Sun Oct 27 14:45:37 UTC 2024 I: starting to build weka/trixie/i386 on jenkins on '2024-10-27 14:45' Sun Oct 27 14:45:37 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_5/36727/console.log Sun Oct 27 14:45:37 UTC 2024 I: Downloading source for trixie/weka=3.6.14-4 --2024-10-27 14:45:37-- http://deb.debian.org/debian/pool/main/w/weka/weka_3.6.14-4.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2106 (2.1K) [text/prs.lines.tag] Saving to: ‘weka_3.6.14-4.dsc’ 0K .. 100% 179M=0s 2024-10-27 14:45:37 (179 MB/s) - ‘weka_3.6.14-4.dsc’ saved [2106/2106] Sun Oct 27 14:45:37 UTC 2024 I: weka_3.6.14-4.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: weka Binary: weka, weka-doc Architecture: all Version: 3.6.14-4 Maintainer: Debian Java Maintainers Uploaders: Torsten Werner , tony mancill Homepage: https://www.cs.waikato.ac.nz/~ml/weka/ Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/java-team/weka Vcs-Git: https://salsa.debian.org/java-team/weka.git Build-Depends: ant, cup (>= 0.11a+20060608), debhelper-compat (= 13), default-jdk, ghostscript, jflex, texlive-latex-base, texlive-latex-extra Package-List: weka deb science optional arch=all weka-doc deb doc optional arch=all Checksums-Sha1: c9ea3a19af3833ec738dc73b411588e8bb7bbdfe 14523273 weka_3.6.14.orig.tar.gz f94d7c3d342ef149a72150a08a9b6fc1d3cd885f 11376 weka_3.6.14-4.debian.tar.xz Checksums-Sha256: bef592188ef4da3488c6043e782c6c8cea42877364d8a2be68d4d61b9a602368 14523273 weka_3.6.14.orig.tar.gz ac89291457bd4db93d78b83b81133f616574e01936755e4922f00be1d6a0ad36 11376 weka_3.6.14-4.debian.tar.xz Files: 84f07483989d7c9ee46b433aa9571652 14523273 weka_3.6.14.orig.tar.gz 7f56f954fff0be45add12b7b2675f513 11376 weka_3.6.14-4.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEE5Qr9Va3SequXFjqLIdIFiZdLPpYFAmVtf74UHHRtYW5jaWxs QGRlYmlhbi5vcmcACgkQIdIFiZdLPpb3jBAAo7H4Ih2ArI4WTFp+/n6nffalbpIO xMkkjexVACyVVyrT5deQBJ8oIIqLCOVkOmthYOyA6i6G4kQfAU8e88Rk0pqsjNOA uq9m/+pp+rN5f8hw+/0vJwCC98JKwiGEC6Ozl4zDzZan59NBRV++L0nbUZ/xzUlw tJpsv4Qx+1vo+Zefm9SryPDlEzSiufMAx81J8f1c9u3+uQVVVP/4IM+XtuHbJlcr 3xK4sDyejOz9BOarcMTnteZFOJkpKAYz9cKrZoxOHHyU+xriceXwejW3BmJygYgx sPIKjg1TSgeUypmg5fVBrLOGp82osqtVz/YKsf8F1FsFVKbkekk6e4AMAnTXD/7/ nFrmq8xQqv/6PcNzKckhpgtsZDB55jrDAMo/7sOymPjT9NwsEp7EtgIUJwIle/sv 4TbC36KlYosazCoWItOEo0usdM6ARMZOGVVSk7GejFmVRHeyLYUEF6/WuSubK960 PQYfKue7JXu0WfGiCSQni6ckPQqkHYQkeoe9pKmzbW31/zfiTFECo+9gUh2EAYJP CeebSASTCa9jlRO0XfYnH7V8WJA8iRiC25rIscH9h9CfBT2XUyDCDZGtbz89HWJc HseSOjfPSdhacRsjtCb4w9PklERau+h5jFs6rQCJnkG8cufKp5kmuy2MnmVxiO5Z 3RT8T4GBHfg/wP8= =aZqp -----END PGP SIGNATURE----- Sun Oct 27 14:45:37 UTC 2024 I: Checking whether the package is not for us Sun Oct 27 14:45:37 UTC 2024 I: Starting 1st build on remote node ionos12-i386.debian.net. Sun Oct 27 14:45:37 UTC 2024 I: Preparing to do remote build '1' on ionos12-i386.debian.net. Sun Oct 27 14:53:27 UTC 2024 I: Deleting $TMPDIR on ionos12-i386.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Sun Oct 27 02:45:41 -12 2024 I: pbuilder-time-stamp: 1730040341 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [weka_3.6.14-4.dsc] I: copying [./weka_3.6.14.orig.tar.gz] I: copying [./weka_3.6.14-4.debian.tar.xz] I: Extracting source gpgv: Signature made Mon Dec 4 07:29:02 2023 gpgv: using RSA key E50AFD55ADD27AAB97163A8B21D20589974B3E96 gpgv: issuer "tmancill@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./weka_3.6.14-4.dsc: no acceptable signature found dpkg-source: info: extracting weka in weka-3.6.14 dpkg-source: info: unpacking weka_3.6.14.orig.tar.gz dpkg-source: info: unpacking weka_3.6.14-4.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying jar.patch dpkg-source: info: applying disable-rmic-static-stub.patch dpkg-source: info: applying reproducible.patch dpkg-source: info: applying set_compiler_release.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/62125/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=11 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='182aa4585f63409ab82ff2ac096b1272' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='62125' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.g5YnNZVg/pbuilderrc_4teX --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.g5YnNZVg/b1 --logfile b1/build.log weka_3.6.14-4.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://46.16.76.132:3128' I: uname -a Linux ionos12-i386 6.1.0-26-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.112-1 (2024-09-30) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/62125/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: ant, cup (>= 0.11a+20060608), debhelper-compat (= 13), default-jdk, ghostscript, jflex, texlive-latex-base, texlive-latex-extra dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19934 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on ant; however: Package ant is not installed. pbuilder-satisfydepends-dummy depends on cup (>= 0.11a+20060608); however: Package cup is not installed. pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on default-jdk; however: Package default-jdk is not installed. pbuilder-satisfydepends-dummy depends on ghostscript; however: Package ghostscript is not installed. pbuilder-satisfydepends-dummy depends on jflex; however: Package jflex is not installed. pbuilder-satisfydepends-dummy depends on texlive-latex-base; however: Package texlive-latex-base is not installed. pbuilder-satisfydepends-dummy depends on texlive-latex-extra; however: Package texlive-latex-extra is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: adwaita-icon-theme{a} ant{a} at-spi2-common{a} autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} ca-certificates-java{a} cup{a} dbus{a} dbus-bin{a} dbus-daemon{a} dbus-session-bus-common{a} dbus-system-bus-common{a} dbus-user-session{a} dconf-gsettings-backend{a} dconf-service{a} debhelper{a} default-jdk{a} default-jdk-headless{a} default-jre{a} default-jre-headless{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-lmodern{a} fonts-urw-base35{a} gettext{a} gettext-base{a} ghostscript{a} groff-base{a} gtk-update-icon-cache{a} hicolor-icon-theme{a} intltool-debian{a} java-common{a} jflex{a} libapache-pom-java{a} libapparmor1{a} libarchive-zip-perl{a} libasound2-data{a} libasound2t64{a} libatk-bridge2.0-0t64{a} libatk1.0-0t64{a} libatspi2.0-0t64{a} libavahi-client3{a} libavahi-common-data{a} libavahi-common3{a} libbrotli1{a} libcairo-gobject2{a} libcairo2{a} libcloudproviders0{a} libcolord2{a} libcom-err2{a} libcommons-logging-java{a} libcommons-parent-java{a} libcups2t64{a} libdatrie1{a} libdbus-1-3{a} libdconf1{a} libdebhelper-perl{a} libdeflate0{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm-intel1{a} libdrm-radeon1{a} libdrm2{a} libedit2{a} libelf1t64{a} libepoxy0{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libfontbox-java{a} libfontconfig1{a} libfontenc1{a} libfreetype6{a} libfribidi0{a} libgbm1{a} libgdk-pixbuf-2.0-0{a} libgdk-pixbuf2.0-common{a} libgif7{a} libgl1{a} libgl1-mesa-dri{a} libglapi-mesa{a} libglib2.0-0t64{a} libglvnd0{a} libglx-mesa0{a} libglx0{a} libgraphite2-3{a} libgs-common{a} libgs10{a} libgs10-common{a} libgssapi-krb5-2{a} libgtk-3-0t64{a} libgtk-3-common{a} libharfbuzz0b{a} libice6{a} libicu72{a} libidn12{a} libijs-0.35{a} libjbig0{a} libjbig2dec0{a} libjpeg62-turbo{a} libk5crypto3{a} libkeyutils1{a} libkpathsea6{a} libkrb5-3{a} libkrb5support0{a} liblcms2-2{a} liblerc4{a} libllvm19{a} libmagic-mgc{a} libmagic1t64{a} libmpfi0{a} libnsl2{a} libnspr4{a} libnss3{a} libopenjp2-7{a} libpam-systemd{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpaper-utils{a} libpaper1{a} libpciaccess0{a} libpcsclite1{a} libpdfbox-java{a} libpipeline1{a} libpixman-1-0{a} libpng16-16t64{a} libpotrace0{a} libproc2-0{a} libptexenc1{a} libpython3-stdlib{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libreadline8t64{a} libsensors-config{a} libsensors5{a} libsharpyuv0{a} libsm6{a} libsynctex2{a} libsystemd-shared{a} libteckit0{a} libtexlua53-5{a} libthai-data{a} libthai0{a} libtiff6{a} libtirpc-common{a} libtirpc3t64{a} libtool{a} libuchardet0{a} libvulkan1{a} libwayland-client0{a} libwayland-cursor0{a} libwayland-egl1{a} libwayland-server0{a} libwebp7{a} libx11-6{a} libx11-data{a} libx11-xcb1{a} libxau6{a} libxaw7{a} libxcb-dri2-0{a} libxcb-dri3-0{a} libxcb-glx0{a} libxcb-present0{a} libxcb-randr0{a} libxcb-render0{a} libxcb-shm0{a} libxcb-sync1{a} libxcb-xfixes0{a} libxcb1{a} libxcomposite1{a} libxcursor1{a} libxdamage1{a} libxdmcp6{a} libxext6{a} libxfixes3{a} libxi6{a} libxinerama1{a} libxkbcommon0{a} libxml2{a} libxmu6{a} libxpm4{a} libxrandr2{a} libxrender1{a} libxshmfence1{a} libxt6t64{a} libxtst6{a} libxxf86vm1{a} libz3-4{a} libzzip-0-13t64{a} m4{a} man-db{a} media-types{a} mesa-libgallium{a} netbase{a} openjdk-21-jdk{a} openjdk-21-jdk-headless{a} openjdk-21-jre{a} openjdk-21-jre-headless{a} openssl{a} po-debconf{a} poppler-data{a} preview-latex-style{a} procps{a} python3{a} python3-minimal{a} python3.12{a} python3.12-minimal{a} readline-common{a} sensible-utils{a} shared-mime-info{a} systemd{a} systemd-sysv{a} t1utils{a} tex-common{a} texlive-base{a} texlive-binaries{a} texlive-latex-base{a} texlive-latex-extra{a} texlive-latex-recommended{a} texlive-pictures{a} tzdata{a} ucf{a} x11-common{a} xdg-utils{a} xfonts-encodings{a} xfonts-utils{a} xkb-data{a} The following packages are RECOMMENDED but will NOT be installed: alsa-topology-conf alsa-ucm-conf ant-optional at-spi2-core chrony curl dvisvgm fonts-dejavu-extra fonts-droid-fallback krb5-locales libarchive-cpio-perl libatk-wrapper-java-jni libfile-mimeinfo-perl libgdk-pixbuf2.0-bin libglib2.0-data libgtk-3-bin libkmod2 libltdl-dev libmail-sendmail-perl libnet-dbus-perl libnss-systemd librsvg2-common libspreadsheet-parseexcel-perl libx11-protocol-perl libxt-dev linux-sysctl-defaults lmodern lynx mesa-vulkan-drivers ntpsec openntpd psmisc ruby systemd-cryptsetup systemd-timesyncd texlive-fonts-recommended texlive-plain-generic tk wget x11-utils x11-xserver-utils xdg-user-dirs 0 packages upgraded, 237 newly installed, 0 to remove and 0 not upgraded. Need to get 357 MB of archives. After unpacking 1145 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main i386 libapparmor1 i386 3.1.7-1+b1 [43.0 kB] Get: 2 http://deb.debian.org/debian trixie/main i386 libsystemd-shared i386 256.7-2 [2130 kB] Get: 3 http://deb.debian.org/debian trixie/main i386 systemd i386 256.7-2 [3499 kB] Get: 4 http://deb.debian.org/debian trixie/main i386 systemd-sysv i386 256.7-2 [58.5 kB] Get: 5 http://deb.debian.org/debian trixie/main i386 libdbus-1-3 i386 1.14.10-4+b1 [217 kB] Get: 6 http://deb.debian.org/debian trixie/main i386 dbus-bin i386 1.14.10-4+b1 [107 kB] Get: 7 http://deb.debian.org/debian trixie/main i386 dbus-session-bus-common all 1.14.10-4 [79.0 kB] Get: 8 http://deb.debian.org/debian trixie/main i386 libexpat1 i386 2.6.3-1 [107 kB] Get: 9 http://deb.debian.org/debian trixie/main i386 dbus-daemon i386 1.14.10-4+b1 [195 kB] Get: 10 http://deb.debian.org/debian trixie/main i386 dbus-system-bus-common all 1.14.10-4 [80.1 kB] Get: 11 http://deb.debian.org/debian trixie/main i386 dbus i386 1.14.10-4+b1 [101 kB] Get: 12 http://deb.debian.org/debian trixie/main i386 poppler-data all 0.4.12-1 [1601 kB] Get: 13 http://deb.debian.org/debian trixie/main i386 libpython3.12-minimal i386 3.12.6-1 [813 kB] Get: 14 http://deb.debian.org/debian trixie/main i386 python3.12-minimal i386 3.12.6-1 [2242 kB] Get: 15 http://deb.debian.org/debian trixie/main i386 python3-minimal i386 3.12.6-1 [26.7 kB] Get: 16 http://deb.debian.org/debian trixie/main i386 media-types all 10.1.0 [26.9 kB] Get: 17 http://deb.debian.org/debian trixie/main i386 netbase all 6.4 [12.8 kB] Get: 18 http://deb.debian.org/debian trixie/main i386 tzdata all 2024a-4 [255 kB] Get: 19 http://deb.debian.org/debian trixie/main i386 libkrb5support0 i386 1.21.3-3 [34.9 kB] Get: 20 http://deb.debian.org/debian trixie/main i386 libcom-err2 i386 1.47.1-1 [23.1 kB] Get: 21 http://deb.debian.org/debian trixie/main i386 libk5crypto3 i386 1.21.3-3 [83.6 kB] Get: 22 http://deb.debian.org/debian trixie/main i386 libkeyutils1 i386 1.6.3-4 [9600 B] Get: 23 http://deb.debian.org/debian trixie/main i386 libkrb5-3 i386 1.21.3-3 [350 kB] Get: 24 http://deb.debian.org/debian trixie/main i386 libgssapi-krb5-2 i386 1.21.3-3 [146 kB] Get: 25 http://deb.debian.org/debian trixie/main i386 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get: 26 http://deb.debian.org/debian trixie/main i386 libtirpc3t64 i386 1.3.4+ds-1.3 [90.2 kB] Get: 27 http://deb.debian.org/debian trixie/main i386 libnsl2 i386 1.3.0-3+b2 [42.4 kB] Get: 28 http://deb.debian.org/debian trixie/main i386 readline-common all 8.2-5 [69.3 kB] Get: 29 http://deb.debian.org/debian trixie/main i386 libreadline8t64 i386 8.2-5 [173 kB] Get: 30 http://deb.debian.org/debian trixie/main i386 libpython3.12-stdlib i386 3.12.6-1 [1961 kB] Get: 31 http://deb.debian.org/debian trixie/main i386 python3.12 i386 3.12.6-1 [669 kB] Get: 32 http://deb.debian.org/debian trixie/main i386 libpython3-stdlib i386 3.12.6-1 [9692 B] Get: 33 http://deb.debian.org/debian trixie/main i386 python3 i386 3.12.6-1 [27.8 kB] Get: 34 http://deb.debian.org/debian trixie/main i386 libproc2-0 i386 2:4.0.4-6 [65.7 kB] Get: 35 http://deb.debian.org/debian trixie/main i386 procps i386 2:4.0.4-6 [876 kB] Get: 36 http://deb.debian.org/debian trixie/main i386 sensible-utils all 0.0.24 [24.8 kB] Get: 37 http://deb.debian.org/debian trixie/main i386 openssl i386 3.3.2-1 [1386 kB] Get: 38 http://deb.debian.org/debian trixie/main i386 ca-certificates all 20240203 [158 kB] Get: 39 http://deb.debian.org/debian trixie/main i386 libmagic-mgc i386 1:5.45-3 [314 kB] Get: 40 http://deb.debian.org/debian trixie/main i386 libmagic1t64 i386 1:5.45-3 [114 kB] Get: 41 http://deb.debian.org/debian trixie/main i386 file i386 1:5.45-3 [42.9 kB] Get: 42 http://deb.debian.org/debian trixie/main i386 gettext-base i386 0.22.5-2 [201 kB] Get: 43 http://deb.debian.org/debian trixie/main i386 libuchardet0 i386 0.0.8-1+b1 [69.1 kB] Get: 44 http://deb.debian.org/debian trixie/main i386 groff-base i386 1.23.0-5 [1196 kB] Get: 45 http://deb.debian.org/debian trixie/main i386 libpam-systemd i386 256.7-2 [290 kB] Get: 46 http://deb.debian.org/debian trixie/main i386 bsdextrautils i386 2.40.2-9 [102 kB] Get: 47 http://deb.debian.org/debian trixie/main i386 libpipeline1 i386 1.5.8-1 [41.2 kB] Get: 48 http://deb.debian.org/debian trixie/main i386 man-db i386 2.13.0-1 [1428 kB] Get: 49 http://deb.debian.org/debian trixie/main i386 ucf all 3.0043+nmu1 [55.2 kB] Get: 50 http://deb.debian.org/debian trixie/main i386 libgdk-pixbuf2.0-common all 2.42.12+dfsg-1 [311 kB] Get: 51 http://deb.debian.org/debian trixie/main i386 libglib2.0-0t64 i386 2.82.1-1 [1570 kB] Get: 52 http://deb.debian.org/debian trixie/main i386 libicu72 i386 72.1-5 [9550 kB] Get: 53 http://deb.debian.org/debian trixie/main i386 libxml2 i386 2.12.7+dfsg+really2.9.14-0.1 [733 kB] Get: 54 http://deb.debian.org/debian trixie/main i386 shared-mime-info i386 2.4-5+b1 [761 kB] Get: 55 http://deb.debian.org/debian trixie/main i386 libjpeg62-turbo i386 1:2.1.5-3 [169 kB] Get: 56 http://deb.debian.org/debian trixie/main i386 libpng16-16t64 i386 1.6.44-2 [288 kB] Get: 57 http://deb.debian.org/debian trixie/main i386 libdeflate0 i386 1.22-1 [48.1 kB] Get: 58 http://deb.debian.org/debian trixie/main i386 libjbig0 i386 2.1-6.1+b1 [31.8 kB] Get: 59 http://deb.debian.org/debian trixie/main i386 liblerc4 i386 4.0.0+ds-4+b1 [180 kB] Get: 60 http://deb.debian.org/debian trixie/main i386 libsharpyuv0 i386 1.4.0-0.1 [113 kB] Get: 61 http://deb.debian.org/debian trixie/main i386 libwebp7 i386 1.4.0-0.1 [318 kB] Get: 62 http://deb.debian.org/debian trixie/main i386 libtiff6 i386 4.5.1+git230720-5 [339 kB] Get: 63 http://deb.debian.org/debian trixie/main i386 libgdk-pixbuf-2.0-0 i386 2.42.12+dfsg-1 [147 kB] Get: 64 http://deb.debian.org/debian trixie/main i386 gtk-update-icon-cache i386 4.16.3+ds-2 [50.5 kB] Get: 65 http://deb.debian.org/debian trixie/main i386 hicolor-icon-theme all 0.18-1 [12.0 kB] Get: 66 http://deb.debian.org/debian trixie/main i386 adwaita-icon-theme all 47.0-2 [463 kB] Get: 67 http://deb.debian.org/debian trixie/main i386 ca-certificates-java all 20240118 [11.6 kB] Get: 68 http://deb.debian.org/debian trixie/main i386 java-common all 0.76 [6776 B] Get: 69 http://deb.debian.org/debian trixie/main i386 liblcms2-2 i386 2.16-2 [171 kB] Get: 70 http://deb.debian.org/debian trixie/main i386 libnspr4 i386 2:4.35-1.1+b1 [118 kB] Get: 71 http://deb.debian.org/debian trixie/main i386 libnss3 i386 2:3.105-2 [1504 kB] Get: 72 http://deb.debian.org/debian trixie/main i386 libpcsclite1 i386 2.3.0-2 [57.0 kB] Get: 73 http://deb.debian.org/debian trixie/main i386 openjdk-21-jre-headless i386 21.0.5+11-1 [43.2 MB] Get: 74 http://deb.debian.org/debian trixie/main i386 default-jre-headless i386 2:1.21-76 [3192 B] Get: 75 http://deb.debian.org/debian trixie/main i386 ant all 1.10.15-1 [2163 kB] Get: 76 http://deb.debian.org/debian trixie/main i386 at-spi2-common all 2.54.0-1 [170 kB] Get: 77 http://deb.debian.org/debian trixie/main i386 m4 i386 1.4.19-4 [293 kB] Get: 78 http://deb.debian.org/debian trixie/main i386 autoconf all 2.72-3 [493 kB] Get: 79 http://deb.debian.org/debian trixie/main i386 autotools-dev all 20220109.1 [51.6 kB] Get: 80 http://deb.debian.org/debian trixie/main i386 automake all 1:1.16.5-1.3 [823 kB] Get: 81 http://deb.debian.org/debian trixie/main i386 autopoint all 0.22.5-2 [723 kB] Get: 82 http://deb.debian.org/debian trixie/main i386 cup all 0.11b-20160615-2 [155 kB] Get: 83 http://deb.debian.org/debian trixie/main i386 dbus-user-session i386 1.14.10-4+b1 [79.1 kB] Get: 84 http://deb.debian.org/debian trixie/main i386 libdconf1 i386 0.40.0-4+b2 [43.6 kB] Get: 85 http://deb.debian.org/debian trixie/main i386 dconf-service i386 0.40.0-4+b2 [35.0 kB] Get: 86 http://deb.debian.org/debian trixie/main i386 dconf-gsettings-backend i386 0.40.0-4+b2 [30.7 kB] Get: 87 http://deb.debian.org/debian trixie/main i386 libdebhelper-perl all 13.20 [89.7 kB] Get: 88 http://deb.debian.org/debian trixie/main i386 libtool all 2.4.7-7 [517 kB] Get: 89 http://deb.debian.org/debian trixie/main i386 dh-autoreconf all 20 [17.1 kB] Get: 90 http://deb.debian.org/debian trixie/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 91 http://deb.debian.org/debian trixie/main i386 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 92 http://deb.debian.org/debian trixie/main i386 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 93 http://deb.debian.org/debian trixie/main i386 libelf1t64 i386 0.191-2 [194 kB] Get: 94 http://deb.debian.org/debian trixie/main i386 dwz i386 0.15-1+b1 [116 kB] Get: 95 http://deb.debian.org/debian trixie/main i386 gettext i386 0.22.5-2 [1631 kB] Get: 96 http://deb.debian.org/debian trixie/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 97 http://deb.debian.org/debian trixie/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 98 http://deb.debian.org/debian trixie/main i386 debhelper all 13.20 [915 kB] Get: 99 http://deb.debian.org/debian trixie/main i386 libatk1.0-0t64 i386 2.54.0-1 [51.0 kB] Get: 100 http://deb.debian.org/debian trixie/main i386 libxau6 i386 1:1.0.9-1+b1 [18.5 kB] Get: 101 http://deb.debian.org/debian trixie/main i386 libxdmcp6 i386 1:1.1.2-3+b1 [24.8 kB] Get: 102 http://deb.debian.org/debian trixie/main i386 libxcb1 i386 1.17.0-2 [148 kB] Get: 103 http://deb.debian.org/debian trixie/main i386 libx11-data all 2:1.8.7-1 [328 kB] Get: 104 http://deb.debian.org/debian trixie/main i386 libx11-6 i386 2:1.8.7-1+b1 [822 kB] Get: 105 http://deb.debian.org/debian trixie/main i386 libxext6 i386 2:1.3.4-1+b2 [52.6 kB] Get: 106 http://deb.debian.org/debian trixie/main i386 libxi6 i386 2:1.8.2-1 [81.2 kB] Get: 107 http://deb.debian.org/debian trixie/main i386 libatspi2.0-0t64 i386 2.54.0-1 [79.8 kB] Get: 108 http://deb.debian.org/debian trixie/main i386 libatk-bridge2.0-0t64 i386 2.54.0-1 [72.5 kB] Get: 109 http://deb.debian.org/debian trixie/main i386 libbrotli1 i386 1.1.0-2+b4 [309 kB] Get: 110 http://deb.debian.org/debian trixie/main i386 libfreetype6 i386 2.13.3+dfsg-1 [464 kB] Get: 111 http://deb.debian.org/debian trixie/main i386 fonts-dejavu-mono all 2.37-8 [489 kB] Get: 112 http://deb.debian.org/debian trixie/main i386 fonts-dejavu-core all 2.37-8 [840 kB] Get: 113 http://deb.debian.org/debian trixie/main i386 libfontenc1 i386 1:1.1.8-1 [23.1 kB] Get: 114 http://deb.debian.org/debian trixie/main i386 x11-common all 1:7.7+23.1 [216 kB] Get: 115 http://deb.debian.org/debian trixie/main i386 xfonts-encodings all 1:1.0.4-2.2 [577 kB] Get: 116 http://deb.debian.org/debian trixie/main i386 xfonts-utils i386 1:7.7+7 [95.1 kB] Get: 117 http://deb.debian.org/debian trixie/main i386 fonts-urw-base35 all 20200910-8 [10.8 MB] Get: 118 http://deb.debian.org/debian trixie/main i386 fontconfig-config i386 2.15.0-1.1 [317 kB] Get: 119 http://deb.debian.org/debian trixie/main i386 libfontconfig1 i386 2.15.0-1.1 [401 kB] Get: 120 http://deb.debian.org/debian trixie/main i386 libpixman-1-0 i386 0.42.2-1+b1 [555 kB] Get: 121 http://deb.debian.org/debian trixie/main i386 libxcb-render0 i386 1.17.0-2 [116 kB] Get: 122 http://deb.debian.org/debian trixie/main i386 libxcb-shm0 i386 1.17.0-2 [105 kB] Get: 123 http://deb.debian.org/debian trixie/main i386 libxrender1 i386 1:0.9.10-1.1+b1 [28.8 kB] Get: 124 http://deb.debian.org/debian trixie/main i386 libcairo2 i386 1.18.2-2 [591 kB] Get: 125 http://deb.debian.org/debian trixie/main i386 libcairo-gobject2 i386 1.18.2-2 [129 kB] Get: 126 http://deb.debian.org/debian trixie/main i386 libcloudproviders0 i386 0.3.6-1 [30.5 kB] Get: 127 http://deb.debian.org/debian trixie/main i386 libcolord2 i386 1.4.7-1+b1 [145 kB] Get: 128 http://deb.debian.org/debian trixie/main i386 libavahi-common-data i386 0.8-13+b2 [112 kB] Get: 129 http://deb.debian.org/debian trixie/main i386 libavahi-common3 i386 0.8-13+b2 [45.3 kB] Get: 130 http://deb.debian.org/debian trixie/main i386 libavahi-client3 i386 0.8-13+b2 [49.3 kB] Get: 131 http://deb.debian.org/debian trixie/main i386 libcups2t64 i386 2.4.10-2 [267 kB] Get: 132 http://deb.debian.org/debian trixie/main i386 libepoxy0 i386 1.5.10-2 [196 kB] Get: 133 http://deb.debian.org/debian trixie/main i386 libfribidi0 i386 