Tue Nov 5 21:28:23 UTC 2024 I: starting to build bitshuffle/unstable/amd64 on jenkins on '2024-11-05 21:28' Tue Nov 5 21:28:23 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_18/22804/console.log Tue Nov 5 21:28:23 UTC 2024 I: Downloading source for unstable/bitshuffle=0.5.1-2 --2024-11-05 21:28:23-- http://deb.debian.org/debian/pool/main/b/bitshuffle/bitshuffle_0.5.1-2.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2643 (2.6K) [text/prs.lines.tag] Saving to: ‘bitshuffle_0.5.1-2.dsc’ 0K .. 100% 276M=0s 2024-11-05 21:28:23 (276 MB/s) - ‘bitshuffle_0.5.1-2.dsc’ saved [2643/2643] Tue Nov 5 21:28:23 UTC 2024 I: bitshuffle_0.5.1-2.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: bitshuffle Binary: bitshuffle Architecture: any Version: 0.5.1-2 Maintainer: Debian PaN Maintainers Uploaders: Debian Science Maintainers , Picca Frédéric-Emmanuel , Thorsten Alteholz , Homepage: https://github.com/kiyo-masui/bitshuffle Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/science-team/bitshuffle Vcs-Git: https://salsa.debian.org/science-team/bitshuffle.git Testsuite: autopkgtest Testsuite-Triggers: hdf5-tools, python3, python3-all, python3-pytest Build-Depends: cython3, debhelper-compat (= 13), dh-exec, dh-python, dh-sequence-numpy3, dh-sequence-python3, hdf5-tools , libhdf5-mpi-dev, libhdf5-serial-dev, liblz4-dev, liblzf-dev, libzstd-dev, mpi-default-bin, pkg-config, pybuild-plugin-pyproject, python3-all-dev, python3-h5py, python3-h5py-mpi, python3-numpy, python3-pytest , python3-setuptools Package-List: bitshuffle deb libs optional arch=any Checksums-Sha1: b4d84b6fdad17b850be1b587775912c7929ebf18 189659 bitshuffle_0.5.1.orig.tar.gz 7c653a6d92e19b49fb5d2714ac05eb6d43e689b6 8104 bitshuffle_0.5.1-2.debian.tar.xz Checksums-Sha256: 2631aaa5d4c24e51415c7b1827d4f9dcf505ad8db03738210da9ce6dab8f5870 189659 bitshuffle_0.5.1.orig.tar.gz 9a10cb3aec0bde6714aef42d92419d0a3ae99c7e4114ded06fa05694cb51fed3 8104 bitshuffle_0.5.1-2.debian.tar.xz Files: b3bf6a9838927f7eb62214981c138e2f 189659 bitshuffle_0.5.1.orig.tar.gz cb675a954e1ed34add34c268ad6a8d62 8104 bitshuffle_0.5.1-2.debian.tar.xz Dgit: 0140f428ecf028f0f90e9785aafa5615650b72f1 debian archive/debian/0.5.1-2 https://git.dgit.debian.org/bitshuffle -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEE2bRTt5m4gw2UXmoKW/VOXhK5ALsFAmbv1sURHHBpY2NhQGRl Ymlhbi5vcmcACgkQW/VOXhK5ALsO9hAAoospvqtZDkopakfZlosK4mU4omnmFAiN 48ms/XoIOk9QWsW+EM0N0hXy1oLXeYEmOlWFzF9guQi1z5daNx7R8tFalKiOOOBr RER4vDuvROSDRuQD11VuEliJ8MsapiH5xsnzgKVt6pUTToAxfbfxjTxqsTayx0Vo 57kSdFJf2hBI5cWYNpsafVCuMoWHzwAGC5DtOiQa2tBu1d4sB1hLShhVUKA8p5G1 zCiTny2wUzi8OB3g/GWot/0RWHMfO6jkxsDkfu1FoiyaKSbe+YziIxEAnMkQ8/oo LXkVWyJqr129/Lco8/Ooct93vFP2lVJMayUlGpI81T3Rb+rioNxYFgohTae9OHpK SbOsz4jbXebLZyhcUdPp6Ckgjv4vdNJduHGPSxd6tUgdN7CB71yjFqwsh1UqlzsA vx0oJwdfLAdaCHqzFeXE4YAPD+hkzyEF9MIdkMYI9c730RtQKoCsfowcyZh0S2pH rFXa8MPYQJVnpQA95FkDDOXmg/VTCzM2yYShZqQrebhNR4FN2AejtIdQP+K7uW5H +zzDkfWe5j/lYL/GRxvZV+dU4T+B+6R0Q8p5OJ/BM/X1EGXGsYm0AKwxnTVMU9gg yfvvpfLuh4sBIdRYBWxLzub752Tbc8UrW11jAknNBTIrPMpeA0s991mOF+UZfU32 tTmUllKJ2cs= =5KSV -----END PGP SIGNATURE----- Tue Nov 5 21:28:23 UTC 2024 I: Checking whether the package is not for us Tue Nov 5 21:28:23 UTC 2024 I: Starting 1st build on remote node ionos5-amd64.debian.net. Tue Nov 5 21:28:23 UTC 2024 I: Preparing to do remote build '1' on ionos5-amd64.debian.net. Tue Nov 5 21:31:40 UTC 2024 I: Deleting $TMPDIR on ionos5-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Mon Dec 8 15:51:25 -12 2025 I: pbuilder-time-stamp: 1765252285 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [bitshuffle_0.5.1-2.dsc] I: copying [./bitshuffle_0.5.1.orig.tar.gz] I: copying [./bitshuffle_0.5.1-2.debian.tar.xz] I: Extracting source gpgv: Signature made Sun Sep 22 08:35:17 2024 gpgv: using RSA key D9B453B799B8830D945E6A0A5BF54E5E12B900BB gpgv: issuer "picca@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./bitshuffle_0.5.1-2.dsc: no acceptable signature found dpkg-source: info: extracting bitshuffle in bitshuffle-0.5.1 dpkg-source: info: unpacking bitshuffle_0.5.1.orig.tar.gz dpkg-source: info: unpacking bitshuffle_0.5.1-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 0003-use-the-system-liblzf.patch dpkg-source: info: applying 0005-use-the-system-lz4.patch dpkg-source: info: applying 0003-link-with-libzstd.patch dpkg-source: info: applying 0004-cython-and-setuptools-are-not-runtime-dependencies.patch dpkg-source: info: applying 0005-remove-march-and-mcpu-to-avoid-FTBFS.patch dpkg-source: info: applying gcc14.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3175437/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='b54efe1bfa4840fc98827f58d4a638f6' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='3175437' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.4qsuuh37/pbuilderrc_WYES --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.4qsuuh37/b1 --logfile b1/build.log bitshuffle_0.5.1-2.dsc' SUDO_GID='110' SUDO_UID='105' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://213.165.73.152:3128' I: uname -a Linux ionos5-amd64 6.10.11+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.10.11-1~bpo12+1 (2024-10-03) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin I: user script /srv/workspace/pbuilder/3175437/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: cython3, debhelper-compat (= 13), dh-exec, dh-python, dh-sequence-numpy3, dh-sequence-python3, hdf5-tools, libhdf5-mpi-dev, libhdf5-serial-dev, liblz4-dev, liblzf-dev, libzstd-dev, mpi-default-bin, pkg-config, pybuild-plugin-pyproject, python3-all-dev, python3-h5py, python3-h5py-mpi, python3-numpy, python3-pytest, python3-setuptools dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19968 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on cython3; however: Package cython3 is not installed. pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-exec; however: Package dh-exec is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-numpy3; however: Package dh-sequence-numpy3 is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on hdf5-tools; however: Package hdf5-tools is not installed. pbuilder-satisfydepends-dummy depends on libhdf5-mpi-dev; however: Package libhdf5-mpi-dev is not installed. pbuilder-satisfydepends-dummy depends on libhdf5-serial-dev; however: Package libhdf5-serial-dev is not installed. pbuilder-satisfydepends-dummy depends on liblz4-dev; however: Package liblz4-dev is not installed. pbuilder-satisfydepends-dummy depends on liblzf-dev; however: Package liblzf-dev is not installed. pbuilder-satisfydepends-dummy depends on libzstd-dev; however: Package libzstd-dev is not installed. pbuilder-satisfydepends-dummy depends on mpi-default-bin; however: Package mpi-default-bin is not installed. pbuilder-satisfydepends-dummy depends on pkg-config; however: Package pkg-config is not installed. pbuilder-satisfydepends-dummy depends on pybuild-plugin-pyproject; however: Package pybuild-plugin-pyproject is not installed. pbuilder-satisfydepends-dummy depends on python3-all-dev; however: Package python3-all-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-h5py; however: Package python3-h5py is not installed. pbuilder-satisfydepends-dummy depends on python3-h5py-mpi; however: Package python3-h5py-mpi is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy; however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cython3{a} debhelper{a} dh-autoreconf{a} dh-exec{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} gfortran-14{a} gfortran-14-x86-64-linux-gnu{a} groff-base{a} hdf5-helpers{a} hdf5-tools{a} ibverbs-providers{a} intltool-debian{a} libaec-dev{a} libaec0{a} libamd-comgr2{a} libamdhip64-5{a} libarchive-zip-perl{a} libblas3{a} libbrotli-dev{a} libbrotli1{a} libcbor0.10{a} libcom-err2{a} libcurl4-openssl-dev{a} libcurl4t64{a} libdebhelper-perl{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm2{a} libedit2{a} libelf1t64{a} libevent-2.1-7t64{a} libevent-core-2.1-7t64{a} libevent-dev{a} libevent-extra-2.1-7t64{a} libevent-openssl-2.1-7t64{a} libevent-pthreads-2.1-7t64{a} libexpat1{a} libexpat1-dev{a} libfabric1{a} libfido2-1{a} libfile-stripnondeterminism-perl{a} libgfortran-14-dev{a} libgfortran5{a} libgmp-dev{a} libgmpxx4ldbl{a} libgnutls-dane0t64{a} libgnutls-openssl27t64{a} libgnutls28-dev{a} libgssapi-krb5-2{a} libhdf5-103-1t64{a} libhdf5-cpp-103-1t64{a} libhdf5-dev{a} libhdf5-fortran-102t64{a} libhdf5-hl-100t64{a} libhdf5-hl-cpp-100t64{a} libhdf5-hl-fortran-100t64{a} libhdf5-mpi-dev{a} libhdf5-openmpi-103-1t64{a} libhdf5-openmpi-cpp-103-1t64{a} libhdf5-openmpi-dev{a} libhdf5-openmpi-fortran-102t64{a} libhdf5-openmpi-hl-100t64{a} libhdf5-openmpi-hl-cpp-100t64{a} libhdf5-openmpi-hl-fortran-100t64{a} libhsa-runtime64-1{a} libhsakmt1{a} libhwloc-dev{a} libhwloc-plugins{a} libhwloc15{a} libibmad5{a} libibumad3{a} libibverbs-dev{a} libibverbs1{a} libicu72{a} libidn2-dev{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-sphinxdoc{a} libjs-underscore{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} libldap-2.5-0{a} libllvm17t64{a} libltdl-dev{a} libltdl7{a} liblz4-dev{a} liblzf-dev{a} liblzf1{a} libmagic-mgc{a} libmagic1t64{a} libmunge2{a} libnghttp2-14{a} libnghttp2-dev{a} libnl-3-200{a} libnl-3-dev{a} libnl-route-3-200{a} libnl-route-3-dev{a} libnsl2{a} libnuma-dev{a} libnuma1{a} libopenmpi-dev{a} libopenmpi3t64{a} libp11-kit-dev{a} libpciaccess0{a} libpipeline1{a} libpkgconf3{a} libpmix-dev{a} libpmix2t64{a} libpsl-dev{a} libpsl5t64{a} libpsm-infinipath1{a} libpsm2-2{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.12-dev{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.12t64{a} librdmacm1t64{a} libreadline8t64{a} librtmp-dev{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1-dev{a} libssh2-1t64{a} libssl-dev{a} libsz2{a} libtasn1-6-dev{a} libtirpc-common{a} libtirpc3t64{a} libtool{a} libuchardet0{a} libucx0{a} libunbound8{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxml2{a} libxnvctrl0{a} libz3-4{a} libzstd-dev{a} m4{a} man-db{a} media-types{a} mpi-default-bin{a} mpi-default-dev{a} netbase{a} nettle-dev{a} ocl-icd-libopencl1{a} openmpi-bin{a} openmpi-common{a} openssh-client{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} pybuild-plugin-pyproject{a} python3{a} python3-all{a} python3-all-dev{a} python3-autocommand{a} python3-build{a} python3-dev{a} python3-h5py{a} python3-h5py-mpi{a} python3-h5py-serial{a} python3-inflect{a} python3-iniconfig{a} python3-installer{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-minimal{a} python3-more-itertools{a} python3-mpi4py{a} python3-numpy{a} python3-packaging{a} python3-pkg-resources{a} python3-pluggy{a} python3-pyproject-hooks{a} python3-pytest{a} python3-setuptools{a} python3-toml{a} python3-typeguard{a} python3-typing-extensions{a} python3-wheel{a} python3-zipp{a} python3.12{a} python3.12-dev{a} python3.12-minimal{a} readline-common{a} sensible-utils{a} tzdata{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl