Test Executor 8' Successfully started process 'Gradle Test Executor 3' Successfully started process 'Gradle Test Executor 5' Successfully started process 'Gradle Test Executor 13' Successfully started process 'Gradle Test Executor 6' Successfully started process 'Gradle Test Executor 14' Successfully started process 'Gradle Test Executor 11' Starting process 'Gradle Test Executor 16'. Working directory: /build/reproducible-path/igv-2.18.5+dfsg Command: /usr/lib/jvm/java-21-openjdk-amd64/bin/java -Ddebian.package=igv -Dfile.separator=/ -Dignore.ioexceptions=false -Dinclude.longrunning=false -Djava.awt.headless=true -Djava.class.path=/usr/share/gradle/lib/gradle-launcher-4.4.1.jar -Djava.class.version=65.0 -Djava.home=/usr/lib/jvm/java-21-openjdk-amd64 -Djava.library.path=/usr/java/packages/lib:/usr/lib/x86_64-linux-gnu/jni:/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu:/usr/lib/jni:/lib:/usr/lib -Djava.runtime.name=OpenJDK Runtime Environment -Djava.runtime.version=21.0.5+11-Debian-1 -Djava.specification.name=Java Platform API Specification -Djava.specification.vendor=Oracle Corporation -Djava.specification.version=21 -Djava.vendor=Debian -Djava.vendor.url=https://tracker.debian.org/openjdk-21 -Djava.vendor.url.bug=https://bugs.debian.org/openjdk-21 -Djava.version=21.0.5 -Djava.version.date=2024-10-15 -Djava.vm.compressedOopsMode=Zero based -Djava.vm.info=mixed mode, sharing -Djava.vm.name=OpenJDK 64-Bit Server VM -Djava.vm.specification.name=Java Virtual Machine Specification -Djava.vm.specification.vendor=Oracle Corporation -Djava.vm.specification.version=21 -Djava.vm.vendor=Debian -Djava.vm.version=21.0.5+11-Debian-1 -Djdk.debug=release -Dlibrary.jansi.path=/build/reproducible-path/igv-2.18.5+dfsg/.gradle/native/jansi/null/linux64 -Dline.separator= -Dmake.fail=false -Dnative.encoding=ANSI_X3.4-1968 -Dorg.gradle.appname=gradle -Dorg.gradle.jvmargs=-Xbootclasspath/a:/usr/share/java/gradle-helper-hook.jar:/usr/share/java/maven-repo-helper.jar -Dorg.gradle.native=false -Dos.arch=amd64 -Dos.name=Linux -Dos.version=6.11.5+bpo-amd64 -Dpath.separator=: -Dsamjdk.snappy.disable=true -Dstderr.encoding=ANSI_X3.4-1968 -Dstdout.encoding=ANSI_X3.4-1968 -Dsun.arch.data.model=64 -Dsun.boot.library.path=/usr/lib/jvm/java-21-openjdk-amd64/lib -Dsun.cpu.endian=little -Dsun.io.unicode.encoding=UnicodeLittle -Dsun.java.command=org.gradle.launcher.daemon.bootstrap.GradleDaemon 4.4.1 -Dsun.java.launcher=SUN_STANDARD -Dsun.jnu.encoding=ANSI_X3.4-1968 -Dsun.management.compiler=HotSpot 64-Bit Tiered Compilers -Duser.dir=/build/reproducible-path/igv-2.18.5+dfsg -Duser.home=. -Duser.name=debian -Duser.timezone=GMT-12:00 @/tmp/gradle-worker-classpath15436814327507375277txt -Xmx2g -Dfile.encoding=UTF-8 -Djava.io.tmpdir=/tmp -Duser.country=US -Duser.language=en -Duser.variant -ea worker.org.gradle.process.internal.worker.GradleWorkerMain 'Gradle Test Executor 16' Starting process 'Gradle Test Executor 20'. Working directory: /build/reproducible-path/igv-2.18.5+dfsg Command: /usr/lib/jvm/java-21-openjdk-amd64/bin/java -Ddebian.package=igv -Dfile.separator=/ -Dignore.ioexceptions=false -Dinclude.longrunning=false -Djava.awt.headless=true -Djava.class.path=/usr/share/gradle/lib/gradle-launcher-4.4.1.jar -Djava.class.version=65.0 -Djava.home=/usr/lib/jvm/java-21-openjdk-amd64 -Djava.library.path=/usr/java/packages/lib:/usr/lib/x86_64-linux-gnu/jni:/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu:/usr/lib/jni:/lib:/usr/lib -Djava.runtime.name=OpenJDK Runtime Environment -Djava.runtime.version=21.0.5+11-Debian-1 -Djava.specification.name=Java Platform API Specification -Djava.specification.vendor=Oracle Corporation -Djava.specification.version=21 -Djava.vendor=Debian -Djava.vendor.url=https://tracker.debian.org/openjdk-21 -Djava.vendor.url.bug=https://bugs.debian.org/openjdk-21 -Djava.version=21.0.5 -Djava.version.date=2024-10-15 -Djava.vm.compressedOopsMode=Zero based -Djava.vm.info=mixed mode, sharing -Djava.vm.name=OpenJDK 64-Bit Server VM -Djava.vm.specification.name=Java Virtual Machine Specification -Djava.vm.specification.vendor=Oracle Corporation -Djava.vm.specification.version=21 -Djava.vm.vendor=Debian -Djava.vm.version=21.0.5+11-Debian-1 -Djdk.debug=release -Dlibrary.jansi.path=/build/reproducible-path/igv-2.18.5+dfsg/.gradle/native/jansi/null/linux64 -Dline.separator= -Dmake.fail=false -Dnative.encoding=ANSI_X3.4-1968 -Dorg.gradle.appname=gradle -Dorg.gradle.jvmargs=-Xbootclasspath/a:/usr/share/java/gradle-helper-hook.jar:/usr/share/java/maven-repo-helper.jar -Dorg.gradle.native=false -Dos.arch=amd64 -Dos.name=Linux -Dos.version=6.11.5+bpo-amd64 -Dpath.separator=: -Dsamjdk.snappy.disable=true -Dstderr.encoding=ANSI_X3.4-1968 -Dstdout.encoding=ANSI_X3.4-1968 -Dsun.arch.data.model=64 -Dsun.boot.library.path=/usr/lib/jvm/java-21-openjdk-amd64/lib -Dsun.cpu.endian=little -Dsun.io.unicode.encoding=UnicodeLittle -Dsun.java.command=org.gradle.launcher.daemon.bootstrap.GradleDaemon 4.4.1 -Dsun.java.launcher=SUN_STANDARD -Dsun.jnu.encoding=ANSI_X3.4-1968 -Dsun.management.compiler=HotSpot 64-Bit Tiered Compilers -Duser.dir=/build/reproducible-path/igv-2.18.5+dfsg -Duser.home=. -Duser.name=debian -Duser.timezone=GMT-12:00 @/tmp/gradle-worker-classpath12829576186663542348txt -Xmx2g -Dfile.encoding=UTF-8 -Djava.io.tmpdir=/tmp -Duser.country=US -Duser.language=en -Duser.variant -ea worker.org.gradle.process.internal.worker.GradleWorkerMain 'Gradle Test Executor 20' Starting process 'Gradle Test Executor 18'. Working directory: /build/reproducible-path/igv-2.18.5+dfsg Command: /usr/lib/jvm/java-21-openjdk-amd64/bin/java -Ddebian.package=igv -Dfile.separator=/ -Dignore.ioexceptions=false -Dinclude.longrunning=false -Djava.awt.headless=true -Djava.class.path=/usr/share/gradle/lib/gradle-launcher-4.4.1.jar -Djava.class.version=65.0 -Djava.home=/usr/lib/jvm/java-21-openjdk-amd64 -Djava.library.path=/usr/java/packages/lib:/usr/lib/x86_64-linux-gnu/jni:/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu:/usr/lib/jni:/lib:/usr/lib -Djava.runtime.name=OpenJDK Runtime Environment -Djava.runtime.version=21.0.5+11-Debian-1 -Djava.specification.name=Java Platform API Specification -Djava.specification.vendor=Oracle Corporation -Djava.specification.version=21 -Djava.vendor=Debian -Djava.vendor.url=https://tracker.debian.org/openjdk-21 -Djava.vendor.url.bug=https://bugs.debian.org/openjdk-21 -Djava.version=21.0.5 -Djava.version.date=2024-10-15 -Djava.vm.compressedOopsMode=Zero based -Djava.vm.info=mixed mode, sharing -Djava.vm.name=OpenJDK 64-Bit Server VM -Djava.vm.specification.name=Java Virtual Machine Specification -Djava.vm.specification.vendor=Oracle Corporation -Djava.vm.specification.version=21 -Djava.vm.vendor=Debian -Djava.vm.version=21.0.5+11-Debian-1 -Djdk.debug=release -Dlibrary.jansi.path=/build/reproducible-path/igv-2.18.5+dfsg/.gradle/native/jansi/null/linux64 -Dline.separator= -Dmake.fail=false -Dnative.encoding=ANSI_X3.4-1968 -Dorg.gradle.appname=gradle -Dorg.gradle.jvmargs=-Xbootclasspath/a:/usr/share/java/gradle-helper-hook.jar:/usr/share/java/maven-repo-helper.jar -Dorg.gradle.native=false -Dos.arch=amd64 -Dos.name=Linux -Dos.version=6.11.5+bpo-amd64 -Dpath.separator=: -Dsamjdk.snappy.disable=true -Dstderr.encoding=ANSI_X3.4-1968 -Dstdout.encoding=ANSI_X3.4-1968 -Dsun.arch.data.model=64 -Dsun.boot.library.path=/usr/lib/jvm/java-21-openjdk-amd64/lib -Dsun.cpu.endian=little -Dsun.io.unicode.encoding=UnicodeLittle -Dsun.java.command=org.gradle.launcher.daemon.bootstrap.GradleDaemon 4.4.1 -Dsun.java.launcher=SUN_STANDARD -Dsun.jnu.encoding=ANSI_X3.4-1968 -Dsun.management.compiler=HotSpot 64-Bit Tiered Compilers -Duser.dir=/build/reproducible-path/igv-2.18.5+dfsg -Duser.home=. -Duser.name=debian -Duser.timezone=GMT-12:00 @/tmp/gradle-worker-classpath10786242521930996024txt -Xmx2g -Dfile.encoding=UTF-8 -Djava.io.tmpdir=/tmp -Duser.country=US -Duser.language=en -Duser.variant -ea worker.org.gradle.process.internal.worker.GradleWorkerMain 'Gradle Test Executor 18' Starting process 'Gradle Test Executor 17'. Working directory: /build/reproducible-path/igv-2.18.5+dfsg Command: /usr/lib/jvm/java-21-openjdk-amd64/bin/java -Ddebian.package=igv -Dfile.separator=/ -Dignore.ioexceptions=false -Dinclude.longrunning=false -Djava.awt.headless=true -Djava.class.path=/usr/share/gradle/lib/gradle-launcher-4.4.1.jar -Djava.class.version=65.0 -Djava.home=/usr/lib/jvm/java-21-openjdk-amd64 -Djava.library.path=/usr/java/packages/lib:/usr/lib/x86_64-linux-gnu/jni:/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu:/usr/lib/jni:/lib:/usr/lib -Djava.runtime.name=OpenJDK Runtime Environment -Djava.runtime.version=21.0.5+11-Debian-1 -Djava.specification.name=Java Platform API Specification -Djava.specification.vendor=Oracle Corporation -Djava.specification.version=21 -Djava.vendor=Debian -Djava.vendor.url=https://tracker.debian.org/openjdk-21 -Djava.vendor.url.bug=https://bugs.debian.org/openjdk-21 -Djava.version=21.0.5 -Djava.version.date=2024-10-15 -Djava.vm.compressedOopsMode=Zero based -Djava.vm.info=mixed mode, sharing -Djava.vm.name=OpenJDK 64-Bit Server VM -Djava.vm.specification.name=Java Virtual Machine Specification -Djava.vm.specification.vendor=Oracle Corporation -Djava.vm.specification.version=21 -Djava.vm.vendor=Debian -Djava.vm.version=21.0.5+11-Debian-1 -Djdk.debug=release -Dlibrary.jansi.path=/build/reproducible-path/igv-2.18.5+dfsg/.gradle/native/jansi/null/linux64 -Dline.separator= -Dmake.fail=false -Dnative.encoding=ANSI_X3.4-1968 -Dorg.gradle.appname=gradle -Dorg.gradle.jvmargs=-Xbootclasspath/a:/usr/share/java/gradle-helper-hook.jar:/usr/share/java/maven-repo-helper.jar -Dorg.gradle.native=false -Dos.arch=amd64 -Dos.name=Linux -Dos.version=6.11.5+bpo-amd64 -Dpath.separator=: -Dsamjdk.snappy.disable=true -Dstderr.encoding=ANSI_X3.4-1968 -Dstdout.encoding=ANSI_X3.4-1968 -Dsun.arch.data.model=64 -Dsun.boot.library.path=/usr/lib/jvm/java-21-openjdk-amd64/lib -Dsun.cpu.endian=little -Dsun.io.unicode.encoding=UnicodeLittle -Dsun.java.command=org.gradle.launcher.daemon.bootstrap.GradleDaemon 4.4.1 -Dsun.java.launcher=SUN_STANDARD -Dsun.jnu.encoding=ANSI_X3.4-1968 -Dsun.management.compiler=HotSpot 64-Bit Tiered Compilers -Duser.dir=/build/reproducible-path/igv-2.18.5+dfsg -Duser.home=. -Duser.name=debian -Duser.timezone=GMT-12:00 @/tmp/gradle-worker-classpath6078769519347829485txt -Xmx2g -Dfile.encoding=UTF-8 -Djava.io.tmpdir=/tmp -Duser.country=US -Duser.language=en -Duser.variant -ea worker.org.gradle.process.internal.worker.GradleWorkerMain 'Gradle Test Executor 17' Starting process 'Gradle Test Executor 21'. Working directory: /build/reproducible-path/igv-2.18.5+dfsg Command: /usr/lib/jvm/java-21-openjdk-amd64/bin/java -Ddebian.package=igv -Dfile.separator=/ -Dignore.ioexceptions=false -Dinclude.longrunning=false -Djava.awt.headless=true -Djava.class.path=/usr/share/gradle/lib/gradle-launcher-4.4.1.jar -Djava.class.version=65.0 -Djava.home=/usr/lib/jvm/java-21-openjdk-amd64 -Djava.library.path=/usr/java/packages/lib:/usr/lib/x86_64-linux-gnu/jni:/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu:/usr/lib/jni:/lib:/usr/lib -Djava.runtime.name=OpenJDK Runtime Environment -Djava.runtime.version=21.0.5+11-Debian-1 -Djava.specification.name=Java Platform API Specification -Djava.specification.vendor=Oracle Corporation -Djava.specification.version=21 -Djava.vendor=Debian -Djava.vendor.url=https://tracker.debian.org/openjdk-21 -Djava.vendor.url.bug=https://bugs.debian.org/openjdk-21 -Djava.version=21.0.5 -Djava.version.date=2024-10-15 -Djava.vm.compressedOopsMode=Zero based -Djava.vm.info=mixed mode, sharing -Djava.vm.name=OpenJDK 64-Bit Server VM -Djava.vm.specification.name=Java Virtual Machine Specification -Djava.vm.specification.vendor=Oracle Corporation -Djava.vm.specification.version=21 -Djava.vm.vendor=Debian -Djava.vm.version=21.0.5+11-Debian-1 -Djdk.debug=release -Dlibrary.jansi.path=/build/reproducible-path/igv-2.18.5+dfsg/.gradle/native/jansi/null/linux64 -Dline.separator= -Dmake.fail=false -Dnative.encoding=ANSI_X3.4-1968 -Dorg.gradle.appname=gradle -Dorg.gradle.jvmargs=-Xbootclasspath/a:/usr/share/java/gradle-helper-hook.jar:/usr/share/java/maven-repo-helper.jar -Dorg.gradle.native=false -Dos.arch=amd64 -Dos.name=Linux -Dos.version=6.11.5+bpo-amd64 -Dpath.separator=: -Dsamjdk.snappy.disable=true -Dstderr.encoding=ANSI_X3.4-1968 -Dstdout.encoding=ANSI_X3.4-1968 -Dsun.arch.data.model=64 -Dsun.boot.library.path=/usr/lib/jvm/java-21-openjdk-amd64/lib -Dsun.cpu.endian=little -Dsun.io.unicode.encoding=UnicodeLittle -Dsun.java.command=org.gradle.launcher.daemon.bootstrap.GradleDaemon 4.4.1 -Dsun.java.launcher=SUN_STANDARD -Dsun.jnu.encoding=ANSI_X3.4-1968 -Dsun.management.compiler=HotSpot 64-Bit Tiered Compilers -Duser.dir=/build/reproducible-path/igv-2.18.5+dfsg -Duser.home=. -Duser.name=debian -Duser.timezone=GMT-12:00 @/tmp/gradle-worker-classpath221821307460767407txt -Xmx2g -Dfile.encoding=UTF-8 -Djava.io.tmpdir=/tmp -Duser.country=US -Duser.language=en -Duser.variant -ea worker.org.gradle.process.internal.worker.GradleWorkerMain 'Gradle Test Executor 