Thu Aug 22 18:23:23 UTC 2024 I: starting to build emperor/unstable/amd64 on jenkins on '2024-08-22 18:23' Thu Aug 22 18:23:23 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_36/25306/console.log Thu Aug 22 18:23:23 UTC 2024 I: Downloading source for unstable/emperor=1.0.3+ds-9.1 --2024-08-22 18:23:24-- http://deb.debian.org/debian/pool/main/e/emperor/emperor_1.0.3%2bds-9.1.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2367 (2.3K) [text/prs.lines.tag] Saving to: ‘emperor_1.0.3+ds-9.1.dsc’ 0K .. 100% 353M=0s 2024-08-22 18:23:24 (353 MB/s) - ‘emperor_1.0.3+ds-9.1.dsc’ saved [2367/2367] Thu Aug 22 18:23:24 UTC 2024 I: emperor_1.0.3+ds-9.1.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: emperor Binary: python3-emperor, python3-emperor-doc Architecture: all Version: 1.0.3+ds-9.1 Maintainer: Debian Med Packaging Team Uploaders: Liubov Chuprikova , Steffen Moeller Homepage: https://biocore.github.io/emperor/ Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/emperor Vcs-Git: https://salsa.debian.org/med-team/emperor.git Testsuite: autopkgtest Testsuite-Triggers: python3-all, python3-click, python3-notebook, python3-pytest Build-Depends: debhelper-compat (= 13), dh-sequence-python3, python3-all, python3-setuptools, python3-sphinx, python3-sphinx-bootstrap-theme, python3-numpydoc, python3-numpy , python3-pandas , python3-skbio (>= 0.5.8-2exp1~) , python3-click , node-jsdoc2 , python3-notebook , python3-pytest , libjs-qunit Package-List: python3-emperor deb python optional arch=all python3-emperor-doc deb doc optional arch=all Checksums-Sha1: 26112a50136e50fde7c51046f4d8d7f3678c46a2 17953296 emperor_1.0.3+ds.orig.tar.xz ef30227a81c2ada57f208d5bb1ee571eccbfbd49 9144 emperor_1.0.3+ds-9.1.debian.tar.xz Checksums-Sha256: 32d2b77b7f3c6aa425a5fe6e77e2441c5bf319fd71c971269f82ce7d8e4f529e 17953296 emperor_1.0.3+ds.orig.tar.xz 2056aeb04bac4f719b130a45e334435b19e311f0f1fef09916e959e36b9a7f60 9144 emperor_1.0.3+ds-9.1.debian.tar.xz Files: faf7d5aab389b40b013ddd781003dff8 17953296 emperor_1.0.3+ds.orig.tar.xz 8ffd93611ed91be16260dd896d9c7cdf 9144 emperor_1.0.3+ds-9.1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQHEBAEBCgAuFiEEQGIgyLhVKAI3jM5BH1x6i0VWQxQFAmaC9rgQHGJhZ2VAZGVi aWFuLm9yZwAKCRAfXHqLRVZDFJakDADRnIUDPvaQH1oCw2qr34t8BxVP7HPz3QDN rKNNxxbr39ZjTnOeHBPMayUW8hrg8RQ8iOLb8CISKMK+DtdGjBKpey1sujvR5+K7 vw96iL41ExvBe2l/BTR/qmzP72IRLfPHZbPlLPGnfXn4WCqCtmjfki0o05rbgW21 d9pOb3zN/RXJRIWC9KzBMN+Z6rFHGzu6hyi1hVV8ZiK1whU2PqOSpbVeXndx6e5u /BucF7yzBAKDncTriSR3cH4R+wnYv+EVJsxWdj9QJIoU/0F/fMJrXc7BqbvLTpaM oJwLH9D5/fTk5pgEfEQ3576+S1GgYYb2p1LFB3O3tUsFGXXjv7llCUbLD0k5E3R7 KoZxe2bSnupPQyK7cVXZUG+yXElmro0vqPJ3WCrxe8PSx2nSR3Wth3z1FqWoWKOj d7LWkxSjoYcpuwH88a9NgH2FWm+i0x69jOzo9A80iV1MyMiqGSflEpslMjLWjQBJ hSvqXofgzK7ldotLv5zXOiqCWoGMt4M= =cSYb -----END PGP SIGNATURE----- Thu Aug 22 18:23:24 UTC 2024 I: Checking whether the package is not for us Thu Aug 22 18:23:24 UTC 2024 I: Starting 1st build on remote node infom02-amd64.debian.net. Thu Aug 22 18:23:24 UTC 2024 I: Preparing to do remote build '1' on infom02-amd64.debian.net. Thu Aug 22 18:29:30 UTC 2024 I: Deleting $TMPDIR on infom02-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Wed Sep 24 12:46:26 -12 2025 I: pbuilder-time-stamp: 1758761186 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [emperor_1.0.3+ds-9.1.dsc] I: copying [./emperor_1.0.3+ds.orig.tar.xz] I: copying [./emperor_1.0.3+ds-9.1.debian.tar.xz] I: Extracting source gpgv: Signature made Mon Jul 1 18:34:32 2024 gpgv: using RSA key 406220C8B8552802378CCE411F5C7A8B45564314 gpgv: issuer "bage@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./emperor_1.0.3+ds-9.1.dsc: no acceptable signature found dpkg-source: info: extracting emperor in emperor-1.0.3+ds dpkg-source: info: unpacking emperor_1.0.3+ds.orig.tar.xz dpkg-source: info: unpacking emperor_1.0.3+ds-9.1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying do_not_use_custom_numpydoc.patch dpkg-source: info: applying correct_jsdoc_arguments.patch dpkg-source: info: applying EditSectionTitle.patch dpkg-source: info: applying 8b803cd81586b832550eaa2428fa2d0dd581d35f.patch dpkg-source: info: applying no_future_dependency.patch dpkg-source: info: applying python3.12,patch dpkg-source: info: applying pandas-2.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3746715/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='9e677f8defd34ba88c138a1a47a98612' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='3746715' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.nVOWOUvh/pbuilderrc_nDnP --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.nVOWOUvh/b1 --logfile b1/build.log emperor_1.0.3+ds-9.1.dsc' SUDO_GID='109' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' I: uname -a Linux infom02-amd64 6.9.7+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.9.7-1~bpo12+1 (2024-07-03) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin I: user script /srv/workspace/pbuilder/3746715/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-sequence-python3, python3-all, python3-setuptools, python3-sphinx, python3-sphinx-bootstrap-theme, python3-numpydoc, python3-numpy, python3-pandas, python3-skbio (>= 0.5.8-2exp1~), python3-click, node-jsdoc2, python3-notebook, python3-pytest, libjs-qunit dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19730 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on python3-all; however: Package python3-all is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx; however: Package python3-sphinx is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx-bootstrap-theme; however: Package python3-sphinx-bootstrap-theme is not installed. pbuilder-satisfydepends-dummy depends on python3-numpydoc; however: Package python3-numpydoc is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy; however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-pandas; however: Package python3-pandas is not installed. pbuilder-satisfydepends-dummy depends on python3-skbio (>= 0.5.8-2exp1~); however: Package python3-skbio is not installed. pbuilder-satisfydepends-dummy depends on python3-click; however: Package python3-click is not installed. pbuilder-satisfydepends-dummy depends on node-jsdoc2; however: Package node-jsdoc2 is not installed. pbuilder-satisfydepends-dummy depends on python3-notebook; however: Package python3-notebook is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. pbuilder-satisfydepends-dummy depends on libjs-qunit; however: Package libjs-qunit is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} docutils-common{a} dwz{a} file{a} fonts-font-awesome{a} fonts-glyphicons-halflings{a} fonts-mathjax{a} gdb{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libaec0{a} libarchive-zip-perl{a} libargon2-1{a} libbabeltrace1{a} libblas3{a} libbrotli1{a} libcares2{a} libcom-err2{a} libcurl3t64-gnutls{a} libcurl4t64{a} libdebhelper-perl{a} libdebuginfod-common{a} libdebuginfod1t64{a} libdw1t64{a} libelf1t64{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libgfortran5{a} libglib2.0-0t64{a} libgssapi-krb5-2{a} libhdf5-103-1t64{a} libhdf5-hl-100t64{a} libicu72{a} libipt2{a} libjs-backbone{a} libjs-bootstrap{a} libjs-bootstrap-tour{a} libjs-codemirror{a} libjs-es6-promise{a} libjs-jed{a} libjs-jquery{a} libjs-jquery-typeahead{a} libjs-jquery-ui{a} libjs-marked{a} libjs-mathjax{a} libjs-moment{a} libjs-prototype{a} libjs-qunit{a} libjs-requirejs{a} libjs-requirejs-text{a} libjs-sphinxdoc{a} libjs-text-encoding{a} libjs-underscore{a} libjs-xterm{a} libjson-perl{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} liblbfgsb0{a} libldap-2.5-0{a} liblzf1{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libnghttp3-9{a} libngtcp2-16{a} libngtcp2-crypto-gnutls8{a} libnode115{a} libnorm1t64{a} libnsl2{a} libpgm-5.3-0t64{a} libpipeline1{a} libpsl5t64{a} libpython3-stdlib{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.12t64{a} libreadline8t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsodium23{a} libsource-highlight-common{a} libsource-highlight4t64{a} libssh2-1t64{a} libssw0{a} libsz2{a} libtirpc-common{a} libtirpc3t64{a} libtool{a} libuchardet0{a} libuv1t64{a} libxml2{a} libzmq5{a} m4{a} man-db{a} media-types{a} netbase{a} node-acorn{a} node-cjs-module-lexer{a} node-jed{a} node-jsdoc2{a} node-undici{a} node-xtend{a} nodejs{a} openssl{a} po-debconf{a} python-babel-localedata{a} python-tinycss2-common{a} python3{a} python3-alabaster{a} python3-all{a} python3-argon2{a} python3-asttokens{a} python3-attr{a} python3-autocommand{a} python3-babel{a} python3-biom-format{a} python3-bleach{a} python3-bs4{a} python3-certifi{a} python3-cffi-backend{a} python3-chardet{a} python3-charset-normalizer{a} python3-click{a} python3-colorama{a} python3-comm{a} python3-coverage{a} python3-dateutil{a} python3-debugpy{a} python3-decorator{a} python3-defusedxml{a} python3-docutils{a} python3-executing{a} python3-fastjsonschema{a} python3-h5py{a} python3-h5py-serial{a} python3-hatch-vcs{a} python3-hatchling{a} python3-hdmedians{a} python3-html5lib{a} python3-idna{a} python3-imagesize{a} python3-inflect{a} python3-iniconfig{a} python3-ipykernel{a} python3-ipython{a} python3-ipython-genutils{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jedi{a} python3-jinja2{a} python3-jsonschema{a} python3-jsonschema-specifications{a} python3-jupyter-client{a} python3-jupyter-core{a} python3-jupyterlab-pygments{a} python3-markupsafe{a} python3-matplotlib-inline{a} python3-minimal{a} python3-mistune{a} python3-more-itertools{a} python3-natsort{a} python3-nbclient{a} python3-nbconvert{a} python3-nbformat{a} python3-nest-asyncio{a} python3-notebook{a} python3-numpy{a} python3-numpydoc{a} python3-packaging{a} python3-pandas{a} python3-pandas-lib{a} python3-pandocfilters{a} python3-parso{a} python3-pathspec{a} python3-patsy{a} python3-pexpect{a} python3-pkg-resources{a} python3-platformdirs{a} python3-pluggy{a} python3-prometheus-client{a} python3-prompt-toolkit{a} python3-psutil{a} python3-ptyprocess{a} python3-pure-eval{a} python3-py{a} python3-pygments{a} python3-pytest{a} python3-referencing{a} python3-requests{a} python3-roman{a} python3-rpds-py{a} python3-scipy{a} python3-send2trash{a} python3-setuptools{a} python3-setuptools-scm{a} python3-six{a} python3-skbio{a} python3-snowballstemmer{a} python3-soupsieve{a} python3-sphinx{a} python3-sphinx-bootstrap-theme{a} python3-stack-data{a} python3-statsmodels{a} python3-statsmodels-lib{a} python3-tabulate{a} python3-terminado{a} python3-tinycss2{a} python3-tornado{a} python3-traitlets{a} python3-trove-classifiers{a} python3-typeguard{a} python3-typeshed{a} python3-typing-extensions{a} python3-tz{a} python3-urllib3{a} python3-wcwidth{a} python3-webencodings{a} python3-zipp{a} python3-zmq{a} python3.12{a} python3.12-minimal{a} readline-common{a} sensible-utils{a} sgml-base{a} sphinx-common{a} tzdata{a} ucf{a} xml-core{a} The following packages are RECOMMENDED but will NOT be installed: curl javascript-common krb5-locales libarchive-cpio-perl libc6-dbg libglib2.0-data libjson-xs-perl libldap-common libltdl-dev libmail-sendmail-perl libpaper-utils libsasl2-modules lynx nodejs-doc pandoc publicsuffix python3-bottleneck python3-cvxopt python3-gi python3-ipywidgets python3-joblib python3-json-pointer python3-lxml python3-matplotlib python3-numba python3-numexpr python3-odf python3-openpyxl python3-pil python3-rfc3987 python3-tables python3-uritemplate python3-webcolors shared-mime-info wget xdg-user-dirs 0 packages upgraded, 243 newly installed, 0 to remove and 0 not upgraded. Need to get 127 MB of archives. After unpacking 600 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get: 2 http://deb.debian.org/debian unstable/main amd64 ucf all 3.0043+nmu1 [55.2 kB] Get: 3 http://deb.debian.org/debian unstable/main amd64 libdebuginfod-common all 0.191-2 [22.9 kB] Get: 4 http://deb.debian.org/debian unstable/main amd64 libpython3.12-minimal amd64 3.12.5-3 [813 kB] Get: 5 http://deb.debian.org/debian unstable/main amd64 libexpat1 amd64 2.6.2-1 [103 kB] Get: 6 http://deb.debian.org/debian unstable/main amd64 python3.12-minimal amd64 3.12.5-3 [2168 kB] Get: 7 http://deb.debian.org/debian unstable/main amd64 python3-minimal amd64 3.12.5-1 [26.7 kB] Get: 8 http://deb.debian.org/debian unstable/main amd64 media-types all 10.1.0 [26.9 kB] Get: 9 http://deb.debian.org/debian unstable/main amd64 netbase all 6.4 [12.8 kB] Get: 10 http://deb.debian.org/debian unstable/main amd64 tzdata all 2024a-4 [255 kB] Get: 11 http://deb.debian.org/debian unstable/main amd64 libkrb5support0 amd64 1.21.3-3 [32.5 kB] Get: 12 http://deb.debian.org/debian unstable/main amd64 libcom-err2 amd64 1.47.1-1 [22.9 kB] Get: 13 http://deb.debian.org/debian unstable/main amd64 libk5crypto3 amd64 1.21.3-3 [79.9 kB] Get: 14 http://deb.debian.org/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-3 [8952 B] Get: 15 http://deb.debian.org/debian unstable/main amd64 libkrb5-3 amd64 1.21.3-3 [324 kB] Get: 16 http://deb.debian.org/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.21.3-3 [136 kB] Get: 17 http://deb.debian.org/debian unstable/main amd64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get: 18 http://deb.debian.org/debian unstable/main amd64 libtirpc3t64 amd64 1.3.4+ds-1.3 [82.7 kB] Get: 19 http://deb.debian.org/debian unstable/main amd64 libnsl2 amd64 1.3.0-3+b2 [40.3 kB] Get: 20 http://deb.debian.org/debian unstable/main amd64 readline-common all 8.2-5 [69.3 kB] Get: 21 http://deb.debian.org/debian unstable/main amd64 libreadline8t64 amd64 8.2-5 [169 kB] Get: 22 http://deb.debian.org/debian unstable/main amd64 libpython3.12-stdlib amd64 3.12.5-3 [1960 kB] Get: 23 http://deb.debian.org/debian unstable/main amd64 python3.12 amd64 3.12.5-3 [667 kB] Get: 24 http://deb.debian.org/debian unstable/main amd64 libpython3-stdlib amd64 3.12.5-1 [9588 B] Get: 25 http://deb.debian.org/debian unstable/main amd64 python3 amd64 3.12.5-1 [27.6 kB] Get: 26 http://deb.debian.org/debian unstable/main amd64 sgml-base all 1.31 [15.4 kB] Get: 27 http://deb.debian.org/debian unstable/main amd64 openssl amd64 3.3.1-7 [1381 kB] Get: 28 http://deb.debian.org/debian unstable/main amd64 ca-certificates all 20240203 [158 kB] Get: 29 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3 [314 kB] Get: 30 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3 [105 kB] Get: 31 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.45-3 [42.9 kB] Get: 32 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.22.5-2 [200 kB] Get: 33 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b1 [68.8 kB] Get: 34 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-5 [1181 kB] Get: 35 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.40.2-7 [96.8 kB] Get: 36 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.7-2 [38.0 kB] Get: 37 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.12.1-3 [1414 kB] Get: 38 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.19-4 [287 kB] Get: 39 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.72-3 [493 kB] Get: 40 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 41 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 42 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.22.5-2 [723 kB] Get: 43 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.19 [89.7 kB] Get: 44 http://deb.debian.org/debian unstable/main amd64 libtool all 2.4.7-7 [517 kB] Get: 45 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 46 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 47 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 48 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 49 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.191-2 [188 kB] Get: 50 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 51 http://deb.debian.org/debian unstable/main amd64 libicu72 amd64 72.1-5 [9396 kB] Get: 52 http://deb.debian.org/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg-3+b1 [671 kB] Get: 53 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.22.5-2 [1601 kB] Get: 54 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 55 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 56 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.19 [916 kB] Get: 57 http://deb.debian.org/debian unstable/main amd64 python3-autocommand all 2.2.2-3 [13.6 kB] Get: 58 http://deb.debian.org/debian unstable/main amd64 python3-more-itertools all 10.3.0-1 [62.0 kB] Get: 59 http://deb.debian.org/debian unstable/main amd64 python3-typing-extensions all 4.12.2-2 [73.0 kB] Get: 60 http://deb.debian.org/debian unstable/main amd64 python3-typeguard all 4.3.0-1 [36.5 kB] Get: 61 http://deb.debian.org/debian unstable/main amd64 python3-inflect all 7.3.1-1 [42.2 kB] Get: 62 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.context all 6.0.0-1 [7984 B] Get: 63 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.functools all 4.0.2-1 [11.7 kB] Get: 64 http://deb.debian.org/debian unstable/main amd64 python3-pkg-resources all 73.0.0-1 [212 kB] Get: 65 http://deb.debian.org/debian unstable/main amd64 python3-zipp all 3.20.0-1 [10.5 kB] Get: 66 http://deb.debian.org/debian unstable/main amd64 python3-setuptools all 73.0.0-1 [748 kB] Get: 67 http://deb.debian.org/debian unstable/main amd64 dh-python all 6.20240603 [109 kB] Get: 68 http://deb.debian.org/debian unstable/main amd64 xml-core all 0.19 [20.1 kB] Get: 69 http://deb.debian.org/debian unstable/main amd64 docutils-common all 0.21.2+dfsg-2 [128 kB] Get: 70 http://deb.debian.org/debian unstable/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [517 kB] Get: 71 http://deb.debian.org/debian unstable/main amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [162 kB] Get: 72 http://deb.debian.org/debian unstable/main amd64 fonts-mathjax all 2.7.9+dfsg-1 [2210 kB] Get: 73 http://deb.debian.org/debian unstable/main amd64 libdw1t64 amd64 0.191-2 [247 kB] Get: 74 http://deb.debian.org/debian unstable/main amd64 libglib2.0-0t64 amd64 2.81.2-1 [1497 kB] Get: 75 http://deb.debian.org/debian unstable/main amd64 libbabeltrace1 amd64 1.5.11-3+b7 [176 kB] Get: 76 http://deb.debian.org/debian unstable/main amd64 libbrotli1 amd64 1.1.0-2+b4 [300 kB] Get: 77 http://deb.debian.org/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-7 [19.6 kB] Get: 78 http://deb.debian.org/debian unstable/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-7 [57.2 kB] Get: 79 http://deb.debian.org/debian unstable/main amd64 libldap-2.5-0 amd64 2.5.18+dfsg-3 [187 kB] Get: 80 http://deb.debian.org/debian unstable/main amd64 libnghttp2-14 amd64 1.62.1-2 [74.9 kB] Get: 81 http://deb.debian.org/debian unstable/main amd64 libnghttp3-9 amd64 1.4.0-1 [63.1 kB] Get: 82 http://deb.debian.org/debian unstable/main amd64 libngtcp2-16 amd64 1.6.0-1 [122 kB] Get: 83 http://deb.debian.org/debian unstable/main amd64 libngtcp2-crypto-gnutls8 amd64 1.6.0-1 [19.6 kB] Get: 84 http://deb.debian.org/debian unstable/main amd64 libpsl5t64 amd64 0.21.2-1.1 [56.8 kB] Get: 85 http://deb.debian.org/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b4 [58.5 kB] Get: 86 http://deb.debian.org/debian unstable/main amd64 libssh2-1t64 amd64 1.11.0-7 [216 kB] Get: 87 http://deb.debian.org/debian unstable/main amd64 libcurl3t64-gnutls amd64 8.9.1-2 [470 kB] Get: 88 http://deb.debian.org/debian unstable/main amd64 libdebuginfod1t64 amd64 0.191-2 [28.2 kB] Get: 89 http://deb.debian.org/debian unstable/main amd64 libipt2 amd64 2.0.6-1 [43.2 kB] Get: 90 http://deb.debian.org/debian unstable/main amd64 libpython3.12t64 amd64 3.12.5-3 [2147 kB] Get: 91 http://deb.debian.org/debian unstable/main amd64 libsource-highlight-common all 3.1.9-4.3 [77.5 kB] Get: 92 http://deb.debian.org/debian unstable/main amd64 libsource-highlight4t64 amd64 3.1.9-4.3 [324 kB] Get: 93 http://deb.debian.org/debian unstable/main amd64 gdb amd64 15.1-1 [4382 kB] Get: 94 http://deb.debian.org/debian unstable/main amd64 libaec0 amd64 1.1.3-1 [23.4 kB] Get: 95 http://deb.debian.org/debian unstable/main amd64 libargon2-1 amd64 0~20190702+dfsg-4+b1 [21.1 kB] Get: 96 http://deb.debian.org/debian unstable/main amd64 libblas3 amd64 3.12.0-3 [148 kB] Get: 97 http://deb.debian.org/debian unstable/main amd64 libcares2 amd64 1.33.0-1 [80.0 kB] Get: 98 http://deb.debian.org/debian unstable/main amd64 libcurl4t64 amd64 8.9.1-2 [463 kB] Get: 99 http://deb.debian.org/debian unstable/main amd64 libgfortran5 amd64 14.2.0-3 [837 kB] Get: 100 http://deb.debian.org/debian unstable/main amd64 libsz2 amd64 1.1.3-1 [7740 B] Get: 101 http://deb.debian.org/debian unstable/main amd64 libhdf5-103-1t64 amd64 1.10.10+repack-4 [1253 kB] Get: 102 http://deb.debian.org/debian unstable/main amd64 libhdf5-hl-100t64 amd64 1.10.10+repack-4 [63.9 kB] Get: 103 http://deb.debian.org/debian unstable/main amd64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 104 http://deb.debian.org/debian unstable/main amd64 libjs-backbone all 1.4.1~dfsg+~1.4.15-3 [186 kB] Get: 105 http://deb.debian.org/debian unstable/main amd64 libjs-bootstrap all 3.4.1+dfsg-3 [172 kB] Get: 106 http://deb.debian.org/debian unstable/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 107 http://deb.debian.org/debian unstable/main amd64 libjs-bootstrap-tour all 0.12.0+dfsg-5 [20.9 kB] Get: 108 http://deb.debian.org/debian unstable/main amd64 libjs-codemirror all 5.65.0+~cs5.83.9-3 [774 kB] Get: 109 http://deb.debian.org/debian unstable/main amd64 libjs-es6-promise all 4.2.8-12 [15.9 kB] Get: 110 http://deb.debian.org/debian unstable/main amd64 node-jed all 1.1.1-4 [14.7 kB] Get: 111 http://deb.debian.org/debian unstable/main amd64 libjs-jed all 1.1.1-4 [3772 B] Get: 112 http://deb.debian.org/debian unstable/main amd64 libjs-jquery-typeahead all 2.11.0+dfsg1-3 [47.7 kB] Get: 113 http://deb.debian.org/debian unstable/main amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get: 114 http://deb.debian.org/debian unstable/main amd64 libjs-marked all 4.2.3+ds+~4.0.7-3 [34.7 kB] Get: 115 http://deb.debian.org/debian unstable/main amd64 libjs-mathjax all 2.7.9+dfsg-1 [5667 kB] Get: 116 http://deb.debian.org/debian unstable/main amd64 libjs-moment all 2.29.4+ds-1 [155 kB] Get: 117 http://deb.debian.org/debian unstable/main amd64 libjs-prototype all 1.7.3-1 [44.3 kB] Get: 118 http://deb.debian.org/debian unstable/main amd64 libjs-qunit all 1.23.1~dfsg-3.2 [133 kB] Get: 119 http://deb.debian.org/debian unstable/main amd64 libjs-requirejs all 2.3.7+ds+~2.1.37-1 [196 kB] Get: 120 http://deb.debian.org/debian unstable/main amd64 libjs-requirejs-text all 2.0.12-1.1 [9016 B] Get: 121 http://deb.debian.org/debian unstable/main amd64 libjs-sphinxdoc all 7.4.7-2 [158 kB] Get: 122 http://deb.debian.org/debian unstable/main amd64 libjs-text-encoding all 0.7.0-5 [104 kB] Get: 123 http://deb.debian.org/debian unstable/main amd64 libjs-xterm all 5.3.0-3 [456 kB] Get: 124 http://deb.debian.org/debian unstable/main amd64 libjson-perl all 4.10000-1 [87.5 kB] Get: 125 http://deb.debian.org/debian unstable/main amd64 liblapack3 amd64 3.12.0-3 [2407 kB] Get: 126 http://deb.debian.org/debian unstable/main amd64 liblbfgsb0 amd64 3.0+dfsg.4-1+b1 [29.1 kB] Get: 127 http://deb.debian.org/debian unstable/main amd64 liblzf1 amd64 3.6-4+b1 [10.4 kB] Get: 128 http://deb.debian.org/debian unstable/main amd64 libuv1t64 amd64 1.48.0-5 [148 kB] Get: 129 http://deb.debian.org/debian unstable/main amd64 node-xtend all 4.0.2-3 [3932 B] Get: 130 http://deb.debian.org/debian unstable/main amd64 nodejs amd64 20.16.0+dfsg-1 [346 kB] Get: 131 http://deb.debian.org/debian unstable/main amd64 node-acorn all 8.8.1+ds+~cs25.17.7-2 [128 kB] Get: 132 http://deb.debian.org/debian unstable/main amd64 node-cjs-module-lexer all 1.2.3+dfsg-1 [30.6 kB] Get: 133 http://deb.debian.org/debian unstable/main amd64 node-undici all 5.28.4+dfsg1+~cs23.12.11-2 [314 kB] Get: 134 http://deb.debian.org/debian unstable/main amd64 libnode115 amd64 20.16.0+dfsg-1 [12.0 MB] Get: 135 http://deb.debian.org/debian unstable/main amd64 libnorm1t64 amd64 1.5.9+dfsg-3.1 [221 kB] Get: 136 http://deb.debian.org/debian unstable/main amd64 libpgm-5.3-0t64 amd64 5.3.128~dfsg-2.1 [161 kB] Get: 137 http://deb.debian.org/debian unstable/main amd64 libsodium23 amd64 1.0.18-1+b1 [163 kB] Get: 138 http://deb.debian.org/debian unstable/main amd64 libssw0 amd64 1.1-15 [20.9 kB] Get: 139 http://deb.debian.org/debian unstable/main amd64 libzmq5 amd64 4.3.5-1+b2 [281 kB] Get: 140 http://deb.debian.org/debian unstable/main amd64 node-jsdoc2 all 2.4.0-3 [67.0 kB] Get: 141 http://deb.debian.org/debian unstable/main amd64 python-babel-localedata all 2.14.0-1 [5701 kB] Get: 142 http://deb.debian.org/debian unstable/main amd64 python-tinycss2-common all 1.3.0-1 [31.9 kB] Get: 143 http://deb.debian.org/debian unstable/main amd64 python3-alabaster all 0.7.16-0.1 [27.9 kB] Get: 144 http://deb.debian.org/debian unstable/main amd64 python3-all amd64 3.12.5-1 [1044 B] Get: 145 http://deb.debian.org/debian unstable/main amd64 python3-cffi-backend amd64 1.17.0-1 [87.2 kB] Get: 146 http://deb.debian.org/debian unstable/main amd64 python3-argon2 amd64 21.1.0-2 [22.8 kB] Get: 147 http://deb.debian.org/debian unstable/main amd64 python3-six all 1.16.0-7 [16.4 kB] Get: 148 http://deb.debian.org/debian unstable/main amd64 python3-asttokens all 2.4.1-1 [20.6 kB] Get: 149 http://deb.debian.org/debian unstable/main amd64 python3-attr all 24.2.0-1 [68.4 kB] Get: 150 http://deb.debian.org/debian unstable/main amd64 python3-tz all 2024.1-2 [30.9 kB] Get: 151 http://deb.debian.org/debian unstable/main amd64 python3-babel all 2.14.0-1 [111 kB] Get: 152 http://deb.debian.org/debian unstable/main amd64 python3-numpy amd64 1:1.26.4+ds-11 [4236 kB] Get: 153 http://deb.debian.org/debian unstable/main amd64 python3-h5py-serial amd64 3.11.0-5 [975 kB] Get: 154 http://deb.debian.org/debian unstable/main amd64 python3-h5py all 3.11.0-5 [14.7 kB] Get: 155 http://deb.debian.org/debian unstable/main amd64 python3-colorama all 0.4.6-4 [36.2 kB] Get: 156 http://deb.debian.org/debian unstable/main amd64 python3-click all 8.1.7-2 [94.3 kB] Get: 157 http://deb.debian.org/debian unstable/main amd64 python3-dateutil all 2.9.0-2 [79.4 kB] Get: 158 http://deb.debian.org/debian unstable/main amd64 python3-pandas-lib amd64 2.2.2+dfsg-4+b1 [4115 kB] Get: 159 http://deb.debian.org/debian unstable/main amd64 python3-pandas all 2.2.2+dfsg-4 [3095 kB] Get: 160 http://deb.debian.org/debian unstable/main amd64 python3-decorator all 5.1.1-5 [15.1 kB] Get: 161 http://deb.debian.org/debian unstable/main amd64 python3-scipy amd64 1.13.1-3 [16.7 MB] Get: 162 http://deb.debian.org/debian unstable/main amd64 python3-biom-format amd64 2.1.16-1+b1 [145 kB] Get: 163 http://deb.debian.org/debian unstable/main amd64 python3-webencodings all 0.5.1-5 [11.1 kB] Get: 164 http://deb.debian.org/debian unstable/main amd64 python3-html5lib all 1.1-6 [90.5 kB] Get: 165 http://deb.debian.org/debian unstable/main amd64 python3-bleach all 6.1.0-2 [50.7 kB] Get: 166 http://deb.debian.org/debian unstable/main amd64 python3-soupsieve all 2.6-1 [38.3 kB] Get: 167 http://deb.debian.org/debian unstable/main amd64 python3-bs4 all 4.12.3-3 [133 kB] Get: 168 http://deb.debian.org/debian unstable/main amd64 python3-certifi all 2024.6.2-1 [157 kB] Get: 169 http://deb.debian.org/debian unstable/main amd64 python3-chardet all 5.2.0+dfsg-1 [107 kB] Get: 170 http://deb.debian.org/debian unstable/main amd64 python3-charset-normalizer amd64 3.3.2-2 [116 kB] Get: 171 http://deb.debian.org/debian unstable/main amd64 python3-traitlets all 5.14.3+really5.14.3-1 [70.9 kB] Get: 172 http://deb.debian.org/debian unstable/main amd64 python3-comm all 0.2.1-1 [8104 B] Get: 173 http://deb.debian.org/debian unstable/main amd64 python3-coverage amd64 7.6.0+dfsg1-1 [175 kB] Get: 174 http://deb.debian.org/debian unstable/main amd64 python3-debugpy amd64 1.8.2+ds-5 [576 kB] Get: 175 http://deb.debian.org/debian unstable/main amd64 python3-defusedxml all 0.7.1-2 [43.3 kB] Get: 176 http://deb.debian.org/debian unstable/main amd64 python3-roman all 3.3-3 [9880 B] Get: 177 http://deb.debian.org/debian unstable/main amd64 python3-docutils all 0.21.2+dfsg-2 [403 kB] Get: 178 http://deb.debian.org/debian unstable/main amd64 python3-executing all 2.0.1-0.1 [22.7 kB] Get: 179 http://deb.debian.org/debian unstable/main amd64 python3-fastjsonschema all 2.20.0-1 [21.8 kB] Get: 180 http://deb.debian.org/debian unstable/main amd64 python3-packaging all 24.1-1 [45.8 kB] Get: 181 http://deb.debian.org/debian unstable/main amd64 python3-pathspec all 0.12.1-1 [28.1 kB] Get: 182 http://deb.debian.org/debian unstable/main amd64 python3-pluggy all 1.5.0-1 [26.9 kB] Get: 183 http://deb.debian.org/debian unstable/main amd64 python3-trove-classifiers all 2024.4.10-1 [10.1 kB] Get: 184 http://deb.debian.org/debian unstable/main amd64 python3-hatchling all 1.25.0-1 [53.8 kB] Get: 185 http://deb.debian.org/debian unstable/main amd64 python3-setuptools-scm all 8.1.0-1 [40.5 kB] Get: 186 http://deb.debian.org/debian unstable/main amd64 python3-hatch-vcs all 0.4.0-1 [8336 B] Get: 187 http://deb.debian.org/debian unstable/main amd64 python3-hdmedians amd64 0.14.2-5.1+b1 [118 kB] Get: 188 http://deb.debian.org/debian unstable/main amd64 python3-idna all 3.6-2.1 [38.6 kB] Get: 189 http://deb.debian.org/debian unstable/main amd64 python3-imagesize all 1.4.1-1 [6688 B] Get: 190 http://deb.debian.org/debian unstable/main amd64 python3-iniconfig all 1.1.1-2 [6396 B] Get: 191 http://deb.debian.org/debian unstable/main amd64 python3-parso all 0.8.3-1 [67.4 kB] Get: 192 http://deb.debian.org/debian unstable/main amd64 python3-typeshed all 0.0~git20231111.6764465-3 [1258 kB] Get: 193 http://deb.debian.org/debian unstable/main amd64 python3-jedi all 0.19.1+ds1-1 [691 kB] Get: 194 http://deb.debian.org/debian unstable/main amd64 python3-matplotlib-inline all 0.1.6-2 [8652 B] Get: 195 http://deb.debian.org/debian unstable/main amd64 python3-ptyprocess all 0.7.0-5 [14.7 kB] Get: 196 http://deb.debian.org/debian unstable/main amd64 python3-pexpect all 4.9-2 [55.5 kB] Get: 197 http://deb.debian.org/debian unstable/main amd64 python3-wcwidth all 0.2.13+dfsg1-1 [24.9 kB] Get: 198 http://deb.debian.org/debian unstable/main amd64 python3-prompt-toolkit all 3.0.47-1 [277 kB] Get: 199 http://deb.debian.org/debian unstable/main amd64 python3-pygments all 2.18.0+dfsg-1 [836 kB] Get: 200 http://deb.debian.org/debian unstable/main amd64 python3-pure-eval all 0.2.2-2 [11.0 kB] Get: 201 http://deb.debian.org/debian unstable/main amd64 python3-stack-data all 0.6.3-1 [21.6 