javascript-common krb5-locales libarchive-cpio-perl libcoarrays-openmpi-dev libldap-common libmail-sendmail-perl libsasl2-modules libtasn1-doc lynx publicsuffix python3-pygments wget xauth 0 packages upgraded, 214 newly installed, 0 to remove and 0 not upgraded. Need to get 157 MB of archives. After unpacking 649 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main amd64 libpython3.12-minimal amd64 3.12.7-2 [815 kB] Get: 2 http://deb.debian.org/debian unstable/main amd64 libexpat1 amd64 2.6.3-2 [105 kB] Get: 3 http://deb.debian.org/debian unstable/main amd64 python3.12-minimal amd64 3.12.7-2 [2161 kB] Get: 4 http://deb.debian.org/debian unstable/main amd64 python3-minimal amd64 3.12.6-1 [26.7 kB] Get: 5 http://deb.debian.org/debian unstable/main amd64 media-types all 10.1.0 [26.9 kB] Get: 6 http://deb.debian.org/debian unstable/main amd64 netbase all 6.4 [12.8 kB] Get: 7 http://deb.debian.org/debian unstable/main amd64 tzdata all 2024b-3 [255 kB] Get: 8 http://deb.debian.org/debian unstable/main amd64 libkrb5support0 amd64 1.21.3-3 [32.5 kB] Get: 9 http://deb.debian.org/debian unstable/main amd64 libcom-err2 amd64 1.47.1-1+b1 [23.2 kB] Get: 10 http://deb.debian.org/debian unstable/main amd64 libk5crypto3 amd64 1.21.3-3 [79.9 kB] Get: 11 http://deb.debian.org/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-4 [9092 B] Get: 12 http://deb.debian.org/debian unstable/main amd64 libkrb5-3 amd64 1.21.3-3 [324 kB] Get: 13 http://deb.debian.org/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.21.3-3 [136 kB] Get: 14 http://deb.debian.org/debian unstable/main amd64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get: 15 http://deb.debian.org/debian unstable/main amd64 libtirpc3t64 amd64 1.3.4+ds-1.3+b1 [83.1 kB] Get: 16 http://deb.debian.org/debian unstable/main amd64 libnsl2 amd64 1.3.0-3+b3 [40.6 kB] Get: 17 http://deb.debian.org/debian unstable/main amd64 readline-common all 8.2-5 [69.3 kB] Get: 18 http://deb.debian.org/debian unstable/main amd64 libreadline8t64 amd64 8.2-5 [169 kB] Get: 19 http://deb.debian.org/debian unstable/main amd64 libpython3.12-stdlib amd64 3.12.7-2 [1967 kB] Get: 20 http://deb.debian.org/debian unstable/main amd64 python3.12 amd64 3.12.7-2 [671 kB] Get: 21 http://deb.debian.org/debian unstable/main amd64 libpython3-stdlib amd64 3.12.6-1 [9692 B] Get: 22 http://deb.debian.org/debian unstable/main amd64 python3 amd64 3.12.6-1 [27.8 kB] Get: 23 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get: 24 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB] Get: 25 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB] Get: 26 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.45-3+b1 [43.3 kB] Get: 27 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.22.5-2 [200 kB] Get: 28 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get: 29 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-5 [1181 kB] Get: 30 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.40.2-10 [97.2 kB] Get: 31 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 32 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get: 33 http://deb.debian.org/debian unstable/main amd64 libedit2 amd64 3.1-20240808-1 [93.9 kB] Get: 34 http://deb.debian.org/debian unstable/main amd64 libcbor0.10 amd64 0.10.2-2 [28.3 kB] Get: 35 http://deb.debian.org/debian unstable/main amd64 libfido2-1 amd64 1.15.0-1+b1 [78.7 kB] Get: 36 http://deb.debian.org/debian unstable/main amd64 openssh-client amd64 1:9.9p1-3 [991 kB] Get: 37 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.19-4 [287 kB] Get: 38 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.72-3 [493 kB] Get: 39 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 40 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 41 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.22.5-2 [723 kB] Get: 42 http://deb.debian.org/debian unstable/main amd64 cython3 amd64 3.0.11+dfsg-1 [2449 kB] Get: 43 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.20 [89.7 kB] Get: 44 http://deb.debian.org/debian unstable/main amd64 libtool all 2.4.7-8 [517 kB] Get: 45 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 46 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 47 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 48 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 49 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get: 50 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 51 http://deb.debian.org/debian unstable/main amd64 libicu72 amd64 72.1-5+b1 [9423 kB] Get: 52 http://deb.debian.org/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.1 [699 kB] Get: 53 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.22.5-2 [1601 kB] Get: 54 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 55 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 56 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.20 [915 kB] Get: 57 http://deb.debian.org/debian unstable/main amd64 dh-exec amd64 0.30 [25.6 kB] Get: 58 http://deb.debian.org/debian unstable/main amd64 python3-autocommand all 2.2.2-3 [13.6 kB] Get: 59 http://deb.debian.org/debian unstable/main amd64 python3-more-itertools all 10.5.0-1 [63.8 kB] Get: 60 http://deb.debian.org/debian unstable/main amd64 python3-typing-extensions all 4.12.2-2 [73.0 kB] Get: 61 http://deb.debian.org/debian unstable/main amd64 python3-typeguard all 4.4.1-1 [37.0 kB] Get: 62 http://deb.debian.org/debian unstable/main amd64 python3-inflect all 7.3.1-2 [32.4 kB] Get: 63 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.context all 6.0.0-1 [7984 B] Get: 64 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 65 http://deb.debian.org/debian unstable/main amd64 python3-pkg-resources all 75.2.0-1 [213 kB] Get: 66 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.text all 4.0.0-1 [11.4 kB] Get: 67 http://deb.debian.org/debian unstable/main amd64 python3-zipp all 3.20.2-1 [10.3 kB] Get: 68 http://deb.debian.org/debian unstable/main amd64 python3-setuptools all 75.2.0-1 [731 kB] Get: 69 http://deb.debian.org/debian unstable/main amd64 dh-python all 6.20241024 [109 kB] Get: 70 http://deb.debian.org/debian unstable/main amd64 libgfortran5 amd64 14.2.0-8 [836 kB] Get: 71 http://deb.debian.org/debian unstable/main amd64 libgfortran-14-dev amd64 14.2.0-8 [878 kB] Get: 72 http://deb.debian.org/debian unstable/main amd64 gfortran-14-x86-64-linux-gnu amd64 14.2.0-8 [11.7 MB] Get: 73 http://deb.debian.org/debian unstable/main amd64 gfortran-14 amd64 14.2.0-8 [12.2 kB] Get: 74 http://deb.debian.org/debian unstable/main amd64 hdf5-helpers amd64 1.10.10+repack-4 [23.5 kB] Get: 75 http://deb.debian.org/debian unstable/main amd64 libbrotli1 amd64 1.1.0-2+b5 [307 kB] Get: 76 http://deb.debian.org/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-8 [19.6 kB] Get: 77 http://deb.debian.org/debian unstable/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-8 [57.3 kB] Get: 78 http://deb.debian.org/debian unstable/main amd64 libldap-2.5-0 amd64 2.5.18+dfsg-3+b1 [188 kB] Get: 79 http://deb.debian.org/debian unstable/main amd64 libnghttp2-14 amd64 1.64.0-1 [75.5 kB] Get: 80 http://deb.debian.org/debian unstable/main amd64 libpsl5t64 amd64 0.21.2-1.1+b1 [57.2 kB] Get: 81 http://deb.debian.org/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b5 [58.8 kB] Get: 82 http://deb.debian.org/debian unstable/main amd64 libssh2-1t64 amd64 1.11.1-1 [245 kB] Get: 83 http://deb.debian.org/debian unstable/main amd64 libcurl4t64 amd64 8.10.1-2 [352 kB] Get: 84 http://deb.debian.org/debian unstable/main amd64 libaec0 amd64 1.1.3-1+b1 [23.8 kB] Get: 85 http://deb.debian.org/debian unstable/main amd64 libsz2 amd64 1.1.3-1+b1 [8080 B] Get: 86 http://deb.debian.org/debian unstable/main amd64 libhdf5-103-1t64 amd64 1.10.10+repack-4 [1253 kB] Get: 87 http://deb.debian.org/debian unstable/main amd64 hdf5-tools amd64 1.10.10+repack-4 [454 kB] Get: 88 http://deb.debian.org/debian unstable/main amd64 libnl-3-200 amd64 3.7.0-0.3+b1 [59.4 kB] Get: 89 http://deb.debian.org/debian unstable/main amd64 libnl-route-3-200 amd64 3.7.0-0.3+b1 [182 kB] Get: 90 http://deb.debian.org/debian unstable/main amd64 libibverbs1 amd64 52.0-2+b1 [62.2 kB] Get: 91 http://deb.debian.org/debian unstable/main amd64 ibverbs-providers amd64 52.0-2+b1 [343 kB] Get: 92 http://deb.debian.org/debian unstable/main amd64 libaec-dev amd64 1.1.3-1+b1 [21.5 kB] Get: 93 