21' Starting process 'Gradle Test Executor 15'. Working directory: /build/reproducible-path/igv-2.18.5+dfsg Command: /usr/lib/jvm/java-21-openjdk-amd64/bin/java -Ddebian.package=igv -Dfile.separator=/ -Dignore.ioexceptions=false -Dinclude.longrunning=false -Djava.awt.headless=true -Djava.class.path=/usr/share/gradle/lib/gradle-launcher-4.4.1.jar -Djava.class.version=65.0 -Djava.home=/usr/lib/jvm/java-21-openjdk-amd64 -Djava.library.path=/usr/java/packages/lib:/usr/lib/x86_64-linux-gnu/jni:/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu:/usr/lib/jni:/lib:/usr/lib -Djava.runtime.name=OpenJDK Runtime Environment -Djava.runtime.version=21.0.5+11-Debian-1 -Djava.specification.name=Java Platform API Specification -Djava.specification.vendor=Oracle Corporation -Djava.specification.version=21 -Djava.vendor=Debian -Djava.vendor.url=https://tracker.debian.org/openjdk-21 -Djava.vendor.url.bug=https://bugs.debian.org/openjdk-21 -Djava.version=21.0.5 -Djava.version.date=2024-10-15 -Djava.vm.compressedOopsMode=Zero based -Djava.vm.info=mixed mode, sharing -Djava.vm.name=OpenJDK 64-Bit Server VM -Djava.vm.specification.name=Java Virtual Machine Specification -Djava.vm.specification.vendor=Oracle Corporation -Djava.vm.specification.version=21 -Djava.vm.vendor=Debian -Djava.vm.version=21.0.5+11-Debian-1 -Djdk.debug=release -Dlibrary.jansi.path=/build/reproducible-path/igv-2.18.5+dfsg/.gradle/native/jansi/null/linux64 -Dline.separator= -Dmake.fail=false -Dnative.encoding=ANSI_X3.4-1968 -Dorg.gradle.appname=gradle -Dorg.gradle.jvmargs=-Xbootclasspath/a:/usr/share/java/gradle-helper-hook.jar:/usr/share/java/maven-repo-helper.jar -Dorg.gradle.native=false -Dos.arch=amd64 -Dos.name=Linux -Dos.version=6.11.5+bpo-amd64 -Dpath.separator=: -Dsamjdk.snappy.disable=true -Dstderr.encoding=ANSI_X3.4-1968 -Dstdout.encoding=ANSI_X3.4-1968 -Dsun.arch.data.model=64 -Dsun.boot.library.path=/usr/lib/jvm/java-21-openjdk-amd64/lib -Dsun.cpu.endian=little -Dsun.io.unicode.encoding=UnicodeLittle -Dsun.java.command=org.gradle.launcher.daemon.bootstrap.GradleDaemon 4.4.1 -Dsun.java.launcher=SUN_STANDARD -Dsun.jnu.encoding=ANSI_X3.4-1968 -Dsun.management.compiler=HotSpot 64-Bit Tiered Compilers -Duser.dir=/build/reproducible-path/igv-2.18.5+dfsg -Duser.home=. -Duser.name=debian -Duser.timezone=GMT-12:00 @/tmp/gradle-worker-classpath15658772925383386783txt -Xmx2g -Dfile.encoding=UTF-8 -Djava.io.tmpdir=/tmp -Duser.country=US -Duser.language=en -Duser.variant -ea worker.org.gradle.process.internal.worker.GradleWorkerMain 'Gradle Test Executor 15' Starting process 'Gradle Test Executor 19'. Working directory: /build/reproducible-path/igv-2.18.5+dfsg Command: /usr/lib/jvm/java-21-openjdk-amd64/bin/java -Ddebian.package=igv -Dfile.separator=/ -Dignore.ioexceptions=false -Dinclude.longrunning=false -Djava.awt.headless=true -Djava.class.path=/usr/share/gradle/lib/gradle-launcher-4.4.1.jar -Djava.class.version=65.0 -Djava.home=/usr/lib/jvm/java-21-openjdk-amd64 -Djava.library.path=/usr/java/packages/lib:/usr/lib/x86_64-linux-gnu/jni:/lib/x86_64-linux-gnu:/usr/lib/x86_64-linux-gnu:/usr/lib/jni:/lib:/usr/lib -Djava.runtime.name=OpenJDK Runtime Environment -Djava.runtime.version=21.0.5+11-Debian-1 -Djava.specification.name=Java Platform API Specification -Djava.specification.vendor=Oracle Corporation -Djava.specification.version=21 -Djava.vendor=Debian -Djava.vendor.url=https://tracker.debian.org/openjdk-21 -Djava.vendor.url.bug=https://bugs.debian.org/openjdk-21 -Djava.version=21.0.5 -Djava.version.date=2024-10-15 -Djava.vm.compressedOopsMode=Zero based -Djava.vm.info=mixed mode, sharing -Djava.vm.name=OpenJDK 64-Bit Server VM -Djava.vm.specification.name=Java Virtual Machine Specification -Djava.vm.specification.vendor=Oracle Corporation -Djava.vm.specification.version=21 -Djava.vm.vendor=Debian -Djava.vm.version=21.0.5+11-Debian-1 -Djdk.debug=release -Dlibrary.jansi.path=/build/reproducible-path/igv-2.18.5+dfsg/.gradle/native/jansi/null/linux64 -Dline.separator= -Dmake.fail=false -Dnative.encoding=ANSI_X3.4-1968 -Dorg.gradle.appname=gradle -Dorg.gradle.jvmargs=-Xbootclasspath/a:/usr/share/java/gradle-helper-hook.jar:/usr/share/java/maven-repo-helper.jar -Dorg.gradle.native=false -Dos.arch=amd64 -Dos.name=Linux -Dos.version=6.11.5+bpo-amd64 -Dpath.separator=: -Dsamjdk.snappy.disable=true -Dstderr.encoding=ANSI_X3.4-1968 -Dstdout.encoding=ANSI_X3.4-1968 -Dsun.arch.data.model=64 -Dsun.boot.library.path=/usr/lib/jvm/java-21-openjdk-amd64/lib -Dsun.cpu.endian=little -Dsun.io.unicode.encoding=UnicodeLittle -Dsun.java.command=org.gradle.launcher.daemon.bootstrap.GradleDaemon 4.4.1 -Dsun.java.launcher=SUN_STANDARD -Dsun.jnu.encoding=ANSI_X3.4-1968 -Dsun.management.compiler=HotSpot 64-Bit Tiered Compilers -Duser.dir=/build/reproducible-path/igv-2.18.5+dfsg -Duser.home=. -Duser.name=debian -Duser.timezone=GMT-12:00 @/tmp/gradle-worker-classpath4716021086317263543txt -Xmx2g -Dfile.encoding=UTF-8 -Djava.io.tmpdir=/tmp -Duser.country=US -Duser.language=en -Duser.variant -ea worker.org.gradle.process.internal.worker.GradleWorkerMain 'Gradle Test Executor 19' Successfully started process 'Gradle Test Executor 16' Successfully started process 'Gradle Test Executor 19' Successfully started process 'Gradle Test Executor 15' Successfully started process 'Gradle Test Executor 20' Successfully started process 'Gradle Test Executor 17' Successfully started process 'Gradle Test Executor 18' Successfully started process 'Gradle Test Executor 21' org.broad.igv.batch.CommandExecutorTest STANDARD_OUT Gradle Test Executor 2 started executing tests. Gradle Test Executor 6 started executing tests. Gradle Test Executor 5 started executing tests. Gradle Test Executor 12 started executing tests. Gradle Test Executor 10 started executing tests. Gradle Test Executor 8 started executing tests. Gradle Test Executor 1 finished executing tests. You are trying to start a GUI in a headless environment. Aborting test org.broad.igv.ucsc.bb.BBDataSourceTest > testBigWigZoom SKIPPED org.broad.igv.ucsc.bb.BBDataSourceTest > testBigWigWig SKIPPED org.broad.igv.ucsc.bb.BBDataSourceTest > testUncompressedBigwig SKIPPED org.broad.igv.tdf.TDFReaderTest > testReader SKIPPED org.broad.igv.feature.genome.load.JsonGenomeLoaderTest > loadGenome SKIPPED org.broad.igv.util.blat.BlatClientTest > blatPOST SKIPPED org.broad.igv.util.blat.BlatClientTest > blatGET SKIPPED org.broad.igv.util.blat.BlatClientTest > blatTooShort SKIPPED org.broad.igv.util.collections.DoubleArrayListTest > test STANDARD_OUT IntArrayList time: 3 org.broad.igv.util.ArrayMemoryTest > compareMemory SKIPPED Gradle Test Executor 11 started executing tests. org.broad.igv.sam.mods.BaseModificationsTest > testOrientBotFwd STANDARD_OUT 115 -115 -90 -64 Gradle Test Executor 7 started executing tests. Gradle Test Executor 10 finished executing tests. Gradle Test Executor 14 started executing tests. Gradle Test Executor 3 started executing tests. org.broad.igv.ucsc.twobit.TwoBitSequenceTest > readSequenceRemote SKIPPED org.broad.igv.util.collections.IntArrayListTest > test STANDARD_OUT IntArrayList time: 102 Gradle Test Executor 13 started executing tests. Gradle Test Executor 9 started executing tests. Gradle Test Executor 4 started executing tests. org.broad.igv.tools.converters.GFFtoBedTest > testConvert STANDARD_ERROR Dec 22, 2025 7:36:31 PM java.util.prefs.FileSystemPreferences$1 run INFO: Created user preferences directory. Gradle Test Executor 12 finished executing tests. org.broad.igv.util.blat.LegacyBlatClientTest > fixWebBlat SKIPPED org.broad.igv.util.blat.LegacyBlatClientTest > parseUCSCResult SKIPPED org.broad.igv.util.blat.LegacyBlatClientTest > parseCustomResult SKIPPED org.broad.igv.util.IGVHttpClientUtilsTest > testExists SKIPPED org.broad.igv.util.IGVHttpClientUtilsTest > testGetContentLength SKIPPED Gradle Test Executor 16 started executing tests. org.broad.igv.tools.motiffinder.MotifFinderDialogHeadedTest STANDARD_OUT You are trying to start a GUI in a headless environment. Aborting test org.broad.igv.util.FileUtilsTest > testFindRelativeHttpPath STANDARD_OUT dir/test.txt Gradle Test Executor 6 finished executing tests. Gradle Test Executor 9 finished executing tests. Gradle Test Executor 20 started executing tests. Gradle Test Executor 5 finished executing tests. Gradle Test Executor 17 started executing tests. Gradle Test Executor 21 started executing tests. Gradle Test Executor 19 started executing tests. Gradle Test Executor 18 started executing tests. Gradle Test Executor 15 started executing tests. org.broad.igv.sam.mods.BaseModificationsTest > testHiFINegativeAlignment STANDARD_OUT 0 0 0 1 1 1 2 2 2 3 3 3 4 4 4 5 5 5 6 6 6 7 7 7 8 8 8 9 9 9 10 10 10 11 11 11 12 12 12 13 13 13 14 