Thu Nov 14 14:44:11 UTC 2024 I: starting to build dials/unstable/amd64 on jenkins on '2024-11-14 14:43' Thu Nov 14 14:44:11 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_4/36444/console.log Thu Nov 14 14:44:11 UTC 2024 I: Downloading source for unstable/dials=3.22.1+dfsg3-1 --2024-11-14 14:44:11-- http://deb.debian.org/debian/pool/main/d/dials/dials_3.22.1%2bdfsg3-1.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2713 (2.6K) [text/prs.lines.tag] Saving to: ‘dials_3.22.1+dfsg3-1.dsc’ 0K .. 100% 367M=0s 2024-11-14 14:44:11 (367 MB/s) - ‘dials_3.22.1+dfsg3-1.dsc’ saved [2713/2713] Thu Nov 14 14:44:11 UTC 2024 I: dials_3.22.1+dfsg3-1.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: dials Binary: dials, python3-dials Architecture: amd64 Version: 3.22.1+dfsg3-1 Maintainer: Debian Science Maintainers Uploaders: Picca Frédéric-Emmanuel , Roland Mas , Homepage: https://github.com/dials/dials Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/science-team/dials Vcs-Git: https://salsa.debian.org/science-team/dials.git Testsuite: autopkgtest Testsuite-Triggers: python3-all, python3-dials-data, python3-pytest, python3-pytest-mock, python3-pytest-xdist Build-Depends: cmake (>= 3.24.3-1~), debhelper-compat (= 13), dh-sequence-python3, libboost-thread-dev, libcctbx-dev (>= 2024.10), libmsgpack-cxx-dev, patchelf, pybuild-plugin-pyproject, python3-all-dev, python3-biopython , python3-cctbx , python3-dials-data , python3-gemmi , python3-jinja2 , python3-ordered-set , python3-pandas , python3-psutil , python3-pyfai , python3-setuptools, python3-sklearn , python3-tabulate , scons, tcsh | csh | c-shell Package-List: dials deb science optional arch=amd64 python3-dials deb science optional arch=amd64 Checksums-Sha1: 39488c1bc8b5c11551c82c175b5cf807b15f5713 8377904 dials_3.22.1+dfsg3.orig.tar.xz 0bc1ca22b9c073facce2307d1c1b1f297d532a92 13532 dials_3.22.1+dfsg3-1.debian.tar.xz Checksums-Sha256: cb000ae082e44a45b8b4e09c5c3de010f9854066235bf81b2715e972853690d2 8377904 dials_3.22.1+dfsg3.orig.tar.xz eda9473043a7088e1270b2cc85d20e6fe338e429220c71322557b12f2aa2e502 13532 dials_3.22.1+dfsg3-1.debian.tar.xz Files: 25bfdf1fefc4acf6f0bdea21f8cf57c6 8377904 dials_3.22.1+dfsg3.orig.tar.xz 88960c36a6931f72abb3c114faad3d30 13532 dials_3.22.1+dfsg3-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEtBU2D1kett1zr/uD0w3s0lmTIvwFAmc0kLQACgkQ0w3s0lmT IvwI9A//Q8pB0yLNSXN5zkjewRunCSyRiwMcIa7Z5Q14WZ2ZmouNWTHMy4nhGg2d uZDtt6/PPCZBRVmpSb1Vm2F5a2QX07dCLMnxqPhKqCoAgykSF+TZBmX6lZhkldjy dHEUtY/WoC3X7edOjyIWmpLkJVF7XrG7fctPmvzaOND8C/Oy/wA4bVbaVZ1PxiZ7 2XBI+hYmoxWUZTAOjvbydsWIO9puhJZQzrMlgoZIAoJsT+oQgByKgmz3/ZhniVks pcPQF11U1/LeNNBSLHBIf/XfbF1assOL0dKI1R3sDPJa771sT1Xf5DT77ZMHG18/ A/3uJQj37k4OfcFLvZMwF9FXfOtIXXWFneM8U2CdpH/dIixPGRPG8EP/hhtnW2g1 vy8ChNW5/qQI2rk7deEnKm6HU2jjf3Qo2ojlwOyuuklN6QglsQjpfaUa4Odyo/nA MJQumB8aoAf7OfIZRMwL+k6fVrwqQM9JDEdJcHRnFKcff8q/hSL7tLMMsf5U+hrW u2To9PzN98IrXHnZ97++8UEXQVvD8gXjcRXu5y83u7Qig0+qhkMSwXek7zHGHWPv oZ+vnlcnQb0Ri88t13i6G9nToPOXWuJkhVgqfbxNAIfzEWAUGJ+N/722JKCD3cOS jg7gvGUGiqiQRH1wvPEGikVWNCqrJMpcSWoEnwCU0xBJKjGgUgE= =KAS1 -----END PGP SIGNATURE----- Thu