http://deb.debian.org/debian unstable/main amd64 libz3-4 amd64 4.13.3-1 [8560 kB] Get: 94 http://deb.debian.org/debian unstable/main amd64 libllvm17t64 amd64 1:17.0.6-18 [23.6 MB] Get: 95 http://deb.debian.org/debian unstable/main amd64 libamd-comgr2 amd64 6.0+git20231212.4510c28+dfsg-3+b2 [13.0 MB] Get: 96 http://deb.debian.org/debian unstable/main amd64 libdrm-common all 2.4.123-1 [8084 B] Get: 97 http://deb.debian.org/debian unstable/main amd64 libdrm2 amd64 2.4.123-1 [38.7 kB] Get: 98 http://deb.debian.org/debian unstable/main amd64 libdrm-amdgpu1 amd64 2.4.123-1 [22.3 kB] Get: 99 http://deb.debian.org/debian unstable/main amd64 libnuma1 amd64 2.0.18-1+b1 [22.3 kB] Get: 100 http://deb.debian.org/debian unstable/main amd64 libhsakmt1 amd64 6.1.2+ds-1 [59.8 kB] Get: 101 http://deb.debian.org/debian unstable/main amd64 libhsa-runtime64-1 amd64 6.1.2-2 [535 kB] Get: 102 http://deb.debian.org/debian unstable/main amd64 libamdhip64-5 amd64 5.7.1-5 [8877 kB] Get: 103 http://deb.debian.org/debian unstable/main amd64 libblas3 amd64 3.12.0-3+b1 [152 kB] Get: 104 http://deb.debian.org/debian unstable/main amd64 libbrotli-dev amd64 1.1.0-2+b5 [316 kB] Get: 105 http://deb.debian.org/debian unstable/main amd64 libidn2-dev amd64 2.3.7-2+b1 [123 kB] Get: 106 http://deb.debian.org/debian unstable/main amd64 libpkgconf3 amd64 1.8.1-4 [36.4 kB] Get: 107 http://deb.debian.org/debian unstable/main amd64 pkgconf-bin amd64 1.8.1-4 [30.2 kB] Get: 108 http://deb.debian.org/debian unstable/main amd64 pkgconf amd64 1.8.1-4 [26.2 kB] Get: 109 http://deb.debian.org/debian unstable/main amd64 libnghttp2-dev amd64 1.64.0-1 [115 kB] Get: 110 http://deb.debian.org/debian unstable/main amd64 libpsl-dev amd64 0.21.2-1.1+b1 [77.6 kB] Get: 111 http://deb.debian.org/debian unstable/main amd64 libgmpxx4ldbl amd64 2:6.3.0+dfsg-2+b2 [329 kB] Get: 112 http://deb.debian.org/debian unstable/main amd64 libgmp-dev amd64 2:6.3.0+dfsg-2+b2 [642 kB] Get: 113 http://deb.debian.org/debian unstable/main amd64 libevent-2.1-7t64 amd64 2.1.12-stable-10+b1 [182 kB] Get: 114 http://deb.debian.org/debian unstable/main amd64 libunbound8 amd64 1.22.0-1 [598 kB] Get: 115 http://deb.debian.org/debian unstable/main amd64 libgnutls-dane0t64 amd64 3.8.6-2+b1 [439 kB] Get: 116 http://deb.debian.org/debian unstable/main amd64 libgnutls-openssl27t64 amd64 3.8.6-2+b1 [439 kB] Get: 117 http://deb.debian.org/debian unstable/main amd64 libp11-kit-dev amd64 0.25.5-2+b1 [208 kB] Get: 118 http://deb.debian.org/debian unstable/main amd64 libtasn1-6-dev amd64 4.19.0-3+b3 [98.9 kB] Get: 119 http://deb.debian.org/debian unstable/main amd64 nettle-dev amd64 3.10-1+b1 [1317 kB] Get: 120 http://deb.debian.org/debian unstable/main amd64 libgnutls28-dev amd64 3.8.6-2+b1 [1385 kB] Get: 121 http://deb.debian.org/debian unstable/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1+b1 [920 kB] Get: 122 http://deb.debian.org/debian unstable/main amd64 librtmp-dev amd64 2.4+20151223.gitfa8646d.1-2+b5 [68.0 kB] Get: 123 http://deb.debian.org/debian unstable/main amd64 libssl-dev amd64 3.3.2-2 [2742 kB] Get: 124 http://deb.debian.org/debian unstable/main amd64 libssh2-1-dev amd64 1.11.1-1 [393 kB] Get: 125 http://deb.debian.org/debian unstable/main amd64 libzstd-dev amd64 1.5.6+dfsg-1+b1 [365 kB] Get: 126 http://deb.debian.org/debian unstable/main amd64 libcurl4-openssl-dev amd64 8.10.1-2 [462 kB] Get: 127 http://deb.debian.org/debian unstable/main amd64 libevent-core-2.1-7t64 amd64 2.1.12-stable-10+b1 [132 kB] Get: 128 http://deb.debian.org/debian unstable/main amd64 libevent-extra-2.1-7t64 amd64 2.1.12-stable-10+b1 [108 kB] Get: 129 http://deb.debian.org/debian unstable/main amd64 libevent-pthreads-2.1-7t64 amd64 2.1.12-stable-10+b1 [54.3 kB] Get: 130 http://deb.debian.org/debian unstable/main amd64 libevent-openssl-2.1-7t64 amd64 2.1.12-stable-10+b1 [61.1 kB] Get: 131 http://deb.debian.org/debian unstable/main amd64 libevent-dev amd64 2.1.12-stable-10+b1 [305 kB] Get: 132 http://deb.debian.org/debian unstable/main amd64 libexpat1-dev amd64 2.6.3-2 [157 kB] Get: 133 http://deb.debian.org/debian unstable/main amd64 libpsm-infinipath1 amd64 3.3+20.604758e7-6.3 [170 kB] Get: 134 http://deb.debian.org/debian unstable/main amd64 libpsm2-2 amd64 11.2.185-2.1 [181 kB] Get: 135 http://deb.debian.org/debian unstable/main amd64 librdmacm1t64 amd64 52.0-2+b1 [70.4 kB] Get: 136 http://deb.debian.org/debian unstable/main amd64 libfabric1 amd64 1.17.0-3.1 [631 kB] Get: 137 http://deb.debian.org/debian unstable/main amd64 libhdf5-cpp-103-1t64 amd64 1.10.10+repack-4 [130 kB] Get: 138 http://deb.debian.org/debian unstable/main amd64 libhdf5-fortran-102t64 amd64 1.10.10+repack-4 [89.5 kB] Get: 139 http://deb.debian.org/debian unstable/main amd64 libhdf5-hl-100t64 amd64 1.10.10+repack-4 [63.9 kB] Get: 140 http://deb.debian.org/debian unstable/main amd64 libhdf5-hl-fortran-100t64 amd64 1.10.10+repack-4 [40.5 kB] Get: 141 http://deb.debian.org/debian unstable/main amd64 libhdf5-hl-cpp-100t64 amd64 1.10.10+repack-4 [21.4 kB] Get: 142 http://deb.debian.org/debian unstable/main amd64 libjpeg62-turbo amd64 1:2.1.5-3+b1 [168 kB] Get: 143 http://deb.debian.org/debian unstable/main amd64 libjpeg62-turbo-dev amd64 1:2.1.5-3+b1 [292 kB] Get: 144 http://deb.debian.org/debian unstable/main amd64 libjpeg-dev amd64 1:2.1.5-3+b1 [72.2 kB] Get: 145 http://deb.debian.org/debian unstable/main amd64 libhdf5-dev amd64 1.10.10+repack-4 [2652 kB] Get: 146 http://deb.debian.org/debian unstable/main amd64 libhwloc15 amd64 2.11.2-1 [164 kB] Get: 147 http://deb.debian.org/debian unstable/main amd64 libmunge2 amd64 0.5.15-4+b1 [20.0 kB] Get: 148 http://deb.debian.org/debian unstable/main amd64 libpciaccess0 amd64 0.17-3+b2 [51.9 kB] Get: 149 http://deb.debian.org/debian unstable/main amd64 libxau6 amd64 1:1.0.11-1 [20.4 kB] Get: 150 http://deb.debian.org/debian unstable/main amd64 libxdmcp6 amd64 1:1.1.2-3+b2 [24.4 kB] Get: 151 http://deb.debian.org/debian unstable/main amd64 libxcb1 amd64 1.17.0-2+b1 [144 kB] Get: 152 http://deb.debian.org/debian unstable/main amd64 libx11-data all 2:1.8.10-1 [337 kB] Get: 153 http://deb.debian.org/debian unstable/main amd64 libx11-6 amd64 2:1.8.10-1 [813 kB] Get: 154 http://deb.debian.org/debian unstable/main amd64 libxext6 amd64 2:1.3.4-1+b2 [50.5 kB] Get: 155 http://deb.debian.org/debian unstable/main amd64 libxnvctrl0 amd64 535.171.04-1+b1 [14.2 kB] Get: 156 http://deb.debian.org/debian unstable/main amd64 ocl-icd-libopencl1 amd64 2.3.2-1+b2 [40.2 kB] Get: 157 http://deb.debian.org/debian unstable/main amd64 libhwloc-plugins amd64 2.11.2-1 [18.1 kB] Get: 158 http://deb.debian.org/debian unstable/main amd64 libpmix2t64 amd64 5.0.3-2+b1 [662 kB] Get: 159 http://deb.debian.org/debian unstable/main amd64 libibumad3 amd64 52.0-2+b1 [28.2 kB] Get: 160 http://deb.debian.org/debian unstable/main amd64 libibmad5 amd64 52.0-2+b1 [43.4 kB] Get: 161 http://deb.debian.org/debian unstable/main amd64 libucx0 amd64 1.17.0+ds-3 [1130 kB] Get: 162 http://deb.debian.org/debian unstable/main amd64 libopenmpi3t64 amd64 5.0.5-3 [2007 kB] Get: 163 http://deb.debian.org/debian unstable/main amd64 libhdf5-openmpi-103-1t64 amd64 1.10.10+repack-4 [1312 kB] Get: 164 http://deb.debian.org/debian unstable/main amd64 libhdf5-openmpi-fortran-102t64 amd64 1.10.10+repack-4 [90.7 kB] Get: 165 http://deb.debian.org/debian unstable/main amd64 libhdf5-openmpi-hl-100t64 amd64 1.10.10+repack-4 [63.9 kB] Get: 166 http://deb.debian.org/debian unstable/main amd64 libhdf5-openmpi-hl-fortran-100t64 amd64 1.10.10+repack-4 [40.7 kB] Get: 167 http://deb.debian.org/debian unstable/main amd64 libhdf5-openmpi-cpp-103-1t64 amd64 1.10.10+repack-4 [131 kB] Get: 168 http://deb.debian.org/debian unstable/main amd64 libhdf5-openmpi-hl-cpp-100t64 amd64 1.10.10+repack-4 [21.4 kB] Get: 169 http://deb.debian.org/debian unstable/main amd64 openmpi-common all 5.0.5-3 [95.0 kB] Get: 170 http://deb.debian.org/debian unstable/main amd64 libnl-3-dev amd64 3.7.0-0.3+b1 [100 kB] Get: 171 http://deb.debian.org/debian unstable/main amd64 libnl-route-3-dev amd64 3.7.0-0.3+b1 [200 kB] Get: 172 http://deb.debian.org/debian unstable/main amd64 libibverbs-dev amd64 52.0-2+b1 [636 kB] Get: 173 http://deb.debian.org/debian unstable/main amd64 libnuma-dev amd64 2.0.18-1+b1 [36.6 kB] Get: 174 http://deb.debian.org/debian unstable/main amd64 libltdl7 amd64 2.4.7-8 [393 kB] Get: 175 http://deb.debian.org/debian unstable/main amd64 libltdl-dev amd64 2.4.7-8 [165 kB] Get: 176 http://deb.debian.org/debian unstable/main amd64 libhwloc-dev amd64 2.11.2-1 [254 kB] Get: 177 http://deb.debian.org/debian unstable/main amd64 libpmix-dev amd64 5.0.3-2+b1 [3958 kB] Get: 178 http://deb.debian.org/debian unstable/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 179 http://deb.debian.org/debian unstable/main amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get: 180 http://deb.debian.org/debian unstable/main amd64 openmpi-bin amd64 5.0.5-3 [168 kB] Get: 181 http://deb.debian.org/debian unstable/main amd64 libopenmpi-dev amd64 5.0.5-3 [1087 kB] Get: 182 http://deb.debian.org/debian unstable/main amd64 libhdf5-openmpi-dev amd64 1.10.10+repack-4 [2717 kB] Get: 183 http://deb.debian.org/debian unstable/main amd64 mpi-default-dev amd64 1.17 [3148 B] Get: 184 http://deb.debian.org/debian unstable/main amd64 libhdf5-mpi-dev amd64 1.10.10+repack-4 [15.6 kB] Get: 185 http://deb.debian.org/debian unstable/main amd64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 186 http://deb.debian.org/debian unstable/main amd64 libjs-sphinxdoc all 7.4.7-4 [158 kB] Get: 187 http://deb.debian.org/debian unstable/main amd64 liblapack3 amd64 3.12.0-3+b1 [2450 kB] Get: 188 