14 14 15 15 15 16 16 16 17 17 17 18 18 18 19 19 19 20 20 20 21 21 21 22 22 22 23 23 23 24 24 24 25 25 25 26 26 26 27 27 27 28 28 28 29 29 29 30 30 30 31 31 31 32 32 32 33 33 33 34 34 34 35 35 35 36 36 36 37 37 37 38 38 38 39 39 39 40 40 40 41 41 41 42 42 42 43 43 43 44 44 44 45 45 45 46 46 46 47 47 47 48 48 48 49 49 49 50 50 50 51 51 51 52 52 52 53 53 53 54 54 54 55 55 55 56 56 56 57 57 57 58 58 58 59 59 59 60 60 60 61 61 61 62 62 62 63 63 63 64 64 64 65 65 65 66 66 66 67 67 67 68 68 68 69 69 69 70 70 70 71 71 71 72 72 72 73 73 73 74 74 74 75 75 75 76 76 76 77 77 77 78 78 78 79 79 79 80 80 80 81 81 81 82 82 82 83 83 83 84 84 84 85 85 85 86 86 86 87 87 87 88 88 88 89 89 89 90 90 90 91 91 91 92 92 92 93 93 93 94 94 94 95 95 95 96 96 96 97 97 97 98 98 98 99 99 99 100 100 100 101 101 101 102 102 102 103 103 103 104 104 104 105 105 105 106 106 106 107 107 107 108 108 108 109 109 109 110 110 110 111 111 111 Gradle Test Executor 7 finished executing tests. 112 112 112 113 113 113 114 114 114 115 115 115 116 116 116 117 117 117 118 118 118 119 119 119 120 120 120 121 121 121 122 122 122 123 123 123 124 124 124 125 125 125 126 126 126 127 127 127 128 -128 128 129 -127 129 130 -126 130 131 -125 131 132 -124 132 133 -123 133 134 -122 134 135 -121 135 136 -120 136 137 -119 137 138 -118 138 139 -117 139 140 -116 140 141 -115 141 142 -114 142 143 -113 143 144 -112 144 145 -111 145 146 -110 146 147 -109 147 148 -108 148 149 -107 149 150 -106 150 151 -105 151 152 -104 152 153 -103 153 154 -102 154 155 -101 155 156 -100 156 157 -99 157 158 -98 158 159 -97 159 160 -96 160 org.broad.igv.track.TrackLoaderTestHeaded STANDARD_OUT You are trying to start a GUI in a headless environment. Aborting test org.broad.igv.sam.mods.BaseModificationsTest > testHiFINegativeAlignment STANDARD_OUT 161 -95 161 162 -94 162 163 -93 163 164 -92 164 165 -91 165 166 -90 166 167 -89 167 168 -88 168 169 -87 169 170 -86 170 171 -85 171 172 -84 172 173 -83 173 174 -82 174 175 -81 175 176 -80 176 177 -79 177 178 -78 178 179 -77 179 180 -76 180 181 -75 181 182 -74 182 183 -73 183 184 -72 184 185 -71 185 186 -70 186 187 -69 187 188 -68 188 189 -67 189 190 -66 190 191 -65 191 192 -64 192 193 -63 193 194 -62 194 195 -61 195 196 -60 196 197 -59 197 198 -58 198 199 -57 199 200 -56 200 201 -55 201 202 -54 202 203 -53 203 204 -52 204 205 -51 205 206 -50 206 207 -49 207 208 -48 208 209 -47 209 210 -46 210 211 -45 211 212 -44 212 213 -43 213 214 -42 214 215 -41 215 216 -40 216 217 -39 217 218 -38 218 org.broad.igv.tools.motiffinder.MotifFinderPluginHeadedTest STANDARD_OUT You are trying to start a GUI in a headless environment. Aborting test org.broad.igv.sam.mods.BaseModificationsTest > testHiFINegativeAlignment STANDARD_OUT 219 -37 219 220 -36 220 221 -35 221 222 -34 222 223 -33 223 224 -32 224 225 -31 225 226 -30 226 227 -29 227 228 -28 228 229 -27 229 230 -26 230 231 -25 231 232 -24 232 233 -23 233 234 -22 234 235 -21 235 Gradle Test Executor 8 finished executing tests. 236 -20 236 237 -19 237 238 -18 238 239 -17 239 240 -16 240 241 -15 241 242 -14 242 243 -13 243 244 -12 244 245 -11 245 246 -10 246 247 -9 247 248 -8 248 249 -7 249 250 -6 250 251 -5 251 252 -4 252 253 -3 253 254 -2 254 255 -1 255 org.broad.tribble.TribbleFeatureReaderTest > testQuery SKIPPED org.broad.tribble.TribbleFeatureReaderTest > testGetSequenceNames SKIPPED org.broad.igv.util.ResourceLocatorTest > testGetFormat STANDARD_OUT bam org.broad.igv.sam.AsciiLineReaderTest > testSpeed SKIPPED org.broad.igv.batch.CommandListenerTest STANDARD_OUT You are trying to start a GUI in a headless environment. Aborting test org.broad.igv.util.LittleEndianInputStreamTest > testRead SKIPPED org.broad.igv.sam.SamIndexTest > testGetIndexedChromosomes SKIPPED org.broad.igv.sam.mods.BaseModificationCountsTest > incrementCounts2 SKIPPED org.broad.igv.htsget.HtsgetReaderTest > testReadHeader SKIPPED org.broad.igv.htsget.HtsgetReaderTest > testReadData SKIPPED org.broad.igv.prefs.PreferencesManagerTest > getPreferences SKIPPED org.broad.igv.data.cufflinks.ExpDiffCodecTest > testsamplegene_expdiff STANDARD_ERROR SEVERE [Dec 22,2025 19:36] [ExpDiffCodec] LogRatio -1.79769e+308 cannot be parsed as a float org.broad.igv.sam.SamQueryTextReaderTest > testMoran SKIPPED org.broad.igv.sam.SamQueryTextReaderTest > testQuery SKIPPED org.broad.igv.sam.SamQueryTextReaderTest > testQuery2 SKIPPED