Nov 14 14:44:11 UTC 2024 I: Checking whether the package is not for us Thu Nov 14 14:44:11 UTC 2024 I: Starting 1st build on remote node ionos15-amd64.debian.net. Thu Nov 14 14:44:11 UTC 2024 I: Preparing to do remote build '1' on ionos15-amd64.debian.net. Thu Nov 14 14:45:09 UTC 2024 I: Deleting $TMPDIR on ionos15-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Wed Dec 17 09:07:12 -12 2025 I: pbuilder-time-stamp: 1766005632 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [dials_3.22.1+dfsg3-1.dsc] I: copying [./dials_3.22.1+dfsg3.orig.tar.xz] I: copying [./dials_3.22.1+dfsg3-1.debian.tar.xz] I: Extracting source gpgv: Signature made Wed Nov 13 11:42:44 2024 gpgv: using RSA key B415360F591EB6DD73AFFB83D30DECD2599322FC gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./dials_3.22.1+dfsg3-1.dsc: no acceptable signature found dpkg-source: info: extracting dials in dials-3.22.1+dfsg3 dpkg-source: info: unpacking dials_3.22.1+dfsg3.orig.tar.xz dpkg-source: info: unpacking dials_3.22.1+dfsg3-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 0001-fix-linkage-with-system-libraries.patch dpkg-source: info: applying 0002-install-requires.patch dpkg-source: info: applying 0003-Use-system-Mathjax.patch dpkg-source: info: applying 0004-Use-system-jquery.patch dpkg-source: info: applying 0005-Use-system-bootstrap.patch dpkg-source: info: applying 0006-Use-system-katex.patch dpkg-source: info: applying 0007-Use-system-plotly.patch dpkg-source: info: applying 0008-Find-system-dxtbx.patch dpkg-source: info: applying 0009-relax-double-comparison.patch dpkg-source: info: applying 0010-fix-dont-link-msgpack-cxx dpkg-source: info: applying 0011-Replace-orderedset-with-ordered_set.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/2460166/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='f114348330e9426cab67026d60f1edde' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='2460166' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.kxhNMcJb/pbuilderrc_lyAg --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.kxhNMcJb/b1 --logfile b1/build.log dials_3.22.1+dfsg3-1.dsc' SUDO_GID='111' SUDO_UID='106' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://213.165.73.152:3128' I: uname -a Linux ionos15-amd64 6.10.11+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.10.11-1~bpo12+1 (2024-10-03) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin I: user script /srv/workspace/pbuilder/2460166/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: cmake (>= 3.24.3-1~), debhelper-compat (= 13), dh-sequence-python3, libboost-thread-dev, libcctbx-dev (>= 2024.10), libmsgpack-cxx-dev, patchelf, pybuild-plugin-pyproject, python3-all-dev, python3-biopython, python3-cctbx, python3-dials-data, python3-gemmi, python3-jinja2, python3-ordered-set, python3-pandas, python3-psutil, python3-pyfai, python3-setuptools, python3-sklearn, python3-tabulate, scons, tcsh | csh | c-shell dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19969 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on cmake (>= 3.24.3-1~); however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on