1.0.15-1 [72.4 kB] Get: 134 http://deb.debian.org/debian trixie/main i386 libgraphite2-3 i386 1.3.14-2 [77.7 kB] Get: 135 http://deb.debian.org/debian trixie/main i386 libharfbuzz0b i386 10.0.1-1 [503 kB] Get: 136 http://deb.debian.org/debian trixie/main i386 fontconfig i386 2.15.0-1.1 [462 kB] Get: 137 http://deb.debian.org/debian trixie/main i386 libthai-data all 0.1.29-2 [168 kB] Get: 138 http://deb.debian.org/debian trixie/main i386 libdatrie1 i386 0.2.13-3 [39.5 kB] Get: 139 http://deb.debian.org/debian trixie/main i386 libthai0 i386 0.1.29-2 [50.1 kB] Get: 140 http://deb.debian.org/debian trixie/main i386 libpango-1.0-0 i386 1.54.0+ds-3 [230 kB] Get: 141 http://deb.debian.org/debian trixie/main i386 libpangoft2-1.0-0 i386 1.54.0+ds-3 [58.1 kB] Get: 142 http://deb.debian.org/debian trixie/main i386 libpangocairo-1.0-0 i386 1.54.0+ds-3 [36.1 kB] Get: 143 http://deb.debian.org/debian trixie/main i386 libwayland-client0 i386 1.23.0-1 [26.9 kB] Get: 144 http://deb.debian.org/debian trixie/main i386 libwayland-cursor0 i386 1.23.0-1 [12.0 kB] Get: 145 http://deb.debian.org/debian trixie/main i386 libwayland-egl1 i386 1.23.0-1 [5468 B] Get: 146 http://deb.debian.org/debian trixie/main i386 libxcomposite1 i386 1:0.4.5-1+b1 [15.2 kB] Get: 147 http://deb.debian.org/debian trixie/main i386 libxfixes3 i386 1:6.0.0-2+b1 [20.7 kB] Get: 148 http://deb.debian.org/debian trixie/main i386 libxcursor1 i386 1:1.2.2-1 [38.5 kB] Get: 149 http://deb.debian.org/debian trixie/main i386 libxdamage1 i386 1:1.1.6-1+b1 [15.6 kB] Get: 150 http://deb.debian.org/debian trixie/main i386 libxinerama1 i386 2:1.1.4-3+b1 [16.3 kB] Get: 151 http://deb.debian.org/debian trixie/main i386 xkb-data all 2.42-1 [790 kB] Get: 152 http://deb.debian.org/debian trixie/main i386 libxkbcommon0 i386 1.6.0-1+b1 [115 kB] Get: 153 http://deb.debian.org/debian trixie/main i386 libxrandr2 i386 2:1.5.4-1 [37.7 kB] Get: 154 http://deb.debian.org/debian trixie/main i386 libgtk-3-common all 3.24.43-4 [4657 kB] Get: 155 http://deb.debian.org/debian trixie/main i386 libgtk-3-0t64 i386 3.24.43-4 [2920 kB] Get: 156 http://deb.debian.org/debian trixie/main i386 libglvnd0 i386 1.7.0-1+b1 [44.4 kB] Get: 157 http://deb.debian.org/debian trixie/main i386 libdrm-common all 2.4.123-1 [8084 B] Get: 158 http://deb.debian.org/debian trixie/main i386 libdrm2 i386 2.4.123-1 [41.8 kB] Get: 159 http://deb.debian.org/debian trixie/main i386 libglapi-mesa i386 24.2.4-1 [37.8 kB] Get: 160 http://deb.debian.org/debian trixie/main i386 libx11-xcb1 i386 2:1.8.7-1+b1 [232 kB] Get: 161 http://deb.debian.org/debian trixie/main i386 libxcb-dri2-0 i386 1.17.0-2 [107 kB] Get: 162 http://deb.debian.org/debian trixie/main i386 libxcb-dri3-0 i386 1.17.0-2 [107 kB] Get: 163 http://deb.debian.org/debian trixie/main i386 libxcb-glx0 i386 1.17.0-2 [123 kB] Get: 164 http://deb.debian.org/debian trixie/main i386 libxcb-present0 i386 1.17.0-2 [105 kB] Get: 165 http://deb.debian.org/debian trixie/main i386 libxcb-randr0 i386 1.17.0-2 [118 kB] Get: 166 http://deb.debian.org/debian trixie/main i386 libxcb-sync1 i386 1.17.0-2 [109 kB] Get: 167 http://deb.debian.org/debian trixie/main i386 libxcb-xfixes0 i386 1.17.0-2 [109 kB] Get: 168 http://deb.debian.org/debian trixie/main i386 libxshmfence1 i386 1.3-1+b1 [9028 B] Get: 169 http://deb.debian.org/debian trixie/main i386 libxxf86vm1 i386 1:1.1.4-1+b3 [20.1 kB] Get: 170 http://deb.debian.org/debian trixie/main i386 libdrm-amdgpu1 i386 2.4.123-1 [25.0 kB] Get: 171 http://deb.debian.org/debian trixie/main i386 libpciaccess0 i386 0.17-3+b1 [53.8 kB] Get: 172 http://deb.debian.org/debian trixie/main i386 libdrm-intel1 i386 2.4.123-1 [66.8 kB] Get: 173 http://deb.debian.org/debian trixie/main i386 libdrm-radeon1 i386 2.4.123-1 [23.0 kB] Get: 174 http://deb.debian.org/debian trixie/main i386 libedit2 i386 3.1-20240808-1 [98.0 kB] Get: 175 http://deb.debian.org/debian trixie/main i386 libz3-4 i386 4.8.12-3.1+b2 [7989 kB] Get: 176 http://deb.debian.org/debian trixie/main i386 libllvm19 i386 1:19.1.2-1 [30.4 MB] Get: 177 http://deb.debian.org/debian trixie/main i386 libsensors-config all 1:3.6.0-10 [14.6 kB] Get: 178 http://deb.debian.org/debian trixie/main i386 libsensors5 i386 1:3.6.0-10 [35.5 kB] Get: 179 http://deb.debian.org/debian trixie/main i386 mesa-libgallium i386 24.2.4-1 [9401 kB] Get: 180 http://deb.debian.org/debian trixie/main i386 libvulkan1 i386 1.3.296.0-1 [136 kB] Get: 181 http://deb.debian.org/debian trixie/main i386 libwayland-server0 i386 1.23.0-1 [35.5 kB] Get: 182 http://deb.debian.org/debian trixie/main i386 libgbm1 i386 24.2.4-1 [43.8 kB] Get: 183 http://deb.debian.org/debian trixie/main i386 libgl1-mesa-dri i386 24.2.4-1 [42.4 kB] Get: 184 http://deb.debian.org/debian trixie/main i386 libglx-mesa0 i386 24.2.4-1 [160 kB] Get: 185 http://deb.debian.org/debian trixie/main i386 libglx0 i386 1.7.0-1+b1 [38.0 kB] Get: 186 http://deb.debian.org/debian trixie/main i386 libgl1 i386 1.7.0-1+b1 [82.7 kB] Get: 187 http://deb.debian.org/debian trixie/main i386 libasound2-data all 1.2.12-1 [21.0 kB] Get: 188 http://deb.debian.org/debian trixie/main i386 libasound2t64 i386 1.2.12-1 [395 kB] Get: 189 http://deb.debian.org/debian trixie/main i386 libgif7 i386 5.2.2-1 [45.3 kB] Get: 190 http://deb.debian.org/debian trixie/main i386 libxtst6 i386 2:1.2.3-1.1+b1 [26.5 kB] Get: 191 http://deb.debian.org/debian trixie/main i386 openjdk-21-jre i386 21.0.5+11-1 [203 kB] Get: 192 http://deb.debian.org/debian trixie/main i386 default-jre i386 2:1.21-76 [1068 B] Get: 193 http://deb.debian.org/debian trixie/main i386 openjdk-21-jdk-headless i386 21.0.5+11-1 [85.4 MB] Get: 194 http://deb.debian.org/debian trixie/main i386 default-jdk-headless i386 2:1.21-76 [1124 B] Get: 195 http://deb.debian.org/debian trixie/main i386 openjdk-21-jdk i386 21.0.5+11-1 [4309 kB] Get: 196 http://deb.debian.org/debian trixie/main i386 default-jdk i386 2:1.21-76 [1076 B] Get: 197 http://deb.debian.org/debian trixie/main i386 fonts-lmodern all 2.005-1 [4540 kB] Get: 198 http://deb.debian.org/debian trixie/main i386 libgs-common all 10.04.0~dfsg-1 [148 kB] Get: 199 http://deb.debian.org/debian trixie/main i386 libgs10-common all 10.04.0~dfsg-1 [474 kB] Get: 200 http://deb.debian.org/debian trixie/main i386 libidn12 i386 1.42-2 [81.3 kB] Get: 201 http://deb.debian.org/debian trixie/main i386 libijs-0.35 i386 0.35-15.1+b1 [15.7 kB] Get: 202 http://deb.debian.org/debian trixie/main i386 libjbig2dec0 i386 0.20-1+b2 [66.5 kB] Get: 203 http://deb.debian.org/debian trixie/main i386 libopenjp2-7 i386 2.5.0-2+b3 [197 kB] Get: 204 http://deb.debian.org/debian trixie/main i386 libpaper1 i386 1.1.29+b1 [13.0 kB] Get: 205 http://deb.debian.org/debian trixie/main i386 libice6 i386 2:1.0.10-1+b1 [58.6 kB] Get: 206 http://deb.debian.org/debian trixie/main i386 libsm6 i386 2:1.2.3-1+b1 [33.9 kB] Get: 207 http://deb.debian.org/debian trixie/main i386 libxt6t64 i386 1:1.2.1-1.2 [193 kB] Get: 208 http://deb.debian.org/debian trixie/main i386 libgs10 i386 10.04.0~dfsg-1 [2708 kB] Get: 209 http://deb.debian.org/debian trixie/main i386 ghostscript i386 10.04.0~dfsg-1 [50.3 kB] Get: 210 http://deb.debian.org/debian trixie/main i386 jflex all 1.7.0-3 [1716 kB] Get: 211 http://deb.debian.org/debian trixie/main i386 libapache-pom-java all 29-2 [5276 B] Get: 212 http://deb.debian.org/debian trixie/main i386 libcommons-parent-java all 56-1 [10.8 kB] Get: 213 http://deb.debian.org/debian trixie/main i386 libcommons-logging-java all 1.3.0-1 [68.6 kB] Get: 214 http://deb.debian.org/debian trixie/main i386 libfontbox-java all 1:1.8.16-5 [211 kB] Get: 215 http://deb.debian.org/debian trixie/main i386 libkpathsea6 i386 2024.20240313.70630+ds-4 [160 kB] Get: 216 http://deb.debian.org/debian trixie/main i386 libmpfi0 i386 1.5.4+ds-3 [38.5 kB] Get: 217 http://deb.debian.org/debian trixie/main i386 libpaper-utils i386 1.1.29+b1 [9280 B] Get: 218 http://deb.debian.org/debian trixie/main i386 libpdfbox-java all 1:1.8.16-5 [5527 kB] Get: 219 http://deb.debian.org/debian trixie/main i386 libpotrace0 i386 1.16-2+b1 [24.2 kB] Get: 220 http://deb.debian.org/debian trixie/main i386 libptexenc1 i386 2024.20240313.70630+ds-4 [50.0 kB] Get: 221 http://deb.debian.org/debian trixie/main i386 libsynctex2 i386 2024.20240313.70630+ds-4 [65.5 kB] Get: 222 http://deb.debian.org/debian trixie/main i386 libteckit0 i386 2.5.12+ds1-1 [284 kB] Get: 223 http://deb.debian.org/debian trixie/main i386 libtexlua53-5 i386 2024.20240313.70630+ds-4 [129 kB] Get: 224 http://deb.debian.org/debian trixie/main i386 libxmu6 i386 2:1.1.3-3+b2 [60.5 kB] Get: 225 http://deb.debian.org/debian trixie/main i386 libxpm4 i386 1:3.5.17-1+b1 [57.8 kB] Get: 226 http://deb.debian.org/debian trixie/main i386 libxaw7 i386 2:1.0.14-1+b2 [208 kB] Get: 227 http://deb.debian.org/debian trixie/main i386 libzzip-0-13t64 i386 0.13.72+dfsg.1-1.2+b1 [58.1 kB] Get: 228 http://deb.debian.org/debian trixie/main i386 tex-common all 6.18 [32.5 kB] Get: 229 http://deb.debian.org/debian trixie/main i386 preview-latex-style all 13.2-1 [350 kB] Get: 230 http://deb.debian.org/debian trixie/main i386 t1utils i386 1.41-4 [62.3 kB] Get: 231 http://deb.debian.org/debian trixie/main i386 texlive-binaries i386 2024.20240313.70630+ds-4 [8377 kB] Get: 232 http://deb.debian.org/debian trixie/main i386 xdg-utils all 1.1.3-4.1 [75.5 kB] Get: 233 http://deb.debian.org/debian trixie/main i386 texlive-base all 2024.20240829-2 [22.7 MB] Get: 234 http://deb.debian.org/debian trixie/main i386 texlive-latex-base all 2024.20240829-2 [1273 kB] Get: 235 http://deb.debian.org/debian trixie/main i386 texlive-latex-recommended all 2024.20240829-2 [8845 kB] Get: 236 http://deb.debian.org/debian trixie/main i386 texlive-pictures all 2024.20240829-2 [17.0 MB] Get: 237 http://deb.debian.org/debian trixie/main i386 texlive-latex-extra all 2024.20240829-1 [20.9 MB] Fetched 357 MB in 10s (35.9 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libapparmor1:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19934 files and directories currently installed.) Preparing to unpack .../libapparmor1_3.1.7-1+b1_i386.deb ... Unpacking libapparmor1:i386 (3.1.7-1+b1) ... Selecting previously unselected package libsystemd-shared:i386. Preparing to unpack .../libsystemd-shared_256.7-2_i386.deb ... Unpacking libsystemd-shared:i386 (256.7-2) ... Selecting previously unselected package systemd. Preparing to unpack .../systemd_256.7-2_i386.deb ... Unpacking systemd (256.7-2) ... Setting up libapparmor1:i386 (3.1.7-1+b1) ... Setting up libsystemd-shared:i386 (256.7-2) ... Setting up systemd (256.7-2) ... Created symlink '/etc/systemd/system/getty.target.wants/getty@tty1.service' -> '/usr/lib/systemd/system/getty@.service'. Created symlink '/etc/systemd/system/multi-user.target.wants/remote-fs.target' -> '/usr/lib/systemd/system/remote-fs.target'. Created symlink '/etc/systemd/system/sysinit.target.wants/systemd-pstore.service' -> '/usr/lib/systemd/system/systemd-pstore.service'. Initializing machine ID from random generator. Creating group 'systemd-journal' with GID 999. Creating group 'systemd-network' with GID 998. Creating user 'systemd-network' (systemd Network Management) with UID 998 and GID 998. /usr/lib/tmpfiles.d/legacy.conf:13: Duplicate line for path "/run/lock", ignoring. Selecting previously unselected package systemd-sysv. (Reading database ... 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Unpacking dbus-bin (1.14.10-4+b1) ... Selecting previously unselected package dbus-session-bus-common. Preparing to unpack .../03-dbus-session-bus-common_1.14.10-4_all.deb ... Unpacking dbus-session-bus-common (1.14.10-4) ... Selecting previously unselected package libexpat1:i386. Preparing to unpack .../04-libexpat1_2.6.3-1_i386.deb ... Unpacking libexpat1:i386 (2.6.3-1) ... Selecting previously unselected package dbus-daemon. Preparing to unpack .../05-dbus-daemon_1.14.10-4+b1_i386.deb ... Unpacking dbus-daemon (1.14.10-4+b1) ... Selecting previously unselected package dbus-system-bus-common. Preparing to unpack .../06-dbus-system-bus-common_1.14.10-4_all.deb ... Unpacking dbus-system-bus-common (1.14.10-4) ... Selecting previously unselected package dbus. Preparing to unpack .../07-dbus_1.14.10-4+b1_i386.deb ... Unpacking dbus (1.14.10-4+b1) ... Selecting previously unselected package poppler-data. Preparing to unpack .../08-poppler-data_0.4.12-1_all.deb ... Unpacking poppler-data (0.4.12-1) ... Selecting previously unselected package libpython3.12-minimal:i386. Preparing to unpack .../09-libpython3.12-minimal_3.12.6-1_i386.deb ... Unpacking libpython3.12-minimal:i386 (3.12.6-1) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../10-python3.12-minimal_3.12.6-1_i386.deb ... Unpacking python3.12-minimal (3.12.6-1) ... Setting up libpython3.12-minimal:i386 (3.12.6-1) ... Setting up libexpat1:i386 (2.6.3-1) ... Setting up python3.12-minimal (3.12.6-1) ... Selecting previously unselected package python3-minimal. (Reading database ... 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Selecting previously unselected package libgssapi-krb5-2:i386. Preparing to unpack .../09-libgssapi-krb5-2_1.21.3-3_i386.deb ... Unpacking libgssapi-krb5-2:i386 (1.21.3-3) ... Selecting previously unselected package libtirpc-common. Preparing to unpack .../10-libtirpc-common_1.3.4+ds-1.3_all.deb ... Unpacking libtirpc-common (1.3.4+ds-1.3) ... Selecting previously unselected package libtirpc3t64:i386. Preparing to unpack .../11-libtirpc3t64_1.3.4+ds-1.3_i386.deb ... Adding 'diversion of /lib/i386-linux-gnu/libtirpc.so.3 to /lib/i386-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' Adding 'diversion of /lib/i386-linux-gnu/libtirpc.so.3.0.0 to /lib/i386-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Unpacking libtirpc3t64:i386 (1.3.4+ds-1.3) ... Selecting previously unselected package libnsl2:i386. Preparing to unpack .../12-libnsl2_1.3.0-3+b2_i386.deb ... Unpacking libnsl2:i386 (1.3.0-3+b2) ... Selecting previously unselected package readline-common. Preparing to unpack .../13-readline-common_8.2-5_all.deb ... Unpacking readline-common (8.2-5) ... Selecting previously unselected package libreadline8t64:i386. Preparing to unpack .../14-libreadline8t64_8.2-5_i386.deb ... Adding 'diversion of /lib/i386-linux-gnu/libhistory.so.8 to /lib/i386-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libhistory.so.8.2 to /lib/i386-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libreadline.so.8 to /lib/i386-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libreadline.so.8.2 to /lib/i386-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:i386 (8.2-5) ... Selecting previously unselected package libpython3.12-stdlib:i386. Preparing to unpack .../15-libpython3.12-stdlib_3.12.6-1_i386.deb ... Unpacking libpython3.12-stdlib:i386 (3.12.6-1) ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 22906 files and directories currently installed.) Preparing to unpack .../000-python3_3.12.6-1_i386.deb ... Unpacking python3 (3.12.6-1) ... Selecting previously unselected package libproc2-0:i386. Preparing to unpack .../001-libproc2-0_2%3a4.0.4-6_i386.deb ... Unpacking libproc2-0:i386 (2:4.0.4-6) ... Selecting previously unselected package procps. Preparing to unpack .../002-procps_2%3a4.0.4-6_i386.deb ... Unpacking procps (2:4.0.4-6) ... 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No diversion 'diversion of /usr/share/man/man8/update-icon-caches.8.gz to /usr/share/man/man8/update-icon-caches.gtk2.8.gz by libgtk-3-bin', none removed. Unpacking gtk-update-icon-cache (4.16.3+ds-2) ... Selecting previously unselected package hicolor-icon-theme. Preparing to unpack .../032-hicolor-icon-theme_0.18-1_all.deb ... Unpacking hicolor-icon-theme (0.18-1) ... Selecting previously unselected package adwaita-icon-theme. Preparing to unpack .../033-adwaita-icon-theme_47.0-2_all.deb ... Unpacking adwaita-icon-theme (47.0-2) ... Selecting previously unselected package ca-certificates-java. Preparing to unpack .../034-ca-certificates-java_20240118_all.deb ... Unpacking ca-certificates-java (20240118) ... Selecting previously unselected package java-common. Preparing to unpack .../035-java-common_0.76_all.deb ... Unpacking java-common (0.76) ... Selecting previously unselected package liblcms2-2:i386. Preparing to unpack .../036-liblcms2-2_2.16-2_i386.deb ... Unpacking liblcms2-2:i386 (2.16-2) ... Selecting previously unselected package libnspr4:i386. Preparing to unpack .../037-libnspr4_2%3a4.35-1.1+b1_i386.deb ... Unpacking libnspr4:i386 (2:4.35-1.1+b1) ... Selecting previously unselected package libnss3:i386. Preparing to unpack .../038-libnss3_2%3a3.105-2_i386.deb ... Unpacking libnss3:i386 (2:3.105-2) ... Selecting previously unselected package libpcsclite1:i386. Preparing to unpack .../039-libpcsclite1_2.3.0-2_i386.deb ... Unpacking libpcsclite1:i386 (2.3.0-2) ... Selecting previously unselected package openjdk-21-jre-headless:i386. Preparing to unpack .../040-openjdk-21-jre-headless_21.0.5+11-1_i386.deb ... Unpacking openjdk-21-jre-headless:i386 (21.0.5+11-1) ... Selecting previously unselected package default-jre-headless. Preparing to unpack .../041-default-jre-headless_2%3a1.21-76_i386.deb ... Unpacking default-jre-headless (2:1.21-76) ... Selecting previously unselected package ant. 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Setting up libpipeline1:i386 (1.5.8-1) ... Setting up libgraphite2-3:i386 (1.3.14-2) ... Setting up liblcms2-2:i386 (2.16-2) ... Setting up libpixman-1-0:i386 (0.42.2-1+b1) ... Setting up libsharpyuv0:i386 (1.4.0-0.1) ... Setting up libwayland-server0:i386 (1.23.0-1) ... Setting up libpciaccess0:i386 (0.17-3+b1) ... Setting up systemd-sysv (256.7-2) ... Setting up libxau6:i386 (1:1.0.9-1+b1) ... Setting up libxdmcp6:i386 (1:1.1.2-3+b1) ... Setting up libkeyutils1:i386 (1.6.3-4) ... Setting up libxcb1:i386 (1.17.0-2) ... Setting up libicu72:i386 (72.1-5) ... Setting up libxcb-xfixes0:i386 (1.17.0-2) ... Setting up liblerc4:i386 (4.0.0+ds-4+b1) ... Setting up bsdextrautils (2.40.2-9) ... Setting up hicolor-icon-theme (0.18-1) ... Setting up java-common (0.76) ... Setting up libdatrie1:i386 (0.2.13-3) ... Setting up libmagic-mgc (1:5.45-3) ... Setting up libxcb-render0:i386 (1.17.0-2) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libglvnd0:i386 (1.7.0-1+b1) ... Setting up libtirpc-common (1.3.4+ds-1.3) ... Setting up libijs-0.35:i386 (0.35-15.1+b1) ... Setting up libxcb-glx0:i386 (1.17.0-2) ... Setting up libdebhelper-perl (13.20) ... Setting up libgs-common (10.04.0~dfsg-1) ... Setting up libbrotli1:i386 (1.1.0-2+b4) ... Setting up libfontbox-java (1:1.8.16-5) ... Setting up libedit2:i386 (3.1-20240808-1) ... Setting up libgdk-pixbuf2.0-common (2.42.12+dfsg-1) ... Setting up libmagic1t64:i386 (1:5.45-3) ... Setting up x11-common (1:7.7+23.1) ... Running in chroot, ignoring request. Setting up X socket directories... /tmp/.X11-unix /tmp/.ICE-unix. Setting up libsensors-config (1:3.6.0-10) ... Setting up libdeflate0:i386 (1.22-1) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up xkb-data (2.42-1) ... Setting up libxcb-shm0:i386 (1.17.0-2) ... Setting up libcom-err2:i386 (1.47.1-1) ... Setting up file (1:5.45-3) ... Setting up libjbig0:i386 (2.1-6.1+b1) ... Setting up libelf1t64:i386 (0.191-2) ... Setting up poppler-data (0.4.12-1) ... Setting up libkrb5support0:i386 (1.21.3-3) ... Setting up tzdata (2024a-4) ... Current default time zone: 'Etc/UTC' Local time is now: Sun Oct 27 14:46:54 UTC 2024. Universal Time is now: Sun Oct 27 14:46:54 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libxcb-present0:i386 (1.17.0-2) ... Setting up libasound2-data (1.2.12-1) ... Setting up libfontenc1:i386 (1:1.1.8-1) ... Setting up autotools-dev (20220109.1) ... Setting up libz3-4:i386 (4.8.12-3.1+b2) ... Setting up libglib2.0-0t64:i386 (2.82.1-1) ... Setting up libasound2t64:i386 (1.2.12-1) ... Setting up libjpeg62-turbo:i386 (1:2.1.5-3) ... Setting up libzzip-0-13t64:i386 (0.13.72+dfsg.1-1.2+b1) ... Setting up libx11-data (2:1.8.7-1) ... Setting up libepoxy0:i386 (1.5.10-2) ... Setting up libnspr4:i386 (2:4.35-1.1+b1) ... Setting up libxcb-sync1:i386 (1.17.0-2) ... Setting up libjbig2dec0:i386 (0.20-1+b2) ... Setting up libteckit0:i386 (2.5.12+ds1-1) ... Setting up libapache-pom-java (29-2) ... Setting up libavahi-common-data:i386 (0.8-13+b2) ... Setting up libdbus-1-3:i386 (1.14.10-4+b1) ... Setting up xfonts-encodings (1:1.0.4-2.2) ... Setting up libfribidi0:i386 (1.0.15-1) ... Setting up t1utils (1.41-4) ... Setting up libtexlua53-5:i386 (2024.20240313.70630+ds-4) ... Setting up libproc2-0:i386 (2:4.0.4-6) ... Setting up fonts-dejavu-mono (2.37-8) ... Setting up libpng16-16t64:i386 (1.6.44-2) ... Setting up libidn12:i386 (1.42-2) ... Setting up autopoint (0.22.5-2) ... Setting up libmpfi0:i386 (1.5.4+ds-3) ... Setting up fonts-dejavu-core (2.37-8) ... Setting up libpcsclite1:i386 (2.3.0-2) ... Setting up libsensors5:i386 (1:3.6.0-10) ... Setting up libk5crypto3:i386 (1.21.3-3) ... Setting up libglapi-mesa:i386 (24.2.4-1) ... Setting up libkpathsea6:i386 (2024.20240313.70630+ds-4) ... Setting up libvulkan1:i386 (1.3.296.0-1) ... Setting up autoconf (2.72-3) ... Setting up libwebp7:i386 (1.4.0-0.1) ... Setting up libxcb-dri2-0:i386 (1.17.0-2) ... Setting up libgif7:i386 (5.2.2-1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libxshmfence1:i386 (1.3-1+b1) ... Setting up at-spi2-common (2.54.0-1) ... Setting up libtiff6:i386 (4.5.1+git230720-5) ... Setting up libxcb-randr0:i386 (1.17.0-2) ... Setting up dbus-session-bus-common (1.14.10-4) ... Setting up libuchardet0:i386 (0.0.8-1+b1) ... Setting up procps (2:4.0.4-6) ... Setting up fonts-lmodern (2.005-1) ... Setting up libopenjp2-7:i386 (2.5.0-2+b3) ... Setting up libx11-6:i386 (2:1.8.7-1+b1) ... Setting up libthai-data (0.1.29-2) ... Setting up netbase (6.4) ... Setting up libkrb5-3:i386 (1.21.3-3) ... Setting up libwayland-egl1:i386 (1.23.0-1) ... Setting up dbus-system-bus-common (1.14.10-4) ... useradd: Warning: missing or non-executable shell '/usr/sbin/nologin' Setting up openssl (3.3.2-1) ... Setting up libdrm-common (2.4.123-1) ... Setting up libxcomposite1:i386 (1:0.4.5-1+b1) ... Setting up readline-common (8.2-5) ... Setting up libxml2:i386 (2.12.7+dfsg+really2.9.14-0.1) ... Setting up xdg-utils (1.1.3-4.1) ... update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode Setting up dbus-bin (1.14.10-4+b1) ... Setting up libsynctex2:i386 (2024.20240313.70630+ds-4) ... Setting up libxkbcommon0:i386 (1.6.0-1+b1) ... Setting up libpotrace0:i386 (1.16-2+b1) ... Setting up libwayland-client0:i386 (1.23.0-1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up libxcb-dri3-0:i386 (1.17.0-2) ... Setting up libllvm19:i386 (1:19.1.2-1) ... Setting up libx11-xcb1:i386 (2:1.8.7-1+b1) ... Setting up libice6:i386 (2:1.0.10-1+b1) ... Setting up gettext (0.22.5-2) ... Setting up libxdamage1:i386 (1:1.1.6-1+b1) ... Setting up libatk1.0-0t64:i386 (2.54.0-1) ... Setting up libpdfbox-java (1:1.8.16-5) ... Setting up libxpm4:i386 (1:3.5.17-1+b1) ... Setting up libxrender1:i386 (1:0.9.10-1.1+b1) ... Setting up libtool (2.4.7-7) ... Setting up fontconfig-config (2.15.0-1.1) ... Setting up libcommons-parent-java (56-1) ... Setting up libavahi-common3:i386 (0.8-13+b2) ... Setting up libcloudproviders0:i386 (0.3.6-1) ... Setting up libcommons-logging-java (1.3.0-1) ... Setting up libxext6:i386 (2:1.3.4-1+b2) ... Setting up libnss3:i386 (2:3.105-2) ... Setting up dbus-daemon (1.14.10-4+b1) ... Setting up libcolord2:i386 (1.4.7-1+b1) ... Setting up libxxf86vm1:i386 (1:1.1.4-1+b3) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libdconf1:i386 (0.40.0-4+b2) ... Setting up dh-autoreconf (20) ... Setting up libthai0:i386 (0.1.29-2) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up libptexenc1:i386 (2024.20240313.70630+ds-4) ... Setting up libfreetype6:i386 (2.13.3+dfsg-1) ... Setting up libxfixes3:i386 (1:6.0.0-2+b1) ... Setting up dbus (1.14.10-4+b1) ... Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of start. Setting up shared-mime-info (2.4-5+b1) ... Setting up libxinerama1:i386 (2:1.1.4-3+b1) ... Setting up libgssapi-krb5-2:i386 (1.21.3-3) ... Setting up libxrandr2:i386 (2:1.5.4-1) ... Setting up ucf (3.0043+nmu1) ... Setting up libreadline8t64:i386 (8.2-5) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up libdrm2:i386 (2.4.123-1) ... Setting up groff-base (1.23.0-5) ... Setting up libwayland-cursor0:i386 (1.23.0-1) ... Setting up libpam-systemd:i386 (256.7-2) ... Setting up libharfbuzz0b:i386 (10.0.1-1) ... Setting up libgdk-pixbuf-2.0-0:i386 (2.42.12+dfsg-1) ... Setting up libfontconfig1:i386 (2.15.0-1.1) ... Setting up ca-certificates-java (20240118) ... No JRE found. Skipping Java certificates setup. Setting up libsm6:i386 (2:1.2.3-1+b1) ... Setting up libavahi-client3:i386 (0.8-13+b2) ... Setting up libdrm-amdgpu1:i386 (2.4.123-1) ... Setting up libpaper1:i386 (1.1.29+b1) ... Creating config file /etc/papersize with new version Setting up gtk-update-icon-cache (4.16.3+ds-2) ... Setting up fontconfig (2.15.0-1.1) ... Regenerating fonts cache... done. Setting up openjdk-21-jre-headless:i386 (21.0.5+11-1) ... update-alternatives: using /usr/lib/jvm/java-21-openjdk-i386/bin/java to provide /usr/bin/java (java) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-i386/bin/jpackage to provide /usr/bin/jpackage (jpackage) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-i386/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-i386/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-i386/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode Setting up libxi6:i386 (2:1.8.2-1) ... Setting up libtirpc3t64:i386 (1.3.4+ds-1.3) ... Setting up libdrm-radeon1:i386 (2.4.123-1) ... Setting up libxtst6:i386 (2:1.2.3-1.1+b1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libxcursor1:i386 (1:1.2.2-1) ... Setting up libpango-1.0-0:i386 (1.54.0+ds-3) ... Setting up libdrm-intel1:i386 (2.4.123-1) ... Setting up libpaper-utils (1.1.29+b1) ... Setting up xfonts-utils (1:7.7+7) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Created symlink '/etc/systemd/system/timers.target.wants/man-db.timer' -> '/usr/lib/systemd/system/man-db.timer'. Setting up libcairo2:i386 (1.18.2-2) ... Setting up tex-common (6.18) ... update-language: texlive-base not installed and configured, doing nothing! Setting up dbus-user-session (1.14.10-4+b1) ... Setting up adwaita-icon-theme (47.0-2) ... update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode Setting up libatspi2.0-0t64:i386 (2.54.0-1) ... Setting up libxt6t64:i386 (1:1.2.1-1.2) ... Setting up libnsl2:i386 (1.3.0-3+b2) ... Setting up libcairo-gobject2:i386 (1.18.2-2) ... Setting up libpangoft2-1.0-0:i386 (1.54.0+ds-3) ... Setting up libcups2t64:i386 (2.4.10-2) ... Setting up libpangocairo-1.0-0:i386 (1.54.0+ds-3) ... Setting up libatk-bridge2.0-0t64:i386 (2.54.0-1) ... Setting up mesa-libgallium:i386 (24.2.4-1) ... Setting up libxmu6:i386 (2:1.1.3-3+b2) ... Setting up libpython3.12-stdlib:i386 (3.12.6-1) ... Setting up libgbm1:i386 (24.2.4-1) ... Setting up preview-latex-style (13.2-1) ... Setting up python3.12 (3.12.6-1) ... Setting up libgl1-mesa-dri:i386 (24.2.4-1) ... Setting up debhelper (13.20) ... Setting up dconf-service (0.40.0-4+b2) ... Setting up libxaw7:i386 (2:1.0.14-1+b2) ... Setting up fonts-urw-base35 (20200910-8) ... Setting up texlive-binaries (2024.20240313.70630+ds-4) ... update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode Setting up texlive-base (2024.20240829-2) ... tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex Setting up libpython3-stdlib:i386 (3.12.6-1) ... Setting up libgs10-common (10.04.0~dfsg-1) ... Setting up libglx-mesa0:i386 (24.2.4-1) ... Setting up libglx0:i386 (1.7.0-1+b1) ... Setting up dconf-gsettings-backend:i386 (0.40.0-4+b2) ... Setting up python3 (3.12.6-1) ... Setting up libgl1:i386 (1.7.0-1+b1) ... Setting up texlive-latex-base (2024.20240829-2) ... Setting up texlive-latex-recommended (2024.20240829-2) ... Setting up texlive-pictures (2024.20240829-2) ... Setting up libgtk-3-common (3.24.43-4) ... Setting up libgs10:i386 (10.04.0~dfsg-1) ... Setting up texlive-latex-extra (2024.20240829-1) ... Setting up ghostscript (10.04.0~dfsg-1) ... Setting up libgtk-3-0t64:i386 (3.24.43-4) ... Processing triggers for libc-bin (2.40-3) ... Processing triggers for systemd (256.7-2) ... Processing triggers for ca-certificates-java (20240118) ... Adding debian:ACCVRAIZ1.pem Adding debian:AC_RAIZ_FNMT-RCM.pem Adding debian:AC_RAIZ_FNMT-RCM_SERVIDORES_SEGUROS.pem Adding debian:ANF_Secure_Server_Root_CA.pem Adding debian:Actalis_Authentication_Root_CA.pem Adding debian:AffirmTrust_Commercial.pem Adding debian:AffirmTrust_Networking.pem Adding debian:AffirmTrust_Premium.pem Adding debian:AffirmTrust_Premium_ECC.pem Adding debian:Amazon_Root_CA_1.pem Adding debian:Amazon_Root_CA_2.pem Adding debian:Amazon_Root_CA_3.pem Adding debian:Amazon_Root_CA_4.pem Adding debian:Atos_TrustedRoot_2011.pem Adding debian:Atos_TrustedRoot_Root_CA_ECC_TLS_2021.pem Adding debian:Atos_TrustedRoot_Root_CA_RSA_TLS_2021.pem Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem Adding debian:BJCA_Global_Root_CA1.pem Adding debian:BJCA_Global_Root_CA2.pem Adding debian:Baltimore_CyberTrust_Root.pem Adding debian:Buypass_Class_2_Root_CA.pem Adding debian:Buypass_Class_3_Root_CA.pem Adding debian:CA_Disig_Root_R2.pem Adding debian:CFCA_EV_ROOT.pem Adding debian:COMODO_Certification_Authority.pem Adding debian:COMODO_ECC_Certification_Authority.pem Adding debian:COMODO_RSA_Certification_Authority.pem Adding debian:Certainly_Root_E1.pem Adding debian:Certainly_Root_R1.pem Adding debian:Certigna.pem Adding debian:Certigna_Root_CA.pem Adding debian:Certum_EC-384_CA.pem Adding debian:Certum_Trusted_Network_CA.pem Adding debian:Certum_Trusted_Network_CA_2.pem Adding debian:Certum_Trusted_Root_CA.pem Adding debian:CommScope_Public_Trust_ECC_Root-01.pem Adding debian:CommScope_Public_Trust_ECC_Root-02.pem Adding debian:CommScope_Public_Trust_RSA_Root-01.pem Adding debian:CommScope_Public_Trust_RSA_Root-02.pem Adding debian:Comodo_AAA_Services_root.pem Adding debian:D-TRUST_BR_Root_CA_1_2020.pem Adding debian:D-TRUST_EV_Root_CA_1_2020.pem Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem Adding debian:DigiCert_Assured_ID_Root_CA.pem Adding debian:DigiCert_Assured_ID_Root_G2.pem Adding debian:DigiCert_Assured_ID_Root_G3.pem Adding debian:DigiCert_Global_Root_CA.pem Adding debian:DigiCert_Global_Root_G2.pem Adding debian:DigiCert_Global_Root_G3.pem Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem Adding debian:DigiCert_TLS_ECC_P384_Root_G5.pem Adding debian:DigiCert_TLS_RSA4096_Root_G5.pem Adding debian:DigiCert_Trusted_Root_G4.pem Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem Adding debian:Entrust_Root_Certification_Authority.pem Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem Adding debian:Entrust_Root_Certification_Authority_-_G2.pem Adding debian:Entrust_Root_Certification_Authority_-_G4.pem Adding debian:GDCA_TrustAUTH_R5_ROOT.pem Adding debian:GLOBALTRUST_2020.pem Adding debian:GTS_Root_R1.pem Adding debian:GTS_Root_R2.pem Adding debian:GTS_Root_R3.pem Adding debian:GTS_Root_R4.pem Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem Adding debian:GlobalSign_Root_CA.pem Adding debian:GlobalSign_Root_CA_-_R3.pem Adding debian:GlobalSign_Root_CA_-_R6.pem Adding debian:GlobalSign_Root_E46.pem Adding debian:GlobalSign_Root_R46.pem Adding debian:Go_Daddy_Class_2_CA.pem Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem Adding debian:HARICA_TLS_ECC_Root_CA_2021.pem Adding debian:HARICA_TLS_RSA_Root_CA_2021.pem Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem Adding debian:HiPKI_Root_CA_-_G1.pem Adding debian:Hongkong_Post_Root_CA_3.pem Adding debian:ISRG_Root_X1.pem Adding debian:ISRG_Root_X2.pem Adding debian:IdenTrust_Commercial_Root_CA_1.pem Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem Adding debian:Izenpe.com.pem Adding debian:Microsec_e-Szigno_Root_CA_2009.pem Adding debian:Microsoft_ECC_Root_Certificate_Authority_2017.pem Adding debian:Microsoft_RSA_Root_Certificate_Authority_2017.pem Adding debian:NAVER_Global_Root_Certification_Authority.pem Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem Adding debian:QuoVadis_Root_CA_1_G3.pem Adding debian:QuoVadis_Root_CA_2.pem Adding debian:QuoVadis_Root_CA_2_G3.pem Adding debian:QuoVadis_Root_CA_3.pem Adding debian:QuoVadis_Root_CA_3_G3.pem Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem Adding debian:SSL.com_Root_Certification_Authority_ECC.pem Adding debian:SSL.com_Root_Certification_Authority_RSA.pem Adding debian:SSL.com_TLS_ECC_Root_CA_2022.pem Adding debian:SSL.com_TLS_RSA_Root_CA_2022.pem Adding debian:SZAFIR_ROOT_CA2.pem Adding debian:Sectigo_Public_Server_Authentication_Root_E46.pem Adding debian:Sectigo_Public_Server_Authentication_Root_R46.pem Adding debian:SecureSign_RootCA11.pem Adding debian:SecureTrust_CA.pem Adding debian:Secure_Global_CA.pem Adding debian:Security_Communication_ECC_RootCA1.pem Adding debian:Security_Communication_RootCA2.pem Adding debian:Security_Communication_RootCA3.pem Adding debian:Security_Communication_Root_CA.pem Adding debian:Starfield_Class_2_CA.pem Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem Adding debian:SwissSign_Gold_CA_-_G2.pem Adding debian:SwissSign_Silver_CA_-_G2.pem Adding debian:T-TeleSec_GlobalRoot_Class_2.pem Adding debian:T-TeleSec_GlobalRoot_Class_3.pem Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem Adding debian:TWCA_Global_Root_CA.pem Adding debian:TWCA_Root_Certification_Authority.pem Adding debian:TeliaSonera_Root_CA_v1.pem Adding debian:Telia_Root_CA_v2.pem Adding debian:TrustAsia_Global_Root_CA_G3.pem Adding debian:TrustAsia_Global_Root_CA_G4.pem Adding debian:Trustwave_Global_Certification_Authority.pem Adding debian:Trustwave_Global_ECC_P256_Certification_Authority.pem Adding debian:Trustwave_Global_ECC_P384_Certification_Authority.pem Adding debian:TunTrust_Root_CA.pem Adding debian:UCA_Extended_Validation_Root.pem Adding debian:UCA_Global_G2_Root.pem Adding debian:USERTrust_ECC_Certification_Authority.pem Adding debian:USERTrust_RSA_Certification_Authority.pem Adding debian:XRamp_Global_CA_Root.pem Adding debian:certSIGN_ROOT_CA.pem Adding debian:certSIGN_Root_CA_G2.pem Adding debian:e-Szigno_Root_CA_2017.pem Adding debian:ePKI_Root_Certification_Authority.pem Adding debian:emSign_ECC_Root_CA_-_C3.pem Adding debian:emSign_ECC_Root_CA_-_G3.pem Adding debian:emSign_Root_CA_-_C1.pem Adding debian:emSign_Root_CA_-_G1.pem Adding debian:vTrus_ECC_Root_CA.pem Adding debian:vTrus_Root_CA.pem done. Setting up openjdk-21-jre:i386 (21.0.5+11-1) ... Setting up ant (1.10.15-1) ... Setting up cup (0.11b-20160615-2) ... Setting up openjdk-21-jdk-headless:i386 (21.0.5+11-1) ... update-alternatives: using /usr/lib/jvm/java-21-openjdk-i386/bin/jar to provide /usr/bin/jar (jar) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-i386/bin/jarsigner to provide /usr/bin/jarsigner (jarsigner) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-i386/bin/javac to provide /usr/bin/javac (javac) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-i386/bin/javadoc to provide /usr/bin/javadoc (javadoc) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-i386/bin/javap to provide /usr/bin/javap (javap) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-i386/bin/jcmd to provide /usr/bin/jcmd (jcmd) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-i386/bin/jdb to provide /usr/bin/jdb (jdb) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-i386/bin/jdeprscan to provide /usr/bin/jdeprscan (jdeprscan) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-i386/bin/jdeps to provide /usr/bin/jdeps (jdeps) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-i386/bin/jfr to provide /usr/bin/jfr (jfr) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-i386/bin/jimage to provide /usr/bin/jimage (jimage) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-i386/bin/jinfo to provide /usr/bin/jinfo (jinfo) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-i386/bin/jlink to provide /usr/bin/jlink (jlink) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-i386/bin/jmap to provide /usr/bin/jmap (jmap) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-i386/bin/jmod to provide /usr/bin/jmod (jmod) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-i386/bin/jps to provide /usr/bin/jps (jps) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-i386/bin/jrunscript to provide /usr/bin/jrunscript (jrunscript) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-i386/bin/jshell to provide /usr/bin/jshell (jshell) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-i386/bin/jstack to provide /usr/bin/jstack (jstack) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-i386/bin/jstat to provide /usr/bin/jstat (jstat) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-i386/bin/jstatd to provide /usr/bin/jstatd (jstatd) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-i386/bin/jwebserver to provide /usr/bin/jwebserver (jwebserver) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-i386/bin/serialver to provide /usr/bin/serialver (serialver) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-i386/bin/jhsdb to provide /usr/bin/jhsdb (jhsdb) in auto mode Setting up default-jre-headless (2:1.21-76) ... Setting up jflex (1.7.0-3) ... Setting up default-jre (2:1.21-76) ... Setting up openjdk-21-jdk:i386 (21.0.5+11-1) ... update-alternatives: using /usr/lib/jvm/java-21-openjdk-i386/bin/jconsole to provide /usr/bin/jconsole (jconsole) in auto mode Setting up default-jdk-headless (2:1.21-76) ... Setting up default-jdk (2:1.21-76) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Processing triggers for tex-common (6.18) ... Running updmap-sys. This may take some time... done. Running mktexlsr /var/lib/texmf ... done. Building format(s) --all. This may take some time... done. Processing triggers for ca-certificates-java (20240118) ... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/weka-3.6.14/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../weka_3.6.14-4_source.changes dpkg-buildpackage: info: source package weka dpkg-buildpackage: info: source version 3.6.14-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by tony mancill dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/weka-3.6.14' rm -f wekadocs/manual/manual.aux rm -f wekadocs/manual/manual.dvi rm -f wekadocs/manual/manual.log rm -f wekadocs/manual/manual.out rm -f wekadocs/manual/manual.pdf rm -f wekadocs/manual/manual.toc dh_auto_clean ant clean Buildfile: /build/reproducible-path/weka-3.6.14/build.xml init_all: [tstamp] Honouring environment variable SOURCE_DATE_EPOCH which has been set to 1701674200 clean: [delete] Deleting directory /build/reproducible-path/weka-3.6.14/doc BUILD SUCCESSFUL Total time: 0 seconds make[1]: Leaving directory '/build/reproducible-path/weka-3.6.14' dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/weka-3.6.14' dh_auto_build -- exejar docs ant -Duser.name debian exejar docs Buildfile: /build/reproducible-path/weka-3.6.14/build.xml init_all: [tstamp] Honouring environment variable SOURCE_DATE_EPOCH which has been set to 1701674200 init_compile: [mkdir] Created dir: /build/reproducible-path/weka-3.6.14/build/classes compile: [javac] Compiling 1053 source files to /build/reproducible-path/weka-3.6.14/build/classes [javac] warning: [options] source value 8 is obsolete and will be removed in a future release [javac] warning: [options] target value 8 is obsolete and will be removed in a future release [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. [javac] Note: Some input files use or override a deprecated API. [javac] Note: Recompile with -Xlint:deprecation for details. [javac] Note: Some input files use unchecked or unsafe operations. [javac] Note: Recompile with -Xlint:unchecked for details. [javac] 3 warnings [copy] Copying 505 files to /build/reproducible-path/weka-3.6.14/build/classes init_dist: [mkdir] Created dir: /build/reproducible-path/weka-3.6.14/dist exejar: [jar] Building jar: /build/reproducible-path/weka-3.6.14/dist/weka.jar init_all: [tstamp] Honouring environment variable SOURCE_DATE_EPOCH which has been set to 1701674200 docs: [mkdir] Created dir: /build/reproducible-path/weka-3.6.14/doc [javadoc] Generating Javadoc [javadoc] Debian build on Java 9+ detected: Adding the --ignore-source-errors option [javadoc] Debian build on Java 9+ detected: Adding the -Xdoclint:none option [javadoc] Javadoc execution [javadoc] Loading source files for package weka.associations... [javadoc] Loading source files for package weka.associations.gsp... [javadoc] Loading source files for package weka.associations.tertius... [javadoc] Loading source files for package weka.attributeSelection... [javadoc] Loading source files for package weka.classifiers... [javadoc] Loading source files for package weka.classifiers.bayes... [javadoc] Loading source files for package weka.classifiers.bayes.blr... [javadoc] Loading source files for package weka.classifiers.bayes.net... [javadoc] Loading source files for package weka.classifiers.bayes.net.estimate... [javadoc] Loading source files for package weka.classifiers.bayes.net.search... [javadoc] Loading source files for package weka.classifiers.bayes.net.search.ci... [javadoc] Loading source files for package weka.classifiers.bayes.net.search.fixed... [javadoc] Loading source files for package weka.classifiers.bayes.net.search.global... [javadoc] Loading source files for package weka.classifiers.bayes.net.search.local... [javadoc] Loading source files for package weka.classifiers.evaluation... [javadoc] Loading source files for package weka.classifiers.functions... [javadoc] Loading source files for package weka.classifiers.functions.neural... [javadoc] Loading source files for package weka.classifiers.functions.pace... [javadoc] Loading source files for package weka.classifiers.functions.supportVector... [javadoc] Loading source files for package weka.classifiers.lazy... [javadoc] Loading source files for package weka.classifiers.lazy.kstar... [javadoc] Loading source files for package weka.classifiers.meta... [javadoc] Loading source files for package weka.classifiers.meta.nestedDichotomies... [javadoc] Loading source files for package weka.classifiers.mi... [javadoc] Loading source files for package weka.classifiers.mi.supportVector... [javadoc] Loading source files for package weka.classifiers.misc... [javadoc] Loading source files for package weka.classifiers.pmml.consumer... [javadoc] Loading source files for package weka.classifiers.rules... [javadoc] Loading source files for package weka.classifiers.rules.part... [javadoc] Loading source files for package weka.classifiers.trees... [javadoc] Loading source files for package weka.classifiers.trees.adtree... [javadoc] Loading source files for package weka.classifiers.trees.ft... [javadoc] Loading source files for package weka.classifiers.trees.j48... [javadoc] Loading source files for package weka.classifiers.trees.lmt... [javadoc] Loading source files for package weka.classifiers.trees.m5... [javadoc] Loading source files for package weka.classifiers.xml... [javadoc] Loading source files for package weka.clusterers... [javadoc] Loading source files for package weka.clusterers.forOPTICSAndDBScan.DataObjects... [javadoc] Loading source files for package weka.clusterers.forOPTICSAndDBScan.Databases... [javadoc] Loading source files for package weka.clusterers.forOPTICSAndDBScan.OPTICS_GUI... [javadoc] Loading source files for package weka.clusterers.forOPTICSAndDBScan.Utils... [javadoc] Loading source files for package weka.core... [javadoc] Loading source files for package weka.core.converters... [javadoc] Loading source files for package weka.core.logging... [javadoc] Loading source files for package weka.core.mathematicalexpression... [javadoc] Loading source files for package weka.core.matrix... [javadoc] Loading source files for package weka.core.neighboursearch... [javadoc] Loading source files for package weka.core.neighboursearch.balltrees... [javadoc] Loading source files for package weka.core.neighboursearch.covertrees... [javadoc] Loading source files for package weka.core.neighboursearch.kdtrees... [javadoc] Loading source files for package weka.core.pmml... [javadoc] Loading source files for package weka.core.stemmers... [javadoc] Loading source files for package weka.core.tokenizers... [javadoc] Loading source files for package weka.core.xml... [javadoc] Loading source files for package weka.datagenerators... [javadoc] Loading source files for package weka.datagenerators.classifiers.classification... [javadoc] Loading source files for package weka.datagenerators.classifiers.regression... [javadoc] Loading source files for package weka.datagenerators.clusterers... [javadoc] Loading source files for package weka.estimators... [javadoc] Loading source files for package weka.experiment... [javadoc] Loading source files for package weka.experiment.xml... [javadoc] Loading source files for package weka.filters... [javadoc] Loading source files for package weka.filters.supervised.attribute... [javadoc] Loading source files for package weka.filters.supervised.instance... [javadoc] Loading source files for package weka.filters.unsupervised.attribute... [javadoc] Loading source files for package weka.filters.unsupervised.instance... [javadoc] Loading source files for package weka.filters.unsupervised.instance.subsetbyexpression... [javadoc] Loading source files for package weka.gui... [javadoc] Loading source files for package weka.gui.arffviewer... [javadoc] Loading source files for package weka.gui.beans... [javadoc] Loading source files for package weka.gui.beans.xml... [javadoc] Loading source files for package weka.gui.boundaryvisualizer... [javadoc] Loading source files for package weka.gui.experiment... [javadoc] Loading source files for package weka.gui.explorer... [javadoc] Loading source files for package weka.gui.graphvisualizer... [javadoc] Loading source files for package weka.gui.hierarchyvisualizer... [javadoc] Loading source files for package weka.gui.sql... [javadoc] Loading source files for package weka.gui.sql.event... [javadoc] Loading source files for package weka.gui.streams... [javadoc] Loading source files for package weka.gui.treevisualizer... [javadoc] Loading source files for package weka.gui.visualize... [javadoc] Loading source files for package weka.gui.visualize.plugins... [javadoc] Constructing Javadoc information... [javadoc] Building index for all the packages and classes... [javadoc] Standard Doclet version 21.0.5+11-Debian-1 [javadoc] Building tree for all the packages and classes... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/associations/AbstractAssociator.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/clusterers/AbstractClusterer.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/AbstractDataSink.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/AbstractDataSinkBeanInfo.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/AbstractDataSource.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/AbstractDataSourceBeanInfo.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/clusterers/AbstractDensityBasedClusterer.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/AbstractEvaluator.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/converters/AbstractFileLoader.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/converters/AbstractFileSaver.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/converters/AbstractLoader.html... [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/core/converters/Loader.java:118: warning: invalid input: '&' [javadoc] * && model_structureDetermined == false [javadoc] ^ [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/core/converters/Loader.java:118: warning: invalid input: '&' [javadoc] * && model_structureDetermined == false [javadoc] ^ [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/core/converters/Loader.java:119: warning: invalid input: '&' [javadoc] * && (* successful parse *); [javadoc] ^ [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/core/converters/Loader.java:119: warning: invalid input: '&' [javadoc] * && (* successful parse *); [javadoc] ^ [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/core/converters/Loader.java:122: warning: invalid input: '&' [javadoc] * && \result.numInstances() == 0 [javadoc] ^ [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/core/converters/Loader.java:122: warning: invalid input: '&' [javadoc] * && \result.numInstances() == 0 [javadoc] ^ [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/core/converters/Loader.java:123: warning: invalid input: '&' [javadoc] * && model_structureDetermined == true; [javadoc] ^ [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/core/converters/Loader.java:123: warning: invalid input: '&' [javadoc] * && model_structureDetermined == true; [javadoc] ^ [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/core/converters/Loader.java:146: warning: invalid input: '&' [javadoc] * && (* successful parse *); [javadoc] ^ [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/core/converters/Loader.java:146: warning: invalid input: '&' [javadoc] * && (* successful parse *); [javadoc] ^ [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/core/converters/Loader.java:149: warning: invalid input: '&' [javadoc] * && \result.numInstances() >= 0 [javadoc] ^ [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/core/converters/Loader.java:149: warning: invalid input: '&' [javadoc] * && \result.numInstances() >= 0 [javadoc] ^ [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/core/converters/Loader.java:150: warning: invalid input: '&' [javadoc] * && model_structureDetermined == true; [javadoc] ^ [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/core/converters/Loader.java:150: warning: invalid input: '&' [javadoc] * && model_structureDetermined == true; [javadoc] ^ [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/converters/AbstractSaver.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/AbstractStringDistanceFunction.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/AbstractTestSetProducer.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/AbstractTestSetProducerBeanInfo.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/filters/unsupervised/attribute/AbstractTimeSeries.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/AbstractTrainAndTestSetProducer.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/AbstractTrainAndTestSetProducerBeanInfo.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/AbstractTrainingSetProducer.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/AbstractTrainingSetProducerBeanInfo.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/meta/AdaBoostM1.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/filters/unsupervised/attribute/Add.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/filters/supervised/attribute/AddClassification.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/filters/unsupervised/attribute/AddCluster.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/filters/unsupervised/attribute/AddExpression.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/filters/unsupervised/attribute/AddID.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/AdditionalMeasureProducer.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/meta/AdditiveRegression.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/filters/unsupervised/attribute/AddNoise.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/filters/unsupervised/attribute/AddValues.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/bayes/net/ADNode.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/trees/ADTree.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/datagenerators/classifiers/classification/Agrawal.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/experiment/AlgorithmListPanel.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/experiment/AlgorithmListPanel.ObjectCellRenderer.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/AlgVector.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/filters/AllFilter.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/AllJavadoc.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/tokenizers/AlphabeticTokenizer.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/bayes/AODE.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/bayes/AODEsr.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/associations/Apriori.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/associations/AprioriItemSet.html... [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/associations/AprioriItemSet.java:94: warning: invalid input: '&' [javadoc] * prob(premise & consequence) - (prob(premise) * prob(consequence)) [javadoc] ^ [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/associations/AprioriItemSet.java:116: warning: invalid input: '&' [javadoc] * prob(premise) * prob(!consequence) / prob(premise & !consequence) [javadoc] ^ [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/converters/ArffLoader.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/converters/ArffLoader.ArffReader.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/arffviewer/ArffPanel.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/converters/ArffSaver.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/arffviewer/ArffSortedTableModel.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/arffviewer/ArffTable.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/arffviewer/ArffTableCellRenderer.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/arffviewer/ArffTableModel.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/arffviewer/ArffViewer.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/arffviewer/ArffViewerMainPanel.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/attributeSelection/ASEvaluation.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/attributeSelection/ASSearch.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/explorer/AssociationsPanel.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/associations/Associator.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/Associator.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/AssociatorBeanInfo.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/AssociatorCustomizer.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/associations/AssociatorEvaluation.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/Attribute.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/attributeSelection/AttributeEvaluator.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/AttributeExpression.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/AttributeListPanel.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/AttributeLocator.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/visualize/AttributePanel.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/visualize/AttributePanelEvent.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/visualize/AttributePanelListener.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/meta/AttributeSelectedClassifier.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/attributeSelection/AttributeSelection.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/filters/supervised/attribute/AttributeSelection.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/AttributeSelectionPanel.html... [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/gui/AttributeSelectionPanel.java:316: warning: @param argument "patter" is not a parameter name. [javadoc] * @param patter true if the pattern button is to be shown [javadoc] ^ [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/explorer/AttributeSelectionPanel.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/attributeSelection/AttributeSetEvaluator.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/AttributeStats.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/AttributeSummarizer.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/AttributeSummarizerBeanInfo.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/AttributeSummaryPanel.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/attributeSelection/AttributeTransformer.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/associations/tertius/AttributeValueLiteral.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/AttributeVisualizationPanel.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/experiment/AveragingResultProducer.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/meta/Bagging.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/neighboursearch/balltrees/BallNode.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/neighboursearch/balltrees/BallSplitter.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/neighboursearch/BallTree.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/neighboursearch/balltrees/BallTreeConstructor.html... [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/core/neighboursearch/balltrees/BallTreeConstructor.java:127: warning: invalid input: '<' [javadoc] * @throws Exception If the num is < 1. [javadoc] ^ [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/core/neighboursearch/balltrees/BallTreeConstructor.java:168: warning: invalid input: '<' [javadoc] * @throws Exception If radius is < 0.0. [javadoc] ^ [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/BatchClassifierEvent.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/BatchClassifierListener.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/BatchClustererEvent.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/BatchClustererListener.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/converters/BatchConverter.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/bayes/BayesianLogisticRegression.html... [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/classifiers/bayes/BayesianLogisticRegression.java:498: warning: invalid input: '<' [javadoc] * @return double +1 if r>0, -1 if r<0 [javadoc] ^ [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/bayes/BayesNet.html... [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/classifiers/bayes/BayesNet.java:989: warning: invalid input: '<' [javadoc] * @param iParent index of the parent set, 0 <= iParent <= getParentCardinality(iNode) [javadoc] ^ [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/classifiers/bayes/BayesNet.java:989: warning: invalid input: '<' [javadoc] * @param iParent index of the parent set, 0 <= iParent <= getParentCardinality(iNode) [javadoc] ^ [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/classifiers/bayes/BayesNet.java:990: warning: invalid input: '<' [javadoc] * @param iValue index of the value, 0 <= iValue <= getCardinality(iNode) [javadoc] ^ [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/classifiers/bayes/BayesNet.java:990: warning: invalid input: '<' [javadoc] * @param iValue index of the value, 0 <= iValue <= getCardinality(iNode) [javadoc] ^ [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/datagenerators/classifiers/classification/BayesNet.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/bayes/net/estimate/BayesNetEstimator.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/bayes/net/BayesNetGenerator.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/BeanCommon.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/BeanConnection.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/BeanInstance.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/BeanVisual.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/attributeSelection/BestFirst.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/attributeSelection/BestFirst.Link2.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/attributeSelection/BestFirst.LinkedList2.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/trees/BFTree.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/graphvisualizer/BIFFormatException.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/graphvisualizer/BIFParser.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/bayes/net/BIFReader.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/BinarySparseInstance.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/trees/j48/BinC45ModelSelection.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/trees/j48/BinC45Split.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/datagenerators/clusterers/BIRCHCluster.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/bayes/net/estimate/BMAEstimator.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/visualize/BMPWriter.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/associations/tertius/Body.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/neighboursearch/balltrees/BottomUpConstructor.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/boundaryvisualizer/BoundaryPanel.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/boundaryvisualizer/BoundaryPanelDistributed.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/boundaryvisualizer/BoundaryVisualizer.html... [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/gui/boundaryvisualizer/BoundaryVisualizer.java:1067: warning: invalid input: '<' [javadoc] * 1 - ERROR - Kernel bandwidth < 0
[javadoc] ^ [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/BrowserHelper.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/pmml/BuiltInArithmetic.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/pmml/BuiltInMath.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/pmml/BuiltInString.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/BVDecompose.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/BVDecomposeSegCVSub.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/converters/C45Loader.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/trees/j48/C45ModelSelection.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/trees/j48/C45PruneableClassifierTree.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/trees/j48/C45PruneableClassifierTreeG.html... [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/classifiers/trees/j48/C45PruneableClassifierTreeG.java:160: warning: @param argument "datathe" is not a parameter name. [javadoc] * @param datathe data for building the tree [javadoc] ^ [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/classifiers/trees/j48/C45PruneableClassifierTreeG.java:1156: warning: @param argument "double" is not a parameter name. [javadoc] * @param double x, double n, double r. [javadoc] ^ [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/rules/part/C45PruneableDecList.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/converters/C45Saver.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/trees/j48/C45Split.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/functions/supportVector/CachedKernel.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/Capabilities.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/Capabilities.Capability.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/CapabilitiesHandler.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/associations/CaRuleGeneration.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/associations/CARuleMiner.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/filters/unsupervised/attribute/Center.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/attributeSelection/CfsSubsetEval.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/filters/unsupervised/attribute/ChangeDateFormat.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/tokenizers/CharacterDelimitedTokenizer.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/ChartEvent.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/ChartListener.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/ChebyshevDistance.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/Check.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/associations/CheckAssociator.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/attributeSelection/CheckAttributeSelection.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/CheckBoxList.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/CheckBoxList.CheckBoxListModel.html... [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/gui/CheckBoxList.java:239: warning: cannot find exception type by name [javadoc] * @throws NoSuchElementException [javadoc] ^ [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/gui/CheckBoxList.java:315: warning: cannot find exception type by name [javadoc] * @throws NoSuchElementException [javadoc] ^ [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/CheckBoxList.CheckBoxListRenderer.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/CheckClassifier.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/clusterers/CheckClusterer.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/estimators/CheckEstimator.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/estimators/CheckEstimator.AttrTypes.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/estimators/CheckEstimator.EstTypes.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/estimators/CheckEstimator.PostProcessor.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/CheckGOE.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/functions/supportVector/CheckKernel.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/CheckOptionHandler.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/CheckScheme.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/CheckScheme.PostProcessor.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/CheckSource.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/filters/CheckSource.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/functions/pace/ChisqMixture.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/attributeSelection/ChiSquaredAttributeEval.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/matrix/CholeskyDecomposition.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/bayes/net/search/ci/CISearchAlgorithm.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/mi/CitationKNN.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/filters/unsupervised/attribute/ClassAssigner.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/ClassAssigner.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/ClassAssignerBeanInfo.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/ClassAssignerCustomizer.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/meta/nestedDichotomies/ClassBalancedND.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/ClassDiscovery.