kB] Get: 202 http://deb.debian.org/debian unstable/main amd64 python3-ipython all 8.20.0-1 [556 kB] Get: 203 http://deb.debian.org/debian unstable/main amd64 python3-platformdirs all 4.2.2-1 [16.3 kB] Get: 204 http://deb.debian.org/debian unstable/main amd64 python3-jupyter-core all 5.7.2-4 [35.1 kB] Get: 205 http://deb.debian.org/debian unstable/main amd64 python3-psutil amd64 5.9.8-2 [225 kB] Get: 206 http://deb.debian.org/debian unstable/main amd64 python3-tornado amd64 6.4.1-2 [349 kB] Get: 207 http://deb.debian.org/debian unstable/main amd64 python3-py all 1.11.0-2 [88.7 kB] Get: 208 http://deb.debian.org/debian unstable/main amd64 python3-zmq amd64 24.0.1-5+b2 [269 kB] Get: 209 http://deb.debian.org/debian unstable/main amd64 python3-jupyter-client all 8.6.2-3 [91.5 kB] Get: 210 http://deb.debian.org/debian unstable/main amd64 python3-nest-asyncio all 1.5.4-1 [6248 B] Get: 211 http://deb.debian.org/debian unstable/main amd64 python3-ipykernel all 6.29.5-1 [102 kB] Get: 212 http://deb.debian.org/debian unstable/main amd64 python3-ipython-genutils all 0.2.0-6 [21.6 kB] Get: 213 http://deb.debian.org/debian unstable/main amd64 python3-markupsafe amd64 2.1.5-1+b1 [13.6 kB] Get: 214 http://deb.debian.org/debian unstable/main amd64 python3-jinja2 all 3.1.3-1 [119 kB] Get: 215 http://deb.debian.org/debian unstable/main amd64 python3-rpds-py amd64 0.12.0-3+b1 [225 kB] Get: 216 http://deb.debian.org/debian unstable/main amd64 python3-referencing all 0.35.1-1 [23.5 kB] Get: 217 http://deb.debian.org/debian unstable/main amd64 python3-jsonschema-specifications all 2023.12.1-1 [8976 B] Get: 218 http://deb.debian.org/debian unstable/main amd64 python3-jsonschema all 4.19.2-3 [71.3 kB] Get: 219 http://deb.debian.org/debian unstable/main amd64 python3-jupyterlab-pygments all 0.2.2-3 [6096 B] Get: 220 http://deb.debian.org/debian unstable/main amd64 python3-mistune all 3.0.2-1 [33.1 kB] Get: 221 http://deb.debian.org/debian unstable/main amd64 python3-natsort all 8.0.2-2 [39.0 kB] Get: 222 http://deb.debian.org/debian unstable/main amd64 python3-nbformat all 5.9.1-1 [45.1 kB] Get: 223 http://deb.debian.org/debian unstable/main amd64 python3-nbclient all 0.8.0-1 [64.0 kB] Get: 224 http://deb.debian.org/debian unstable/main amd64 python3-pandocfilters all 1.5.1-1 [23.7 kB] Get: 225 http://deb.debian.org/debian unstable/main amd64 python3-tinycss2 all 1.3.0-1 [22.1 kB] Get: 226 http://deb.debian.org/debian unstable/main amd64 python3-nbconvert all 7.16.4-1 [175 kB] Get: 227 http://deb.debian.org/debian unstable/main amd64 python3-terminado all 0.18.1-1 [17.3 kB] Get: 228 http://deb.debian.org/debian unstable/main amd64 python3-prometheus-client all 0.19.0+ds1-1 [35.0 kB] Get: 229 http://deb.debian.org/debian unstable/main amd64 python3-send2trash all 1.8.2-1 [16.5 kB] Get: 230 http://deb.debian.org/debian unstable/main amd64 python3-notebook all 6.4.12-2.2 [1406 kB] Get: 231 http://deb.debian.org/debian unstable/main amd64 sphinx-common all 7.4.7-2 [731 kB] Get: 232 http://deb.debian.org/debian unstable/main amd64 python3-urllib3 all 2.0.7-2 [111 kB] Get: 233 http://deb.debian.org/debian unstable/main amd64 python3-requests all 2.32.3+dfsg-1 [71.9 kB] Get: 234 http://deb.debian.org/debian unstable/main amd64 python3-snowballstemmer all 2.2.0-4 [58.0 kB] Get: 235 http://deb.debian.org/debian unstable/main amd64 python3-sphinx all 7.4.7-2 [588 kB] Get: 236 http://deb.debian.org/debian unstable/main amd64 python3-tabulate all 0.9.0-1 [45.9 kB] Get: 237 http://deb.debian.org/debian unstable/main amd64 python3-numpydoc all 1.6.0-2 [49.6 kB] Get: 238 http://deb.debian.org/debian unstable/main amd64 python3-patsy all 0.5.6-1 [173 kB] Get: 239 http://deb.debian.org/debian unstable/main amd64 python3-pytest all 8.3.2-1 [249 kB] Get: 240 http://deb.debian.org/debian unstable/main amd64 python3-statsmodels-lib amd64 0.14.2+dfsg-1+b1 [1466 kB] Get: 241 http://deb.debian.org/debian unstable/main amd64 python3-statsmodels all 0.14.2+dfsg-1 [4826 kB] Get: 242 http://deb.debian.org/debian unstable/main amd64 python3-skbio amd64 0.6.2-1 [1333 kB] Get: 243 http://deb.debian.org/debian unstable/main amd64 python3-sphinx-bootstrap-theme all 0.8.1-5 [422 kB] Fetched 127 MB in 2s (65.5 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. 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Setting up file (1:5.45-3) ... Setting up libjs-requirejs (2.3.7+ds+~2.1.37-1) ... Setting up libjs-es6-promise (4.2.8-12) ... Setting up libjs-text-encoding (0.7.0-5) ... Setting up libaec0:amd64 (1.1.3-1) ... Setting up libsource-highlight-common (3.1.9-4.3) ... Setting up libelf1t64:amd64 (0.191-2) ... Setting up python-babel-localedata (2.14.0-1) ... Setting up libkrb5support0:amd64 (1.21.3-3) ... Setting up libdw1t64:amd64 (0.191-2) ... Setting up libsasl2-modules-db:amd64 (2.1.28+dfsg1-7) ... Setting up tzdata (2024a-4) ... Current default time zone: 'Etc/UTC' Local time is now: Thu Sep 25 00:49:15 UTC 2025. Universal Time is now: Thu Sep 25 00:49:15 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libpgm-5.3-0t64:amd64 (5.3.128~dfsg-2.1) ... Setting up autotools-dev (20220109.1) ... Setting up libglib2.0-0t64:amd64 (2.81.2-1) ... No schema files found: doing nothing. Setting up libblas3:amd64 (3.12.0-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up node-jed (1.1.1-4) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b4) ... Setting up libjs-xterm (5.3.0-3) ... Setting up liblzf1:amd64 (3.6-4+b1) ... Setting up libjs-codemirror (5.65.0+~cs5.83.9-3) ... Setting up libcares2:amd64 (1.33.0-1) ... Setting up autopoint (0.22.5-2) ... Setting up libjs-jed (1.1.1-4) ... Setting up libipt2 (2.0.6-1) ... Setting up libk5crypto3:amd64 (1.21.3-3) ... Setting up libjs-prototype (1.7.3-1) ... Setting up libbabeltrace1:amd64 (1.5.11-3+b7) ... Setting up libsasl2-2:amd64 (2.1.28+dfsg1-7) ... Setting up libgfortran5:amd64 (14.2.0-3) ... Setting up autoconf (2.72-3) ... Setting up libnghttp3-9:amd64 (1.4.0-1) ... Setting up node-undici (5.28.4+dfsg1+~cs23.12.11-2) ... Setting up dwz (0.15-1+b1) ... 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Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up liblapack3:amd64 (3.12.0-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up gettext (0.22.5-2) ... Setting up libtool (2.4.7-7) ... Setting up libjs-bootstrap-tour (0.12.0+dfsg-5) ... Setting up libjs-backbone (1.4.1~dfsg+~1.4.15-3) ... Setting up libsource-highlight4t64:amd64 (3.1.9-4.3) ... Setting up libldap-2.5-0:amd64 (2.5.18+dfsg-3) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... Setting up libgssapi-krb5-2:amd64 (1.21.3-3) ... Setting up ucf (3.0043+nmu1) ... Setting up libjs-sphinxdoc (7.4.7-2) ... Setting up libreadline8t64:amd64 (8.2-5) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-5) ... Setting up xml-core (0.19) ... Setting up liblbfgsb0:amd64 (3.0+dfsg.4-1+b1) ... Setting up libzmq5:amd64 (4.3.5-1+b2) ... Setting up libdebuginfod-common (0.191-2) ... Setting up libcurl4t64:amd64 (8.9.1-2) ... Setting up libtirpc3t64:amd64 (1.3.4+ds-1.3) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libcurl3t64-gnutls:amd64 (8.9.1-2) ... Setting up man-db (2.12.1-3) ... Not building database; man-db/auto-update is not 'true'. Setting up sphinx-common (7.4.7-2) ... Setting up libnsl2:amd64 (1.3.0-3+b2) ... Setting up libhdf5-103-1t64:amd64 (1.10.10+repack-4) ... Setting up libhdf5-hl-100t64:amd64 (1.10.10+repack-4) ... Setting up libdebuginfod1t64:amd64 (0.191-2) ... Setting up libpython3.12-stdlib:amd64 (3.12.5-3) ... Setting up python3.12 (3.12.5-3) ... 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Setting up python3-comm (0.2.1-1) ... Setting up python3-inflect (7.3.1-1) ... Setting up python3-prometheus-client (0.19.0+ds1-1) ... Setting up python3-executing (2.0.1-0.1) ... Setting up python3-pexpect (4.9-2) ... Setting up python3-terminado (0.18.1-1) ... Setting up python3-argon2 (21.1.0-2) ... Setting up python3-hatchling (1.25.0-1) ... Setting up python3-stack-data (0.6.3-1) ... Setting up python3-referencing (0.35.1-1) ... Setting up python3-pkg-resources (73.0.0-1) ... Setting up python3-setuptools (73.0.0-1) ... Setting up python3-py (1.11.0-2) ... Setting up python3-jedi (0.19.1+ds1-1) ... Setting up python3-babel (2.14.0-1) ... update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode Setting up python3-coverage (7.6.0+dfsg1-1) ... Setting up python3-debugpy (1.8.2+ds-5) ... Setting up python3-setuptools-scm (8.1.0-1) ... Setting up python3-pygments (2.18.0+dfsg-1) ... Setting up python3-chardet (5.2.0+dfsg-1) ... Setting up python3-ipython (8.20.0-1) ... Setting up python3-zmq (24.0.1-5+b2) ... Setting up python3-requests (2.32.3+dfsg-1) ... Setting up python3-numpy (1:1.26.4+ds-11) ... Setting up python3-hdmedians (0.14.2-5.1+b1) ... Setting up python3-jupyter-client (8.6.2-3) ... Setting up python3-statsmodels-lib:amd64 (0.14.2+dfsg-1+b1) ... Setting up python3-hatch-vcs (0.4.0-1) ... Setting up dh-python (6.20240603) ... Setting up python3-scipy (1.13.1-3) ... Setting up python3-pandas-lib:amd64 (2.2.2+dfsg-4+b1) ... Setting up python3-h5py-serial (3.11.0-5) ... Setting up python3-jupyterlab-pygments (0.2.2-3) ... Setting up python3-patsy (0.5.6-1) ... Setting up python3-pandas (2.2.2+dfsg-4) ... Setting up python3-ipykernel (6.29.5-1) ... Setting up python3-h5py (3.11.0-5) ... Setting up python3-statsmodels (0.14.2+dfsg-1) ... Setting up python3-jsonschema-specifications (2023.12.1-1) ... Setting up python3-biom-format (2.1.16-1+b1) ... Setting up python3-jsonschema (4.19.2-3) ... Setting up python3-skbio (0.6.2-1) ... Setting up python3-nbformat (5.9.1-1) ... Setting up python3-nbclient (0.8.0-1) ... Setting up python3-nbconvert (7.16.4-1) ... Setting up python3-notebook (6.4.12-2.2) ... Setting up libnode115:amd64 (20.16.0+dfsg-1) ... Setting up nodejs (20.16.0+dfsg-1) ... update-alternatives: using /usr/bin/nodejs to provide /usr/bin/js (js) in auto mode Setting up node-acorn (8.8.1+ds+~cs25.17.7-2) ... Setting up node-jsdoc2 (2.4.0-3) ... Processing triggers for libc-bin (2.39-7) ... Processing triggers for sgml-base (1.31) ... Setting up docutils-common (0.21.2+dfsg-2) ... Processing triggers for sgml-base (1.31) ... Setting up python3-docutils (0.21.2+dfsg-2) ... Setting up python3-sphinx (7.4.7-2) ... Setting up python3-numpydoc (1.6.0-2) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/emperor-1.0.3+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../emperor_1.0.3+ds-9.1_source.changes dpkg-buildpackage: info: source package emperor dpkg-buildpackage: info: source version 1.0.3+ds-9.1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Bastian Germann dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 dpkg-source: info: using options from emperor-1.0.3+ds/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/ debian/rules clean dh clean --with sphinxdoc --buildsystem=pybuild debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/emperor-1.0.3+ds' dh_auto_clean pybuild --clean -i python{version} -p 3.12 I: pybuild base:311: python3.12 setup.py clean running clean removing '/build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-3.12' does not exist -- can't clean it rm -rf .pybuild/ find . -name \*.pyc -exec rm {} \; cd /build/reproducible-path/emperor-1.0.3+ds/doc && make clean make[2]: Entering directory '/build/reproducible-path/emperor-1.0.3+ds/doc' rm -rf build/* rm -rf source/scripts/* rm -rf source/generated rm -rf doc/build/jsdoc/* make[2]: Leaving directory '/build/reproducible-path/emperor-1.0.3+ds/doc' rm -fr tests/javascript_tests/qunit # since packaging seems problematic rm -rf debian/python3-emperor-doc debian/python3-emperor-doc.substvars make[1]: Leaving directory '/build/reproducible-path/emperor-1.0.3+ds' dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/python3-emperor.substvars debian/python3-emperor-doc.substvars debian/files rm -fr -- debian/python3-emperor/ debian/tmp/ debian/python3-emperor-doc/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \) debian/rules binary dh binary --with sphinxdoc --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild pybuild --configure -i python{version} -p 3.12 I: pybuild base:311: python3.12 setup.py config running config dh_auto_build -O--buildsystem=pybuild pybuild --build -i python{version} -p 3.12 I: pybuild base:311: /usr/bin/python3 setup.py build running build running build_py creating /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor copying emperor/_pandas.py -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor copying emperor/util.py -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor copying emperor/core.py -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor copying emperor/_format_strings.py -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor copying emperor/format.py -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor copying emperor/__init__.py -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor creating /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/tests copying tests/_test_core_strings.py -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/tests copying tests/all_tests.py -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/tests copying tests/test_pandas.py -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/tests copying tests/test_format.py -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/tests copying tests/test_util.py -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/tests copying tests/__init__.py -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/tests copying tests/_test_format_strings.py -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/tests copying tests/test_core.py -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/tests creating /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/qiime_backports copying emperor/qiime_backports/make_3d_plots.py -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/qiime_backports copying emperor/qiime_backports/util.py -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/qiime_backports copying emperor/qiime_backports/__init__.py -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/qiime_backports creating /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files creating /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/vendor creating /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/vendor/css copying emperor/support_files/vendor/css/spectrum.min.css -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/vendor/css copying emperor/support_files/vendor/css/chosen.min.css -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/vendor/css copying emperor/support_files/vendor/css/jquery.contextMenu.min.css -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/vendor/css copying emperor/support_files/vendor/css/slick.grid.min.css -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/vendor/css copying emperor/support_files/vendor/css/chosen-sprite.png -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/vendor/css copying emperor/support_files/vendor/css/chosen-sprite@2x.png -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/vendor/css creating /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/vendor/css/images