libboost-thread-dev; however: Package libboost-thread-dev is not installed. pbuilder-satisfydepends-dummy depends on libcctbx-dev (>= 2024.10); however: Package libcctbx-dev is not installed. pbuilder-satisfydepends-dummy depends on libmsgpack-cxx-dev; however: Package libmsgpack-cxx-dev is not installed. pbuilder-satisfydepends-dummy depends on patchelf; however: Package patchelf is not installed. pbuilder-satisfydepends-dummy depends on pybuild-plugin-pyproject; however: Package pybuild-plugin-pyproject is not installed. pbuilder-satisfydepends-dummy depends on python3-all-dev; however: Package python3-all-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-biopython; however: Package python3-biopython is not installed. pbuilder-satisfydepends-dummy depends on python3-cctbx; however: Package python3-cctbx is not installed. pbuilder-satisfydepends-dummy depends on python3-dials-data; however: Package python3-dials-data is not installed. pbuilder-satisfydepends-dummy depends on python3-gemmi; however: Package python3-gemmi is not installed. pbuilder-satisfydepends-dummy depends on python3-jinja2; however: Package python3-jinja2 is not installed. pbuilder-satisfydepends-dummy depends on python3-ordered-set; however: Package python3-ordered-set is not installed. pbuilder-satisfydepends-dummy depends on python3-pandas; however: Package python3-pandas is not installed. pbuilder-satisfydepends-dummy depends on python3-psutil; however: Package python3-psutil is not installed. pbuilder-satisfydepends-dummy depends on python3-pyfai; however: Package python3-pyfai is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-sklearn; however: Package python3-sklearn is not installed. pbuilder-satisfydepends-dummy depends on python3-tabulate; however: Package python3-tabulate is not installed. pbuilder-satisfydepends-dummy depends on scons; however: Package scons is not installed. pbuilder-satisfydepends-dummy depends on tcsh | csh | c-shell; however: Package tcsh is not installed. Package csh is not installed. Package c-shell is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: adwaita-icon-theme{a} at-spi2-common{a} autoconf{a} automake{a} autopoint{a} autotools-dev{a} blt{a} bsdextrautils{a} ca-certificates{a} clang-18{a} cmake{a} cmake-data{a} dbus{a} dbus-bin{a} dbus-daemon{a} dbus-session-bus-common{a} dbus-system-bus-common{a} dbus-user-session{a} dconf-gsettings-backend{a} dconf-service{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-font-awesome{a} fonts-lato{a} fonts-lyx{a} fonts-urw-base35{a} gdb{a} gettext{a} gettext-base{a} groff-base{a} gtk-update-icon-cache{a} hicolor-icon-theme{a} intltool-debian{a} iso-codes{a} libaec0{a} libann-cctbx-dev{a} libann-cctbx0{a} 