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/ClassDiscovery.StringCompare.html... [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/core/ClassDiscovery.java:701: warning: invalid input: '&' [javadoc] * @return -1 if o1<o2, 0 if o1=o2 and 1 if o1&;gt;o2 [javadoc] ^ [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/datagenerators/ClassificationGenerator.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/meta/ClassificationViaClustering.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/meta/ClassificationViaRegression.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/Classifier.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/Classifier.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/ClassifierBeanInfo.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/ClassifierCustomizer.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/rules/part/ClassifierDecList.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/explorer/ClassifierPanel.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/ClassifierPerformanceEvaluator.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/ClassifierPerformanceEvaluatorBeanInfo.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/experiment/ClassifierSplitEvaluator.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/trees/j48/ClassifierSplitModel.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/attributeSelection/ClassifierSubsetEval.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/trees/j48/ClassifierTree.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/ClassloaderUtil.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/filters/supervised/attribute/ClassOrder.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/visualize/ClassPanel.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/ClassValuePicker.html... [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/gui/beans/ClassValuePicker.java:139: warning: @param argument "index" is not a parameter name. [javadoc] * @param index the class value index to use [javadoc] ^ [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/ClassValuePickerBeanInfo.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/ClassValuePickerCustomizer.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/clusterers/CLOPE.html... [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/clusterers/CLOPE.java:414: warning: @param argument "instances" is not a parameter name. [javadoc] * @param instances The instances that need to be clustered [javadoc] ^ [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/datagenerators/ClusterDefinition.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/clusterers/Clusterer.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/Clusterer.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/ClustererBeanInfo.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/ClustererCustomizer.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/explorer/ClustererPanel.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/ClustererPerformanceEvaluator.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/ClustererPerformanceEvaluatorBeanInfo.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/clusterers/ClusterEvaluation.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/datagenerators/ClusterGenerator.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/filters/unsupervised/attribute/ClusterMembership.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/clusterers/Cobweb.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/treevisualizer/Colors.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/bayes/ComplementNaiveBayes.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/ComponentHelper.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/experiment/Compute.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/estimators/ConditionalEstimator.html... [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/estimators/ConditionalEstimator.java:36: warning: invalid input: '<' [javadoc] * for(int i = 0; i < 50; i++) { [javadoc] ^ [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/estimators/ConditionalEstimator.java:49: warning: invalid input: '<' [javadoc] * for(int i = 0; i <= 100; i+= 5) { [javadoc] ^ [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/evaluation/ConfusionMatrix.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/rules/ConjunctiveRule.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/sql/event/ConnectionEvent.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/sql/event/ConnectionListener.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/ConnectionNotificationConsumer.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/sql/ConnectionPanel.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/attributeSelection/ConsistencySubsetEval.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/attributeSelection/ConsistencySubsetEval.hashKey.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/logging/ConsoleLogger.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/pmml/Constant.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/ContingencyTables.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/ConverterFileChooser.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/converters/ConverterUtils.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/converters/ConverterUtils.DataSink.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/converters/ConverterUtils.DataSource.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/filters/unsupervised/attribute/Copy.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/Copyable.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/Copyright.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/trees/m5/CorrelationSplitInfo.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/CostBenefitAnalysis.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/CostBenefitAnalysisBeanInfo.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/evaluation/CostCurve.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/CostMatrix.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/CostMatrixEditor.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/attributeSelection/CostSensitiveASEvaluation.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/attributeSelection/CostSensitiveAttributeEval.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/meta/CostSensitiveClassifier.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/experiment/CostSensitiveClassifierSplitEvaluator.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/attributeSelection/CostSensitiveSubsetEval.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/neighboursearch/CoverTree.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/neighboursearch/CoverTree.CoverTreeNode.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/CrossValidationFoldMaker.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/CrossValidationFoldMakerBeanInfo.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/CrossValidationFoldMakerCustomizer.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/experiment/CrossValidationResultProducer.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/converters/CSVLoader.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/experiment/CSVResultListener.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/converters/CSVSaver.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/CustomizerCloseRequester.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/CustomizerClosingListener.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/CustomPanelSupplier.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/meta/CVParameterSelection.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/meta/Dagging.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/clusterers/forOPTICSAndDBScan/Databases/Database.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/converters/DatabaseConnection.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/DatabaseConnectionDialog.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/converters/DatabaseConverter.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/converters/DatabaseLoader.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/experiment/DatabaseResultListener.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/experiment/DatabaseResultProducer.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/converters/DatabaseSaver.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/experiment/DatabaseUtils.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/DataFormatListener.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/datagenerators/DataGenerator.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/boundaryvisualizer/DataGenerator.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/explorer/DataGeneratorPanel.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/meta/nestedDichotomies/DataNearBalancedND.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/clusterers/forOPTICSAndDBScan/DataObjects/DataObject.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/DataSetEvent.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/experiment/DatasetListPanel.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/DataSink.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/DataSource.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/DataSourceListener.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/DataVisualizer.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/DataVisualizerBeanInfo.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/clusterers/DBSCAN.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/sql/DbUtils.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/estimators/DDConditionalEstimator.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/Debug.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/Debug.Clock.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/Debug.DBO.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/Debug.Log.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/Debug.Random.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/Debug.SimpleLog.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/Debug.Timestamp.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/trees/DecisionStump.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/rules/DecisionTable.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/rules/DecisionTableHashKey.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/meta/Decorate.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/pmml/DefineFunction.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/clusterers/DensityBasedClusterer.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/experiment/DensityBasedClustererSplitEvaluator.html... [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/experiment/DensityBasedClustererSplitEvaluator.java:266: warning: @param argument "measureName" is not a parameter name. [javadoc] * @param measureName the name of the measure to query for its value [javadoc] ^ [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/experiment/DensityBasedClustererSplitEvaluator.java:550: warning: @param argument "newClassifier" is not a parameter name. [javadoc] * @param newClassifier the new clusterer to use. [javadoc] ^ [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/experiment/DensityBasedClustererSplitEvaluator.java:579: warning: @param argument "newClusterer" is not a parameter name. [javadoc] * @param newClusterer the Classifier class name. [javadoc] ^ [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/pmml/DerivedFieldMetaInfo.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/estimators/DiscreteEstimator.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/bayes/net/estimate/DiscreteEstimatorBayes.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/bayes/net/estimate/DiscreteEstimatorFullBayes.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/functions/pace/DiscreteFunction.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/pmml/Discretize.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/filters/supervised/attribute/Discretize.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/filters/unsupervised/attribute/Discretize.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/DistanceFunction.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/experiment/DistributeExperimentPanel.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/trees/j48/Distribution.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/estimators/DKConditionalEstimator.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/bayes/DMNBtext.html... [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/classifiers/bayes/DMNBtext.java:157: warning: @param argument "instances" is not a parameter name. [javadoc] * @param instances set of instances serving as training data [javadoc] ^ [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/bayes/DMNBtext.DNBBinary.html... [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/classifiers/bayes/DMNBtext.java:462: warning: @param argument "instance" is not a parameter name. [javadoc] * @param instance the instance to be classified [javadoc] ^ [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/estimators/DNConditionalEstimator.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/graphvisualizer/DotParser.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/matrix/DoubleVector.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/Drawable.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/rules/DTNB.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/treevisualizer/Edge.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/bayes/net/EditableBayesNet.html... [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/classifiers/bayes/net/EditableBayesNet.java:1137: warning: @param argument "iNode" is not a parameter name. [javadoc] * @param iNode index of node to set position for [javadoc] ^ [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/classifiers/bayes/net/EditableBayesNet.java:1447: warning: @param argument "iNode" is not a parameter name. [javadoc] * @param iNode index of node of interest [javadoc] ^ [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/EditDistance.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/matrix/EigenvalueDecomposition.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/associations/gsp/Element.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/clusterers/EM.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/meta/END.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/trees/j48/EntropyBasedSplitCrit.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/trees/j48/EntropySplitCrit.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/Environment.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/EnvironmentHandler.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/clusterers/forOPTICSAndDBScan/Utils/EpsilonRange_ListElement.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/attributeSelection/ErrorBasedMeritEvaluator.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/visualize/plugins/ErrorVisualizePlugin.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/estimators/Estimator.html... [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/estimators/Estimator.java:66: warning: invalid input: '<' [javadoc] * for(int i = 0; i < 50; i++) { [javadoc] ^ [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/estimators/EstimatorUtils.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/clusterers/forOPTICSAndDBScan/DataObjects/EuclideanDataObject.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/EuclideanDistance.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/Evaluation.html... [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/classifiers/Evaluation.java:2076: warning: invalid input: '&' [javadoc] * Return the total Kononenko & Bratko Information score in bits [javadoc] ^ [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/classifiers/Evaluation.java:2095: warning: invalid input: '&' [javadoc] * Return the Kononenko & Bratko Information score in bits per instance. [javadoc] ^ [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/classifiers/Evaluation.java:2114: warning: invalid input: '&' [javadoc] * Return the Kononenko & Bratko Relative Information score [javadoc] ^ [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/classifiers/Evaluation.java:462: warning: @param argument "forPredictionsString" is not a parameter name. [javadoc] * @param forPredictionsString varargs parameter that, if supplied, is [javadoc] ^ [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/classifiers/Evaluation.java:1455: warning: @param argument "forPredictionsString" is not a parameter name. [javadoc] * @param forPredictionsString varargs parameter that, if supplied, is [javadoc] ^ [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/classifiers/Evaluation.java:2076: warning: invalid input: '&' [javadoc] * Return the total Kononenko & Bratko Information score in bits [javadoc] ^ [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/classifiers/Evaluation.java:2078: warning: invalid input: '&B' [javadoc] * @return the K&B information score [javadoc] ^ [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/classifiers/Evaluation.java:2095: warning: invalid input: '&' [javadoc] * Return the Kononenko & Bratko Information score in bits per instance. [javadoc] ^ [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/classifiers/Evaluation.java:2097: warning: invalid input: '&B' [javadoc] * @return the K&B information score [javadoc] ^ [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/classifiers/Evaluation.java:2114: warning: invalid input: '&' [javadoc] * Return the Kononenko & Bratko Relative Information score [javadoc] ^ [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/classifiers/Evaluation.java:2116: warning: invalid input: '&B' [javadoc] * @return the K&B relative information score [javadoc] ^ [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/classifiers/Evaluation.java:3148: warning: @return tag cannot be used in method with void return type. [javadoc] public static void printClassifications(Classifier classifier, [javadoc] ^ [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/evaluation/EvaluationUtils.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/EventConstraints.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/attributeSelection/ExhaustiveSearch.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/experiment/Experiment.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/experiment/Experimenter.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/experiment/ExperimenterDefaults.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/explorer/Explorer.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/explorer/Explorer.CapabilitiesFilterChangeEvent.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/explorer/Explorer.CapabilitiesFilterChangeListener.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/explorer/Explorer.ExplorerPanel.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/explorer/Explorer.LogHandler.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/explorer/ExplorerDefaults.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/matrix/ExponentialFormat.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/pmml/Expression.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/datagenerators/classifiers/regression/Expression.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/ExtensionFileFilter.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/clusterers/FarthestFirst.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/FastVector.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/FastVector.FastVectorEnumeration.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/pmml/FieldMetaInfo.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/pmml/FieldMetaInfo.Interval.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/pmml/FieldMetaInfo.Interval.Closure.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/pmml/FieldMetaInfo.Optype.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/pmml/FieldMetaInfo.Value.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/pmml/FieldMetaInfo.Value.Property.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/pmml/FieldRef.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/FileEditor.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/logging/FileLogger.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/converters/FileSourcedConverter.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/filters/Filter.html... [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/filters/Filter.java:65: warning: invalid input: '<' [javadoc] * for (int i = 0; i < data.numInstances(); i++) { [javadoc] ^ [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/Filter.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/FilterBeanInfo.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/FilterCustomizer.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/associations/FilteredAssociator.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/attributeSelection/FilteredAttributeEval.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/meta/FilteredClassifier.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/clusterers/FilteredClusterer.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/attributeSelection/FilteredSubsetEval.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/FindWithCapabilities.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/filters/unsupervised/attribute/FirstOrder.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/matrix/FlexibleDecimalFormat.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/matrix/FloatingPointFormat.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/FlowRunner.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/FlowRunner.SimpleLogger.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/associations/FPGrowth.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/associations/FPGrowth.AssociationRule.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/associations/FPGrowth.AssociationRule.METRIC_TYPE.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/associations/FPGrowth.BinaryItem.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/bayes/net/search/fixed/FromFile.