copying emperor/support_files/vendor/css/images/ui-bg_glass_55_fbf9ee_1x400.png -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/vendor/css/images copying emperor/support_files/vendor/css/images/ui-icons_222222_256x240.png -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/vendor/css/images copying emperor/support_files/vendor/css/images/ui-bg_glass_75_e6e6e6_1x400.png -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/vendor/css/images copying emperor/support_files/vendor/css/images/ui-bg_glass_75_dadada_1x400.png -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/vendor/css/images copying emperor/support_files/vendor/css/images/ui-icons_cd0a0a_256x240.png -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/vendor/css/images copying emperor/support_files/vendor/css/images/ui-icons_454545_256x240.png -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/vendor/css/images copying emperor/support_files/vendor/css/images/ui-bg_glass_65_ffffff_1x400.png -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/vendor/css/images copying emperor/support_files/vendor/css/images/ui-icons_2e83ff_256x240.png -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/vendor/css/images copying emperor/support_files/vendor/css/images/ui-bg_highlight-soft_75_ffe45c_1x100.png -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/vendor/css/images copying emperor/support_files/vendor/css/images/ui-bg_glass_95_fef1ec_1x400.png -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/vendor/css/images copying emperor/support_files/vendor/css/images/ui-bg_highlight-soft_75_cccccc_1x100.png -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/vendor/css/images copying emperor/support_files/vendor/css/images/ui-icons_888888_256x240.png -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/vendor/css/images creating /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/vendor/css/font copying emperor/support_files/vendor/css/font/context-menu-icons.eot -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/vendor/css/font copying emperor/support_files/vendor/css/font/context-menu-icons.ttf -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/vendor/css/font copying emperor/support_files/vendor/css/font/context-menu-icons.woff -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/vendor/css/font copying emperor/support_files/vendor/css/font/context-menu-icons.woff2 -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/vendor/css/font creating /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/img copying emperor/support_files/img/play.png -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/img copying emperor/support_files/img/reset.png -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/img copying emperor/support_files/img/emperor.png -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/img copying emperor/support_files/img/pause.png -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/img copying emperor/support_files/img/favicon.ico -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/img creating /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/css copying emperor/support_files/css/emperor.css -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/css creating /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/js copying emperor/support_files/js/view.js -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/js copying emperor/support_files/js/animations-controller.js -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/js copying emperor/support_files/js/trajectory.js -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/js copying emperor/support_files/js/util.js -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/js copying emperor/support_files/js/sceneplotview3d.js -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/js copying emperor/support_files/js/opacity-view-controller.js -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/js copying emperor/support_files/js/multi-model.js -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/js copying emperor/support_files/js/abc-view-controller.js -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/js copying emperor/support_files/js/scale-editor.js -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/js copying emperor/support_files/js/ui-state.js -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/js copying emperor/support_files/js/model.js -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/js copying emperor/support_files/js/shape-controller.js -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/js copying emperor/support_files/js/view-controller.js -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/js copying emperor/support_files/js/axes-controller.js -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/js copying emperor/support_files/js/draw.js -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/js copying emperor/support_files/js/animate.js -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/js copying emperor/support_files/js/controller.js -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/js copying emperor/support_files/js/scale-view-controller.js -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/js copying emperor/support_files/js/shapes.js -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/js copying emperor/support_files/js/color-editor.js -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/js copying emperor/support_files/js/color-view-controller.js -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/js copying emperor/support_files/js/visibility-controller.js -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/js copying emperor/support_files/js/shape-editor.js -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/js creating /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/templates copying emperor/support_files/templates/logic-template.html -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/templates copying emperor/support_files/templates/jupyter-template.html -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/templates copying emperor/support_files/templates/style-template.html -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/templates copying emperor/support_files/templates/base-dependencies.html -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/templates copying emperor/support_files/templates/standalone-template.html -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/templates copying emperor/support_files/templates/html-container-template.html -> /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/templates I: pybuild pybuild:334: python3.12 setup.py develop --install-dir /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build; export PYTHONPATH=/build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build:; /usr/bin/make -C doc html; cp -rv /build/reproducible-path/emperor-1.0.3+ds/tests/test_data /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/tests running develop /usr/lib/python3/dist-packages/setuptools/command/develop.py:41: EasyInstallDeprecationWarning: easy_install command is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` and ``easy_install``. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://github.com/pypa/setuptools/issues/917 for details. ******************************************************************************** !! easy_install.initialize_options(self) /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running egg_info creating emperor.egg-info writing emperor.egg-info/PKG-INFO writing dependency_links to emperor.egg-info/dependency_links.txt writing requirements to emperor.egg-info/requires.txt writing top-level names to emperor.egg-info/top_level.txt writing manifest file 'emperor.egg-info/SOURCES.txt' reading manifest file 'emperor.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no directories found matching 'scripts' warning: no previously-included files matching '*.pyc' found anywhere in distribution warning: no previously-included files matching '*.pyo' found anywhere in distribution warning: no previously-included files matching '.git' found anywhere in distribution warning: no previously-included files matching '*~' found anywhere in distribution adding license file 'LICENSE.md' writing manifest file 'emperor.egg-info/SOURCES.txt' running build_ext Creating /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor.egg-link (link to .) Adding emperor 1.0.3 to easy-install.pth file Installed /build/reproducible-path/emperor-1.0.3+ds Processing dependencies for emperor==1.0.3 Searching for scipy==1.13.1 Best match: scipy 1.13.1 Adding scipy 1.13.1 to easy-install.pth file Using /usr/lib/python3/dist-packages Searching for scikit-bio==0.6.2 Best match: scikit-bio 0.6.2 Adding scikit-bio 0.6.2 to easy-install.pth file Using /usr/lib/python3/dist-packages Searching for pandas==2.2.2+dfsg Best match: pandas 2.2.2+dfsg Adding pandas 2.2.2+dfsg to easy-install.pth file Using /usr/lib/python3/dist-packages Searching for numpy==1.26.4 Best match: numpy 1.26.4 Adding numpy 1.26.4 to easy-install.pth file Installing f2py script to /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build Installing f2py3 script to /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build Installing f2py3.12 script to /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build Using /usr/lib/python3/dist-packages Searching for Jinja2==3.1.3 Best match: Jinja2 3.1.3 Adding Jinja2 3.1.3 to easy-install.pth file Using /usr/lib/python3/dist-packages Searching for click==8.1.7 Best match: click 8.1.7 Adding click 8.1.7 to easy-install.pth file Using /usr/lib/python3/dist-packages Finished processing dependencies for emperor==1.0.3 make[1]: Entering directory '/build/reproducible-path/emperor-1.0.3+ds/doc' jsdoc2 ../emperor/support_files/js/ -d=build/jsdoc -c=jsdoc-config.json >> WARNING: Trying to document EmperorViewControllerABC#setEnabled without first documenting EmperorViewControllerABC. >> WARNING: Trying to document EmperorViewControllerABC#setActive without first documenting EmperorViewControllerABC. >> WARNING: Trying to document AnimationDirector#initializeTrajectories without first documenting AnimationDirector. >> WARNING: Trying to document AnimationDirector#initializeTrajectories without first documenting AnimationDirector. >> WARNING: Trying to document AnimationDirector#initializeTrajectories without first documenting AnimationDirector. >> WARNING: Trying to document AnimationDirector#initializeTrajectories without first documenting AnimationDirector. >> WARNING: Trying to document AnimationDirector#initializeTrajectories without first documenting AnimationDirector. >> WARNING: Trying to document AnimationDirector#_computeN without first documenting AnimationDirector. >> WARNING: Trying to document AnimationDirector#updateFrame without first documenting AnimationDirector. >> WARNING: Trying to document AnimationDirector#updateFrame without first documenting AnimationDirector. >> WARNING: Trying to document AnimationsController#setColors without first documenting AnimationsController. >> WARNING: Trying to document AnimationsController#_buildGrid without first documenting AnimationsController. >> WARNING: Trying to document AnimationsController#_rewindButtonClicked without first documenting AnimationsController. >> WARNING: Trying to document AnimationsController#_rewindButtonClicked without first documenting AnimationsController. >> WARNING: Trying to document AnimationsController#_pauseButtonClicked without first documenting AnimationsController. >> WARNING: Trying to document AnimationsController#_playButtonClicked without first documenting AnimationsController. >> WARNING: Trying to document AnimationsController#_playButtonClicked without first documenting AnimationsController. >> WARNING: Trying to document AnimationsController#_playButtonClicked without first documenting AnimationsController. >> WARNING: Trying to document AnimationsController#_playButtonClicked without first documenting AnimationsController. >> WARNING: Trying to document AnimationsController#drawFrame without first documenting AnimationsController. >> WARNING: Trying to document AnimationsController#drawFrame without first documenting AnimationsController. >> WARNING: Trying to document AxesController#buildDisplayTable without first documenting AxesController. >> WARNING: Trying to document AxesController#_buildScreePlot without first documenting AxesController. >> WARNING: Trying to document EmperorController#resize without first documenting EmperorController. >> WARNING: Trying to document EmperorController#resize without first documenting EmperorController. >> WARNING: Trying to document EmperorController#_buildUI without first documenting EmperorController. >> WARNING: Trying to document EmperorController#loadConfig without first documenting EmperorController. >> WARNING: Trying to document EmperorArrowHelper#dispose without first documenting EmperorArrowHelper. >> WARNING: Trying to document EmperorArrowHelper#dispose without first documenting EmperorArrowHelper. >> WARNING: Trying to document EmperorArrowHelper#dispose without first documenting EmperorArrowHelper. >> WARNING: Trying to document DecompositionModel#_fixAxesNames without first documenting DecompositionModel. >> WARNING: Trying to document DecompositionModel#_fixAxesNames without first documenting DecompositionModel. >> WARNING: Trying to document DecompositionModel#_buildAxesLabels without first documenting DecompositionModel. >> WARNING: Trying to document MultiModel#_unionRanges without first documenting MultiModel. >> WARNING: Trying to document MultiModel#_unionRanges without first documenting MultiModel. >> WARNING: Trying to document MultiModel#_unionRanges without first documenting MultiModel. >> WARNING: Trying to document MultiModel#_unionRanges without first documenting MultiModel. >> WARNING: Trying to document ScenePlotView3D#addDecompositionsToScene without first documenting ScenePlotView3D. >> WARNING: Trying to document ScenePlotView3D#_dimensionsIterator without first documenting ScenePlotView3D. >> WARNING: Trying to document ScenePlotView3D#_dimensionsIterator without first documenting ScenePlotView3D. >> WARNING: Trying to document ScenePlotView3D#resize without first documenting ScenePlotView3D. >> WARNING: Trying to document ScenePlotView3D#resize without first documenting ScenePlotView3D. >> WARNING: Trying to document ScenePlotView3D#resize without first documenting ScenePlotView3D. >> WARNING: Trying to document ScenePlotView3D#resize without first documenting ScenePlotView3D. >> WARNING: Trying to document ScenePlotView3D#resize without first documenting ScenePlotView3D. >> WARNING: Trying to document ScenePlotView3D#updateCameraAspectRatio without first documenting ScenePlotView3D. >> WARNING: Trying to document ScenePlotView3D#updateCameraAspectRatio without first documenting ScenePlotView3D. >> WARNING: Trying to document ScenePlotView3D#updateCameraAspectRatio without first documenting ScenePlotView3D. >> WARNING: Trying to document ScenePlotView3D#updateCameraAspectRatio without first documenting