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python3-dateutil{a} python3-debugpy{a} python3-decorator{a} python3-dev{a} python3-dials-data{a} python3-executing{a} python3-fabio{a} python3-flexcache{a} python3-flexparser{a} python3-fonttools{a} python3-freetype{a} python3-fs{a} python3-gemmi{a} python3-h5py{a} python3-h5py-serial{a} python3-hdf5plugin{a} python3-idna{a} python3-importlib-resources{a} python3-inflect{a} python3-iniconfig{a} python3-installer{a} python3-ipykernel{a} python3-ipython{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-jedi{a} python3-jinja2{a} python3-joblib{a} python3-jupyter-client{a} python3-jupyter-core{a} python3-kiwisolver{a} python3-lxml{a} python3-lz4{a} python3-mako{a} python3-markupsafe{a} python3-matplotlib{a} python3-matplotlib-inline{a} python3-minimal{a} python3-more-itertools{a} python3-mpmath{a} python3-mrcfile{a} python3-natsort{a} python3-nest-asyncio{a} python3-numexpr{a} python3-numpy{a} python3-nxmx{a} python3-opengl{a} python3-ordered-set{a} python3-packaging{a} python3-pandas{a} python3-pandas-lib{a} python3-parso{a} python3-pexpect{a} python3-pil{a} python3-pil.imagetk{a} python3-pint{a} python3-pkg-resources{a} python3-platformdirs{a} python3-pluggy{a} python3-pooch{a} python3-procrunner{a} python3-prompt-toolkit{a} python3-psutil{a} python3-ptyprocess{a} python3-pure-eval{a} python3-py{a} python3-pycbf{a} python3-pyfai{a} python3-pygments{a} python3-pymol{a} python3-pyopencl{a} python3-pyparsing{a} python3-pyproject-hooks{a} python3-pyqt5{a} python3-pyqt5.qtchart{a} python3-pyqt5.qtmultimedia{a} python3-pyqt5.qtopengl{a} python3-pyqt5.qtpositioning{a} python3-pyqt5.qtquick{a} python3-pyqt5.qtremoteobjects{a} python3-pyqt5.qtsensors{a} python3-pyqt5.qtserialport{a} python3-pyqt5.qtsql{a} python3-pyqt5.qtsvg{a} python3-pyqt5.qttexttospeech{a} python3-pyqt5.qtwebchannel{a} python3-pyqt5.qtwebkit{a} python3-pyqt5.qtwebsockets{a} python3-pyqt5.qtxmlpatterns{a} python3-pyqt5.sip{a} python3-pytest{a} python3-pytools{a} python3-qtconsole{a} python3-qtpy{a} python3-reportlab{a} python3-requests{a} python3-rlpycairo{a} python3-scipy{a} python3-setuptools{a} python3-silx{a} python3-six{a} python3-sklearn{a} python3-sklearn-lib{a} python3-stack-data{a} python3-sympy{a} python3-tabulate{a} python3-threadpoolctl{a} python3-tk{a} python3-toml{a} python3-tornado{a} python3-tqdm{a} python3-traitlets{a} python3-typeguard{a} python3-typeshed{a} python3-typing-extensions{a} python3-tz{a} python3-ufolib2{a} python3-urllib3{a} python3-wcwidth{a} python3-wheel{a} python3-wxgtk4.0{a} python3-yaml{a} python3-zipp{a} python3-zmq{a} python3.12{a} python3.12-dev{a} python3.12-minimal{a} python3.12-tk{a} python3.13{a} python3.13-dev{a} python3.13-minimal{a} python3.13-tk{a} readline-common{a} scons{a} sensible-utils{a} sgml-base{a} shared-mime-info{a} sphinx-rtd-theme-common{a} systemd{a} systemd-sysv{a} tcsh{a} tk8.6-blt2.5{a} tzdata{a} ucf{a} unicode-data{a} w3c-sgml-lib{a} x11-common{a} xfonts-encodings{a} xfonts-utils{a} xkb-data{a} xml-core{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: at-spi2-core chrony curl fonts-dejavu-extra geoclue-2.0 gstreamer1.0-plugins-base hdf5-filter-plugin hdf5-filter-plugin-blosc-serial hdf5-filter-plugin-zfp-serial hdf5-plugin-lzf isympy-common javascript-common krb5-locales libarchive-cpio-perl libc6-dbg libclang-rt-18-dev libgdk-pixbuf2.0-bin libglib2.0-data libglut-dev libgtk-3-bin libhwloc-plugins libkmod2 