http://deb.debian.org/debian unstable/main amd64 liblz4-dev amd64 1.9.4-3+b1 [83.2 kB] Get: 189 http://deb.debian.org/debian unstable/main amd64 liblzf1 amd64 3.6-4+b2 [10.1 kB] Get: 190 http://deb.debian.org/debian unstable/main amd64 liblzf-dev amd64 3.6-4+b2 [18.6 kB] Get: 191 http://deb.debian.org/debian unstable/main amd64 libpython3.12t64 amd64 3.12.7-2 [2150 kB] Get: 192 http://deb.debian.org/debian unstable/main amd64 libpython3.12-dev amd64 3.12.7-2 [5125 kB] Get: 193 http://deb.debian.org/debian unstable/main amd64 libpython3-dev amd64 3.12.6-1 [9952 B] Get: 194 http://deb.debian.org/debian unstable/main amd64 libpython3-all-dev amd64 3.12.6-1 [1064 B] Get: 195 http://deb.debian.org/debian unstable/main amd64 mpi-default-bin amd64 1.17 [2372 B] Get: 196 http://deb.debian.org/debian unstable/main amd64 python3-packaging all 24.1-1 [45.8 kB] Get: 197 http://deb.debian.org/debian unstable/main amd64 python3-pyproject-hooks all 1.2.0-1 [11.7 kB] Get: 198 http://deb.debian.org/debian unstable/main amd64 python3-toml all 0.10.2-1 [16.2 kB] Get: 199 http://deb.debian.org/debian unstable/main amd64 python3-wheel all 0.44.0-2 [53.4 kB] Get: 200 http://deb.debian.org/debian unstable/main amd64 python3-build all 1.2.2-1 [36.0 kB] Get: 201 http://deb.debian.org/debian unstable/main amd64 python3-installer all 0.7.0+dfsg1-3 [18.6 kB] Get: 202 http://deb.debian.org/debian unstable/main amd64 pybuild-plugin-pyproject all 6.20241024 [11.4 kB] Get: 203 http://deb.debian.org/debian unstable/main amd64 python3-all amd64 3.12.6-1 [1040 B] Get: 204 http://deb.debian.org/debian unstable/main amd64 python3.12-dev amd64 3.12.7-2 [505 kB] Get: 205 http://deb.debian.org/debian unstable/main amd64 python3-dev amd64 3.12.6-1 [26.1 kB] Get: 206 http://deb.debian.org/debian unstable/main amd64 python3-all-dev amd64 3.12.6-1 [1068 B] Get: 207 http://deb.debian.org/debian unstable/main amd64 python3-numpy amd64 1:1.26.4+ds-11 [4236 kB] Get: 208 http://deb.debian.org/debian unstable/main amd64 python3-h5py-serial amd64 3.11.0-7 [1018 kB] Get: 209 http://deb.debian.org/debian unstable/main amd64 python3-mpi4py amd64 4.0.0-8 [743 kB] Get: 210 http://deb.debian.org/debian unstable/main amd64 python3-h5py-mpi amd64 3.11.0-7 [1024 kB] Get: 211 http://deb.debian.org/debian unstable/main amd64 python3-h5py all 3.11.0-7 [14.8 kB] Get: 212 http://deb.debian.org/debian unstable/main amd64 python3-iniconfig all 1.1.1-2 [6396 B] Get: 213 http://deb.debian.org/debian unstable/main amd64 python3-pluggy all 1.5.0-1 [26.9 kB] Get: 214 http://deb.debian.org/debian unstable/main amd64 python3-pytest all 8.3.3-1 [249 kB] Fetched 157 MB in 14s (11.3 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.12-minimal:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19968 files and directories currently installed.) Preparing to unpack .../libpython3.12-minimal_3.12.7-2_amd64.deb ... Unpacking libpython3.12-minimal:amd64 (3.12.7-2) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../libexpat1_2.6.3-2_amd64.deb ... Unpacking libexpat1:amd64 (2.6.3-2) ... Selecting previously unselected package python3.12-minimal. 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Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3 to /lib/x86_64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3.0.0 to /lib/x86_64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Unpacking libtirpc3t64:amd64 (1.3.4+ds-1.3+b1) ... Selecting previously unselected package libnsl2:amd64. Preparing to unpack .../12-libnsl2_1.3.0-3+b3_amd64.deb ... Unpacking libnsl2:amd64 (1.3.0-3+b3) ... Selecting previously unselected package readline-common. Preparing to unpack .../13-readline-common_8.2-5_all.deb ... Unpacking readline-common (8.2-5) ... Selecting previously unselected package libreadline8t64:amd64. Preparing to unpack .../14-libreadline8t64_8.2-5_amd64.deb ... 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Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/bitshuffle-0.5.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../bitshuffle_0.5.1-2_source.changes dpkg-buildpackage: info: source package bitshuffle dpkg-buildpackage: info: source version 0.5.1-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Picca Frédéric-Emmanuel dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --buildsystem=pybuild debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/bitshuffle-0.5.1' rm -rf lzf/lzf rm -rf lz4 dh_auto_clean pybuild --clean -i python{version} -p 3.12 rm -rf .pybuild/ find . -name \*.pyc -exec rm {} \; make[1]: Leaving directory '/build/reproducible-path/bitshuffle-0.5.1' dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/bitshuffle.substvars debian/files rm -fr -- debian/bitshuffle/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \) debian/rules binary dh binary --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild pybuild --configure -i python{version} -p 3.12 debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/bitshuffle-0.5.1' CC=mpicc dh_auto_build pybuild --build -i python{version} -p 3.12 I: pybuild plugin_pyproject:129: Building wheel for python3.12 with "build" module I: pybuild base:311: python3.12 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/reproducible-path/bitshuffle-0.5.1/.pybuild/cpython3_3.12_bitshuffle * Building wheel... running bdist_wheel running build running build_py creating build/lib.linux-x86_64-cpython-312/bitshuffle copying bitshuffle/__init__.py -> build/lib.linux-x86_64-cpython-312/bitshuffle running build_ext /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/bitshuffle-0.5.1/bitshuffle/ext.pyx tree = Parsing.p_module(s, pxd, full_module_name) warning: bitshuffle/ext.pyx:37:4: The 'IF' statement is deprecated and will be removed in a future Cython version. Consider using runtime conditions or C macros instead. See https://github.com/cython/cython/issues/4310 warning: bitshuffle/ext.pyx:50:0: The 'IF' statement is deprecated and will be removed in a future Cython version. Consider using runtime conditions or C macros instead. See https://github.com/cython/cython/issues/4310 warning: bitshuffle/ext.pyx:492:0: The 'IF' statement is deprecated and will be removed in a future Cython version. Consider using runtime conditions or C macros instead. See https://github.com/cython/cython/issues/4310 /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/bitshuffle-0.5.1/bitshuffle/h5.pyx tree = Parsing.p_module(s, pxd, full_module_name) warning: bitshuffle/h5.pyx:85:30: Obtaining 'const char *' from externally modifiable global Python value Compiling bitshuffle/ext.pyx because it changed. Compiling bitshuffle/h5.pyx because it changed. [1/2] Cythonizing bitshuffle/ext.pyx [2/2] Cythonizing bitshuffle/h5.pyx ################################# # Compiling with OpenMP support # ################################# building 'bitshuffle.ext' extension creating build/temp.linux-x86_64-cpython-312/bitshuffle creating build/temp.linux-x86_64-cpython-312/src mpicc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/bitshuffle-0.5.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DBSHUF_VERSION_MAJOR=0 -DBSHUF_VERSION_MINOR=5 -DBSHUF_VERSION_POINT=1 -DZSTD_SUPPORT=1 -DZSTD_SUPPORT=1 -Isrc/ -Izstd/lib/ -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c bitshuffle/ext.c -o build/temp.linux-x86_64-cpython-312/bitshuffle/ext.o -ffast-math -fopenmp -fno-strict-aliasing -O3 -std=c99 -fPIC In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5, from bitshuffle/ext.c:1284: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ mpicc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/bitshuffle-0.5.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DBSHUF_VERSION_MAJOR=0 -DBSHUF_VERSION_MINOR=5 -DBSHUF_VERSION_POINT=1 -DZSTD_SUPPORT=1 -DZSTD_SUPPORT=1 -Isrc/ -Izstd/lib/ -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c src/bitshuffle.c -o build/temp.linux-x86_64-cpython-312/src/bitshuffle.o -ffast-math -fopenmp -fno-strict-aliasing -O3 -std=c99 -fPIC src/bitshuffle.c: In function 'bshuf_decompress_lz4_block': src/bitshuffle.c:102:16: warning: comparison of integer expressions of different signedness: 'int64_t' {aka 'long int'} and 'size_t' {aka 'long unsigned int'} [-Wsign-compare] 102 | if (nbytes != size * elem_size) { | ^~ src/bitshuffle.c: In function 'bshuf_decompress_zstd_block': src/bitshuffle.c:187:16: warning: comparison of integer expressions of different signedness: 'int64_t' {aka 'long int'} and 'size_t' {aka 'long unsigned int'} [-Wsign-compare] 187 | if (nbytes != size * elem_size) { | ^~ mpicc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/bitshuffle-0.5.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DBSHUF_VERSION_MAJOR=0 -DBSHUF_VERSION_MINOR=5 -DBSHUF_VERSION_POINT=1 -DZSTD_SUPPORT=1 -DZSTD_SUPPORT=1 -Isrc/ -Izstd/lib/ -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c src/bitshuffle_core.c -o build/temp.linux-x86_64-cpython-312/src/bitshuffle_core.o -ffast-math -fopenmp -fno-strict-aliasing -O3 -std=c99 -fPIC mpicc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/bitshuffle-0.5.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DBSHUF_VERSION_MAJOR=0 -DBSHUF_VERSION_MINOR=5 -DBSHUF_VERSION_POINT=1 -DZSTD_SUPPORT=1 -DZSTD_SUPPORT=1 -Isrc/ -Izstd/lib/ -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c src/iochain.c -o build/temp.linux-x86_64-cpython-312/src/iochain.o -ffast-math -fopenmp -fno-strict-aliasing -O3 -std=c99 -fPIC mpicc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/bitshuffle-0.5.