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/trees/FT.html... [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/classifiers/trees/FT.java:537: warning: @param argument "c" is not a parameter name. [javadoc] * @param c Value corresponding to tree type. [javadoc] ^ [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/trees/ft/FTInnerNode.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/trees/ft/FTLeavesNode.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/trees/ft/FTNode.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/trees/ft/FTtree.html... [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/classifiers/trees/ft/FTtree.java:377: warning: @param argument "" is not the name of a type parameter. [javadoc] * @param probsConst [javadoc] ^ [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/pmml/Function.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/attributeSelection/GainRatioAttributeEval.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/trees/j48/GainRatioSplitCrit.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/bayes/blr/GaussianPriorImpl.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/functions/GaussianProcesses.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/associations/GeneralizedSequentialPatterns.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/pmml/consumer/GeneralRegression.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/experiment/GeneratorPropertyIteratorPanel.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/GenericArrayEditor.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/GenericObjectEditor.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/GenericObjectEditor.CapabilitiesFilterDialog.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/GenericObjectEditor.GOEPanel.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/GenericObjectEditor.GOETreeNode.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/GenericObjectEditor.JTreePopupMenu.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/GenericPropertiesCreator.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/attributeSelection/GeneticSearch.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/bayes/net/search/global/GeneticSearch.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/bayes/net/search/local/GeneticSearch.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/GlobalInfoJavadoc.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/bayes/net/search/global/GlobalScoreSearchAlgorithm.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/meta/Grading.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/trees/j48/GraftSplit.html... [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/classifiers/trees/j48/GraftSplit.java:77: warning: invalid input: '<' [javadoc] * @param t the test type (0 is <=, 1 is >, 2 is =, 3 is !) [javadoc] ^ [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/classifiers/trees/j48/GraftSplit.java:96: warning: invalid input: '<' [javadoc] * @param t the test type (0 is <=, 1 is >, 2 is =, 3 is !=) [javadoc] ^ [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/classifiers/trees/j48/GraftSplit.java:478: warning: invalid input: '<' [javadoc] * @return -1, 0, or 1 if this GraftSplit laplace is <, = or > than that of g [javadoc] ^ [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/graphvisualizer/GraphConstants.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/graphvisualizer/GraphEdge.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/GraphEvent.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/GraphListener.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/graphvisualizer/GraphNode.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/clusterers/forOPTICSAndDBScan/OPTICS_GUI/GraphPanel.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/GraphViewer.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/GraphViewerBeanInfo.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/visualize/plugins/GraphVisualizePlugin.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/graphvisualizer/GraphVisualizer.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/attributeSelection/GreedyStepwise.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/meta/GridSearch.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/bayes/net/GUI.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/GUIChooser.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/GUIChooser.ChildFrameSDI.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/associations/tertius/Head.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/graphvisualizer/HierarchicalBCEngine.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/clusterers/HierarchicalClusterer.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/HierarchyPropertyParser.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/hierarchyvisualizer/HierarchyVisualizer.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/bayes/net/search/global/HillClimber.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/bayes/net/search/local/HillClimber.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/sql/event/HistoryChangedEvent.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/sql/event/HistoryChangedListener.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/bayes/HNB.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/attributeSelection/HoldOutSubsetEvaluator.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/experiment/HostListPanel.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/misc/HyperPipes.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/lazy/IB1.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/lazy/IBk.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/bayes/net/search/ci/ICSSearchAlgorithm.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/trees/Id3.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/trees/m5/Impurity.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/IncrementalClassifierEvaluator.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/IncrementalClassifierEvaluatorBeanInfo.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/IncrementalClassifierEvaluatorCustomizer.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/IncrementalClassifierEvent.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/IncrementalClassifierListener.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/converters/IncrementalConverter.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/estimators/IncrementalEstimator.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/associations/tertius/IndividualInstance.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/associations/tertius/IndividualInstances.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/associations/tertius/IndividualLiteral.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/attributeSelection/InfoGainAttributeEval.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/trees/j48/InfoGainSplitCrit.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/sql/InfoPanel.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/sql/InfoPanelCellRenderer.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/Instance.html... [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/core/Instance.java:558: warning: cannot find exception type by name [javadoc] * @throws UnaddignedDatasetException if the instance doesn't [javadoc] ^ [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/InstanceComparator.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/streams/InstanceCounter.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/InstanceEvent.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/streams/InstanceEvent.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/streams/InstanceJoiner.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/InstanceListener.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/streams/InstanceListener.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/streams/InstanceLoader.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/streams/InstanceProducer.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/experiment/InstanceQuery.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/Instances.html... [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/core/Instances.java:1187: warning: invalid input: '<' [javadoc] * @throws IllegalArgumentException if the class index is too big or < 0 [javadoc] ^ [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/streams/InstanceSavePanel.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/experiment/InstancesResultListener.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/InstancesSummaryPanel.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/InstanceStreamToBatchMaker.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/InstanceStreamToBatchMakerBeanInfo.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/streams/InstanceTable.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/streams/InstanceViewer.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/filters/unsupervised/attribute/InterquartileRange.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/IntervalEstimator.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/matrix/IntVector.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/functions/IsotonicRegression.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/associations/ItemSet.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/stemmers/IteratedLovinsStemmer.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/IteratedSingleClassifierEnhancer.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/IterativeClassifier.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/trees/J48.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/trees/J48graft.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/Javadoc.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/visualize/JComponentWriter.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/JListHelper.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/visualize/JPEGWriter.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/rules/JRip.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/rules/JRip.Antd.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/rules/JRip.NominalAntd.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/rules/JRip.NumericAntd.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/rules/JRip.RipperRule.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/JTableHelper.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/Jython.html... [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/core/Jython.java:84: warning: @param argument "o" is not a parameter name. [javadoc] * @param o the object the method should be called from, [javadoc] ^ [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/core/Jython.java:138: warning: @param argument "filename" is not a parameter name. [javadoc] * @param filename the path to the Jython module, incl. filename [javadoc] ^ [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/core/Jython.java:151: warning: @param argument "filename" is not a parameter name. [javadoc] * @param filename the path to the Jython module, incl. filename [javadoc] ^ [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/JythonObject.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/JythonSerializableObject.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/bayes/net/search/global/K2.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/bayes/net/search/local/K2.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/estimators/KDConditionalEstimator.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/boundaryvisualizer/KDDataGenerator.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/neighboursearch/KDTree.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/neighboursearch/kdtrees/KDTreeNode.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/neighboursearch/kdtrees/KDTreeNodeSplitter.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/functions/supportVector/Kernel.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/estimators/KernelEstimator.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/functions/supportVector/KernelEvaluation.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/filters/unsupervised/attribute/KernelFilter.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/estimators/KKConditionalEstimator.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/neighboursearch/kdtrees/KMeansInpiredMethod.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/KnowledgeFlow.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/beans/KnowledgeFlowApp.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/xml/KOML.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/lazy/KStar.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/lazy/kstar/KStarCache.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/lazy/kstar/KStarCache.CacheTable.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/lazy/kstar/KStarCache.TableEntry.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/lazy/kstar/KStarConstants.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/lazy/kstar/KStarNominalAttribute.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/lazy/kstar/KStarNumericAttribute.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/lazy/kstar/KStarWrapper.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/associations/LabeledItemSet.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/trees/LADTree.html... [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/classifiers/trees/LADTree.java:1319: warning: @param argument "measureName" is not a parameter name. [javadoc] * @param measureName the name of the measure to query for its value [javadoc] ^ [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/bayes/net/search/local/LAGDHillClimber.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/bayes/blr/LaplacePriorImpl.html... [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/classifiers/bayes/blr/LaplacePriorImpl.java:137: warning: @param argument "hyperparameter" is not a parameter name. [javadoc] * @param hyperparameter [javadoc] ^ [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/attributeSelection/LatentSemanticAnalysis.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/graphvisualizer/LayoutCompleteEvent.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/graphvisualizer/LayoutCompleteEventListener.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/graphvisualizer/LayoutEngine.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/lazy/LBR.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/lazy/LBR.Indexes.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/experiment/LearningRateResultProducer.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/functions/LeastMedSq.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/datagenerators/classifiers/classification/LED24.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/gui/visualize/LegendPanel.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/attributeSelection/LFSMethods.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/attributeSelection/LFSMethods.Link2.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/attributeSelection/LFSMethods.LinkedList2.html... [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/attributeSelection/LFSMethods.java:658: warning: @param argument "gr" is not a parameter name. [javadoc] * @param gr [javadoc] ^ [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/functions/LibLINEAR.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/functions/LibSVM.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/converters/LibSVMLoader.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/converters/LibSVMSaver.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/attributeSelection/LinearForwardSelection.html... [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/attributeSelection/LinearForwardSelection.java:257: warning: invalid input: '<' [javadoc] * -D <0 = forward selection | 1 = floating forward selection>
[javadoc] ^ [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/attributeSelection/LinearForwardSelection.java:274: warning: invalid input: '<' [javadoc] * -T <0 = fixed-set | 1 = fixed-width>
[javadoc] ^ [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/attributeSelection/LinearForwardSelection.java:594: warning: @param argument "d" is not a parameter name. [javadoc] * @param d [javadoc] ^ [javadoc] /build/reproducible-path/weka-3.6.14/src/main/java/weka/attributeSelection/LinearForwardSelection.java:737: warning: @param argument "ASEvaluator" is not a parameter name. [javadoc] * @param ASEvaluator [javadoc] ^ [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/neighboursearch/LinearNNSearch.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/functions/LinearRegression.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/matrix/LinearRegression.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/classifiers/functions/neural/LinearUnit.html... [javadoc] Generating /build/reproducible-path/weka-3.6.14/doc/weka/core/ListOptions.html... 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(./commandline.tex [7] Overfull \hbox (9.08328pt too wide) in paragraph at lines 46--46 [] \OT1/cmtt/m/n/7 % Any relation to real weather is purely coincidental.[] Overfull \hbox (20.43309pt too wide) in paragraph at lines 39--54 [] Overfull \hbox (20.43309pt too wide) in paragraph at lines 56--70 [] Overfull \hbox (20.43309pt too wide) in paragraph at lines 72--87 [] Overfull \hbox (20.43309pt too wide) in paragraph at lines 89--104 [] Overfull \hbox (20.43309pt too wide) in paragraph at lines 106--120 [] Overfull \hbox (20.43309pt too wide) in paragraph at lines 122--141 [] Underfull \vbox (badness 1616) has occurred while \output is active [8] Overfull \hbox (16.8051pt too wide) in paragraph at lines 155--156 \OT1/cmtt/m/n/10 converters.CSVLoader\OT1/cmr/m/n/10 , which can be used to im- port C45 datasets and comma/tab- [9] Overfull \hbox (63.24817pt too wide) in paragraph at lines 166--167 \OT1/cmr/m/n/10 Any learn-ing al-go-rithm in WEKA is de-rived from the ab-strac t \OT1/cmtt/m/n/10 weka.classifiers.Classifier [10] [11] [12] Overfull \hbox (2.46945pt too wide) in paragraph at lines 375--376 []\OT1/cmtt/m/n/10 meta.ClassificationViaRegression -W functions.LinearRegressi on LaTeX Warning: Citation `platt98' on page 13 undefined on input line 377. [13] Overfull \hbox (20.43309pt too wide) in paragraph at lines 391--418 [] Overfull \hbox (1.64569pt too wide) in paragraph at lines 427--427 [] \OT1/cmtt/m/n/7 Time taken to test model on training data: 0 seconds[] Overfull \hbox (20.43309pt too wide) in paragraph at lines 420--435 [] Overfull \hbox (5.36449pt too wide) in paragraph at lines 464--464 [] \OT1/cmtt/m/n/7 TP Rate FP Rate Precision Recall F-Measure Class[] Overfull \hbox (20.43309pt too wide) in paragraph at lines 437--472 [] Underfull \vbox (badness 10000) has occurred while \output is active [14] Overfull \hbox (1.64569pt too wide) in paragraph at lines 503--503 [] \OT1/cmtt/m/n/7 Correctly Classified Instances 9 64.2857 %[] Overfull \hbox (1.64569pt too wide) in paragraph at lines 503--503 [] \OT1/cmtt/m/n/7 Incorrectly Classified Instances 5 35.7143 %[] Overfull \hbox (5.36449pt too wide) in paragraph at lines 503--503 [] \OT1/cmtt/m/n/7 TP Rate FP Rate Precision Recall F-Measure Class[] Overfull \hbox (20.43309pt too wide) in paragraph at lines 474--511 [] [15] Overfull \hbox (0.61818pt too wide) in paragraph at lines 522--523 []\OT1/cmr/m/n/10 The \OT1/cmr/m/it/10 F-Measure \OT1/cmr/m/n/10 is sim-ply 2*P re-ci-sion*Recall/(Precision+Recall), a com-bined Overfull \hbox (17.81848pt too wide) in paragraph at lines 547--547 [] \OT1/cmtt/m/n/7 0 diaporthe-stem-canker 0.9999672587892333 diaporthe-stem-c anker[] Overfull \hbox (17.81848pt too wide) in paragraph at lines 547--547 [] \OT1/cmtt/m/n/7 1 diaporthe-stem-canker 0.9999992614503429 diaporthe-stem-c anker[] Overfull \hbox (14.09969pt too wide) in paragraph at lines 547--547 [] \OT1/cmtt/m/n/7 2 diaporthe-stem-canker 0.999998948559035 diaporthe-stem-ca nker[] Overfull \hbox (17.81848pt too wide) in paragraph at lines 547--547 [] \OT1/cmtt/m/n/7 3 diaporthe-stem-canker 0.9999998441238833 diaporthe-stem-c anker[] Overfull \hbox (17.81848pt too wide) in paragraph at lines 547--547 [] \OT1/cmtt/m/n/7 4 diaporthe-stem-canker 0.9999989997681132 diaporthe-stem-c anker[] Overfull \hbox (10.38089pt too wide) in paragraph at lines 547--547 [] \OT1/cmtt/m/n/7 5 rhizoctonia-root-rot 0.9999999395928124 rhizoctonia-root- rot[] Overfull \hbox (6.6621pt too wide) in paragraph at lines 547--547 [] \OT1/cmtt/m/n/7 6 rhizoctonia-root-rot 0.999998912860593 rhizoctonia-root-r ot[] Overfull \hbox (10.38089pt too wide) in paragraph at lines 547--547 [] \OT1/cmtt/m/n/7 7 rhizoctonia-root-rot 0.9999994386283236 rhizoctonia-root- rot[] Underfull \hbox (badness 1953) in paragraph at lines 551--552 \OT1/cmr/m/n/10 dicted class value, the con-fi- Overfull \hbox (48.88585pt too wide) in paragraph at lines 533--555 [] Overfull \hbox (48.88585pt too wide) in paragraph at lines 557--580 [] Overfull \hbox (26.73993pt too wide) in paragraph at lines 592--593 \OT1/cmr/m/n/10 Dividing by the num-ber of in-stances in the test set, i.e. \OT 1/cmtt/m/n/10 wc -l < soybean-test.preds [16] (./includes/learning_curves.tex Overfull \hbox (67.78633pt too wide) in paragraph at lines 21--21 [] \OT1/cmtt/m/n/7 java weka.filters.supervised.instance.StratifiedRemoveFol ds -N 4 -F 1 -S $run -c last -i ../$f -o $run/t_$f[] Overfull \hbox (78.94272pt too wide) in paragraph at lines 21--21 [] \OT1/cmtt/m/n/7 java weka.filters.supervised.instance.StratifiedRemoveFol ds -N 4 -F 1 -S $run -V -c last -i ../$f -o $run/t0$f[] Overfull \hbox (38.03596pt too wide) in paragraph at lines 21--21 [] \OT1/cmtt/m/n/7 java weka.filters.supervised.instance.Resample -S 0 -Z 83 -c last -i $run/t$nr$f -o $run/t$nrp1$f[] [17]) Overfull \hbox (82.66151pt too wide) in paragraph at lines 663--663 [] \OT1/cmtt/m/n/7 -M "weka.classifiers.meta.ClassificationViaRegression -W weka.classifiers.functions.LinearRegression -- -S 1" \[] ) [18] [19] [20] Chapter 2. 