libldap-common libltdl-dev libmail-sendmail-perl libnss-systemd libpam-cap libqt5sql5-ibase libqt5sql5-mysql libqt5sql5-odbc libqt5sql5-psql libqt5sql5-sqlite libqt5sql5-tds librsvg2-common libsasl2-modules linux-sysctl-defaults llvm-18-dev lynx mesa-vulkan-drivers ncbi-blast+ ntpsec openntpd psmisc publicsuffix python-biopython-doc python-pyopencl-doc python3-babel python3-bottleneck python3-bs4 python3-cssselect python3-html5lib python3-numba python3-odf python3-olefile python3-openpyxl python3-pyqt5.qtwebengine python3-simplejson python3-tables qt5-gtk-platformtheme qtspeech5-flite-plugin qtspeech5-speechd-plugin qttranslations5-l10n qtwayland5 systemd-cryptsetup systemd-timesyncd wget xdg-user-dirs 0 packages upgraded, 538 newly installed, 0 to remove and 0 not upgraded. Need to get 441 MB of archives. After unpacking 2239 MB will be used. The following packages have unmet dependencies: pbuilder-satisfydepends-dummy : Depends: libcctbx-dev (>= 2024.10) but 2024.8+ds2+~3.21.1+ds1-3 is to be installed Unable to resolve dependencies! Giving up... The following NEW packages will be installed: adwaita-icon-theme{a} at-spi2-common{a} autoconf{a} automake{a} autopoint{a} autotools-dev{a} blt{a} bsdextrautils{a} ca-certificates{a} clang-18{a} cmake{a} cmake-data{a} dbus{a} dbus-bin{a} dbus-daemon{a} dbus-session-bus-common{a} dbus-system-bus-common{a} dbus-user-session{a} dconf-gsettings-backend{a} dconf-service{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-font-awesome{a} fonts-lato{a} fonts-lyx{a} fonts-urw-base35{a} gdb{a} gettext{a} gettext-base{a} groff-base{a} gtk-update-icon-cache{a} hicolor-icon-theme{a} intltool-debian{a} iso-codes{a} libaec0{a} libann-cctbx-dev{a} libann-cctbx0{a} libantlr3c-3.4-0{a} libapparmor1{a} libarchive-zip-perl{a} libarchive13t64{a} libasyncns0{a} libatk-bridge2.0-0t64{a} libatk1.0-0t64{a} libatspi2.0-0t64{a} libavahi-client3{a} libavahi-common-data{a} libavahi-common3{a} libbabeltrace1{a} libblas3{a} libboost-atomic1.83-dev{a} libboost-atomic1.83.0{a} libboost-chrono1.83-dev{a} libboost-chrono1.83.0t64{a} libboost-date-time1.83-dev{a} libboost-date-time1.83.0{a} libboost-dev{a} libboost-numpy1.83.0{a} libboost-python-dev{a} libboost-python1.83-dev{a} libboost-python1.83.0{a} libboost-serialization1.83-dev{a} libboost-serialization1.83.0{a} libboost-system1.83-dev{a} libboost-system1.83.0{a} libboost-thread-dev{a} libboost-thread1.83-dev{a} libboost-thread1.83.0{a} libboost-timer1.83.0{a} libboost1.83-dev{a} libbrotli1{a} libcairo-gobject2{a} libcairo2{a} libcap2-bin{a} libcbf1t64{a} libccp4-data{a} libccp4-dev{a} libccp4c0t64{a} libccp4f0t64{a} libcctbx-dev{a} libcctbx0{a} libclang-common-18-dev{a} libclang-cpp18{a} libclang1-18{a} libcloudproviders0{a} libcolord2{a} libcom-err2{a} libcups2t64{a} libcurl3t64-gnutls{a} libcurl4t64{a} libdatrie1{a} libdbus-1-3{a} libdconf1{a} libdebhelper-perl{a} libdebuginfod-common{a} libdebuginfod1t64{a} libdeflate0{a} libdouble-conversion3{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm-intel1{a} libdrm-radeon1{a} libdrm2{a} libdw1t64{a} libedit2{a} libegl-mesa0{a} libegl1{a} libelf1t64{a} libepoxy0{a} libevdev2{a} libexpat1{a} libexpat1-dev{a} libfile-stripnondeterminism-perl{a} libflac12t64{a} libfontconfig1{a} libfontenc1{a} libfreetype6{a} libfribidi0{a} libgbm1{a} libgc1{a} libgdk-pixbuf-2.0-0{a} libgdk-pixbuf2.0-common{a} libgfortran5{a} libgl1{a} libgl1-mesa-dri{a} libglapi-mesa{a} libglew2.2{a} libglib2.0-0t64{a} libglu1-mesa{a} libglvnd0{a} libglx-mesa0{a} libglx0{a} libgraphite2-3{a} libgssapi-krb5-2{a} libgstreamer-plugins-base1.0-0{a} libgstreamer1.0-0{a} libgtk-3-0t64{a} libgtk-3-common{a} libgudev-1.0-0{a} libharfbuzz0b{a} libhdf5-103-1t64{a} libhdf5-hl-100t64{a} libhwloc15{a} libhyphen0{a} libice6{a} libicu72{a} libimagequant0{a} libinput-bin{a} libinput10{a} libipt2{a} libjbig0{a} libjpeg62-turbo{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-sphinxdoc{a} libjs-underscore{a} libjson-c5{a} libjsoncpp26{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} liblbfgsb0{a} liblcms2-2{a} libldap-2.5-0{a} liblerc4{a} libllvm18{a} libllvm19{a} liblzf1{a} libmagic-mgc{a} libmagic1t64{a} libmd4c0{a} libmmdb2-0{a} libmp3lame0{a} libmpg123-0t64{a} libmsgpack-cxx-dev{a} libmtdev1t64{a} libnetcdf19t64{a} libnghttp2-14{a} libnghttp3-9{a} libngtcp2-16{a} libngtcp2-crypto-gnutls8{a} libnorm1t64{a} libnotify4{a} libnsl2{a} libobjc-14-dev{a} libobjc4{a} libogg0{a} libopengl0{a} libopenjp2-7{a} libopus0{a} liborc-0.4-0t64{a} libpam-systemd{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpciaccess0{a} libpcre2-16-0{a} libpcre2-32-0{a} libpgm-5.3-0t64{a} libpipeline1{a} libpixman-1-0{a} libpng16-16t64{a} libpocl2-common{a} libpocl2t64{a} libproc2-0{a} libpsl5t64{a} libpulse0{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.12-dev{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.12t64{a} libpython3.13{a} libpython3.13-dev{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libqhull-r8.0{a} libqt5charts5{a} libqt5core5t64{a} libqt5dbus5t64{a} libqt5designer5{a} libqt5gui5t64{a} libqt5help5{a} libqt5location5{a} libqt5multimedia5{a} libqt5multimediawidgets5{a} libqt5network5t64{a} libqt5opengl5t64{a} libqt5positioning5{a} libqt5positioningquick5{a} libqt5printsupport5t64{a} libqt5qml5{a} libqt5qmlmodels5{a} libqt5quick5{a} libqt5quickwidgets5{a} libqt5remoteobjects5{a} libqt5sensors5{a} libqt5serialport5{a} libqt5sql5t64{a} libqt5svg5{a} libqt5test5t64{a} libqt5texttospeech5{a} libqt5webchannel5{a} libqt5webkit5{a} libqt5websockets5{a} libqt5widgets5t64{a} libqt5xml5t64{a} libqt5xmlpatterns5{a} libraqm0{a} libreadline8t64{a} librhash1{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsensors-config{a} libsensors5{a} libsharpyuv0{a} libsm6{a} libsndfile1{a} libsodium23{a} libsource-highlight-common{a} libsource-highlight4t64{a} libssh2-1t64{a} libssm2{a} libsystemd-shared{a} libsz2{a} libtcl8.6{a} libthai-data{a} libthai0{a} libtiff6{a} libtirpc-common{a} libtirpc3t64{a} libtk8.6{a} libtool{a} libuchardet0{a} libunwind8{a} libuv1t64{a} libvorbis0a{a} libvorbisenc2{a} libvulkan1{a} libwacom-common{a} libwacom9{a} libwayland-client0{a} libwayland-cursor0{a} libwayland-egl1{a} libwayland-server0{