ScenePlotView3D. >> WARNING: Trying to document ScenePlotView3D#updateCameraAspectRatio without first documenting ScenePlotView3D. >> WARNING: Trying to document ScenePlotView3D#updateCameraAspectRatio without first documenting ScenePlotView3D. >> WARNING: Trying to document ScenePlotView3D#updateCameraAspectRatio without first documenting ScenePlotView3D. >> WARNING: Trying to document ScenePlotView3D#updateCameraAspectRatio without first documenting ScenePlotView3D. >> WARNING: Trying to document ScenePlotView3D#updateCameraAspectRatio without first documenting ScenePlotView3D. >> WARNING: Trying to document ScenePlotView3D#updateCameraTarget without first documenting ScenePlotView3D. >> WARNING: Trying to document ScenePlotView3D#updateCameraTarget without first documenting ScenePlotView3D. >> WARNING: Trying to document ScenePlotView3D#checkUpdate without first documenting ScenePlotView3D. >> WARNING: Trying to document ScenePlotView3D#checkUpdate without first documenting ScenePlotView3D. >> WARNING: Trying to document ScenePlotView3D#checkUpdate without first documenting ScenePlotView3D. >> WARNING: Trying to document ScenePlotView3D#checkUpdate without first documenting ScenePlotView3D. >> WARNING: Trying to document ScenePlotView3D#render without first documenting ScenePlotView3D. >> WARNING: Trying to document ScenePlotView3D#_selectCallback without first documenting ScenePlotView3D. >> WARNING: Trying to document ScenePlotView3D#_eventCallback without first documenting ScenePlotView3D. >> WARNING: Trying to document ScenePlotView3D#_eventCallback without first documenting ScenePlotView3D. >> WARNING: Trying to document ScenePlotView3D#_eventCallback without first documenting ScenePlotView3D. >> WARNING: Trying to document ScenePlotView3D#recenterCamera without first documenting ScenePlotView3D. >> WARNING: Trying to document TrajectoryOfSamples#_generateInterpolatedCoordinates without first documenting TrajectoryOfSamples. >> WARNING: Trying to document TrajectoryOfSamples#_generateInterpolatedCoordinates without first documenting TrajectoryOfSamples. >> WARNING: Trying to document EmperorAttributeABC#_buildGrid without first documenting EmperorAttributeABC. >> WARNING: Trying to document DecompositionView#_initGeometry without first documenting DecompositionView. >> WARNING: Trying to document DecompositionView#_initGeometry without first documenting DecompositionView. >> WARNING: Trying to document DecompositionView#_initGeometry without first documenting DecompositionView. >> WARNING: Trying to document DecompositionView#_initGeometry without first documenting DecompositionView. >> WARNING: Trying to document DecompositionView#_initGeometry without first documenting DecompositionView. >> WARNING: Trying to document DecompositionView#_initBaseView without first documenting DecompositionView. >> WARNING: Trying to document DecompositionView#_initBaseView without first documenting DecompositionView. >> WARNING: Trying to document DecompositionView#updatePositions without first documenting DecompositionView. >> WARNING: Trying to document DecompositionView#_redrawEdges without first documenting DecompositionView. >> WARNING: Trying to document DecompositionView#_redrawEdges without first documenting DecompositionView. >> WARNING: Trying to document DecompositionView#_redrawEdges without first documenting DecompositionView. >> WARNING: Trying to document DecompositionView#setCategory without first documenting DecompositionView. >> WARNING: Trying to document DecompositionView#hideEdgesForPlottables without first documenting DecompositionView. >> WARNING: Trying to document DecompositionView#hideEdgesForPlottables without first documenting DecompositionView. >> WARNING: Trying to document DecompositionView#setColor without first documenting DecompositionView. >> WARNING: Trying to document DecompositionView#setVisibility without first documenting DecompositionView. >> WARNING: Trying to document DecompositionView#setScale without first documenting DecompositionView. >> WARNING: Trying to document DecompositionView#setOpacity without first documenting DecompositionView. >> WARNING: Trying to document DecompositionView#toggleLabelVisibility without first documenting DecompositionView. >> WARNING: Trying to document DecompositionView#setEmissive without first documenting DecompositionView. >> WARNING: Trying to document DecompositionView#getAndClearOldMarkers without first documenting DecompositionView. >> WARNING: Trying to document DecompositionView#getAndClearOldMarkers without first documenting DecompositionView. >> WARNING: Trying to document setEnabled as a member of undocumented symbol EmperorViewControllerABC. >> WARNING: Trying to document setActive as a member of undocumented symbol EmperorViewControllerABC. >> WARNING: Trying to document resize as a member of undocumented symbol EmperorViewControllerABC. >> WARNING: Trying to document toJSON as a member of undocumented symbol EmperorViewControllerABC. >> WARNING: Trying to document fromJSON as a member of undocumented symbol EmperorViewControllerABC. >> WARNING: Trying to document forceRefresh as a member of undocumented symbol EmperorViewControllerABC. >> WARNING: Trying to document initializeTrajectories as a member of undocumented symbol AnimationDirector. >> WARNING: Trying to document currentFrameIsGradientPoint as a member of undocumented symbol AnimationDirector. >> WARNING: Trying to document getMaximumTrajectoryLength as a member of undocumented symbol AnimationDirector. >> WARNING: Trying to document updateFrame as a member of undocumented symbol AnimationDirector. >> WARNING: Trying to document animationCycleFinished as a member of undocumented symbol AnimationDirector. >> WARNING: Trying to document getColors as a member of undocumented symbol AnimationsController. >> WARNING: Trying to document setColors as a member of undocumented symbol AnimationsController. >> WARNING: Trying to document setEnabled as a member of undocumented symbol AnimationsController. >> WARNING: Trying to document resize as a member of undocumented symbol AnimationsController. >> WARNING: Trying to document drawFrame as a member of undocumented symbol AnimationsController. >> WARNING: Trying to document setGradientCategory as a member of undocumented symbol AnimationsController. >> WARNING: Trying to document getGradientCategory as a member of undocumented symbol AnimationsController. >> WARNING: Trying to document setTrajectoryCategory as a member of undocumented symbol AnimationsController. >> WARNING: Trying to document getTrajectoryCategory as a member of undocumented symbol AnimationsController. >> WARNING: Trying to document setSpeed as a member of undocumented symbol AnimationsController. >> WARNING: Trying to document getSpeed as a member of undocumented symbol AnimationsController. >> WARNING: Trying to document setRadius as a member of undocumented symbol AnimationsController. >> WARNING: Trying to document getRadius as a member of undocumented symbol AnimationsController. >> WARNING: Trying to document toJSON as a member of undocumented symbol AnimationsController. >> WARNING: Trying to document fromJSON as a member of undocumented symbol AnimationsController. >> WARNING: Trying to document buildDisplayTable as a member of undocumented symbol AxesController. >> WARNING: Trying to document getReferenceEdgeColor as a member of undocumented symbol AxesController. >> WARNING: Trying to document getOtherEdgeColor as a member of undocumented symbol AxesController. >> WARNING: Trying to document getBackgroundColor as a member of undocumented symbol AxesController. >> WARNING: Trying to document getAxesColor as a member of undocumented symbol AxesController. >> WARNING: Trying to document setReferenceEdgeColor as a member of undocumented symbol AxesController. >> WARNING: Trying to document setOtherEdgeColor as a member of undocumented symbol AxesController. >> WARNING: Trying to document setBackgroundColor as a member of undocumented symbol AxesController. >> WARNING: Trying to document setAxesColor as a member of undocumented symbol AxesController. >> WARNING: Trying to document updateVisibleAxes as a member of undocumented symbol AxesController. >> WARNING: Trying to document flipAxis as a member of undocumented symbol AxesController. >> WARNING: Trying to document toJSON as a member of undocumented symbol AxesController. >> WARNING: Trying to document fromJSON as a member of undocumented symbol AxesController. >> WARNING: Trying to document setEnabled as a member of undocumented symbol ColorViewController. >> WARNING: Trying to document isColoringContinuous as a member of undocumented symbol ColorViewController. >> WARNING: Trying to document getColorList as a member of undocumented symbol ColorViewController. >> WARNING: Trying to document getDiscreteColors as a member of undocumented symbol ColorViewController. >> WARNING: Trying to document getPaletteColor as a member of undocumented symbol ColorViewController. >> WARNING: Trying to document getScaledColors as a member of undocumented symbol ColorViewController. >> WARNING: Trying to document getInterpolatedColors as a member of undocumented symbol ColorViewController. >> WARNING: Trying to document toJSON as a member of undocumented symbol ColorViewController. >> WARNING: Trying to document fromJSON as a member of undocumented symbol ColorViewController. >> WARNING: Trying to document resize as a member of undocumented symbol ColorViewController. >> WARNING: Trying to document setPlottableAttributes as a member of undocumented symbol ColorViewController. >> WARNING: Trying to document Colormaps as a member of undocumented symbol ColorViewController. >> WARNING: Trying to document addDecompositionView as a member of undocumented symbol EmperorController. >> WARNING: Trying to document addSceneView as a member of undocumented symbol EmperorController. >> WARNING: Trying to document resize as a member of undocumented symbol EmperorController. >> WARNING: Trying to document render as a member of undocumented symbol EmperorController. >> WARNING: Trying to document updatePlotBanner as a member of undocumented symbol EmperorController. >> WARNING: Trying to document screenshot as a member of undocumented symbol EmperorController. >> WARNING: Trying to document saveConfig as a member of undocumented symbol EmperorController. >> WARNING: Trying to document loadConfig as a member of undocumented symbol EmperorController. >> WARNING: Trying to document addTab as a member of undocumented symbol EmperorController. >> WARNING: Trying to document exportToVega as a member of undocumented symbol EmperorController. >> WARNING: Trying to document EmperorTrajectory as a member of undocumented symbol THREE. >> WARNING: Trying to document raycast as a member of undocumented symbol EmperorArrowHelper. >> WARNING: Trying to document setColor as a member of undocumented symbol EmperorArrowHelper. >> WARNING: Trying to document setPointsTo as a member of undocumented symbol EmperorArrowHelper. >> WARNING: Trying to document dispose as a member of undocumented symbol EmperorArrowHelper. >> WARNING: Trying to document setLineAtIndex as a member of undocumented symbol EmperorLineSegments. >> WARNING: Trying to document toString as a member of undocumented symbol Plottable. >> WARNING: Trying to document hasConfidenceIntervals as a member of undocumented symbol DecompositionModel. >> WARNING: Trying to document getPlottableByID as a member of undocumented symbol DecompositionModel. >> WARNING: Trying to document getPlottableByIDs as a member of undocumented symbol DecompositionModel. >> WARNING: Trying to document getPlottablesByMetadataCategoryValue as a member of undocumented symbol DecompositionModel. >> WARNING: Trying to document getUniqueValuesByCategory as a member of undocumented symbol DecompositionModel. >> WARNING: Trying to document isArrowType as a member of undocumented symbol DecompositionModel. >> WARNING: Trying to document isScatterType as a member of undocumented symbol DecompositionModel. >> WARNING: Trying to document apply as a member of undocumented symbol DecompositionModel. >> WARNING: Trying to document toString as a member of undocumented symbol DecompositionModel. >> WARNING: Trying to document setPlottableAttributes as a member of undocumented symbol OpacityViewController. >> WARNING: Trying to document setAllPlottableAttributes as a member of undocumented symbol OpacityViewController. >> WARNING: Trying to document scaleValue as a member of undocumented symbol OpacityViewController. >> WARNING: Trying to document setPlottableAttributes as a member of undocumented symbol ScaleViewController. >> WARNING: Trying to document setAllPlottableAttributes as a member of undocumented symbol ScaleViewController. >> WARNING: Trying to document scaleValue as a member of undocumented symbol ScaleViewController. >> WARNING: Trying to document buildCamera as a member of undocumented symbol ScenePlotView3D. >> WARNING: Trying to document buildCamController as a member of undocumented symbol ScenePlotView3D. >> WARNING: Trying to document addDecompositionsToScene as a member of undocumented symbol ScenePlotView3D. >> WARNING: Trying to document getScalingConstant as a member of undocumented symbol ScenePlotView3D. >> WARNING: Trying to document drawAxesWithColor as a member of undocumented symbol ScenePlotView3D. >> WARNING: Trying to document drawAxesLabelsWithColor as a member of undocumented symbol ScenePlotView3D. >> WARNING: Trying to document removeAxes as a member of undocumented symbol ScenePlotView3D. >> WARNING: Trying to document removeAxesLabels as a member of undocumented symbol ScenePlotView3D. >> WARNING: Trying to document resize as a member of undocumented symbol ScenePlotView3D. >> WARNING: Trying to document updateCameraAspectRatio as a member of undocumented symbol ScenePlotView3D. >> WARNING: Trying to document updateCameraTarget as a member of undocumented symbol ScenePlotView3D. >> WARNING: Trying to document checkUpdate as a member of undocumented symbol ScenePlotView3D. >> WARNING: Trying to document render as a member of undocumented symbol ScenePlotView3D. >> WARNING: Trying to document on as a member of undocumented symbol ScenePlotView3D. >> WARNING: Trying to document off as a member of undocumented symbol ScenePlotView3D. >> WARNING: Trying to document recenterCamera as a member of undocumented symbol ScenePlotView3D. >> WARNING: Trying to document setPlottableAttributes as a member of undocumented symbol ShapeController. >> WARNING: Trying to document calculateNumberOfPointsForDelta as a member of undocumented symbol TrajectoryOfSamples. >> WARNING: Trying to document representativeCoordinatesAtIndex as a member of undocumented symbol TrajectoryOfSamples. >> WARNING: Trying to document representativeInterpolatedCoordinatesAtIndex as a member of undocumented symbol TrajectoryOfSamples. >> WARNING: Trying to document getProperty as a member of undocumented symbol UIState. >> WARNING: Trying to document registerProperty as a member of undocumented symbol UIState. >> WARNING: Trying to document registerListProperty as a member of