org.broad.igv.sam.SamQueryTextReaderTest > testQuery3 SKIPPED org.broad.igv.data.cufflinks.ExpDiffCodecTest > testsamplegene_expdiff STANDARD_ERROR SEVERE [Dec 22,2025 19:36] [ExpDiffCodec] LogRatio 1.79769e+308 cannot be parsed as a float org.broad.igv.sam.cram.IGVReferenceSourceTest > testGetReferenceBasesCompressed SKIPPED org.broad.igv.sam.cram.IGVReferenceSourceTest > testGetReferenceBasesByRegionCompressed SKIPPED org.broad.igv.data.cufflinks.ExpDiffCodecTest > testsamplegene_expdiff STANDARD_ERROR SEVERE [Dec 22,2025 19:36] [ExpDiffCodec] LogRatio -1.79769e+308 cannot be parsed as a float org.broad.igv.sam.cram.IGVReferenceSourceTest > testGetReferenceBasesByRegion SKIPPED org.broad.igv.sam.cram.CRAMReaderTest > testQueryLocalBaiCram SKIPPED org.broad.igv.sam.cram.CRAMReaderTest > testRemoteCraiCram SKIPPED org.broad.igv.sam.cram.CRAMReaderTest > testIterateLocalCraiCram SKIPPED org.broad.igv.sam.cram.CRAMReaderTest > testQueryLocalCraiCram SKIPPED org.broad.igv.sam.cram.CRAMReaderTest > testRemoteBaiCram SKIPPED org.broad.igv.feature.genome.fasta.FastaBlockCompressedSequenceTest > compareSequences SKIPPED org.broad.igv.feature.genome.fasta.FastaBlockCompressedSequenceTest > findBlockContaining SKIPPED org.broad.igv.AbstractHeadlessTest > initializationError SKIPPED Gradle Test Executor 17 finished executing tests. Gradle Test Executor 18 finished executing tests. Gradle Test Executor 2 finished executing tests. Gradle Test Executor 14 finished executing tests. org.broad.igv.htsget.HtsgetBAMReaderTest > testQueryAlignments SKIPPED org.broad.igv.ucsc.bb.BBFileTest > testChromTree SKIPPED org.broad.igv.tools.motiffinder.MotifFinderPluginHeadlessTest STANDARD_OUT You are trying to start a GUI in a headless environment. Aborting test Gradle Test Executor 11 finished executing tests. org.broad.igv.htsget.HtsgetVariantSourceTest > testReadFeatures SKIPPED org.broad.igv.htsget.HtsgetVariantSourceTest > testGetHeader SKIPPED Gradle Test Executor 15 finished executing tests. Gradle Test Executor 16 finished executing tests. Gradle Test Executor 21 finished executing tests. org.broad.igv.util.HeapSortTest > tesArraySort STANDARD_OUT Random sort: 246 org.broad.igv.feature.ProbeToGeneMapTest > testAgilent SKIPPED org.broad.igv.feature.ProbeToGeneMapTest > testAffy SKIPPED org.broad.igv.feature.ProbeToGeneMapTest > testIllumina SKIPPED org.broad.igv.ucsc.bb.BBFeatureSourceTest > testBigInteract SKIPPED org.broad.igv.ucsc.bb.BBFeatureSourceTest > testBigRmsk SKIPPED org.broad.igv.ucsc.bb.BBFeatureSourceTest > testBigNarrowpeak SKIPPED org.broad.igv.tools.parsers.TestBEDCodecs > testGffTags SKIPPED org.broad.igv.tools.parsers.TestBEDCodecs > testLength1Feature SKIPPED org.broad.igv.sam.BAMFileReaderTest > testClose SKIPPED org.broad.igv.sam.BAMFileReaderTest > testQueryAgainstSam SKIPPED org.broad.igv.ui.panel.ReferenceFrameTestHeaded STANDARD_OUT You are trying to start a GUI in a headless environment. Aborting test Gradle Test Executor 19 finished executing tests. org.broad.igv.ucsc.bb.BBFeatureSourceTest > testBigGenePred SKIPPED Gradle Test Executor 4 finished executing tests. org.broad.igv.util.HeapSortTest > tesArraySort STANDARD_OUT Random sort (reversed): 185 Gradle Test Executor 13 finished executing tests. Gradle Test Executor 20 finished executing tests. Random sort (Arrays): 628 Sorted sort: 79 Reverse sorted sort: 81 Almost sorted sort: 92 Gradle Test Executor 3 finished executing tests. Finished generating test XML results (0.024 secs) into: /build/reproducible-path/igv-2.18.5+dfsg/build/test-results/test Generating HTML test report... Finished generating test html results (0.099 secs) into: /build/reproducible-path/igv-2.18.5+dfsg/build/reports/tests/test :test (Thread[#85,Task worker for ':' Thread 2,5,main]) completed. Took 7.874 secs. BUILD SUCCESSFUL in 18s 4 actionable tasks: 2 executed, 2 up-to-date create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=gradle dh_prep -O--buildsystem=gradle debian/rules override_dh_auto_install make[1]: Entering directory '/build/reproducible-path/igv-2.18.5+dfsg' dh_auto_install # Installing the icon of the software. mkdir -p debian/igv/usr/share/icons/hicolor/64x64/apps/ cp src/main/resources/org/broad/igv/ui/resources/IGV_64.png debian/igv/usr/share/icons/hicolor/64x64/apps/igv.png make[1]: Leaving directory '/build/reproducible-path/igv-2.18.5+dfsg' dh_install -O--buildsystem=gradle jh_installjavadoc -O--buildsystem=gradle Duplicate specification "author|A=s" for option "A" Duplicate specification "A" for option "A" dh_installdocs -O--buildsystem=gradle dh_installchangelogs -O--buildsystem=gradle dh_installman -O--buildsystem=gradle dh_installsystemduser -O--buildsystem=gradle dh_icons -O--buildsystem=gradle dh_perl -O--buildsystem=gradle dh_link -O--buildsystem=gradle jh_installlibs -O--buildsystem=gradle jh_classpath -O--buildsystem=gradle jh_manifest -O--buildsystem=gradle Duplicate specification "version|V" for option "V" Duplicate specification "version|V" for option "V" jh_exec -O--buildsystem=gradle jh_depends -O--buildsystem=gradle dh_strip_nondeterminism -O--buildsystem=gradle dh_compress -O--buildsystem=gradle dh_fixperms -O--buildsystem=gradle dh_missing -O--buildsystem=gradle dh_installdeb -O--buildsystem=gradle dh_gencontrol -O--buildsystem=gradle dh_md5sums -O--buildsystem=gradle dh_builddeb -O--buildsystem=gradle dpkg-deb: building package 'igv' in '../igv_2.18.5+dfsg-1_all.deb'. dpkg-genbuildinfo --build=binary -O../igv_2.18.5+dfsg-1_amd64.buildinfo dpkg-genchanges --build=binary -O../igv_2.18.5+dfsg-1_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/2277421 and its subdirectories I: Current time: Mon Dec 22 19:36:51 -12 2025 I: pbuilder-time-stamp: 1766475411 Wed Nov 20 01:13:53 UTC 2024 I: 1st build successful. Starting 2nd build on remote node ionos1-amd64.debian.net. Wed Nov 20 01:13:53 UTC 2024 I: Preparing to do remote build '2' on ionos1-amd64.debian.net. Wed Nov 20 01:18:51 UTC 2024 I: Deleting $TMPDIR on ionos1-amd64.debian.net. Wed Nov 20 01:18:51 UTC 2024 I: igv_2.18.5+dfsg-1_amd64.changes: Format: 1.8 Date: Sun, 13 Oct 2024 21:58:58 +0200 Source: igv Binary: igv Architecture: all Version: 2.18.5+dfsg-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Pierre Gruet Description: igv - Integrative Genomics Viewer Changes: igv (2.18.5+dfsg-1) unstable; urgency=medium . * New upstream version 2.18.5+dfsg * Refreshing patches * Raising Standards version to 4.7.0 (no change) * Refreshing the list of files to exclude when repacking * Skipping more tests requiring the network Checksums-Sha1: c9528e4b2e68544d4373d406b739c909db05b19a 3315196 igv_2.18.5+dfsg-1_all.deb f7e21d54d8258e965f2406c6f53f4c546a264ff1 19315 igv_2.18.5+dfsg-1_amd64.buildinfo Checksums-Sha256: c2c3f45741bc4c62af698aa9855d838340ffc95e097c5937a92215b5289a24c3 3315196 igv_2.18.5+dfsg-1_all.deb e4e49515fb56e52c3b00b8b21344aa10f74f4bd667c6df8c57ac06187611e6dc 19315 igv_2.18.5+dfsg-1_amd64.buildinfo Files: 5e95608b5ddc873ec05038e9e84f0987 3315196 science optional igv_2.18.5+dfsg-1_all.deb b502f0a919e28c4058463fb7ddb61cc9 19315 science optional igv_2.18.5+dfsg-1_amd64.buildinfo Wed Nov 20 01:18:52 UTC 2024 I: diffoscope 283 will be used to compare the two builds: Running as unit: rb-diffoscope-amd64_20-36848.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.1ZJqpUOp/igv_2.18.5+dfsg-1.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.1ZJqpUOp/igv_2.18.5+dfsg-1.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.1ZJqpUOp/igv_2.18.5+dfsg-1.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.1ZJqpUOp/b1/igv_2.18.5+dfsg-1_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.1ZJqpUOp/b2/igv_2.18.5+dfsg-1_amd64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.368s) 0.368s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.044s) 0.044s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 673ms CPU time consumed: 668ms Wed Nov 20 01:18:54 UTC 2024 I: diffoscope 283 found no differences in the changes files, and a .buildinfo file also exists. Wed Nov 20 01:18:54 UTC 2024 I: igv from unstable built successfully and reproducibly on amd64. Wed Nov 20 01:18:55 UTC 2024 I: Submitting .buildinfo files to external archives: Wed Nov 20 01:18:55 UTC 2024 I: Submitting 20K b1/igv_2.18.5+dfsg-1_amd64.buildinfo.asc Wed Nov 20 01:18:56 UTC 2024 I: Submitting 20K b2/igv_2.18.5+dfsg-1_amd64.buildinfo.asc Wed Nov 20 01:18:56 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Wed Nov 20 01:18:56 UTC 2024 I: Done submitting .buildinfo files. Wed Nov 20 01:18:56 UTC 2024 I: Removing signed igv_2.18.5+dfsg-1_amd64.buildinfo.asc files: removed './b1/igv_2.18.5+dfsg-1_amd64.buildinfo.asc' removed './b2/igv_2.18.5+dfsg-1_amd64.buildinfo.asc'