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libwoff1{a} libwxbase3.2-1t64{a} libwxgtk-gl3.2-1t64{a} libwxgtk3.2-1t64{a} libx11-6{a} libx11-data{a} libx11-xcb1{a} libxau6{a} libxcb-dri2-0{a} libxcb-dri3-0{a} libxcb-glx0{a} libxcb-icccm4{a} libxcb-image0{a} libxcb-keysyms1{a} libxcb-present0{a} libxcb-randr0{a} libxcb-render-util0{a} libxcb-render0{a} libxcb-shape0{a} libxcb-shm0{a} libxcb-sync1{a} libxcb-util1{a} libxcb-xfixes0{a} libxcb-xinerama0{a} libxcb-xinput0{a} libxcb-xkb1{a} libxcb1{a} libxcomposite1{a} libxcursor1{a} libxdamage1{a} libxdmcp6{a} libxext6{a} libxfixes3{a} libxft2{a} libxi6{a} libxinerama1{a} libxkbcommon-x11-0{a} libxkbcommon0{a} libxml2{a} libxrandr2{a} libxrender1{a} libxshmfence1{a} libxslt1.1{a} libxss1{a} libxtst6{a} libxxf86vm1{a} libyaml-0-2{a} libz3-4{a} libzmq5{a} llvm-18-linker-tools{a} m4{a} man-db{a} media-types{a} mesa-libgallium{a} netbase{a} ocl-icd-libopencl1{a} openssl{a} patchelf{a} po-debconf{a} pocl-opencl-icd{a} procps{a} pybuild-plugin-pyproject{a} pymol-data{a} python-matplotlib-data{a} python3{a} python3-all{a} python3-all-dev{a} python3-appdirs{a} python3-asttokens{a} python3-attr{a} python3-autocommand{a} python3-biopython{a} python3-brotli{a} python3-build{a} python3-cairo{a} python3-cctbx{a} python3-certifi{a} python3-cffi-backend{a} python3-chardet{a} python3-charset-normalizer{a} python3-comm{a} python3-contourpy{a} python3-coverage{a} python3-cycler{a} python3-dateutil{a} python3-debugpy{a} python3-decorator{a} python3-dev{a} python3-dials-data{a} python3-executing{a} python3-fabio{a} python3-flexcache{a} python3-flexparser{a} python3-fonttools{a} python3-freetype{a} python3-fs{a} python3-gemmi{a} python3-h5py{a} python3-h5py-serial{a} python3-hdf5plugin{a} python3-idna{a} python3-importlib-resources{a} python3-inflect{a} python3-iniconfig{a} python3-installer{a} python3-ipykernel{a} python3-ipython{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-jedi{a} python3-jinja2{a} python3-joblib{a} python3-jupyter-client{a} python3-jupyter-core{a} python3-kiwisolver{a} python3-lxml{a} python3-lz4{a} python3-mako{a} python3-markupsafe{a} python3-matplotlib{a} python3-matplotlib-inline{a} python3-minimal{a} python3-more-itertools{a} python3-mpmath{a} python3-mrcfile{a} python3-natsort{a} python3-nest-asyncio{a} python3-numexpr{a} python3-numpy{a} python3-nxmx{a} python3-opengl{a} python3-ordered-set{a} python3-packaging{a} python3-pandas{a} python3-pandas-lib{a} python3-parso{a} python3-pexpect{a} python3-pil{a} python3-pil.imagetk{a} python3-pint{a} python3-pkg-resources{a} python3-platformdirs{a} python3-pluggy{a} python3-pooch{a} python3-procrunner{a} python3-prompt-toolkit{a} python3-psutil{a} python3-ptyprocess{a} python3-pure-eval{a} python3-py{a} python3-pycbf{a} python3-pyfai{a} python3-pygments{a} python3-pymol{a} python3-pyopencl{a} python3-pyparsing{a} python3-pyproject-hooks{a} python3-pyqt5{a} python3-pyqt5.qtchart{a} python3-pyqt5.qtmultimedia{a} python3-pyqt5.qtopengl{a} python3-pyqt5.qtpositioning{a} python3-pyqt5.qtquick{a} python3-pyqt5.qtremoteobjects{a} python3-pyqt5.qtsensors{a} python