undocumented symbol UIState. >> WARNING: Trying to document registerDictProperty as a member of undocumented symbol UIState. >> WARNING: Trying to document setProperty as a member of undocumented symbol UIState. >> WARNING: Trying to document setProperties as a member of undocumented symbol UIState. >> WARNING: Trying to document getView as a member of undocumented symbol EmperorViewController. >> WARNING: Trying to document hasMetadataField as a member of undocumented symbol EmperorViewController. >> WARNING: Trying to document decompositionName as a member of undocumented symbol EmperorAttributeABC. >> WARNING: Trying to document getView as a member of undocumented symbol EmperorAttributeABC. >> WARNING: Trying to document setMetadataField as a member of undocumented symbol EmperorAttributeABC. >> WARNING: Trying to document getMetadataField as a member of undocumented symbol EmperorAttributeABC. >> WARNING: Trying to document getSlickGridDataset as a member of undocumented symbol EmperorAttributeABC. >> WARNING: Trying to document setSlickGridDataset as a member of undocumented symbol EmperorAttributeABC. >> WARNING: Trying to document bodyGrid as a member of undocumented symbol this. >> WARNING: Trying to document resize as a member of undocumented symbol EmperorAttributeABC. >> WARNING: Trying to document toJSON as a member of undocumented symbol EmperorAttributeABC. >> WARNING: Trying to document fromJSON as a member of undocumented symbol EmperorAttributeABC. >> WARNING: Trying to document refreshMetadata as a member of undocumented symbol EmperorAttributeABC. >> WARNING: Trying to document setEnabled as a member of undocumented symbol EmperorAttributeABC. >> WARNING: Trying to document toJSON as a member of undocumented symbol ScalarViewControllerABC. >> WARNING: Trying to document fromJSON as a member of undocumented symbol ScalarViewControllerABC. >> WARNING: Trying to document resize as a member of undocumented symbol ScalarViewControllerABC. >> WARNING: Trying to document setEnabled as a member of undocumented symbol ScalarViewControllerABC. >> WARNING: Trying to document setPlottableAttributes as a member of undocumented symbol ScalarViewControllerABC. >> WARNING: Trying to document setAllPlottableAttributes as a member of undocumented symbol ScalarViewControllerABC. >> WARNING: Trying to document scaleValue as a member of undocumented symbol ScalarViewControllerABC. >> WARNING: Trying to document getScale as a member of undocumented symbol ScalarViewControllerABC. >> WARNING: Trying to document getGeometryFactor as a member of undocumented symbol DecompositionView. >> WARNING: Trying to document getTubes as a member of undocumented symbol DecompositionView. >> WARNING: Trying to document vertexShader as a member of undocumented symbol DecompositionView#_fastInit. >> WARNING: Trying to document getVisibleCount as a member of undocumented symbol DecompositionView. >> WARNING: Trying to document updatePositions as a member of undocumented symbol DecompositionView. >> WARNING: Trying to document changeVisibleDimensions as a member of undocumented symbol DecompositionView. >> WARNING: Trying to document flipVisibleDimension as a member of undocumented symbol DecompositionView. >> WARNING: Trying to document setCategory as a member of undocumented symbol DecompositionView. >> WARNING: Trying to document hideEdgesForPlottables as a member of undocumented symbol DecompositionView. >> WARNING: Trying to document showEdgesForPlottables as a member of undocumented symbol DecompositionView. >> WARNING: Trying to document setColor as a member of undocumented symbol DecompositionView. >> WARNING: Trying to document setVisibility as a member of undocumented symbol DecompositionView. >> WARNING: Trying to document setScale as a member of undocumented symbol DecompositionView. >> WARNING: Trying to document setOpacity as a member of undocumented symbol DecompositionView. >> WARNING: Trying to document toggleLabelVisibility as a member of undocumented symbol DecompositionView. >> WARNING: Trying to document setEmissive as a member of undocumented symbol DecompositionView. >> WARNING: Trying to document groupByColor as a member of undocumented symbol DecompositionView. >> WARNING: Trying to document getAndClearOldMarkers as a member of undocumented symbol DecompositionView. >> WARNING: Trying to document setPlottableAttributes as a member of undocumented symbol VisibilityController. >> WARNING: Can't augment contributer: THREE.Curve, not found. >> WARNING: Can't augment contributer: ScalarViewControllerABC, not found. 243 warnings. sphinx-build -b html -d build/doctrees -W source build/html Running Sphinx v7.4.7 loading translations [en]... done making output directory... done Exception occurred: File "/build/reproducible-path/emperor-1.0.3+ds/doc/source/conf.py", line 274, in setup app.add_javascript('copybutton.js') ^^^^^^^^^^^^^^^^^^ AttributeError: 'Sphinx' object has no attribute 'add_javascript' The full traceback has been saved in /tmp/sphinx-err-fsyk0pls.log, if you want to report the issue to the developers. Please also report this if it was a user error, so that a better error message can be provided next time. A bug report can be filed in the tracker at . Thanks! make[1]: *** [Makefile:57: html] Error 2 make[1]: Leaving directory '/build/reproducible-path/emperor-1.0.3+ds/doc' '/build/reproducible-path/emperor-1.0.3+ds/tests/test_data' -> '/build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/tests/test_data' '/build/reproducible-path/emperor-1.0.3+ds/tests/test_data/.some-hidden-file' -> '/build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/tests/test_data/.some-hidden-file' '/build/reproducible-path/emperor-1.0.3+ds/tests/test_data/dir-with-only-hidden-files' -> '/build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/tests/test_data/dir-with-only-hidden-files' '/build/reproducible-path/emperor-1.0.3+ds/tests/test_data/dir-with-only-hidden-files/.1.txt' -> '/build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/tests/test_data/dir-with-only-hidden-files/.1.txt' '/build/reproducible-path/emperor-1.0.3+ds/tests/test_data/dir-with-only-hidden-files/.2.txt' -> '/build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/tests/test_data/dir-with-only-hidden-files/.2.txt' '/build/reproducible-path/emperor-1.0.3+ds/tests/test_data/dir-with-only-hidden-files/.3.txt' -> '/build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/tests/test_data/dir-with-only-hidden-files/.3.txt' '/build/reproducible-path/emperor-1.0.3+ds/tests/test_data/dir-with-only-hidden-files/.4.txt' -> '/build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/tests/test_data/dir-with-only-hidden-files/.4.txt' '/build/reproducible-path/emperor-1.0.3+ds/tests/test_data/procrustes_results.txt' -> '/build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/tests/test_data/procrustes_results.txt' '/build/reproducible-path/emperor-1.0.3+ds/tests/test_data/unweighted_unifrac_pc_transformed_reference.txt' -> '/build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/tests/test_data/unweighted_unifrac_pc_transformed_reference.txt' '/build/reproducible-path/emperor-1.0.3+ds/tests/test_data/weighted_unifrac_pc_transformed_q1.txt' -> '/build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/tests/test_data/weighted_unifrac_pc_transformed_q1.txt' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/emperor-1.0.3+ds' if [ ! -d tests/javascript_tests/qunit/ ]; then \ mkdir tests/javascript_tests/qunit ; \ cd tests/javascript_tests/qunit/ && ln -s /usr/share/javascript/qunit/qunit.css qunit-min.css \ && ln -s /usr/share/javascript/qunit/qunit.min.js qunit-min.js ; \ fi PYTHONPATH=.pybuild/`find .pybuild -name cpython3*_emperor -type d|head -n 1`/build pytest-3 ============================= test session starts ============================== platform linux -- Python 3.12.5, pytest-8.3.2, pluggy-1.5.0 rootdir: /build/reproducible-path/emperor-1.0.3+ds plugins: typeguard-4.3.0 collected 112 items tests/test_core.py ..................................................... [ 47%] ................................. [ 76%] tests/test_format.py . [ 77%] tests/test_pandas.py ...... [ 83%] tests/test_qiime_backports/test_make_3d_plots.py ... [ 85%] tests/test_qiime_backports/test_util.py ...... [ 91%] tests/test_util.py .......... [100%] =============================== warnings summary =============================== emperor/__init__.py:9 /build/reproducible-path/emperor-1.0.3+ds/emperor/__init__.py:9: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html import pkg_resources tests/test_util.py::TopLevelTests::test_nbinstall /usr/lib/python3/dist-packages/notebook/nbextensions.py:15: DeprecationWarning: Jupyter is migrating its paths to use standard platformdirs given by the platformdirs library. To remove this warning and see the appropriate new directories, set the environment variable `JUPYTER_PLATFORM_DIRS=1` and then run `jupyter --paths`. The use of platformdirs will be the default in `jupyter_core` v6 from jupyter_core.paths import ( tests/test_util.py::TopLevelTests::test_nbinstall /usr/lib/python3/dist-packages/notebook/nbextensions.py:111: DeprecationWarning: `install_nbextension`'s `verbose` parameter is deprecated, it will have no effects and will be removed in Notebook 5.0 warnings.warn("`install_nbextension`'s `verbose` parameter is deprecated, it will have no effects and will be removed in Notebook 5.0", DeprecationWarning) -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ======================= 112 passed, 3 warnings in 4.35s ======================== make[1]: Leaving directory '/build/reproducible-path/emperor-1.0.3+ds' create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild rm -f -- debian/python3-emperor.substvars debian/python3-emperor-doc.substvars rm -fr -- debian/.debhelper/generated/python3-emperor/ debian/python3-emperor/ debian/tmp/ debian/.debhelper/generated/python3-emperor-doc/ debian/python3-emperor-doc/ dh_auto_install -O--buildsystem=pybuild install -m0755 -d /build/reproducible-path/emperor-1.0.3\+ds/debian/tmp pybuild --install -i python{version} -p 3.12 --dest-dir /build/reproducible-path/emperor-1.0.3\+ds/debian/tmp I: pybuild pybuild:308: rm -rvf /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor.egg* /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/site.py /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/easy-install.pth /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/f* /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/*.py removed '/build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor.egg-link' removed '/build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/easy-install.pth' removed '/build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/f2py' removed '/build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/f2py3' removed '/build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/f2py3.12' I: pybuild base:311: /usr/bin/python3 setup.py install --root /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running build running build_py running install_lib creating /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor creating /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr creating /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib creating /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12 creating /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages creating /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor creating /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/qiime_backports copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/qiime_backports/make_3d_plots.py -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/qiime_backports copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/qiime_backports/util.py -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/qiime_backports copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/qiime_backports/__init__.py -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/qiime_backports copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/_pandas.py -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/util.py -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/core.py -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/_format_strings.py -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/format.py -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor creating /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files creating /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/css copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/css/emperor.css -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/css creating /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/templates copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/templates/logic-template.html -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/templates copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/templates/jupyter-template.html -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/templates copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/templates/style-template.html -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/templates copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/templates/base-dependencies.html -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/templates copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/templates/standalone-template.html -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/templates copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/templates/html-container-template.html -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/templates creating /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/vendor creating /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/vendor/css copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/vendor/css/chosen-sprite.png -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/vendor/css creating /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/vendor/css/font copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/vendor/css/font/context-menu-icons.woff -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/vendor/css/font copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/vendor/css/font/context-menu-icons.eot -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/vendor/css/font copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/vendor/css/font/context-menu-icons.woff2 -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/vendor/css/font copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/vendor/css/font/context-menu-icons.ttf -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/vendor/css/font copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/vendor/css/spectrum.min.css -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/vendor/css creating /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/vendor/css/images copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/vendor/css/images/ui-bg_glass_55_fbf9ee_1x400.png -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/vendor/css/images copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/vendor/css/images/ui-icons_222222_256x240.png -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/vendor/css/images copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/vendor/css/images/ui-bg_glass_75_e6e6e6_1x400.png -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/vendor/css/images copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/vendor/css/images/ui-bg_glass_75_dadada_1x400.png -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/vendor/css/images copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/vendor/css/images/ui-icons_cd0a0a_256x240.png -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/vendor/css/images copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/vendor/css/images/ui-icons_454545_256x240.png -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/vendor/css/images copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/vendor/css/images/ui-bg_glass_65_ffffff_1x400.png -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/vendor/css/images copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/vendor/css/images/ui-icons_2e83ff_256x240.png -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/vendor/css/images copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/vendor/css/images/ui-bg_highlight-soft_75_ffe45c_1x100.png -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/vendor/css/images copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/vendor/css/images/ui-bg_glass_95_fef1ec_1x400.png -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/vendor/css/images copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/vendor/css/images/ui-bg_highlight-soft_75_cccccc_1x100.png -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/vendor/css/images copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/vendor/css/images/ui-icons_888888_256x240.png -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/vendor/css/images copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/vendor/css/chosen.min.css -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/vendor/css copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/vendor/css/jquery.contextMenu.min.css -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/vendor/css copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/vendor/css/chosen-sprite@2x.png -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/vendor/css copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/vendor/css/slick.grid.min.css -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/vendor/css creating /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/img copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/img/play.png -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/img copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/img/reset.png -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/img copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/img/emperor.png -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/img copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/img/favicon.ico -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/img copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/img/pause.png -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/img creating /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/js copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/js/view.js -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/js copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/js/animations-controller.js -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/js copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/js/trajectory.js -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/js copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/js/util.js -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/js copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/js/sceneplotview3d.js -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/js copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/js/opacity-view-controller.js -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/js copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/js/multi-model.js -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/js copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/js/abc-view-controller.js -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/js copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/js/scale-editor.js -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/js copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/js/ui-state.js -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/js copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/js/model.js -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/js copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/js/shape-controller.js -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/js copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/js/view-controller.js -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/js copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/js/axes-controller.js -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/js copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/js/draw.js -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/js copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/js/animate.js -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/js copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/js/controller.js -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/js copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/js/scale-view-controller.js -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/js copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/js/shapes.js -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/js copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/js/color-editor.js -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/js copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/js/color-view-controller.js -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/js copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/js/visibility-controller.js -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/js copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/support_files/js/shape-editor.js -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/support_files/js copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/emperor/__init__.py -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor creating /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/tests copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/tests/_test_core_strings.py -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/tests creating /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/tests/test_data creating /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/tests/test_data/dir-with-only-hidden-files copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/tests/test_data/dir-with-only-hidden-files/.4.txt -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/tests/test_data/dir-with-only-hidden-files copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/tests/test_data/dir-with-only-hidden-files/.2.txt -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/tests/test_data/dir-with-only-hidden-files copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/tests/test_data/dir-with-only-hidden-files/.1.txt -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/tests/test_data/dir-with-only-hidden-files copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/tests/test_data/dir-with-only-hidden-files/.3.txt -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/tests/test_data/dir-with-only-hidden-files copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/tests/test_data/.some-hidden-file -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/tests/test_data copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/tests/test_data/unweighted_unifrac_pc_transformed_reference.txt -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/tests/test_data copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/tests/test_data/procrustes_results.txt -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/tests/test_data copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/tests/test_data/weighted_unifrac_pc_transformed_q1.txt -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/tests/test_data copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/tests/all_tests.py -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/tests copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/tests/test_pandas.py -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/tests copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/tests/test_format.py -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/tests copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/tests/test_util.py -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/tests copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/tests/__init__.py -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/tests copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/tests/_test_format_strings.py -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/tests copying /build/reproducible-path/emperor-1.0.3+ds/.pybuild/cpython3_3.12_emperor/build/tests/test_core.py -> /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/tests byte-compiling /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/qiime_backports/make_3d_plots.py to make_3d_plots.cpython-312.pyc byte-compiling /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/qiime_backports/util.py to util.cpython-312.pyc byte-compiling /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/qiime_backports/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/_pandas.py to _pandas.cpython-312.pyc byte-compiling /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/util.py to util.cpython-312.pyc byte-compiling /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/core.py to core.cpython-312.pyc byte-compiling /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/_format_strings.py to _format_strings.cpython-312.pyc byte-compiling /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/format.py to format.cpython-312.pyc byte-compiling /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/tests/_test_core_strings.py to _test_core_strings.cpython-312.pyc byte-compiling /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/tests/all_tests.py to all_tests.cpython-312.pyc byte-compiling /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/tests/test_pandas.py to test_pandas.cpython-312.pyc byte-compiling /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/tests/test_format.py to test_format.cpython-312.pyc byte-compiling /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/tests/test_util.py to test_util.cpython-312.pyc byte-compiling /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/tests/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/tests/_test_format_strings.py to _test_format_strings.cpython-312.pyc byte-compiling /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/tests/test_core.py to test_core.cpython-312.pyc running install_egg_info running egg_info writing emperor.egg-info/PKG-INFO writing dependency_links to emperor.egg-info/dependency_links.txt writing requirements to emperor.egg-info/requires.txt writing top-level names to emperor.egg-info/top_level.txt reading manifest file 'emperor.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no directories found matching 'scripts' warning: no previously-included files matching '*.pyo' found anywhere in distribution warning: no previously-included files matching '.git' found anywhere in distribution warning: no previously-included files matching '*~' found anywhere in distribution adding license file 'LICENSE.md' writing manifest file 'emperor.egg-info/SOURCES.txt' Copying emperor.egg-info to /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor/usr/lib/python3.12/dist-packages/emperor-1.0.3.egg-info Skipping SOURCES.txt running install_scripts debian/rules override_dh_installdocs make[1]: Entering directory '/build/reproducible-path/emperor-1.0.3+ds' dh_installdocs install -m0755 -d debian/python3-emperor/usr/share/doc/python3-emperor install -p -m0644 debian/copyright debian/python3-emperor/usr/share/doc/python3-emperor/copyright install -m0755 -d debian/python3-emperor-doc/usr/share/doc/python3-emperor-doc install -m0755 -d debian/python3-emperor-doc/usr/share/doc/python3-emperor cd './doc/build/jsdoc/..' && find 'jsdoc' \( -type f -or -type l \) -and ! -empty -print0 | LC_ALL=C sort -z | xargs -0 -I {} cp --reflink=auto --parents -dp {} /build/reproducible-path/emperor-1.0.3+ds/debian/python3-emperor-doc/usr/share/doc/python3-emperor chmod -R u\+rw,go=rX debian/python3-emperor-doc/usr/share/doc install -p -m0644 debian/copyright debian/python3-emperor-doc/usr/share/doc/python3-emperor-doc/copyright install -m0755 -d debian/python3-emperor-doc/usr/share/doc-base/ install -p -m0644 debian/python3-emperor-doc.doc-base debian/python3-emperor-doc/usr/share/doc-base/python3-emperor-doc.python3-emperor-doc p="debian/python3-emperor-doc/usr/share/doc/python3-emperor/jsdoc" ; \ if [ -d "$p" ]; then \ echo "I: Removing date from jsdoc signature line for reproducible builds in $p" ; \ sed -i \ 's%Documentation generated by.*%Documentation generated by JsDoc Toolkit.