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-312/bitshuffle/ext.o build/temp.linux-x86_64-cpython-312/src/bitshuffle.o build/temp.linux-x86_64-cpython-312/src/bitshuffle_core.o build/temp.linux-x86_64-cpython-312/src/iochain.o -L/usr/lib/x86_64-linux-gnu -llz4 -lzstd -o build/lib.linux-x86_64-cpython-312/bitshuffle/ext.cpython-312-x86_64-linux-gnu.so -fopenmp building 'bitshuffle.h5' extension mpicc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/bitshuffle-0.5.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DBSHUF_VERSION_MAJOR=0 -DBSHUF_VERSION_MINOR=5 -DBSHUF_VERSION_POINT=1 -DH5_USE_18_API -DZSTD_SUPPORT=1 -Isrc/ -I/usr/include/hdf5/openmpi -I/usr/lib/x86_64-linux-gnu/fortran/gfortran-mod-15/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -Izstd/lib/ -I/usr/include/python3.12 -c bitshuffle/h5.c -o build/temp.linux-x86_64-cpython-312/bitshuffle/h5.o -ffast-math -fopenmp -fno-strict-aliasing -O3 -std=c99 -fPIC mpicc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/bitshuffle-0.5.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DBSHUF_VERSION_MAJOR=0 -DBSHUF_VERSION_MINOR=5 -DBSHUF_VERSION_POINT=1 -DH5_USE_18_API -DZSTD_SUPPORT=1 -Isrc/ -I/usr/include/hdf5/openmpi -I/usr/lib/x86_64-linux-gnu/fortran/gfortran-mod-15/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -Izstd/lib/ -I/usr/include/python3.12 -c src/bitshuffle.c -o build/temp.linux-x86_64-cpython-312/src/bitshuffle.o -ffast-math -fopenmp -fno-strict-aliasing -O3 -std=c99 -fPIC src/bitshuffle.c: In function 'bshuf_decompress_lz4_block': src/bitshuffle.c:102:16: warning: comparison of integer expressions of different signedness: 'int64_t' {aka 'long int'} and 'size_t' {aka 'long unsigned int'} [-Wsign-compare] 102 | if (nbytes != size * elem_size) { | ^~ src/bitshuffle.c: In function 'bshuf_decompress_zstd_block': src/bitshuffle.c:187:16: warning: comparison of integer expressions of different signedness: 'int64_t' {aka 'long int'} and 'size_t' {aka 'long unsigned int'} [-Wsign-compare] 187 | if (nbytes != size * elem_size) { | ^~ mpicc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/bitshuffle-0.5.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DBSHUF_VERSION_MAJOR=0 -DBSHUF_VERSION_MINOR=5 -DBSHUF_VERSION_POINT=1 -DH5_USE_18_API -DZSTD_SUPPORT=1 -Isrc/ -I/usr/include/hdf5/openmpi -I/usr/lib/x86_64-linux-gnu/fortran/gfortran-mod-15/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -Izstd/lib/ -I/usr/include/python3.12 -c src/bitshuffle_core.c -o build/temp.linux-x86_64-cpython-312/src/bitshuffle_core.o -ffast-math -fopenmp -fno-strict-aliasing -O3 -std=c99 -fPIC mpicc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/bitshuffle-0.5.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DBSHUF_VERSION_MAJOR=0 -DBSHUF_VERSION_MINOR=5 -DBSHUF_VERSION_POINT=1 -DH5_USE_18_API -DZSTD_SUPPORT=1 -Isrc/ -I/usr/include/hdf5/openmpi -I/usr/lib/x86_64-linux-gnu/fortran/gfortran-mod-15/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -Izstd/lib/ -I/usr/include/python3.12 -c src/bshuf_h5filter.c -o build/temp.linux-x86_64-cpython-312/src/bshuf_h5filter.o -ffast-math -fopenmp -fno-strict-aliasing -O3 -std=c99 -fPIC mpicc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/bitshuffle-0.5.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DBSHUF_VERSION_MAJOR=0 -DBSHUF_VERSION_MINOR=5 -DBSHUF_VERSION_POINT=1 -DH5_USE_18_API -DZSTD_SUPPORT=1 -Isrc/ -I/usr/include/hdf5/openmpi -I/usr/lib/x86_64-linux-gnu/fortran/gfortran-mod-15/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -Izstd/lib/ -I/usr/include/python3.12 -c src/hdf5_dl.c -o build/temp.linux-x86_64-cpython-312/src/hdf5_dl.o -ffast-math -fopenmp -fno-strict-aliasing -O3 -std=c99 -fPIC mpicc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/bitshuffle-0.5.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DBSHUF_VERSION_MAJOR=0 -DBSHUF_VERSION_MINOR=5 -DBSHUF_VERSION_POINT=1 -DH5_USE_18_API -DZSTD_SUPPORT=1 -Isrc/ -I/usr/include/hdf5/openmpi -I/usr/lib/x86_64-linux-gnu/fortran/gfortran-mod-15/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -Izstd/lib/ -I/usr/include/python3.12 -c src/iochain.c -o build/temp.linux-x86_64-cpython-312/src/iochain.o -ffast-math -fopenmp -fno-strict-aliasing -O3 -std=c99 -fPIC mpicc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/bitshuffle-0.5.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-312/bitshuffle/h5.o build/temp.linux-x86_64-cpython-312/src/bitshuffle.o build/temp.linux-x86_64-cpython-312/src/bitshuffle_core.o build/temp.linux-x86_64-cpython-312/src/bshuf_h5filter.o build/temp.linux-x86_64-cpython-312/src/hdf5_dl.o build/temp.linux-x86_64-cpython-312/src/iochain.o -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -L/usr/lib/x86_64-linux-gnu -lmpi -llz4 -lzstd -o build/lib.linux-x86_64-cpython-312/bitshuffle/h5.cpython-312-x86_64-linux-gnu.so -fopenmp building 'bitshuffle.plugin.libh5bshuf' extension mpicc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/bitshuffle-0.5.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DBSHUF_VERSION_MAJOR=0 -DBSHUF_VERSION_MINOR=5 -DBSHUF_VERSION_POINT=1 -DZSTD_SUPPORT=1 -DZSTD_SUPPORT=1 -Isrc/ -I/usr/include/hdf5/openmpi -I/usr/lib/x86_64-linux-gnu/fortran/gfortran-mod-15/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -Izstd/lib/ -I/usr/include/python3.12 -c src/bitshuffle.c -o build/temp.linux-x86_64-cpython-312/src/bitshuffle.o -ffast-math -fopenmp -fno-strict-aliasing -O3 -std=c99 -fPIC src/bitshuffle.c: In function 'bshuf_decompress_lz4_block': src/bitshuffle.c:102:16: warning: comparison of integer expressions of different signedness: 'int64_t' {aka 'long int'} and 'size_t' {aka 'long unsigned int'} [-Wsign-compare] 102 | if (nbytes != size * elem_size) { | ^~ src/bitshuffle.c: In function 'bshuf_decompress_zstd_block': src/bitshuffle.c:187:16: warning: comparison of integer expressions of different signedness: 'int64_t' {aka 'long int'} and 'size_t' {aka 'long unsigned int'} [-Wsign-compare] 187 | if (nbytes != size * elem_size) { | ^~ mpicc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/bitshuffle-0.5.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DBSHUF_VERSION_MAJOR=0 -DBSHUF_VERSION_MINOR=5 -DBSHUF_VERSION_POINT=1 -DZSTD_SUPPORT=1 -DZSTD_SUPPORT=1 -Isrc/ -I/usr/include/hdf5/openmpi -I/usr/lib/x86_64-linux-gnu/fortran/gfortran-mod-15/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -Izstd/lib/ -I/usr/include/python3.12 -c src/bitshuffle_core.c -o build/temp.linux-x86_64-cpython-312/src/bitshuffle_core.o -ffast-math -fopenmp -fno-strict-aliasing -O3 -std=c99 -fPIC mpicc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/bitshuffle-0.5.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DBSHUF_VERSION_MAJOR=0 -DBSHUF_VERSION_MINOR=5 -DBSHUF_VERSION_POINT=1 -DZSTD_SUPPORT=1 -DZSTD_SUPPORT=1 -Isrc/ -I/usr/include/hdf5/openmpi -I/usr/lib/x86_64-linux-gnu/fortran/gfortran-mod-15/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -Izstd/lib/ -I/usr/include/python3.12 -c src/bshuf_h5filter.c -o build/temp.linux-x86_64-cpython-312/src/bshuf_h5filter.o -ffast-math -fopenmp -fno-strict-aliasing -O3 -std=c99 -fPIC mpicc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/bitshuffle-0.5.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DBSHUF_VERSION_MAJOR=0 -DBSHUF_VERSION_MINOR=5 -DBSHUF_VERSION_POINT=1 -DZSTD_SUPPORT=1 -DZSTD_SUPPORT=1 -Isrc/ -I/usr/include/hdf5/openmpi -I/usr/lib/x86_64-linux-gnu/fortran/gfortran-mod-15/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -Izstd/lib/ -I/usr/include/python3.12 -c src/bshuf_h5plugin.c -o build/temp.linux-x86_64-cpython-312/src/bshuf_h5plugin.o -ffast-math -fopenmp -fno-strict-aliasing -O3 -std=c99 -fPIC mpicc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/bitshuffle-0.5.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DBSHUF_VERSION_MAJOR=0 -DBSHUF_VERSION_MINOR=5 -DBSHUF_VERSION_POINT=1 -DZSTD_SUPPORT=1 -DZSTD_SUPPORT=1 -Isrc/ -I/usr/include/hdf5/openmpi -I/usr/lib/x86_64-linux-gnu/fortran/gfortran-mod-15/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -Izstd/lib/ -I/usr/include/python3.12 -c src/iochain.c -o build/temp.linux-x86_64-cpython-312/src/iochain.o -ffast-math -fopenmp -fno-strict-aliasing -O3 -std=c99 -fPIC creating build/lib.linux-x86_64-cpython-312/bitshuffle/plugin mpicc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/bitshuffle-0.5.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-312/src/bitshuffle.o build/temp.linux-x86_64-cpython-312/src/bitshuffle_core.o build/temp.linux-x86_64-cpython-312/src/bshuf_h5filter.o build/temp.linux-x86_64-cpython-312/src/bshuf_h5plugin.o build/temp.linux-x86_64-cpython-312/src/iochain.o -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -L/usr/lib/x86_64-linux-gnu -lhdf5 -lmpi -llz4 -lzstd -o build/lib.linux-x86_64-cpython-312/bitshuffle/plugin/libh5bshuf.cpython-312-x86_64-linux-gnu.so -fopenmp building 'bitshuffle.plugin.libh5LZF' extension creating build/temp.linux-x86_64-cpython-312/lzf mpicc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/bitshuffle-0.5.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Ilzf/ -I/usr/include/hdf5/openmpi -I/usr/lib/x86_64-linux-gnu/fortran/gfortran-mod-15/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/include/liblzf -I/usr/include/python3.12 -c lzf/lzf_filter.c -o build/temp.linux-x86_64-cpython-312/lzf/lzf_filter.o -ffast-math -fopenmp -fno-strict-aliasing -O3 -std=c99 -fPIC mpicc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/bitshuffle-0.5.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Ilzf/ -I/usr/include/hdf5/openmpi -I/usr/lib/x86_64-linux-gnu/fortran/gfortran-mod-15/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -I/usr/include/liblzf -I/usr/include/python3.12 -c src/lzf_h5plugin.c -o build/temp.linux-x86_64-cpython-312/src/lzf_h5plugin.o -ffast-math -fopenmp -fno-strict-aliasing -O3 -std=c99 -fPIC mpicc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/bitshuffle-0.5.