3-pyqt5.qtserialport{a} python3-pyqt5.qtsql{a} python3-pyqt5.qtsvg{a} python3-pyqt5.qttexttospeech{a} python3-pyqt5.qtwebchannel{a} python3-pyqt5.qtwebkit{a} python3-pyqt5.qtwebsockets{a} python3-pyqt5.qtxmlpatterns{a} python3-pyqt5.sip{a} python3-pytest{a} python3-pytools{a} python3-qtconsole{a} python3-qtpy{a} python3-reportlab{a} python3-requests{a} python3-rlpycairo{a} python3-scipy{a} python3-setuptools{a} python3-silx{a} python3-six{a} python3-sklearn{a} python3-sklearn-lib{a} python3-stack-data{a} python3-sympy{a} python3-tabulate{a} python3-threadpoolctl{a} python3-tk{a} python3-toml{a} python3-tornado{a} python3-tqdm{a} python3-traitlets{a} python3-typeguard{a} python3-typeshed{a} python3-typing-extensions{a} python3-tz{a} python3-ufolib2{a} python3-urllib3{a} python3-wcwidth{a} python3-wheel{a} python3-wxgtk4.0{a} python3-yaml{a} python3-zipp{a} python3-zmq{a} python3.12{a} python3.12-dev{a} python3.12-minimal{a} python3.12-tk{a} python3.13{a} python3.13-dev{a} python3.13-minimal{a} python3.13-tk{a} readline-common{a} scons{a} sensible-utils{a} sgml-base{a} shared-mime-info{a} sphinx-rtd-theme-common{a} systemd{a} systemd-sysv{a} tcsh{a} tk8.6-blt2.5{a} tzdata{a} ucf{a} unicode-data{a} w3c-sgml-lib{a} x11-common{a} xfonts-encodings{a} xfonts-utils{a} xkb-data{a} xml-core{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: at-spi2-core chrony curl fonts-dejavu-extra geoclue-2.0 gstreamer1.0-plugins-base hdf5-filter-plugin hdf5-filter-plugin-blosc-serial hdf5-filter-plugin-zfp-serial hdf5-plugin-lzf isympy-common javascript-common krb5-locales libarchive-cpio-perl libc6-dbg libclang-rt-18-dev libgdk-pixbuf2.0-bin libglib2.0-data libglut-dev libgtk-3-bin libhwloc-plugins libkmod2 libldap-common libltdl-dev libmail-sendmail-perl libnss-systemd libpam-cap libqt5sql5-ibase libqt5sql5-mysql libqt5sql5-odbc libqt5sql5-psql libqt5sql5-sqlite libqt5sql5-tds librsvg2-common libsasl2-modules linux-sysctl-defaults llvm-18-dev lynx mesa-vulkan-drivers ncbi-blast+ ntpsec openntpd psmisc publicsuffix python-biopython-doc python-pyopencl-doc python3-babel python3-bottleneck python3-bs4 python3-cssselect python3-html5lib python3-numba python3-odf python3-olefile python3-openpyxl python3-pyqt5.qtwebengine python3-simplejson python3-tables qt5-gtk-platformtheme qtspeech5-flite-plugin qtspeech5-speechd-plugin qttranslations5-l10n qtwayland5 systemd-cryptsetup systemd-timesyncd wget xdg-user-dirs 0 packages upgraded, 538 newly installed, 0 to remove and 0 not upgraded. Need to get 441 MB of archives. After unpacking 2239 MB will be used. Abort. E: pbuilder-satisfydepends failed. I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/2460166 and its subdirectories Thu Nov 14 14:45:09 UTC 2024 W: No second build log, what happened? Thu Nov 14 14:45:09 UTC 2024 W: Downloading the build dependencies failed Thu Nov 14 14:45:09 UTC 2024 W: Maybe there was a network problem, or the build dependencies are currently uninstallable; consider filing a bug in the last case. Thu Nov 14 14:45:10 UTC 2024 W: Network problems are automatically rescheduled after some hours.