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[51] [52] [53] Underfull \vbox (badness 10000) has occurred while \output is active [54] [55] [56] Underfull \vbox (badness 7704) has occurred while \output is active [57] [58] [59] Underfull \vbox (badness 10000) has occurred while \output is active [60] Overfull \hbox (74.99634pt too wide) in paragraph at lines 409--409 [] \OT1/cmtt/m/n/10 @attribute Key_Scheme {weka.classifiers.rules.ZeroR,weka.cl assifiers.trees.J48}[] Overfull \hbox (38.24666pt too wide) in paragraph at lines 409--409 [] \OT1/cmtt/m/n/10 @attribute Key_Scheme_version_ID {48055541465867954,-217733 168393644444}[] [61] Overfull \hbox (1.49698pt too wide) in paragraph at lines 409--409 [] \OT1/cmtt/m/n/10 @attribute Summary {'Number of leaves: 3\nSize of the tree: 5\n',[] Overfull \hbox (48.74657pt too wide) in paragraph at lines 409--409 [] \OT1/cmtt/m/n/10 iris,1,weka.classifiers.rules.ZeroR,,48055541465867954,2005 1221.033,99,51,[] Overfull \hbox (69.74638pt too wide) in paragraph at lines 409--409 [] \OT1/cmtt/m/n/10 17,34,0,33.333333,66.666667,0,0,0.444444,0.471405,100,100,8 0.833088,80.833088,[] Overfull \hbox (59.24648pt too wide) in paragraph at lines 409--409 [] \OT1/cmtt/m/n/10 0,1.584963,1.584963,0,0,0,0,1,17,1,34,0,0,0,0,0.333333,1,0. 5,0.5,0,0,?,?,?,?[] [62] [63] Underfull \vbox (badness 10000) has occurred while \output is active [64] Underfull \vbox (badness 10000) has occurred while \output is active [65] [66] [67] Overfull \hbox (38.24666pt too wide) in paragraph at lines 536--536 []\OT1/cmtt/m/n/10 ClassifierSplitEvaluator: weka.classifiers.trees.J48 -C 0.25 -M 2(version[] Overfull \hbox (1.49698pt too wide) in paragraph at lines 536--536 []\OT1/cmtt/m/n/10 Correctly Classified Instances 47 92. 1569 %[] Overfull \hbox (1.49698pt too wide) in paragraph at lines 536--536 []\OT1/cmtt/m/n/10 Incorrectly Classified Instances 4 7. 8431 %[] [68] [69] [70] Overfull \hbox (0.2135pt too wide) in paragraph at lines 584--585 []\OT1/cmr/m/n/10 As with the other Re-sult-Pro-duc-ers, ad-di-tional schemes c an be de-fined. 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Plu-g-ins are in-stalled in a di-rec-tory called [ ][]\OT1/cmtt/m/n/10 .knowledgeFlow/plugins Overfull \hbox (69.74638pt too wide) in paragraph at lines 475--475 []\OT1/cmtt/m/n/10 cygnus:~ mhall$ jar tvf /Users/mhall/.knowledgeFlow/plugins/ kettle/kettleKF.jar[] Overfull \hbox (38.24666pt too wide) in paragraph at lines 475--475 [] \OT1/cmtt/m/n/10 2812 Wed Feb 20 14:01:20 NZDT 2008 weka/gui/beans/icons/Ke ttleInput.gif[] Overfull \hbox (85.49625pt too wide) in paragraph at lines 475--475 [] \OT1/cmtt/m/n/10 2812 Wed Feb 20 14:01:18 NZDT 2008 weka/gui/beans/icons/Ke ttleInput_animated.gif[] Overfull \hbox (17.24684pt too wide) in paragraph at lines 475--475 [] \OT1/cmtt/m/n/10 1839 Wed Feb 20 13:59:08 NZDT 2008 weka/gui/beans/KettleIn put.class[] Overfull \hbox (59.24648pt too wide) in paragraph at lines 475--475 [] \OT1/cmtt/m/n/10 174 Tue Feb 19 15:27:24 NZDT 2008 weka/gui/beans/KettleIn putBeanInfo.class[] Overfull \hbox (48.74657pt too wide) in paragraph at lines 475--475 []\OT1/cmtt/m/n/10 cygnus:~ mhall$ more /Users/mhall/.knowledgeFlow/plugins/ket tle/Beans.props[] ) [101] [102] Chapter 7. (./arffviewer.tex [103] [104] [105] [106] ) [107] [108] Chapter 8. (./bayesnet.tex [109] LaTeX Warning: Reference `eq.infer' on page 110 undefined on input line 93. [110] Underfull \vbox (badness 2103) has occurred while \output is active [111] LaTeX Warning: Reference `sec.estimate' on page 112 undefined on input line 178 . LaTeX Warning: Citation `Moore' on page 112 undefined on input line 181. Overfull \hbox (1.83237pt too wide) in paragraph at lines 180--185 \OT1/cmr/m/n/10 ent from the ADTree clas-si-fier al-go-rithm from \OT1/cmtt/m/n /10 weka.classifiers.tree.ADTree\OT1/cmr/m/n/10 . [112] [113] LaTeX Warning: Citation `bouck1995' on page 114 undefined on input line 252. LaTeX Warning: Citation `CooperHerskovits1992' on page 114 undefined on input l ine 281. LaTeX Warning: Citation `heckerman95' on page 114 undefined on input line 287. LaTeX Warning: Citation `CooperHerskovits1992' on page 114 undefined on input l ine 294. 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CONDITIONAL INDEPENDENCE TEST BASED STRUCTURE LEARNING \ OT1/cmr/m/n/10 117 [117] LaTeX Warning: Citation `verma' on page 118 undefined on input line 409. Overfull \hbox (106.49606pt too wide) in paragraph at lines 426--426 [] \OT1/cmtt/m/n/10 Rule 5: if no edges are directed then take a rand om one (first we can find)[] Underfull \hbox (badness 10000) in paragraph at lines 434--442 [118] LaTeX Warning: Reference `sec.score' on page 119 undefined on input line 451. Underfull \vbox (badness 1867) has occurred while \output is active [119] LaTeX Warning: Reference `sec.score' on page 120 undefined on input line 481. [120] LaTeX Warning: Citation `bouck1995' on page 121 undefined on input line 516. [121] Overfull \hbox (28.27066pt too wide) in paragraph at lines 597--597 [] \OT1/cmtt/m/n/9 Sets test file. If missing, a cross-validation will b e performed on the[] [122] Overfull \hbox (14.09583pt too wide) in paragraph at lines 597--597 [] \OT1/cmtt/m/n/9 Retrieves the options from the XML-data instead of th e command line.[] [123] Overfull \hbox (57.99673pt too wide) in paragraph at lines 644--644 [] \OT1/cmtt/m/n/10 Use tournament selection (true) or maximum subpopul atin (false).[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 644--644 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 644--644 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 644--644 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 661--661 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 661--661 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 661--661 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 678--678 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 678--678 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 678--678 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] [124] Overfull \hbox (42.24687pt too wide) in paragraph at lines 699--699 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 699--699 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 699--699 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 720--720 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 720--720 [] \OT1/cmtt/m/n/10 after a network structure is learned. 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This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 764--764 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 774--774 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 774--774 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 774--774 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] [126] Overfull \hbox (42.24687pt too wide) in paragraph at lines 784--784 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 784--784 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 784--784 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 799--799 [] \OT1/cmtt/m/n/10 When determining whether an edge exists a search is performed[] Overfull \hbox (52.74678pt too wide) in paragraph at lines 799--799 [] \OT1/cmtt/m/n/10 for a set Z that separates the nodes. MaxCardinalit y determines[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 799--799 [] \OT1/cmtt/m/n/10 the maximum size of the set Z. This greatly influen ces the[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 799--799 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 799--799 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 799--799 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] Overfull \hbox (57.99673pt too wide) in paragraph at lines 829--829 [] \OT1/cmtt/m/n/10 Use tournament selection (true) or maximum subpopul atin (false).[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 829--829 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] [127] Overfull \hbox (31.74696pt too wide) in paragraph at lines 829--829 [] \OT1/cmtt/m/n/10 after a network structure is learned. 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This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 914--914 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] [129] Overfull \hbox (42.24687pt too wide) in paragraph at lines 943--943 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 943--943 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 943--943 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 956--956 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 956--956 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 956--956 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] Overfull \hbox (10.74715pt too wide) in paragraph at lines 961--961 [] \OT1/cmtt/m/n/10 Name of file containing network structure in BIF fo rmat[] [130] [131] Overfull \hbox (641.9914pt too wide) in paragraph at lines 1043--1043 []\OT1/cmtt/m/n/10 Scheme: weka.classifiers.bayes.BayesNet -D -B iris.xml -Q weka.classifiers.bayes.net.search.local.K2 -- -P 2 -S BAYES -E weka.classif iers.bayes.net.estimate.SimpleEstimator -- -A 0.5[] Overfull \hbox (106.49606pt too wide) in paragraph at lines 1061--1061 []\OT1/cmtt/m/n/10 Relation: iris-weka.filters.unsupervised.attribute.Discr etize-B2-M-1.0-Rfirst-last[] LaTeX Warning: Citation `Moore' on page 132 undefined on input line 1062. [132] Overfull \hbox (1.49698pt too wide) in paragraph at lines 1123--1123 []\OT1/cmtt/m/n/10 Correctly Classified Instances 116 77. 3333 %[] Overfull \hbox (1.49698pt too wide) in paragraph at lines 1123--1123 []\OT1/cmtt/m/n/10 Incorrectly Classified Instances 34 22. 6667 %[] [133] [134] Underfull \hbox (badness 10000) in paragraph at lines 1181--1191 [135] Overfull \hbox (109.99007pt too wide) in paragraph at lines 1199--1200 [] Underfull \vbox (badness 4569) has occurred while \output is active [136] LaTeX Warning: Citation `cozman' on page 137 undefined on input line 1230. Overfull \hbox (31.52597pt too wide) in paragraph at lines 1232--1244 \OT1/cmr/m/n/10 vari-ables are dis-cretized us-ing the \OT1/cmtt/m/n/10 weka.fi lters.supervised.attribute.Discretize Underfull \vbox (badness 10000) has occurred while \output is active [137] [138] Underfull \hbox (badness 10000) in paragraph at lines 1298--1308 Overfull \hbox (5.15332pt too wide) in paragraph at lines 1316--1319 []\OT1/cmr/m/n/10 The Gen-er-ate Net-work menu al-lows gen-er-a-tion of a com-p lete ran-dom Bayesian [139] [140] LaTeX Warning: Citation `lauritzen' on page 141 undefined on input line 1368. Overfull \hbox (17.96149pt too wide) in paragraph at lines 1375--1376 [] Underfull \vbox (badness 10000) has occurred while \output is active [141] Overfull \hbox (11.45515pt too wide) in paragraph at lines 1409--1410 [] [142] [143] [144] Underfull \vbox (badness 1675) has occurred while \output is active [145] [146] [147] Overfull \hbox (76.10909pt too wide) in paragraph at lines 1570--1576 []\OT1/cmr/m/n/10 Create a class that de-rives from \OT1/cmtt/m/n/10 weka.class ifiers.bayes.net.search.SearchAlgorithm\OT1/cmr/m/n/10 . Overfull \hbox (6.74959pt too wide) in paragraph at lines 1570--1576 \OT1/cmr/m/n/10 validation based, you prob-a-bly want to de-rive from \OT1/cmtt /m/n/10 ScoreSearchAlgorithm\OT1/cmr/m/n/10 , Overfull \hbox (56.55356pt too wide) in paragraph at lines 1570--1576 \OT1/cmtt/m/n/10 CISearchAlgorithm \OT1/cmr/m/n/10 or \OT1/cmtt/m/n/10 CVSearch Algorithm \OT1/cmr/m/n/10 in-stead of de-riv-ing from \OT1/cmtt/m/n/10 SearchAl gorithm Overfull \hbox (29.2748pt too wide) in paragraph at lines 1577--1582 \OT1/cmtt/m/n/10 public void buildStructure(BayesNet bayesNet, Instances instan ces)\OT1/cmr/m/n/10 . Overfull \hbox (6.05424pt too wide) in paragraph at lines 1577--1582 \OT1/cmr/m/n/10 You can ac-cess the par-entsets us-ing \OT1/cmtt/m/n/10 bayesNe t.getParentSet(iAttribute) Overfull \hbox (10.74715pt too wide) in paragraph at lines 1583--1587 \OT1/cmtt/m/n/10 bayesNet.getParentSet(iAttribute).AddParent(iParent, instances ) Overfull \hbox (36.44255pt too wide) in paragraph at lines 1588--1596 []\OT1/cmr/m/n/10 Alternatively, im-ple-ment \OT1/cmtt/m/n/10 public void searc h(BayesNet bayesNet, Instances Overfull \hbox (2.57175pt too wide) in paragraph at lines 1617--1621 \OT1/cmtt/m/n/10 weka.classifiers.bayes.net.estimate.BayesNetEstimator\OT1/cmr/ m/n/10 . Let's say Overfull \hbox (29.2748pt too wide) in paragraph at lines 1622--1627 \OT1/cmtt/m/n/10 public void updateClassifier(BayesNet bayesNet, Instance insta nce)\OT1/cmr/m/n/10 , Overfull \hbox (31.74696pt too wide) in paragraph at lines 1622--1627 \OT1/cmtt/m/n/10 public double[] distributionForInstance(BayesNet bayesNet, Ins tance [148] Overfull \hbox (7.02576pt too wide) in paragraph at lines 1644--1648 \OT1/cmr/m/n/10 Use the class \OT1/cmtt/m/n/10 weka.filters.unsupervised.attrib ute.Discretize \OT1/cmr/m/n/10 to dis-cretize Overfull \hbox (27.74675pt too wide) in paragraph at lines 1644--1648 \OT1/cmtt/m/n/10 java weka.filters.unsupervised.attribute.Discretize -B 3 -i in file.arff Overfull \hbox (1.49698pt too wide) in paragraph at lines 1655--1659 \OT1/cmtt/m/n/10 java weka.classifiers.bayes.net.BayesNetGenerator -B -N 10 -A 9 -C Overfull \hbox (1.49698pt too wide) in paragraph at lines 1661--1665 \OT1/cmtt/m/n/10 java weka.classifiers.bayes.net.BayesNetGenerator -N 15 -A 20 -C 3 Overfull \hbox (22.4968pt too wide) in paragraph at lines 1667--1671 \OT1/cmtt/m/n/10 java weka.classifiers.bayes.net.BayesNetGenerator -F alarm.xml -M 1000 [149] [150] Overfull \hbox (5.66734pt too wide) in paragraph at lines 1731--1735 []\OT1/cmr/m/n/10 Only leave-one-out, k-fold and cu-mu-la-tive cross-validation are im-ple-mented. Overfull \hbox (8.08392pt too wide) in paragraph at lines 1731--1735 \OT1/cmr/m/n/10 These im-ple-men-ta-tions can be made more ef-fi-cient and othe r cross-validation ) [151] [152] [153] [154] Chapter 9. (./arff.tex Overfull \hbox (6.74693pt too wide) in paragraph at lines 41--41 [] \OT1/cmtt/m/n/10 % (b) Donor: Michael Marshall (MARSHALL%PLU@io.arc.na sa.gov)[] Overfull \hbox (22.4968pt too wide) in paragraph at lines 41--41 [] \OT1/cmtt/m/n/10 @ATTRIBUTE class {Iris-setosa,Iris-versicolor,Iris- virginica}[] [155] (/usr/share/texlive/texmf-dist/tex/latex/base/ts1cmtt.fd) [156] Overfull \hbox (2.27603pt too wide) in paragraph at lines 116--117 \OT1/cmr/m/n/10 pos-si-ble val-ues: $\OML/cmm/m/it/10 <$\OT1/cmtt/m/n/10 nomina l-name1$\OML/cmm/m/it/10 >$\OT1/cmtt/m/n/10 , $\OML/cmm/m/it/10 <$\OT1/cmtt/m/n /10 nominal-name2$\OML/cmm/m/it/10 >$\OT1/cmtt/m/n/10 , $\OML/cmm/m/it/10 <$\OT 1/cmtt/m/n/10 nominal-name3$\OML/cmm/m/it/10 >$\OT1/cmtt/m/n/10 , [157] [158] [159]) [160] Chapter 10. (./xrff.tex [161] Overfull \hbox (80.24629pt too wide) in paragraph at lines 127--127 [] \OT1/cmtt/m/n/10 [] [162] [163] [164]) [165] [166] Chapter 11. (./converters.tex [167] Overfull \hbox (0.24724pt too wide) in paragraph at lines 60--60 [] \OT1/cmtt/m/n/10 java weka.core.converters.CSVLoader iris.csv > iris.ar ff[] Overfull \hbox (15.9971pt too wide) in paragraph at lines 70--70 [] \OT1/cmtt/m/n/10 java weka.core.converters.CSVSaver -i iris.arff -o iri s.csv[] [168] Overfull \hbox (57.99673pt too wide) in paragraph at lines 99--99 [] \OT1/cmtt/m/n/10 java weka.core.converters.DatabaseLoader -Q "select * f rom employee"[] Overfull \hbox (21.24706pt too wide) in paragraph at lines 104--104 [] \OT1/cmtt/m/n/10 java weka.core.converters.DatabaseSaver -i iris.arff - T iris[] ) [169] [170] Chapter 12. (./stemmers.tex Overfull \hbox (68.33246pt too wide) in paragraph at lines 29--30 \OT1/cmr/m/n/10 Weka con-tains a wrap-per class for the Snow-ball (home-page: [ ][][][]) [171] Overfull \hbox (46.33209pt too wide) in paragraph at lines 49--50 []\OT1/cmr/m/n/10 within the String-ToWord-Vec-tor (pack-age \OT1/cmtt/m/n/10 w eka.filters.unsupervised.attribute\OT1/cmr/m/n/10 ) Overfull \hbox (4.85867pt too wide) in paragraph at lines 73--74 \OT1/cmr/m/n/10 the \OT1/cmtt/m/n/10 GenericObjectEditor.props\OT1/cmr/m/n/10 / \OT1/cmtt/m/n/10 GenericPropertiesCreator.props \OT1/cmr/m/n/10 file ) [172] Chapter 13. (./databases.tex Overfull \hbox (9.77429pt too wide) in paragraph at lines 37--38 []\OT1/cmtt/m/n/10 DatabaseUtils.props.mssqlserver2005 \OT1/cmr/m/n/10 - MS SQL Server 2005 ($\OML/cmm/m/it/10 >\OT1/cmr/m/n/10 =$3.4.11, Overfull \hbox (9.10817pt too wide) in paragraph at lines 39--41 []\OT1/cmtt/m/n/10 DatabaseUtils.props.odbc \OT1/cmr/m/n/10 - ODBC ac-cess via Sun's ODBC/JDBC bridge, Underfull \hbox (badness 10000) in paragraph at lines 46--47 Underfull \hbox (badness 10000) in paragraph at lines 48--49 [173] [174] Overfull \hbox (89.10794pt too wide) in paragraph at lines 103--108 \OT1/cmtt/m/n/10 jdbc:postgresql://server.my.domain:5432/MyDatabase?user=$\OML/ cmm/m/it/10 <$\OT1/cmtt/m/n/10 ...$\OML/cmm/m/it/10 >$\OT1/cmtt/m/n/10 &passwor d=$\OML/cmm/m/it/10 <$\OT1/cmtt/m/n/10 ...$\OML/cmm/m/it/10 >$ Underfull \vbox (badness 3679) has occurred while \output is active [175] [176] Overfull \hbox (27.9972pt too wide) in paragraph at lines 183--185 [][][][] Overfull \hbox (0.8047pt too wide) in paragraph at lines 201--202 \OT1/cmr/m/n/10 com-mand \OT1/cmtt/m/n/10 java weka.core.SystemInfo \OT1/cmr/m/ n/10 and check whether the prop- [177]) [178] Chapter 14. (./windows_databases.tex [179] [180]) [181] [182] [183] [184] Chapter 15. (./research.tex Overfull \hbox (31.02701pt too wide) in paragraph at lines 32--33 \OT1/cmr/m/n/10 ter-face it is now easy to ex-tract all the pa-per ref-er-ences via \OT1/cmtt/m/n/10 weka.core.ClassDiscovery [185] (./includes/get_wekatechinfo.tex [186] Overfull \hbox (90.0991pt too wide) in paragraph at lines 124--124 []\OT1/cmtt/m/n/7 TECHINFOHANDLERS=`$JAVA weka.core.ClassDiscovery $TECHINFOHAN DLER $PACKAGES | grep "\. weka" | sed s/".*weka"/weka/g`[] )) [187] [188] Chapter 16. (./using_api.tex Underfull \hbox (badness 10000) in paragraph at lines 35--40 [189] LaTeX Warning: Citation `wekawiki' on page 190 undefined on input line 108. LaTeX Warning: Citation `wekaexamples' on page 190 undefined on input line 111. Overfull \hbox (3.8326pt too wide) in paragraph at lines 104--113 \OT1/cmr/m/n/10 support-vector ma-chine clas-si-fier \OT1/cmr/m/it/10 SMO \OT1/ cmr/m/n/10 (pack-age \OT1/cmtt/m/n/10 weka.classifiers.functions\OT1/cmr/m/n/10 ) [190] Overfull \hbox (8.05441pt too wide) in paragraph at lines 125--130 \OT1/cmr/m/n/10 method, it is best to have a look at the \OT1/cmtt/m/n/10 setOp tions(String[]) \OT1/cmr/m/n/10 and \OT1/cmtt/m/n/10 getOptions() Overfull \hbox (6.08145pt too wide) in paragraph at lines 140--148 []\OT1/cmr/m/n/10 A \OT1/cmtt/m/n/10 SelectedTag \OT1/cmr/m/n/10 gets con-struc ted us-ing the ar-ray of all pos-si-ble \OT1/cmtt/m/n/10 weka.core.Tag Overfull \hbox (11.99689pt too wide) in paragraph at lines 156--156 [] \OT1/cmtt/m/n/10 setEvaluation(new SelectedTag(EVALUATION_CC, TAGS_EVALU ATION));[] [191] LaTeX Warning: Reference `databases' on page 192 undefined on input line 168. LaTeX Warning: Citation `wekaexamples' on page 192 undefined on input line 174. Overfull \hbox (1.93398pt too wide) in paragraph at lines 178--183 \OT1/cmr/m/n/10 the \OT1/cmtt/m/n/10 attribute(int) \OT1/cmr/m/n/10 method. Thi s method re-turns \OT1/cmtt/m/n/10 weka.core.Attribute Overfull \hbox (27.33139pt too wide) in paragraph at lines 203--206 []\OT1/cmr/m/n/10 The \OT1/cmtt/m/n/10 DataSource \OT1/cmr/m/n/10 class (in-ner class of the \OT1/cmtt/m/n/10 weka.core.converters.ConverterUtils [192] Underfull \hbox (badness 10000) in paragraph at lines 246--249 Overfull \hbox (3.25064pt too wide) in paragraph at lines 299--301 \OT1/cmr/m/n/10 loaded into mem-ory and then pro-vided row-by-row (``pseudo-inc remental''). [193] [194] LaTeX Warning: Citation `wekaexamples' on page 195 undefined on input line 319. Overfull \hbox (21.69957pt too wide) in paragraph at lines 318--321 \OT1/cmr/m/n/10 The class \OT1/cmtt/m/n/10 wekaexamples.core.CreateInstances \O T1/cmr/m/n/10 of the \OT1/cmr/m/it/10 Weka Ex-am-ples \OT1/cmr/m/n/10 collectio n[[]] Overfull \hbox (41.44293pt too wide) in paragraph at lines 332--335 \OT1/cmr/m/n/10 For all of the dif-fer-ent at-tribute types, WEKA uses the same class, \OT1/cmtt/m/n/10 weka.core.Attribute\OT1/cmr/m/n/10 , Overfull \hbox (10.74715pt too wide) in paragraph at lines 351--351 [] \OT1/cmtt/m/n/10 Attribute date = new Attribute("name_of_attr", "yyyy-MM-d d");[] Overfull \hbox (47.49683pt too wide) in paragraph at lines 372--372 [] \OT1/cmtt/m/n/10 Attribute string = new Attribute("name_of_attr", (FastVec tor) null);[] Underfull \vbox (badness 10000) has occurred while \output is active [195] Overfull \vbox (76.493pt too high) has occurred while \output is active [196] Overfull \hbox (31.74696pt too wide) in paragraph at lines 390--390 [] \OT1/cmtt/m/n/10 Attribute relational = new Attribute("name_of_attr", rel_ struct);[] Overfull \hbox (11.99689pt too wide) in paragraph at lines 408--408 [] \OT1/cmtt/m/n/10 Instances dataset = new Instances("Test-dataset", attribu tes, 0);[] Overfull \hbox (9.12917pt too wide) in paragraph at lines 418--421 \OT1/cmr/m/n/10 to it, row by row. There are ba-si-cally two con-struc-tors of the \OT1/cmtt/m/n/10 weka.core.Instance Overfull \hbox (12.8311pt too wide) in paragraph at lines 422--426 []\OT1/cmtt/m/n/10 Instance(double weight, double[] attValues) \OT1/cmr/m/n/10 -- gen-er-ates an \OT1/cmtt/m/n/10 Instance Overfull \vbox (46.59024pt too high) has occurred while \output is active [197] Overfull \hbox (26.49701pt too wide) in paragraph at lines 468--468 [] \OT1/cmtt/m/n/10 values[3] = data.attribute(3).addStringValue("This is a st ring");[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 480--480 [] \OT1/cmtt/m/n/10 Instances dataRel = new Instances(data.attribute(4).relati on(),0);[] [198] Overfull \hbox (24.165pt too wide) in paragraph at lines 501--504 \OT1/cmr/m/n/10 Simply gen-er-at-ing an ARFF file is achieved us-ing the static \OT1/cmtt/m/n/10 DataGenerator.makeData Overfull \hbox (28.96251pt too wide) in paragraph at lines 501--504 \OT1/cmr/m/n/10 method. In or-der to write to a file, the gen-er-a-tor needs to have a \OT1/cmtt/m/n/10 java.io.PrintWriter Overfull \hbox (6.74693pt too wide) in paragraph at lines 520--520 [] \OT1/cmtt/m/n/10 