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-312/lzf/lzf_filter.o build/temp.linux-x86_64-cpython-312/src/lzf_h5plugin.o -L/usr/lib/x86_64-linux-gnu/hdf5/openmpi -L/usr/lib/x86_64-linux-gnu/openmpi/lib -L/usr/lib/x86_64-linux-gnu -lhdf5 -lmpi -llzf -o build/lib.linux-x86_64-cpython-312/bitshuffle/plugin/libh5LZF.cpython-312-x86_64-linux-gnu.so -fopenmp installing to build/bdist.linux-x86_64/wheel running install running install_lib creating build/bdist.linux-x86_64/wheel creating build/bdist.linux-x86_64/wheel/bitshuffle copying build/lib.linux-x86_64-cpython-312/bitshuffle/h5.cpython-312-x86_64-linux-gnu.so -> build/bdist.linux-x86_64/wheel/./bitshuffle copying build/lib.linux-x86_64-cpython-312/bitshuffle/ext.cpython-312-x86_64-linux-gnu.so -> build/bdist.linux-x86_64/wheel/./bitshuffle copying build/lib.linux-x86_64-cpython-312/bitshuffle/__init__.py -> build/bdist.linux-x86_64/wheel/./bitshuffle creating build/bdist.linux-x86_64/wheel/bitshuffle/plugin copying build/lib.linux-x86_64-cpython-312/bitshuffle/plugin/libh5bshuf.cpython-312-x86_64-linux-gnu.so -> build/bdist.linux-x86_64/wheel/./bitshuffle/plugin copying build/lib.linux-x86_64-cpython-312/bitshuffle/plugin/libh5LZF.cpython-312-x86_64-linux-gnu.so -> build/bdist.linux-x86_64/wheel/./bitshuffle/plugin running install_egg_info running egg_info creating bitshuffle.egg-info writing bitshuffle.egg-info/PKG-INFO writing dependency_links to bitshuffle.egg-info/dependency_links.txt writing requirements to bitshuffle.egg-info/requires.txt writing top-level names to bitshuffle.egg-info/top_level.txt writing manifest file 'bitshuffle.egg-info/SOURCES.txt' dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency zstd/lib/zstd.h won't be automatically included in the manifest: the path doesn't exist dependency zstd/lib/zstd.h won't be automatically included in the manifest: the path doesn't exist dependency zstd/lib/zstd.h won't be automatically included in the manifest: the path doesn't exist reading manifest file 'bitshuffle.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching '*.h' under directory 'lz4' warning: no files found matching '*.c' under directory 'lz4' warning: no previously-included files found matching 'setup.cfg' adding license file 'LICENSE' writing manifest file 'bitshuffle.egg-info/SOURCES.txt' Copying bitshuffle.egg-info to build/bdist.linux-x86_64/wheel/./bitshuffle-0.5.1.egg-info running install_scripts creating build/bdist.linux-x86_64/wheel/bitshuffle-0.5.1.dist-info/WHEEL creating '/build/reproducible-path/bitshuffle-0.5.1/.pybuild/cpython3_3.12_bitshuffle/.tmp-o674wcww/bitshuffle-0.5.1-cp312-cp312-linux_x86_64.whl' and adding 'build/bdist.linux-x86_64/wheel' to it adding 'bitshuffle/__init__.py' adding 'bitshuffle/ext.cpython-312-x86_64-linux-gnu.so' adding 'bitshuffle/h5.cpython-312-x86_64-linux-gnu.so' adding 'bitshuffle/plugin/libh5LZF.cpython-312-x86_64-linux-gnu.so' adding 'bitshuffle/plugin/libh5bshuf.cpython-312-x86_64-linux-gnu.so' adding 'bitshuffle-0.5.1.dist-info/LICENSE' adding 'bitshuffle-0.5.1.dist-info/METADATA' adding 'bitshuffle-0.5.1.dist-info/WHEEL' adding 'bitshuffle-0.5.1.dist-info/top_level.txt' adding 'bitshuffle-0.5.1.dist-info/RECORD' removing build/bdist.linux-x86_64/wheel Successfully built bitshuffle-0.5.1-cp312-cp312-linux_x86_64.whl I: pybuild plugin_pyproject:144: Unpacking wheel built for python3.12 with "installer" module # build the hdf5 plugins for hdf5 flavours for flavour in serial mpi; do\ builddir=/build/reproducible-path/bitshuffle-0.5.1/build-$flavour;\ mkdir -p $builddir;\ cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/bitshuffle-0.5.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -shared -std=c99 -ffast-math -pthread -O3 -fPIC \ -DBSHUF_VERSION_MAJOR=0 -DBSHUF_VERSION_MINOR=5 -DBSHUF_VERSION_POINT=1 \ -DZSTD_SUPPORT=1 \ -I/build/reproducible-path/bitshuffle-0.5.1/lzf src/lzf_h5plugin.c lzf/lzf_filter.c \ `pkg-config --cflags --libs hdf5-$flavour` \ `pkg-config --cflags --libs liblzf` \ `pkg-config --cflags --libs libzstd` \ -o $builddir/libh5LZF.so;\ cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/bitshuffle-0.5.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -shared -std=c99 -ffast-math -pthread -O3 -fPIC \ -DBSHUF_VERSION_MAJOR=0 -DBSHUF_VERSION_MINOR=5 -DBSHUF_VERSION_POINT=1 \ -DZSTD_SUPPORT=1 \ -I/build/reproducible-path/bitshuffle-0.5.1/src src/bshuf_h5plugin.c src/bshuf_h5filter.c src/bitshuffle.c src/bitshuffle_core.c src/iochain.c \ `pkg-config --cflags --libs hdf5-$flavour` \ `pkg-config --cflags --libs liblz4` \ `pkg-config --cflags --libs libzstd` \ -o $builddir/libh5bshuf.so;\ done make[1]: Leaving directory '/build/reproducible-path/bitshuffle-0.5.1' rm -f debian/bitshuffle.debhelper.log debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/bitshuffle-0.5.1' #mpirun --allow-run-as-root -n 1 dh_auto_test mpirun -n 1 dh_auto_test pybuild --test --test-pytest -i python{version} -p 3.12 I: pybuild base:311: cd /build/reproducible-path/bitshuffle-0.5.1/.pybuild/cpython3_3.12_bitshuffle/build; python3.12 -m pytest tests ============================= test session starts ============================== platform linux -- Python 3.12.7+, pytest-8.3.3, pluggy-1.5.0 rootdir: /build/reproducible-path/bitshuffle-0.5.1/.pybuild/cpython3_3.12_bitshuffle/build configfile: pyproject.toml plugins: typeguard-4.4.1 collecting ...  collected 80 items  tests/test_ext.py ...................................................... [ 67%] .................... [ 92%] tests/test_h5filter.py .... [ 97%] tests/test_h5plugin.py . [ 98%] tests/test_regression.py . [100%] ============================== 80 passed in 3.15s ============================== rm -fr -- /tmp/dh-xdg-rundir-q1cfwkNE make[1]: Leaving directory '/build/reproducible-path/bitshuffle-0.5.1' create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild rm -f -- debian/bitshuffle.substvars rm -fr -- debian/.debhelper/generated/bitshuffle/ debian/bitshuffle/ debian/tmp/ rm -f debian/bitshuffle.debhelper.log debian/rules override_dh_auto_install make[1]: Entering directory '/build/reproducible-path/bitshuffle-0.5.1' for flavour in serial mpi; do\ pdir=/build/reproducible-path/bitshuffle-0.5.1/debian/tmp/`pkg-config --variable=PluginDir hdf5-$flavour`;\ builddir=/build/reproducible-path/bitshuffle-0.5.1/build-$flavour;\ install -d $pdir;\ install -t $pdir $builddir/*;\ done dh_auto_install install -m0755 -d /build/reproducible-path/bitshuffle-0.5.1/debian/bitshuffle pybuild --install -i python{version} -p 3.12 --dest-dir /build/reproducible-path/bitshuffle-0.5.1/debian/bitshuffle I: pybuild plugin_pyproject:178: Copying package built for python3.12 to destdir make[1]: Leaving directory '/build/reproducible-path/bitshuffle-0.5.1' rm -f debian/bitshuffle.debhelper.log debian/rules override_dh_install make[1]: Entering directory '/build/reproducible-path/bitshuffle-0.5.1' dh_install dh_install -p bitshuffle /usr install -m0755 -d debian/bitshuffle/ cp --reflink=auto -a debian/tmp/usr debian/bitshuffle// make[1]: Leaving directory '/build/reproducible-path/bitshuffle-0.5.1' dh_installdocs -O--buildsystem=pybuild install -m0755 -d debian/bitshuffle/usr/share/doc/bitshuffle install -p -m0644 debian/copyright debian/bitshuffle/usr/share/doc/bitshuffle/copyright dh_installchangelogs -O--buildsystem=pybuild install -m0755 -d debian/bitshuffle/usr/share/doc/bitshuffle install -p -m0644 debian/.debhelper/generated/bitshuffle/dh_installchangelogs.dch.trimmed debian/bitshuffle/usr/share/doc/bitshuffle/changelog.Debian dh_python3 -O--buildsystem=pybuild D: dh_python3 dh_python3:180: version: 6.20241024 D: dh_python3 dh_python3:181: argv: ['/usr/bin/dh_python3', '-O--buildsystem=pybuild'] D: dh_python3 dh_python3:182: options: Namespace(guess_deps=True, skip_private=False, verbose=True, arch=None, package=None, no_package=None, remaining_packages=False, compile_all=False, vrange=None, regexpr=None, accept_upstream_versions=False, depends=None, depends_section=None, recommends=None, recommends_section=None, suggests=None, suggests_section=None, requires=None, shebang=None, ignore_shebangs=False, clean_dbg_pkg=True, no_ext_rename=False, no_shebang_rewrite=False, private_dir=None, O=['--buildsystem=pybuild']) D: dh_python3 dh_python3:183: supported Python versions: 3.12 (default=3.12) D: dh_python3 debhelper:174: source=bitshuffle, binary packages=['bitshuffle'] D: dh_python3 dh_python3:205: processing package bitshuffle... D: dh_python3 fs:50: moving files from debian/bitshuffle/usr/lib/python3.12/dist-packages to debian/bitshuffle/usr/lib/python3/dist-packages/ D: dh_python3 fs:249: removing dist-packages/.pytest_cache D: dh_python3 fs:179: Writing INSTALLER in debian/bitshuffle/usr/lib/python3/dist-packages/bitshuffle-0.5.1.dist-info D: dh_python3 fs:190: Deleting RECORD in debian/bitshuffle/usr/lib/python3/dist-packages/bitshuffle-0.5.1.dist-info D: dh_python3 fs:338: package bitshuffle details = {'requires.txt': set(), 'egg-info': set(), 'dist-info': {'debian/bitshuffle/usr/lib/python3/dist-packages/bitshuffle-0.5.1.dist-info/METADATA'}, 'nsp.txt': set(), 'shebangs': set(), 'public_vers': {Version('3')}, 'private_dirs': {}, 'compile': True, 'ext_vers': {Version('3.12')}, 'ext_no_version': set()} D: dh_python3 depends:103: generating dependencies for package bitshuffle D: dh_python3 pydist:175: trying to find dependency for h5py>=2.4.0 (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:255: dependency: constructed version D: dh_python3 