%' \ `find $p -name "*.html"` ; \ else \ echo "W: Directory '$p' not found." ; \ fi I: Removing date from jsdoc signature line for reproducible builds in debian/python3-emperor-doc/usr/share/doc/python3-emperor/jsdoc make[1]: Leaving directory '/build/reproducible-path/emperor-1.0.3+ds' dh_sphinxdoc -O--buildsystem=pybuild dh_sphinxdoc: warning: Sphinx documentation not found dh_installchangelogs -O--buildsystem=pybuild install -m0755 -d debian/python3-emperor/usr/share/doc/python3-emperor install -p -m0644 debian/.debhelper/generated/python3-emperor/dh_installchangelogs.dch.trimmed debian/python3-emperor/usr/share/doc/python3-emperor/changelog.Debian install -p -m0644 ./ChangeLog.md debian/python3-emperor/usr/share/doc/python3-emperor/changelog install -m0755 -d debian/python3-emperor-doc/usr/share/doc/python3-emperor-doc install -p -m0644 debian/.debhelper/generated/python3-emperor-doc/dh_installchangelogs.dch.trimmed debian/python3-emperor-doc/usr/share/doc/python3-emperor-doc/changelog.Debian install -p -m0644 ./ChangeLog.md debian/python3-emperor-doc/usr/share/doc/python3-emperor-doc/changelog dh_python3 -O--buildsystem=pybuild D: dh_python3 dh_python3:179: version: 6.20240603 D: dh_python3 dh_python3:180: argv: ['/usr/bin/dh_python3', '-O--buildsystem=pybuild'] D: dh_python3 dh_python3:181: options: Namespace(guess_deps=True, skip_private=False, verbose=True, arch=None, package=None, no_package=None, remaining_packages=False, compile_all=False, vrange=None, regexpr=None, accept_upstream_versions=False, depends=None, depends_section=None, recommends=None, recommends_section=None, suggests=None, suggests_section=None, requires=None, shebang=None, ignore_shebangs=False, clean_dbg_pkg=True, no_ext_rename=False, no_shebang_rewrite=False, private_dir=None, O=['--buildsystem=pybuild']) D: dh_python3 dh_python3:182: supported Python versions: 3.12 (default=3.12) D: dh_python3 debhelper:174: source=emperor, binary packages=['python3-emperor', 'python3-emperor-doc'] D: dh_python3 dh_python3:204: processing package python3-emperor... D: dh_python3 fs:50: moving files from debian/python3-emperor/usr/lib/python3.12/dist-packages to debian/python3-emperor/usr/lib/python3/dist-packages/ D: dh_python3 fs:246: removing dist-packages/tests D: dh_python3 fs:335: package python3-emperor details = {'requires.txt': {'debian/python3-emperor/usr/lib/python3/dist-packages/emperor-1.0.3.egg-info/requires.txt'}, 'egg-info': {'debian/python3-emperor/usr/lib/python3/dist-packages/emperor-1.0.3.egg-info/PKG-INFO'}, 'dist-info': set(), 'nsp.txt': set(), 'shebangs': set(), 'public_vers': {Version('3')}, 'private_dirs': {}, 'compile': True, 'ext_vers': set(), 'ext_no_version': set()} D: dh_python3 depends:103: generating dependencies for package python3-emperor D: dh_python3 pydist:173: trying to find dependency for click (python=None) D: dh_python3 pydist:207: dependency: module seems to be installed D: dh_python3 pydist:270: dependency: included in build-deps D: dh_python3 pydist:173: trying to find dependency for jinja2>=2.9 (python=None) D: dh_python3 pydist:207: dependency: module seems to be installed D: dh_python3 pydist:270: dependency: included in build-deps D: dh_python3 pydist:173: trying to find dependency for numpy>=1.7 (python=None) D: dh_python3 pydist:207: dependency: module seems to be installed D: dh_python3 pydist:270: dependency: included in build-deps D: dh_python3 pydist:173: trying to find dependency for pandas (python=None) D: dh_python3 pydist:207: dependency: module seems to be installed D: dh_python3 pydist:270: dependency: included in build-deps D: dh_python3 pydist:173: trying to find dependency for scikit-bio>=0.4.1 (python=None) D: dh_python3 pydist:207: dependency: module seems to be installed D: dh_python3 pydist:263: dependency: included in build-deps with limits D: dh_python3 pydist:173: trying to find dependency for scipy>=0.17.0 (python=None) D: dh_python3 pydist:207: dependency: module seems to be installed D: dh_python3 pydist:270: dependency: included in build-deps D: dh_python3 depends:253: D={'python3-click', 'python3-jinja2', 'python3-skbio (>= 0.5.8-2exp1~)', 'python3-scipy', 'python3-pandas', 'python3-numpy', 'python3:any'}; R=[]; S=[]; E=[], B=[]; RT=[] D: dh_python3 dh_python3:204: processing package python3-emperor-doc... D: dh_python3 fs:335: package python3-emperor-doc details = {'requires.txt': set(), 'egg-info': set(), 'dist-info': set(), 'nsp.txt': set(), 'shebangs': set(), 'public_vers': set(), 'private_dirs': {}, 'compile': False, 'ext_vers': set(), 'ext_no_version': set()} D: dh_python3 depends:103: generating dependencies for package python3-emperor-doc D: dh_python3 depends:253: D=set(); R=[]; S=[]; E=[], B=[]; RT=[] dh_installsystemduser -O--buildsystem=pybuild dh_lintian -O--buildsystem=pybuild install -m0755 -d debian/python3-emperor/usr/share/lintian/overrides install -p -m0644 debian/python3-emperor.lintian-overrides debian/python3-emperor/usr/share/lintian/overrides/python3-emperor dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild install -m0755 -d debian/python3-emperor/usr/lib/python3/dist-packages/emperor/support_files/vendor/css rm -f debian/python3-emperor/usr/lib/python3/dist-packages/emperor/support_files/vendor/css/jquery-ui.min.css ln -s ../../../../../../../share/javascript/jquery-ui/themes/base/jquery-ui.min.css debian/python3-emperor/usr/lib/python3/dist-packages/emperor/support_files/vendor/css/jquery-ui.min.css install -m0755 -d debian/python3-emperor-doc/usr/share/doc/python3-emperor/html/_static//js rm -f debian/python3-emperor-doc/usr/share/doc/python3-emperor/html/_static//js/jquery-1.11.0.min.js ln -s ../../../../../javascript/jquery/jquery.min.js debian/python3-emperor-doc/usr/share/doc/python3-emperor/html/_static//js/jquery-1.11.0.min.js install -m0755 -d debian/python3-emperor-doc/usr/share/doc/python3-emperor/html/_static/bootstrap-3.4.1/js rm -f debian/python3-emperor-doc/usr/share/doc/python3-emperor/html/_static/bootstrap-3.4.1/js/bootstrap.js ln -s ../../../../../../javascript/bootstrap/js/bootstrap.js debian/python3-emperor-doc/usr/share/doc/python3-emperor/html/_static/bootstrap-3.4.1/js/bootstrap.js dh_strip_nondeterminism -O--buildsystem=pybuild Using 1719857220 as canonical time Normalizing debian/python3-emperor/usr/lib/python3/dist-packages/emperor/support_files/vendor/css/chosen-sprite.png using File::StripNondeterminism::handlers::png Normalizing debian/python3-emperor/usr/lib/python3/dist-packages/emperor/support_files/vendor/css/chosen-sprite@2x.png using File::StripNondeterminism::handlers::png Normalizing debian/python3-emperor/usr/lib/python3/dist-packages/emperor/support_files/vendor/css/images/ui-bg_glass_55_fbf9ee_1x400.png using File::StripNondeterminism::handlers::png Normalizing debian/python3-emperor/usr/lib/python3/dist-packages/emperor/support_files/vendor/css/images/ui-icons_222222_256x240.png using File::StripNondeterminism::handlers::png Normalizing debian/python3-emperor/usr/lib/python3/dist-packages/emperor/support_files/vendor/css/images/ui-icons_cd0a0a_256x240.png using File::StripNondeterminism::handlers::png Normalizing debian/python3-emperor/usr/lib/python3/dist-packages/emperor/support_files/vendor/css/images/ui-icons_454545_256x240.png using File::StripNondeterminism::handlers::png Normalizing debian/python3-emperor/usr/lib/python3/dist-packages/emperor/support_files/vendor/css/images/ui-bg_glass_65_ffffff_1x400.png using File::StripNondeterminism::handlers::png Normalizing debian/python3-emperor/usr/lib/python3/dist-packages/emperor/support_files/vendor/css/images/ui-icons_2e83ff_256x240.png using File::StripNondeterminism::handlers::png Normalizing debian/python3-emperor/usr/lib/python3/dist-packages/emperor/support_files/vendor/css/images/ui-bg_glass_75_e6e6e6_1x400.png using File::StripNondeterminism::handlers::png Normalizing debian/python3-emperor/usr/lib/python3/dist-packages/emperor/support_files/vendor/css/images/ui-bg_glass_75_dadada_1x400.png using File::StripNondeterminism::handlers::png Normalizing debian/python3-emperor/usr/lib/python3/dist-packages/emperor/support_files/vendor/css/images/ui-bg_highlight-soft_75_cccccc_1x100.png using File::StripNondeterminism::handlers::png Normalizing debian/python3-emperor/usr/lib/python3/dist-packages/emperor/support_files/vendor/css/images/ui-icons_888888_256x240.png using File::StripNondeterminism::handlers::png Normalizing debian/python3-emperor/usr/lib/python3/dist-packages/emperor/support_files/vendor/css/images/ui-bg_highlight-soft_75_ffe45c_1x100.png using File::StripNondeterminism::handlers::png Normalizing debian/python3-emperor/usr/lib/python3/dist-packages/emperor/support_files/vendor/css/images/ui-bg_glass_95_fef1ec_1x400.png using File::StripNondeterminism::handlers::png Normalizing debian/python3-emperor/usr/lib/python3/dist-packages/emperor/support_files/img/play.png using File::StripNondeterminism::handlers::png Normalizing debian/python3-emperor/usr/lib/python3/dist-packages/emperor/support_files/img/reset.png using File::StripNondeterminism::handlers::png Normalizing debian/python3-emperor/usr/lib/python3/dist-packages/emperor/support_files/img/emperor.png using File::StripNondeterminism::handlers::png Normalizing debian/python3-emperor/usr/lib/python3/dist-packages/emperor/support_files/img/pause.png using File::StripNondeterminism::handlers::png dh_compress -O--buildsystem=pybuild cd debian/python3-emperor cd debian/python3-emperor-doc chmod a-x usr/share/doc/python3-emperor/changelog usr/share/doc/python3-emperor/changelog.Debian gzip -9nf usr/share/doc/python3-emperor/changelog usr/share/doc/python3-emperor/changelog.Debian chmod a-x usr/share/doc/python3-emperor-doc/changelog usr/share/doc/python3-emperor-doc/changelog.Debian cd '/build/reproducible-path/emperor-1.0.3+ds' gzip -9nf usr/share/doc/python3-emperor-doc/changelog usr/share/doc/python3-emperor-doc/changelog.Debian cd '/build/reproducible-path/emperor-1.0.3+ds' dh_fixperms -O--buildsystem=pybuild find debian/python3-emperor ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/python3-emperor-doc ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/python3-emperor-doc/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-emperor-doc/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-emperor/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-emperor/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-emperor-doc/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/python3-emperor/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/python3-emperor/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-emperor-doc -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-emperor -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-emperor/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w dh_missing -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild install -m0755 -d debian/python3-emperor/DEBIAN printf '#!/bin/sh\nset -e\n' > debian/python3-emperor/DEBIAN/postinst cat debian/python3-emperor.postinst.debhelper >> debian/python3-emperor/DEBIAN/postinst chmod 0755 -- debian/python3-emperor/DEBIAN/postinst printf '#!/bin/sh\nset -e\n' > debian/python3-emperor/DEBIAN/prerm cat debian/python3-emperor.prerm.debhelper >> debian/python3-emperor/DEBIAN/prerm chmod 0755 -- debian/python3-emperor/DEBIAN/prerm install -m0755 -d debian/python3-emperor-doc/DEBIAN dh_gencontrol -O--buildsystem=pybuild install -m0755 -d debian/python3-emperor-doc/DEBIAN echo misc:Depends= >> debian/python3-emperor-doc.substvars echo misc:Pre-Depends= >> debian/python3-emperor-doc.substvars dpkg-gencontrol -ppython3-emperor-doc -ldebian/changelog -Tdebian/python3-emperor-doc.substvars -cdebian/control -Pdebian/python3-emperor-doc install -m0755 -d debian/python3-emperor/DEBIAN echo misc:Depends= >> debian/python3-emperor.substvars echo misc:Pre-Depends= >> debian/python3-emperor.substvars dpkg-gencontrol -ppython3-emperor -ldebian/changelog -Tdebian/python3-emperor.substvars -cdebian/control -Pdebian/python3-emperor dpkg-gencontrol: warning: Depends field of package python3-emperor-doc: substitution variable ${sphinxdoc:Depends} used, but is not defined chmod 0644 -- debian/python3-emperor/DEBIAN/control chmod 0644 -- debian/python3-emperor-doc/DEBIAN/control dh_md5sums -O--buildsystem=pybuild install -m0755 -d debian/python3-emperor/DEBIAN install -m0755 -d debian/python3-emperor-doc/DEBIAN cd debian/python3-emperor >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/python3-emperor-doc >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/python3-emperor/DEBIAN/md5sums chmod 0644 -- debian/python3-emperor-doc/DEBIAN/md5sums dh_builddeb -O--buildsystem=pybuild dpkg-deb --root-owner-group --build debian/python3-emperor .. dpkg-deb --root-owner-group --build debian/python3-emperor-doc .. dpkg-deb: building package 'python3-emperor' in '../python3-emperor_1.0.3+ds-9.1_all.deb'. dpkg-deb: building package 'python3-emperor-doc' in '../python3-emperor-doc_1.0.3+ds-9.1_all.deb'. dpkg-genbuildinfo --build=binary -O../emperor_1.0.3+ds-9.1_amd64.buildinfo dpkg-genchanges --build=binary -O../emperor_1.0.3+ds-9.1_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-source: info: using options from emperor-1.0.3+ds/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3746715 and its subdirectories I: Current time: Wed Sep 24 12:52:29 -12 2025 I: pbuilder-time-stamp: 1758761549 Thu Aug 22 18:29:31 UTC 2024 I: 1st build successful. Starting 2nd build on remote node infom01-amd64.debian.net. Thu Aug 22 18:29:31 UTC 2024 I: Preparing to do remote build '2' on infom01-amd64.debian.net. Thu Aug 22 18:32:12 UTC 2024 I: Deleting $TMPDIR on infom01-amd64.debian.net. Thu Aug 22 18:32:13 UTC 2024 I: emperor_1.0.3+ds-9.1_amd64.changes: Format: 1.8 Date: Mon, 01 Jul 2024 18:07:00 +0000 Source: emperor Binary: python3-emperor python3-emperor-doc Architecture: all Version: 1.0.3+ds-9.1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Bastian Germann Description: python3-emperor - visualizing high-throughput microbial community data python3-emperor-doc - visualizing high-throughput microbial community data (coc) Closes: 1074593 Changes: emperor (1.0.3+ds-9.1) unstable; urgency=medium . * Non-maintainer upload * Move from jsdoc-toolkit to node-jsdoc2 (Closes: #1074593) Checksums-Sha1: 7ea5f29ddad7172af751fc574823accc2e23e73b 12226 emperor_1.0.3+ds-9.1_amd64.buildinfo d0c87c66ef7fcc2dde55e69597e938341406d903 138192 python3-emperor-doc_1.0.3+ds-9.1_all.deb d9e0cf6d3eddcbaea2a3df48e4a1c2d8511a3fcb 156076 python3-emperor_1.0.3+ds-9.1_all.deb Checksums-Sha256: 32492f41a1396ced2f3534ea92aace4201b4b2e2f007677a9461ae1b98d38dba 12226 emperor_1.0.3+ds-9.1_amd64.buildinfo 01441a002766f1df009a4b9d2d35a3d689f5c1f0ce1a300505627b086bce2672 138192 python3-emperor-doc_1.0.3+ds-9.1_all.deb 86e22e151f2c9804d4c5a719a98414ae1dff766bcab92fdd9cf4e8112cb6ea37 156076 python3-emperor_1.0.3+ds-9.1_all.deb Files: d5903284c7234a3a56c482d09ce2ffff 12226 science optional emperor_1.0.3+ds-9.1_amd64.buildinfo e339ee20d0aa0451ea984c137725e8f9 138192 doc optional python3-emperor-doc_1.0.3+ds-9.1_all.deb a347bdcf8b974dd4ae645d7cde46679f 156076 python optional python3-emperor_1.0.3+ds-9.1_all.deb Thu Aug 22 18:32:14 UTC 2024 I: diffoscope 276 will be used to compare the two builds: Running as unit: rb-diffoscope-amd64_36-25306.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.nVOWOUvh/emperor_1.0.3+ds-9.1.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.nVOWOUvh/emperor_1.0.3+ds-9.1.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.nVOWOUvh/emperor_1.0.3+ds-9.1.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.nVOWOUvh/b1/emperor_1.0.3+ds-9.1_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.nVOWOUvh/b2/emperor_1.0.3+ds-9.1_amd64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.377s) 0.377s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.019s) 0.019s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 710ms CPU time consumed: 711ms Thu Aug 22 18:32:15 UTC 2024 I: diffoscope 276 found no differences in the changes files, and a .buildinfo file also exists. Thu Aug 22 18:32:15 UTC 2024 I: emperor from unstable built successfully and reproducibly on amd64. Thu Aug 22 18:32:17 UTC 2024 I: Submitting .buildinfo files to external archives: Thu Aug 22 18:32:17 UTC 2024 I: Submitting 16K b1/emperor_1.0.3+ds-9.1_amd64.buildinfo.asc Thu Aug 22 18:32:17 UTC 2024 I: Submitting 16K b2/emperor_1.0.3+ds-9.1_amd64.buildinfo.asc Thu Aug 22 18:32:18 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Thu Aug 22 18:32:18 UTC 2024 I: Done submitting .buildinfo files. Thu Aug 22 18:32:18 UTC 2024 I: Removing signed emperor_1.0.3+ds-9.1_amd64.buildinfo.asc files: removed './b1/emperor_1.0.3+ds-9.1_amd64.buildinfo.asc' removed './b2/emperor_1.0.3+ds-9.1_amd64.buildinfo.asc'