pydist:175: trying to find dependency for numpy>=1.6.1 (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 depends:253: D={'python3-h5py (>= 2.4.0)', 'python3:any', 'python3-numpy', 'python3 (<< 3.13)', 'python3 (>= 3.12~)'}; R=[]; S=[]; E=[], B=[]; RT=[] dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild cd debian/bitshuffle chmod a-x usr/share/doc/bitshuffle/changelog.Debian gzip -9nf usr/share/doc/bitshuffle/changelog.Debian cd '/build/reproducible-path/bitshuffle-0.5.1' dh_fixperms -O--buildsystem=pybuild find debian/bitshuffle ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/bitshuffle/usr/share/doc -type f -a -true -a ! -regex 'debian/bitshuffle/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/bitshuffle/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/bitshuffle -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/bitshuffle/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w dh_missing -O--buildsystem=pybuild dh_dwz -a -O--buildsystem=pybuild install -m0755 -d debian/bitshuffle/usr/lib/debug/.dwz/x86_64-linux-gnu dwz -mdebian/bitshuffle/usr/lib/debug/.dwz/x86_64-linux-gnu/bitshuffle.debug -M/usr/lib/debug/.dwz/x86_64-linux-gnu/bitshuffle.debug -- debian/bitshuffle/usr/lib/python3/dist-packages/bitshuffle/ext.cpython-312-x86_64-linux-gnu.so debian/bitshuffle/usr/lib/python3/dist-packages/bitshuffle/h5.cpython-312-x86_64-linux-gnu.so debian/bitshuffle/usr/lib/python3/dist-packages/bitshuffle/plugin/libh5LZF.cpython-312-x86_64-linux-gnu.so debian/bitshuffle/usr/lib/python3/dist-packages/bitshuffle/plugin/libh5bshuf.cpython-312-x86_64-linux-gnu.so debian/bitshuffle/usr/lib/x86_64-linux-gnu/hdf5/openmpi/plugins/libh5LZF.so debian/bitshuffle/usr/lib/x86_64-linux-gnu/hdf5/openmpi/plugins/libh5bshuf.so debian/bitshuffle/usr/lib/x86_64-linux-gnu/hdf5/serial/plugins/libh5LZF.so debian/bitshuffle/usr/lib/x86_64-linux-gnu/hdf5/serial/plugins/libh5bshuf.so objcopy --compress-debug-sections debian/bitshuffle/usr/lib/debug/.dwz/x86_64-linux-gnu/bitshuffle.debug chmod 0644 -- debian/bitshuffle/usr/lib/debug/.dwz/x86_64-linux-gnu/bitshuffle.debug dh_strip -a -O--buildsystem=pybuild install -m0755 -d debian/.debhelper/bitshuffle/dbgsym-root/usr/lib/debug/.build-id/7f objcopy --only-keep-debug --compress-debug-sections debian/bitshuffle/usr/lib/python3/dist-packages/bitshuffle/h5.cpython-312-x86_64-linux-gnu.so debian/.debhelper/bitshuffle/dbgsym-root/usr/lib/debug/.build-id/7f/5a270670cf93319eab8b9cf3ccd7f4dc50b3ae.debug chmod 0644 -- debian/.debhelper/bitshuffle/dbgsym-root/usr/lib/debug/.build-id/7f/5a270670cf93319eab8b9cf3ccd7f4dc50b3ae.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/bitshuffle/usr/lib/python3/dist-packages/bitshuffle/h5.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/bitshuffle/dbgsym-root/usr/lib/debug/.build-id/7f/5a270670cf93319eab8b9cf3ccd7f4dc50b3ae.debug debian/bitshuffle/usr/lib/python3/dist-packages/bitshuffle/h5.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/bitshuffle/dbgsym-root/usr/lib/debug/.build-id/ff objcopy --only-keep-debug --compress-debug-sections debian/bitshuffle/usr/lib/python3/dist-packages/bitshuffle/ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/bitshuffle/dbgsym-root/usr/lib/debug/.build-id/ff/66345c8258b1d095168da9cad4d63f5373fe75.debug chmod 0644 -- debian/.debhelper/bitshuffle/dbgsym-root/usr/lib/debug/.build-id/ff/66345c8258b1d095168da9cad4d63f5373fe75.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/bitshuffle/usr/lib/python3/dist-packages/bitshuffle/ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/bitshuffle/dbgsym-root/usr/lib/debug/.build-id/ff/66345c8258b1d095168da9cad4d63f5373fe75.debug debian/bitshuffle/usr/lib/python3/dist-packages/bitshuffle/ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/bitshuffle/dbgsym-root/usr/lib/debug/.build-id/71 objcopy --only-keep-debug --compress-debug-sections debian/bitshuffle/usr/lib/python3/dist-packages/bitshuffle/plugin/libh5bshuf.cpython-312-x86_64-linux-gnu.so debian/.debhelper/bitshuffle/dbgsym-root/usr/lib/debug/.build-id/71/48e9251c9658f4e4792f20f432ddfcbe7fcf96.debug chmod 0644 -- debian/.debhelper/bitshuffle/dbgsym-root/usr/lib/debug/.build-id/71/48e9251c9658f4e4792f20f432ddfcbe7fcf96.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/bitshuffle/usr/lib/python3/dist-packages/bitshuffle/plugin/libh5bshuf.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/bitshuffle/dbgsym-root/usr/lib/debug/.build-id/71/48e9251c9658f4e4792f20f432ddfcbe7fcf96.debug debian/bitshuffle/usr/lib/python3/dist-packages/bitshuffle/plugin/libh5bshuf.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/bitshuffle/dbgsym-root/usr/lib/debug/.build-id/7b objcopy --only-keep-debug --compress-debug-sections debian/bitshuffle/usr/lib/python3/dist-packages/bitshuffle/plugin/libh5LZF.cpython-312-x86_64-linux-gnu.so debian/.debhelper/bitshuffle/dbgsym-root/usr/lib/debug/.build-id/7b/96079de0e5eda66af5d913a1cb21b84aecfd2c.debug chmod 0644 -- debian/.debhelper/bitshuffle/dbgsym-root/usr/lib/debug/.build-id/7b/96079de0e5eda66af5d913a1cb21b84aecfd2c.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/bitshuffle/usr/lib/python3/dist-packages/bitshuffle/plugin/libh5LZF.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/bitshuffle/dbgsym-root/usr/lib/debug/.build-id/7b/96079de0e5eda66af5d913a1cb21b84aecfd2c.debug debian/bitshuffle/usr/lib/python3/dist-packages/bitshuffle/plugin/libh5LZF.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/bitshuffle/dbgsym-root/usr/lib/debug/.build-id/3d objcopy --only-keep-debug --compress-debug-sections debian/bitshuffle/usr/lib/x86_64-linux-gnu/hdf5/serial/plugins/libh5LZF.so debian/.debhelper/bitshuffle/dbgsym-root/usr/lib/debug/.build-id/3d/2cd0abd8eb2f63601a4615dd2cb2c5ed7c85d0.debug chmod 0644 -- debian/.debhelper/bitshuffle/dbgsym-root/usr/lib/debug/.build-id/3d/2cd0abd8eb2f63601a4615dd2cb2c5ed7c85d0.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/bitshuffle/usr/lib/x86_64-linux-gnu/hdf5/serial/plugins/libh5LZF.so objcopy --add-gnu-debuglink debian/.debhelper/bitshuffle/dbgsym-root/usr/lib/debug/.build-id/3d/2cd0abd8eb2f63601a4615dd2cb2c5ed7c85d0.debug debian/bitshuffle/usr/lib/x86_64-linux-gnu/hdf5/serial/plugins/libh5LZF.so install -m0755 -d debian/.debhelper/bitshuffle/dbgsym-root/usr/lib/debug/.build-id/80 objcopy --only-keep-debug --compress-debug-sections debian/bitshuffle/usr/lib/x86_64-linux-gnu/hdf5/serial/plugins/libh5bshuf.so debian/.debhelper/bitshuffle/dbgsym-root/usr/lib/debug/.build-id/80/5af8de052629e15187bcb51e69d89f16eb8a5b.debug chmod 0644 -- debian/.debhelper/bitshuffle/dbgsym-root/usr/lib/debug/.build-id/80/5af8de052629e15187bcb51e69d89f16eb8a5b.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/bitshuffle/usr/lib/x86_64-linux-gnu/hdf5/serial/plugins/libh5bshuf.so objcopy --add-gnu-debuglink debian/.debhelper/bitshuffle/dbgsym-root/usr/lib/debug/.build-id/80/5af8de052629e15187bcb51e69d89f16eb8a5b.debug debian/bitshuffle/usr/lib/x86_64-linux-gnu/hdf5/serial/plugins/libh5bshuf.so install -m0755 -d debian/.debhelper/bitshuffle/dbgsym-root/usr/lib/debug/.build-id/60 objcopy --only-keep-debug --compress-debug-sections debian/bitshuffle/usr/lib/x86_64-linux-gnu/hdf5/openmpi/plugins/libh5LZF.so debian/.debhelper/bitshuffle/dbgsym-root/usr/lib/debug/.build-id/60/b7f1860112b0e28eba201c627f7f3d03a0345b.debug chmod 0644 -- debian/.debhelper/bitshuffle/dbgsym-root/usr/lib/debug/.build-id/60/b7f1860112b0e28eba201c627f7f3d03a0345b.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/bitshuffle/usr/lib/x86_64-linux-gnu/hdf5/openmpi/plugins/libh5LZF.so objcopy --add-gnu-debuglink debian/.debhelper/bitshuffle/dbgsym-root/usr/lib/debug/.build-id/60/b7f1860112b0e28eba201c627f7f3d03a0345b.debug debian/bitshuffle/usr/lib/x86_64-linux-gnu/hdf5/openmpi/plugins/libh5LZF.so install -m0755 -d debian/.debhelper/bitshuffle/dbgsym-root/usr/lib/debug/.build-id/3b objcopy --only-keep-debug --compress-debug-sections debian/bitshuffle/usr/lib/x86_64-linux-gnu/hdf5/openmpi/plugins/libh5bshuf.so debian/.debhelper/bitshuffle/dbgsym-root/usr/lib/debug/.build-id/3b/09ca5fe001d06f7ba4578166f4052d9b0bb91b.debug chmod 0644 -- debian/.debhelper/bitshuffle/dbgsym-root/usr/lib/debug/.build-id/3b/09ca5fe001d06f7ba4578166f4052d9b0bb91b.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/bitshuffle/usr/lib/x86_64-linux-gnu/hdf5/openmpi/plugins/libh5bshuf.so objcopy --add-gnu-debuglink debian/.debhelper/bitshuffle/dbgsym-root/usr/lib/debug/.build-id/3b/09ca5fe001d06f7ba4578166f4052d9b0bb91b.debug debian/bitshuffle/usr/lib/x86_64-linux-gnu/hdf5/openmpi/plugins/libh5bshuf.so install -m0755 -d debian/.debhelper/bitshuffle/dbgsym-root/usr/lib/debug/.dwz cp --reflink=auto -a debian/bitshuffle/usr/lib/debug/.dwz/x86_64-linux-gnu debian/.debhelper/bitshuffle/dbgsym-root/usr/lib/debug/.dwz rm -fr debian/bitshuffle/usr/lib/debug/.dwz rmdir -p --ignore-fail-on-non-empty debian/bitshuffle/usr/lib/debug install -m0755 -d debian/.debhelper/bitshuffle/dbgsym-root/usr/share/doc ln -s bitshuffle debian/.debhelper/bitshuffle/dbgsym-root/usr/share/doc/bitshuffle-dbgsym install -m0755 -d debian/.debhelper/bitshuffle dh_makeshlibs -a -O--buildsystem=pybuild rm -f debian/bitshuffle/DEBIAN/shlibs dh_shlibdeps -a -O--buildsystem=pybuild install -m0755 -d debian/bitshuffle/DEBIAN dpkg-shlibdeps -Tdebian/bitshuffle.substvars debian/bitshuffle/usr/lib/python3/dist-packages/bitshuffle/h5.cpython-312-x86_64-linux-gnu.so debian/bitshuffle/usr/lib/python3/dist-packages/bitshuffle/ext.cpython-312-x86_64-linux-gnu.so debian/bitshuffle/usr/lib/python3/dist-packages/bitshuffle/plugin/libh5bshuf.cpython-312-x86_64-linux-gnu.so debian/bitshuffle/usr/lib/python3/dist-packages/bitshuffle/plugin/libh5LZF.cpython-312-x86_64-linux-gnu.so debian/bitshuffle/usr/lib/x86_64-linux-gnu/hdf5/serial/plugins/libh5LZF.so debian/bitshuffle/usr/lib/x86_64-linux-gnu/hdf5/serial/plugins/libh5bshuf.so debian/bitshuffle/usr/lib/x86_64-linux-gnu/hdf5/openmpi/plugins/libh5LZF.so debian/bitshuffle/usr/lib/x86_64-linux-gnu/hdf5/openmpi/plugins/libh5bshuf.so dh_installdeb -O--buildsystem=pybuild install -m0755 -d debian/bitshuffle/DEBIAN printf '#!/bin/sh\nset -e\n' > debian/bitshuffle/DEBIAN/postinst cat debian/bitshuffle.postinst.debhelper >> debian/bitshuffle/DEBIAN/postinst chmod 0755 -- debian/bitshuffle/DEBIAN/postinst printf '#!/bin/sh\nset -e\n' > debian/bitshuffle/DEBIAN/prerm cat debian/bitshuffle.prerm.debhelper >> debian/bitshuffle/DEBIAN/prerm chmod 0755 -- debian/bitshuffle/DEBIAN/prerm dh_numpy3 -O--buildsystem=pybuild mv debian/bitshuffle.substvars.new debian/bitshuffle.substvars dh_gencontrol -O--buildsystem=pybuild install -m0755 -d debian/bitshuffle/DEBIAN echo misc:Depends= >> debian/bitshuffle.substvars echo misc:Pre-Depends= >> debian/bitshuffle.substvars install -m0755 -d debian/.debhelper/bitshuffle/dbgsym-root/DEBIAN dpkg-gencontrol -pbitshuffle -ldebian/changelog -Tdebian/bitshuffle.substvars -cdebian/control -Pdebian/.debhelper/bitshuffle/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -UProtected -UBuilt-Using -UStatic-Built-Using -DPackage=bitshuffle-dbgsym "-DDepends=bitshuffle (= \${binary:Version})" "-DDescription=debug symbols for bitshuffle" "-DBuild-Ids=3b09ca5fe001d06f7ba4578166f4052d9b0bb91b 3d2cd0abd8eb2f63601a4615dd2cb2c5ed7c85d0 60b7f1860112b0e28eba201c627f7f3d03a0345b 7148e9251c9658f4e4792f20f432ddfcbe7fcf96 7b96079de0e5eda66af5d913a1cb21b84aecfd2c 7f5a270670cf93319eab8b9cf3ccd7f4dc50b3ae 805af8de052629e15187bcb51e69d89f16eb8a5b ff66345c8258b1d095168da9cad4d63f5373fe75" -DSection=debug -UMulti-Arch -UReplaces -UBreaks chmod 0644 -- debian/.debhelper/bitshuffle/dbgsym-root/DEBIAN/control dpkg-gencontrol -pbitshuffle -ldebian/changelog -Tdebian/bitshuffle.substvars -cdebian/control -Pdebian/bitshuffle chmod 0644 -- debian/bitshuffle/DEBIAN/control dh_md5sums -O--buildsystem=pybuild install -m0755 -d debian/bitshuffle/DEBIAN cd debian/bitshuffle >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/bitshuffle/DEBIAN/md5sums install -m0755 -d debian/.debhelper/bitshuffle/dbgsym-root/DEBIAN cd debian/.debhelper/bitshuffle/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/bitshuffle/dbgsym-root/DEBIAN/md5sums dh_builddeb -O--buildsystem=pybuild dpkg-deb --root-owner-group --build debian/bitshuffle .. dpkg-deb --root-owner-group --build debian/.debhelper/bitshuffle/dbgsym-root .. dpkg-deb: building package 'bitshuffle' in '../bitshuffle_0.5.1-2_amd64.deb'. dpkg-deb: building package 'bitshuffle-dbgsym' in '../bitshuffle-dbgsym_0.5.1-2_amd64.deb'. dpkg-genbuildinfo --build=binary -O../bitshuffle_0.5.1-2_amd64.buildinfo dpkg-genchanges --build=binary -O../bitshuffle_0.5.1-2_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3175437 and its subdirectories I: Current time: Mon Dec 8 15:54:40 -12 2025 I: pbuilder-time-stamp: 1765252480 Tue Nov 5 21:31:41 UTC 2024 I: 1st build successful. Starting 2nd build on remote node ionos1-amd64.debian.net. Tue Nov 5 21:31:41 UTC 2024 I: Preparing to do remote build '2' on ionos1-amd64.debian.net. Tue Nov 5 21:35:39 UTC 2024 I: Deleting $TMPDIR on ionos1-amd64.debian.net. Tue Nov 5 21:35:39 UTC 2024 I: bitshuffle_0.5.1-2_amd64.changes: Format: 1.8 Date: Sun, 22 Sep 2024 10:33:11 +0200 Source: bitshuffle Binary: bitshuffle bitshuffle-dbgsym Architecture: amd64 Version: 0.5.1-2 Distribution: unstable Urgency: medium Maintainer: Debian PaN Maintainers Changed-By: Picca Frédéric-Emmanuel Description: bitshuffle - filter for improving compression of typed binary data Closes: 959964 1081719 Changes: bitshuffle (0.5.1-2) unstable; urgency=medium . * Team Upload * d/control: - Maintainer is now Debian PaN Maintainers - Moved Thorsten Alteholz to Uploaders - Added more uploaders: - Debian Science Maintainers - Picca Frédéric-Emmanuel - B-D: do not hardcode the mpi version and instead use the default-mpi-[X] packages. * d/rules: - the zstd pkgconf file is names libzstd and not zstd - do not use allow-run-as-root which is not available with mpich. * Bug fix: "switch to hdf5/mpich on 32 bit architectures or remove 32 bit binary packages", thanks to Sebastian Ramacher (Closes: #1081719). * Bug fix: "What about moving bitshuffle into debian-science", thanks to Picca Frédéric-Emmanuel (Closes: #959964). Checksums-Sha1: 681f0a9d385e627e620790e0da1e1e26c334540c 797376 bitshuffle-dbgsym_0.5.1-2_amd64.deb 124800e773e259696b7b9b373a94557705968a61 11514 bitshuffle_0.5.1-2_amd64.buildinfo 885c79ed0115c30eac8ffefb775626d89e8f7183 133488 bitshuffle_0.5.1-2_amd64.deb Checksums-Sha256: 426462ca74366ed210247dfd86580f60ce0a76b8f898d187d551d56b3f317da9 797376 bitshuffle-dbgsym_0.5.1-2_amd64.deb 983f6cebccb7f143ab46fb309a158b03c955dc481e720427438b81a53ccfdffd 11514 bitshuffle_0.5.1-2_amd64.buildinfo eb3ae4ffe5528877756cff57fd2cab085376b33ff8d4feae4353e222e5eef9cc 133488 bitshuffle_0.5.1-2_amd64.deb Files: d917edc0946f79be0293291ef5578160 797376 debug optional bitshuffle-dbgsym_0.5.1-2_amd64.deb 246f65c97fed9c5ebbd8c5f921c37f77 11514 devel optional bitshuffle_0.5.1-2_amd64.buildinfo 607094979ee93108556eefe82ea674ef 133488 libs optional bitshuffle_0.5.1-2_amd64.deb Tue Nov 5 21:35:46 UTC 2024 I: diffoscope 282 will be used to compare the two builds: Running as unit: rb-diffoscope-amd64_18-22804.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.4qsuuh37/bitshuffle_0.5.1-2.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.4qsuuh37/bitshuffle_0.5.1-2.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.4qsuuh37/bitshuffle_0.5.1-2.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.4qsuuh37/b1/bitshuffle_0.5.1-2_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.4qsuuh37/b2/bitshuffle_0.5.1-2_amd64.changes ## close_archive (total time: 0.001s) 0.000s 32 calls diffoscope.comparators.xz.XzContainer 0.000s 20 calls diffoscope.comparators.deb.DebTarContainer 0.000s 8 calls diffoscope.comparators.deb.DebContainer 0.000s 12 calls diffoscope.comparators.tar.TarContainer ## command (total time: 87.480s) 37.196s 8180 calls readelf 34.747s 921 calls diff 13.194s 1760 calls objdump 1.418s 16 calls objcopy 0.612s 32 calls xz 0.310s 187 calls strings 0.003s 34 calls cmp (internal) ## compare_files (cumulative) (total time: 319.288s) 58.639s 1 call abc.DotChangesFile 58.617s 2 calls abc.DebFile 58.544s 4 calls abc.XzFile 58.321s 2 calls abc.DebDataTarFile 58.023s 17 calls abc.ElfFile 23.235s 80 calls diffoscope.comparators.elf.ElfCodeSection 3.322s 253 calls diffoscope.comparators.elf.ElfSection 0.336s 19 calls diffoscope.comparators.elf.ElfStringSection 0.116s 8 calls diffoscope.comparators.elf.MonkeyPatchedElfSection 0.101s 2 calls abc.TarFile 0.020s 1 call abc.TextFile 0.013s 2 calls abc.Md5sumsFile ## container_extract (total time: 0.787s) 0.613s 32 calls diffoscope.comparators.xz.XzContainer 0.137s 64 calls diffoscope.comparators.deb.DebTarContainer 0.022s 36 calls diffoscope.comparators.deb.DebContainer 0.015s 20 calls diffoscope.comparators.tar.TarContainer ## diff (total time: 0.738s) 0.738s 93 calls linediff ## has_same_content_as (total time: 0.011s) 0.003s 17 calls abc.ElfFile 0.002s 253 calls diffoscope.comparators.elf.ElfSection 0.001s 6 calls abc.TextFile 0.001s 80 calls diffoscope.comparators.elf.ElfCodeSection 0.001s 4 calls abc.Md5sumsFile 0.000s 2 calls abc.DebDataTarFile 0.000s 4 calls abc.XzFile 0.000s 2 calls abc.TarFile 0.000s 2 calls abc.DebFile 0.000s 19 calls diffoscope.comparators.elf.ElfStringSection 0.000s 1 call abc.DotChangesFile 0.000s 1 call diffoscope.comparators.utils.libarchive.LibarchiveSymlink 0.000s 8 calls diffoscope.comparators.elf.MonkeyPatchedElfSection ## main (total time: 61.107s) 61.105s 2 calls outputs 0.002s 1 call cleanup ## open_archive (total time: 0.001s) 0.001s 32 calls diffoscope.comparators.xz.XzContainer 0.000s 20 calls diffoscope.comparators.deb.DebTarContainer 0.000s 12 calls diffoscope.comparators.tar.TarContainer 0.000s 8 calls diffoscope.comparators.deb.DebContainer ## output (total time: 1.924s) 1.918s 1 call html 0.003s 1 call text 0.002s 1 call json ## recognizes (total time: 0.999s) 0.566s 920 calls diffoscope.comparators.utils.archive.ArchiveMember 0.384s 3908 calls diffoscope.comparators.utils.libarchive.LibarchiveMember 0.035s 12 calls diffoscope.comparators.binary.FilesystemFile 0.014s 216 calls diffoscope.comparators.debian.DebControlMember ## specialize (total time: 0.200s) 0.200s 399 calls specialize Finished with result: success Main processes terminated with: code=exited/status=1 Service runtime: 1min 6.550s CPU time consumed: 1min 23.337s Tue Nov 5 21:36:58 UTC 2024 W: Diffoscope claims the build is reproducible, but there is a diffoscope file. Please investigate. Tue Nov 5 21:36:58 UTC 2024 E: bitshuffle failed to build reproducibly in unstable on amd64. Tue Nov 5 21:37:01 UTC 2024 I: Submitting .buildinfo files to external archives: Tue Nov 5 21:37:01 UTC 2024 I: Submitting 16K b1/bitshuffle_0.5.1-2_amd64.buildinfo.asc Tue Nov 5 21:37:01 UTC 2024 I: Submitting 16K b2/bitshuffle_0.5.1-2_amd64.buildinfo.asc Tue Nov 5 21:37:02 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Tue Nov 5 21:37:02 UTC 2024 I: Done submitting .buildinfo files. Tue Nov 5 21:37:02 UTC 2024 I: Removing signed bitshuffle_0.5.1-2_amd64.buildinfo.asc files: removed './b1/bitshuffle_0.5.1-2_amd64.buildinfo.asc' removed './b2/bitshuffle_0.5.1-2_amd64.buildinfo.asc'