new java.io.BufferedWriter(new java.io.FileWriter("rdg1.ar ff")));[] [199] LaTeX Warning: Reference `api_filtering' on page 200 undefined on input line 56 9. Overfull \hbox (20.5538pt too wide) in paragraph at lines 567--570 []\OT1/cmr/m/n/10 Using the \OT1/cmtt/m/n/10 Randomize \OT1/cmr/m/n/10 fil-ter (pack-age \OT1/cmtt/m/n/10 weka.filters.unsupervised.instance\OT1/cmr/m/n/10 ). [200] LaTeX Warning: Citation `wekaexamples' on page 201 undefined on input line 650. [201] Overfull \hbox (22.4968pt too wide) in paragraph at lines 671--671 [] \OT1/cmtt/m/n/10 remove.setInputFormat(data); // inform filter abo ut dataset[] Overfull \hbox (11.99689pt too wide) in paragraph at lines 671--671 [] \OT1/cmtt/m/n/10 // **AFTER** setting options[] Overfull \hbox (22.4968pt too wide) in paragraph at lines 671--671 [] \OT1/cmtt/m/n/10 Instances newData = Filter.useFilter(data, remove); // ap ply filter[] Overfull \hbox (18.08133pt too wide) in paragraph at lines 672--677 \OT1/cmr/m/n/10 A com-mon trap to fall into is set-ting op-tions \OT1/cmr/bx/n/ 10 af-ter \OT1/cmr/m/n/10 the \OT1/cmtt/m/n/10 setInputFormat(Instances) Overfull \hbox (5.97029pt too wide) in paragraph at lines 689--693 \OT1/cmr/m/n/10 with the \OT1/cmtt/m/n/10 Standardize \OT1/cmr/m/n/10 fil-ter ( pack-age \OT1/cmtt/m/n/10 weka.filters.unsupervised.attribute\OT1/cmr/m/n/10 ): [202] Overfull \hbox (17.5531pt too wide) in paragraph at lines 710--721 \OT1/cmr/m/n/10 like \OT1/cmtt/m/n/10 FilteredClassifier \OT1/cmr/m/n/10 (pack- age \OT1/cmtt/m/n/10 weka.classifiers.meta\OT1/cmr/m/n/10 ), \OT1/cmtt/m/n/10 F ilteredClusterer Overfull \hbox (12.72011pt too wide) in paragraph at lines 710--721 \OT1/cmr/m/n/10 (pack-age \OT1/cmtt/m/n/10 weka.clusterers\OT1/cmr/m/n/10 ), \O T1/cmtt/m/n/10 FilteredAssociator \OT1/cmr/m/n/10 (pack-age \OT1/cmtt/m/n/10 we ka.associations\OT1/cmr/m/n/10 ) Overfull \hbox (27.16393pt too wide) in paragraph at lines 710--721 \OT1/cmr/m/n/10 and \OT1/cmtt/m/n/10 FilteredAttributeEval\OT1/cmr/m/n/10 /\OT1 /cmtt/m/n/10 FilteredSubsetEval \OT1/cmr/m/n/10 (in \OT1/cmtt/m/n/10 weka.attri buteSelection\OT1/cmr/m/n/10 ). LaTeX Warning: Reference `api_classification' on page 203 undefined on input li ne 729. [203] LaTeX Warning: Citation `wekaexamples' on page 204 undefined on input line 780. LaTeX Warning: Reference `api_loading_data' on page 204 undefined on input line 823. Overfull \hbox (20.1095pt too wide) in paragraph at lines 817--824 \OT1/cmr/m/n/10 All in-cre-men-tal clas-si-fiers in WEKA im-ple-ment the in-ter -face \OT1/cmtt/m/n/10 UpdateableClassifier Overfull \hbox (5.91695pt too wide) in paragraph at lines 831--833 []\OT1/cmr/m/it/10 update \OT1/cmr/m/n/10 the model row-by-row, by call-ing the \OT1/cmtt/m/n/10 updateClassifier(Instance) [204] [205] Overfull \hbox (21.05566pt too wide) in paragraph at lines 872--874 \OT1/cmr/m/n/10 The eval-u-a-tion step, in-clud-ing col-lec-tion of statis-tics , is per-formed by the \OT1/cmtt/m/n/10 Evaluation LaTeX Warning: Reference `api_randomizing_data' on page 206 undefined on input line 890. [206] Overfull \hbox (11.99689pt too wide) in paragraph at lines 910--910 [] \OT1/cmtt/m/n/10 System.out.println(eval.toSummaryString("\nResults\n\n", false));[] Overfull \hbox (11.99689pt too wide) in paragraph at lines 940--940 [] \OT1/cmtt/m/n/10 System.out.println(eval.toSummaryString("\nResults\n\n", false));[] [207] Overfull \hbox (11.55396pt too wide) in paragraph at lines 950--952 []\OT1/cmtt/m/n/10 toClassDetailsString \OT1/cmr/m/n/10 -- out-puts TP/FP rates , pre-ci-sion, re-call, F-measure, Overfull \hbox (0.47084pt too wide) in paragraph at lines 952--954 []\OT1/cmtt/m/n/10 toCumulativeMarginDistributionString \OT1/cmr/m/n/10 -- out- puts the cu-mu-la-tive mar- [208] LaTeX Warning: Reference `api_filtering_onthefly' on page 209 undefined on inpu t line 996. Overfull \hbox (27.74675pt too wide) in paragraph at lines 1017--1017 [] \OT1/cmtt/m/n/10 Instances unlabeled = DataSource.read("/some/where/unlabe led.arff");[] Overfull \hbox (11.99689pt too wide) in paragraph at lines 1017--1017 [] \OT1/cmtt/m/n/10 double clsLabel = tree.classifyInstance(unlabeled.insta nce(i));[] Overfull \hbox (6.74693pt too wide) in paragraph at lines 1048--1048 [] \OT1/cmtt/m/n/10 double[] dist = cls.distributionForInstance(test.instan ce(i));[] Overfull \hbox (53.99652pt too wide) in paragraph at lines 1048--1048 [] \OT1/cmtt/m/n/10 System.out.print(test.instance(i).toString(test.classIn dex()) + " - ");[] Overfull \hbox (27.74675pt too wide) in paragraph at lines 1048--1048 [] \OT1/cmtt/m/n/10 System.out.print(test.classAttribute().value((int) pred ) + " - ");[] [209] LaTeX Warning: Citation `wekaexamples' on page 210 undefined on input line 1069 . Overfull \hbox (12.30984pt too wide) in paragraph at lines 1083--1087 []\OT1/cmr/m/it/10 build the model \OT1/cmr/m/n/10 with train-ing data -- call- ing the \OT1/cmtt/m/n/10 buildClusterer(Instances) Overfull \hbox (0.94284pt too wide) in paragraph at lines 1104--1108 \OT1/cmr/m/n/10 Incremental clus-ter-ers in WEKA im-ple-ment the in-ter-face \O T1/cmtt/m/n/10 UpdateableClusterer Overfull \hbox (13.7781pt too wide) in paragraph at lines 1112--1114 []\OT1/cmr/m/it/10 update \OT1/cmr/m/n/10 the model row-by-row by call-ing the the \OT1/cmtt/m/n/10 updateClusterer(Instance) Underfull \vbox (badness 10000) has occurred while \output is active [210] Overfull \vbox (79.67348pt too high) has occurred while \output is active [211] [212] Overfull \hbox (59.24648pt too wide) in paragraph at lines 1160--1160 [] \OT1/cmtt/m/n/10 System.out.println(ClusterEvaluation.evaluateClusterer(new EM(), options));[] Overfull \hbox (53.99652pt too wide) in paragraph at lines 1195--1195 [] \OT1/cmtt/m/n/10 DensityBasedClusterer clusterer = new ... // the clust erer to evaluate[] Overfull \hbox (64.49643pt too wide) in paragraph at lines 1195--1195 [] \OT1/cmtt/m/n/10 new Random(1)); // and rando m number generator[] [213] Overfull \hbox (0.24724pt too wide) in paragraph at lines 1222--1222 [] \OT1/cmtt/m/n/10 filter.setAttributeIndices("" + (data.classIndex() + 1) );[] Overfull \hbox (0.24724pt too wide) in paragraph at lines 1222--1222 [] \OT1/cmtt/m/n/10 Instances dataClusterer = Filter.useFilter(data, filter );[] [214] Overfull \hbox (3.69315pt too wide) in paragraph at lines 1247--1249 []\OT1/cmtt/m/n/10 clusterInstance(Instance) \OT1/cmr/m/n/10 -- de-ter-mines th e clus-ter the \OT1/cmtt/m/n/10 Instance \OT1/cmr/m/n/10 would Overfull \hbox (6.74693pt too wide) in paragraph at lines 1276--1276 [] \OT1/cmtt/m/n/10 int cluster = clusterer.clusterInstance(dataset2.instan ce(i));[] Overfull \hbox (59.24648pt too wide) in paragraph at lines 1276--1276 [] \OT1/cmtt/m/n/10 double[] dist = clusterer.distributionForInstance(datas et2.instance(i));[] [215] Underfull \hbox (badness 10000) in paragraph at lines 1285--1290 Overfull \hbox (3.35565pt too wide) in paragraph at lines 1293--1298 []\OT1/cmr/m/it/10 single at-tribute eval-u-a-tors \OT1/cmr/m/n/10 -- per-form eval-u-a-tions on sin-gle at-tributes. These LaTeX Warning: Citation `wekaexamples' on page 216 undefined on input line 1339 . [216] Overfull \hbox (64.49643pt too wide) in paragraph at lines 1378--1378 [] \OT1/cmtt/m/n/10 AttributeSelectedClassifier classifier = new AttributeSel ectedClassifier();[] Overfull \hbox (22.4968pt too wide) in paragraph at lines 1378--1378 [] \OT1/cmtt/m/n/10 evaluation.crossValidateModel(classifier, data, 10, new R andom(1));[] [217] Overfull \hbox (27.4348pt too wide) in paragraph at lines 1383--1388 \OT1/cmr/m/n/10 train-ing a clas-si-fier, then the fil-ter ap-proach is the rig ht one. The \OT1/cmtt/m/n/10 AttributeSelection [218] [219] LaTeX Warning: Reference `api_loading_data' on page 220 undefined on input line 1459. LaTeX Warning: Citation `wekaexamples' on page 220 undefined on input line 1462 . Overfull \hbox (50.86061pt too wide) in paragraph at lines 1465--1470 \OT1/cmr/m/n/10 ing the data or use an ex-plicit con-verter (all savers are lo- cated in the \OT1/cmtt/m/n/10 weka.core.converters Overfull \hbox (22.94261pt too wide) in paragraph at lines 1471--1474 []\OT1/cmr/m/n/10 Use the \OT1/cmtt/m/n/10 DataSink \OT1/cmr/m/n/10 class (in-n er class of \OT1/cmtt/m/n/10 weka.core.converters.ConverterUtils\OT1/cmr/m/n/10 ), [220] [221] LaTeX Warning: Citation `wekaexamples' on page 222 undefined on input line 1562 . Overfull \hbox (34.02615pt too wide) in paragraph at lines 1575--1578 \OT1/cmr/m/n/10 tions, us-ing the \OT1/cmtt/m/n/10 ThresholdCurve \OT1/cmr/m/n/ 10 class (pack-age \OT1/cmtt/m/n/10 weka.classifiers.evaluation\OT1/cmr/m/n/10 ). Overfull \hbox (30.6928pt too wide) in paragraph at lines 1580--1583 \OT1/cmr/m/n/10 in-stance of the \OT1/cmtt/m/n/10 ThresholdVisualizePanel \OT1/ cmr/m/n/10 class (pack-age \OT1/cmtt/m/n/10 weka.gui.visualize\OT1/cmr/m/n/10 ) . Overfull \hbox (15.9971pt too wide) in paragraph at lines 1594--1594 [] \OT1/cmtt/m/n/10 Instances curve = tc.getCurve(eval.predictions(), classIn dex);[] Overfull \hbox (5.4972pt too wide) in paragraph at lines 1610--1610 [] \OT1/cmtt/m/n/10 ThresholdVisualizePanel tvp = new ThresholdVisualizePanel ();[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 1610--1610 [] \OT1/cmtt/m/n/10 Utils.doubleToString(ThresholdCurve.getROCArea(curve),4 )+")");[] Overfull \hbox (0.24724pt too wide) in paragraph at lines 1620--1620 [] \OT1/cmtt/m/n/10 final JFrame jf = new JFrame("WEKA ROC: " + tvp.getName() );[] Underfull \vbox (badness 10000) has occurred while \output is active [222] Overfull \vbox (24.493pt too high) has occurred while \output is active [223] LaTeX Warning: Citation `dotformat' on page 224 undefined on input line 1641. Overfull \hbox (1.49698pt too wide) in paragraph at lines 1665--1665 [] \OT1/cmtt/m/n/10 JFrame jf = new JFrame("Weka Classifier Tree Visualizer: J48");[] [224] LaTeX Warning: Citation `dotformat' on page 225 undefined on input line 1673. LaTeX Warning: Citation `cozman' on page 225 undefined on input line 1674. [225] [226] Overfull \hbox (17.24684pt too wide) in paragraph at lines 1778--1778 [] \OT1/cmtt/m/n/10 Object o[] = SerializationHelper.readAll("/some/where/j48 .model");[] ) [227] [228] Chapter 17. (./extending.tex LaTeX Warning: Reference `genericobjecteditor' on page 229 undefined on input l ine 35. [229] (./extending_classifier.tex Underfull \vbox (badness 10000) has occurred while \output is active [230] Overfull \vbox (64.17354pt too high) has occurred while \output is active [231] [232] [233] Overfull \hbox (6.74693pt too wide) in paragraph at lines 192--192 [] \OT1/cmtt/m/n/10 result.addAll(Arrays.asList(super.getOptions())); // sup erclass[] LaTeX Warning: Reference `classifier_capabilities' on page 234 undefined on inp ut line 200. Overfull \hbox (30.47186pt too wide) in paragraph at lines 227--231 \OT1/cmr/m/n/10 re-turns the class prob-a-bil-i-ties ar-ray of the pre-dic-tion for the given \OT1/cmtt/m/n/10 weka.core.Instance [234] Overfull \hbox (42.88777pt too wide) in paragraph at lines 232--243 \OT1/cmr/m/n/10 bel in-dex based on the prob-a-bil-i-ties ar-ray that the \OT1/ cmtt/m/n/10 distributionForInstance(Instance) [235] [236] [237] Underfull \hbox (badness 10000) in paragraph at lines 360--374 Overfull \hbox (0.55939pt too wide) in paragraph at lines 390--397 []\OT1/cmr/m/it/10 multi-instance clas-si-fiers \OT1/cmr/m/n/10 -- in or-der to sig-nal that the spe-cial multi-instance Overfull \hbox (5.27605pt too wide) in paragraph at lines 390--397 \OT1/cmr/m/n/10 instance, \OT1/cmtt/m/n/10 weka.core.MultiInstanceCapabilitiesH andler\OT1/cmr/m/n/10 , which re-turns [238] Overfull \hbox (5.08153pt too wide) in paragraph at lines 441--446 \OT1/cmr/m/n/10 in case of de-scen-dants of the \OT1/cmtt/m/n/10 weka.classifie r.MultipleClassifiersCombiner\OT1/cmr/m/n/10 , Overfull \hbox (14.09583pt too wide) in paragraph at lines 461--461 [] \OT1/cmtt/m/n/9 result.enable(Capability.NOMINAL_CLASS); // only nominal classes allowed[] [239] Overfull \vbox (104.0pt too high) has occurred while \output is active [240] [241] Overfull \hbox (17.24684pt too wide) in paragraph at lines 603--603 [] \OT1/cmtt/m/n/10 weka.core.CheckOptionHandler -W classname [-- additional pa rameters][] Overfull \hbox (59.46141pt too wide) in paragraph at lines 640--645 \OT1/cmr/m/n/10 class. The su-per-class for clas-si-fier unit tests is \OT1/cmt t/m/n/10 weka.classifiers.AbstractClassifierTest\OT1/cmr/m/n/10 . ) [242] (./extending_filter.tex LaTeX Warning: Reference `filter_capabilities' on page 243 undefined on input l ine 63. LaTeX Warning: Reference `filter_optionhandling' on page 243 undefined on input line 66. Overfull \hbox (26.02608pt too wide) in paragraph at lines 63--67 \OT1/cmtt/m/n/10 weka.filters.Filter \OT1/cmr/m/n/10 su-per-class does not im-p le-ment the \OT1/cmtt/m/n/10 weka.core.OptionHandler [243] [244] Overfull \hbox (34.38815pt too wide) in paragraph at lines 125--132 \OT1/cmr/m/n/10 de-ter-mine what the out-put for-mat will be (and set if via \O T1/cmtt/m/n/10 setOutputFormat(Instances)\OT1/cmr/m/n/10 ) [245] (./includes/BatchFilter.tex) [246] (./includes/BatchFilter2.tex) [247] (./includes/BatchFilter3.tex) Overfull \vbox (68.45831pt too high) has occurred while \output is active [248] (./includes/StreamFilter.tex) [249] LaTeX Warning: Reference `filter_revisions' on page 250 undefined on input line 236. LaTeX Warning: Reference `classifier_methods' on page 250 undefined on input li ne 247. LaTeX Warning: Reference `classifier_parameters' on page 250 undefined on input line 248. [250] (./includes/SimpleBatch.tex Overfull \hbox (33.25543pt too wide) in paragraph at lines 45--45 [] \OT1/cmtt/m/n/8 return "A simple batch filter that adds an additional a ttribute 'blah' at the end "[] Overfull \hbox (7.75507pt too wide) in paragraph at lines 45--45 [] \OT1/cmtt/m/n/8 result.enable(Capability.NO_CLASS); //// filter doesn't need class to be set//[] ) [251] LaTeX Warning: Reference `filter_revisions' on page 252 undefined on input line 267. LaTeX Warning: Reference `classifier_methods' on page 252 undefined on input li ne 278. [252] (./includes/SimpleStream.tex Overfull \hbox (7.75507pt too wide) in paragraph at lines 50--50 [] \OT1/cmtt/m/n/8 result.enable(Capability.NO_CLASS); //// filter doesn't need class to be set//[] ) [253] LaTeX Warning: Reference `classifier_capabilities' on page 254 undefined on inp ut line 314. Overfull \hbox (15.32312pt too wide) in paragraph at lines 319--322 \OT1/cmr/m/n/10 bu-tions into ac-count. Must im-ple-ment the \OT1/cmtt/m/n/10 w eka.filters.SupervisedFilter LaTeX Warning: Reference `classifier_javadoc' on page 254 undefined on input li ne 337. Overfull \hbox (0.93573pt too wide) in paragraph at lines 336--338 \OT1/cmr/m/n/10 The Javadoc gen-er-a-tion works the same as with clas-si-fiers. See sec-tion ``Javadoc'' LaTeX Warning: Reference `classifier_revisions' on page 254 undefined on input line 348. [254] Overfull \hbox (17.24684pt too wide) in paragraph at lines 360--360 [] \OT1/cmtt/m/n/10 weka.core.CheckOptionHandler -W classname [-- additional pa rameters][] Overfull \hbox (77.71982pt too wide) in paragraph at lines 386--390 []\OT1/cmr/m/n/10 Here is an ex-am-ple call for \OT1/cmtt/m/n/10 weka.filters.u nsupervised.attribute.ReplaceMissingValues ) [255] (./extending_other_algorithms.tex Overfull \hbox (1.7496pt too wide) in paragraph at lines 36--39 \OT1/cmr/m/n/10 like the \OT1/cmtt/m/n/10 FilteredClusterer \OT1/cmr/m/n/10 tha t fil-ters the data on-the-fly for the base-clusterer. Underfull \hbox (badness 10000) in paragraph at lines 36--39 Overfull \hbox (56.46068pt too wide) in paragraph at lines 50--55 \OT1/cmr/m/n/10 one way or an-other. \OT1/cmtt/m/n/10 RandomizableClusterer\OT1 /cmr/m/n/10 , \OT1/cmtt/m/n/10 RandomizableDensityBasedClusterer [256] LaTeX Warning: Reference `classifier_capabilities' on page 257 undefined on inp ut line 87. Overfull \hbox (3.24855pt too wide) in paragraph at lines 116--118 \OT1/cmr/m/n/10 For ju-nit tests, you can sub-class the \OT1/cmtt/m/n/10 weka.c lusterers.AbstractClustererTest [257] Overfull \hbox (0.3597pt too wide) in paragraph at lines 137--140 \OT1/cmr/m/n/10 The an-ces-tor for all eval-u-a-tors is the \OT1/cmtt/m/n/10 we ka.attributeSelection.ASEvaluation Underfull \hbox (badness 10000) in paragraph at lines 137--140 [258] Overfull \hbox (10.55435pt too wide) in paragraph at lines 189--192 \OT1/cmr/m/n/10 The an-ces-tor for all search al-go-rithms is the \OT1/cmtt/m/n /10 weka.attributeSelection.ASSearch Underfull \hbox (badness 10000) in paragraph at lines 189--192 Overfull \hbox (45.24818pt too wide) in paragraph at lines 216--220 \OT1/cmr/m/n/10 For ju-nit tests, you can sub-class the \OT1/cmtt/m/n/10 weka.a ttributeSelection.AbstractEvaluatorTest [259] Overfull \hbox (5.08264pt too wide) in paragraph at lines 228--235 \OT1/cmr/m/n/10 can also im-ple-ment a meta-associator, de-rived from \OT1/cmtt /m/n/10 SingleAssociatorEnhancer\OT1/cmr/m/n/10 . Overfull \hbox (1.49698pt too wide) in paragraph at lines 258--258 [] \OT1/cmtt/m/n/10 public void buildAssociations(Instances data) throws Excep tion {[] LaTeX Warning: Reference `classifier_capabilities' on page 260 undefined on inp ut line 261. [260] Overfull \hbox (1.49698pt too wide) in paragraph at lines 283--283 [] \OT1/cmtt/m/n/10 AbstractAssociator.runAssociator(new FunkyAssociator(), args);[] Overfull \hbox (1.49698pt too wide) in paragraph at lines 290--290 [] \OT1/cmtt/m/n/10 weka.associations.CheckAssociator -W classname [further op tions][] ) Overfull \hbox (18.99841pt too wide) in paragraph at lines 291--62 \OT1/cmr/m/n/10 For ju-nit tests, you can sub-class the \OT1/cmtt/m/n/10 weka.a ssociations.AbstractAssociatorTest [261] (./extending_explorer.tex Overfull \hbox (11.74733pt too wide) in paragraph at lines 41--44 []\OT1/cmtt/m/n/10 weka.gui.explorer.Explorer.CapabilitiesFilterChangeListener Overfull \hbox (18.02759pt too wide) in paragraph at lines 45--47 []\OT1/cmr/m/n/10 adding the class-name of your class to the Tabs prop-erty in the \OT1/cmtt/m/n/10 Explorer.props LaTeX Warning: Citation `wekaexamples' on page 262 undefined on input line 52. Overfull \hbox (68.49664pt too wide) in paragraph at lines 85--85 [] \OT1/cmtt/m/n/10 /** sends notifications when the set of working instances gets changed*/[] Overfull \hbox (89.49646pt too wide) in paragraph at lines 85--85 [] \OT1/cmtt/m/n/10 protected PropertyChangeSupport m_Support = new PropertyC hangeSupport(this);[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 122--122 [] \OT1/cmtt/m/n/10 return "SQL"; // what's displayed as tab-title, e.g., Classify[] Overfull \hbox (52.74678pt too wide) in paragraph at lines 122--122 [] \OT1/cmtt/m/n/10 return "Retrieving data from databases"; // the toolti p of the tab[] Overfull \hbox (0.24724pt too wide) in paragraph at lines 122--122 [] \OT1/cmtt/m/n/10 /** ignored, since we "generate" data and not receive it */[] Overfull \hbox (57.99673pt too wide) in paragraph at lines 122--122 [] \OT1/cmtt/m/n/10 /** PropertyChangeListener which will be notified of valu e changes. */[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 122--122 [] \OT1/cmtt/m/n/10 public void addPropertyChangeListener(PropertyChangeListe ner l) {[] Overfull \hbox (47.49683pt too wide) in paragraph at lines 122--122 [] \OT1/cmtt/m/n/10 public void removePropertyChangeListener(PropertyChangeLi stener l) {[] [262] Overfull \vbox (91.59024pt too high) has occurred while \output is active [263] Overfull \hbox (31.74696pt too wide) in paragraph at lines 138--138 [] \OT1/cmtt/m/n/10 /** the Load button - makes the data available in the Exp lorer */[] Overfull \hbox (47.49683pt too wide) in paragraph at lines 171--171 [] \OT1/cmtt/m/n/10 Instances data = query.retrieveInstances(m_Viewer.g etQuery());[] Overfull \hbox (89.49646pt too wide) in paragraph at lines 171--171 [] \OT1/cmtt/m/n/10 // set data in preprocess panel (also notifies of c apabilties changes)[] Overfull \hbox (5.4972pt too wide) in paragraph at lines 171--171 [] \OT1/cmtt/m/n/10 getExplorer().getPreprocessPanel().setInstances(dat a);[] Overfull \vbox (69.0pt too high) has occurred while \output is active [264] [265] Overfull \hbox (68.49664pt too wide) in paragraph at lines 221--221 [] \OT1/cmtt/m/n/10 /** sends notifications when the set of working instances gets changed*/[] Overfull \hbox (89.49646pt too wide) in paragraph at lines 221--221 [] \OT1/cmtt/m/n/10 protected PropertyChangeSupport m_Support = new PropertyC hangeSupport(this);[] Overfull \hbox (89.49646pt too wide) in paragraph at lines 253--253 [] \OT1/cmtt/m/n/10 return "DataGeneration"; // what's displayed as tab-ti tle, e.g., Classify[] Overfull \hbox (52.74678pt too wide) in paragraph at lines 253--253 [] \OT1/cmtt/m/n/10 return "Generating artificial datasets"; // the toolti p of the tab[] Overfull \hbox (0.24724pt too wide) in paragraph at lines 253--253 [] \OT1/cmtt/m/n/10 /** ignored, since we "generate" data and not receive it */[] Overfull \hbox (57.99673pt too wide) in paragraph at lines 253--253 [] \OT1/cmtt/m/n/10 /** PropertyChangeListener which will be notified of valu e changes. */[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 253--253 [] \OT1/cmtt/m/n/10 public void addPropertyChangeListener(PropertyChangeListe ner l) {[] Overfull \hbox (47.49683pt too wide) in paragraph at lines 253--253 [] \OT1/cmtt/m/n/10 public void removePropertyChangeListener(PropertyChangeLi stener l) {[] Overfull \vbox (92.50687pt too high) has occurred while \output is active [266] Overfull \hbox (89.49646pt too wide) in paragraph at lines 269--269 [] \OT1/cmtt/m/n/10 protected GenericObjectEditor m_GeneratorEditor = new Gen ericObjectEditor();[] Overfull \hbox (10.74715pt too wide) in paragraph at lines 269--269 [] \OT1/cmtt/m/n/10 protected JButton m_ButtonGenerate = new JButton("Generat e");[] Overfull \hbox (84.2465pt too wide) in paragraph at lines 302--302 [] \OT1/cmtt/m/n/10 DataGenerator generator = (DataGenerator) m_Generator Editor.getValue();[] Overfull \hbox (78.99655pt too wide) in paragraph at lines 302--302 [] \OT1/cmtt/m/n/10 String cname = generator.getClass().getName().replace All(".*\\.", "");[] Overfull \hbox (89.49646pt too wide) in paragraph at lines 302--302 [] \OT1/cmtt/m/n/10 cmd += " "+Utils.joinOptions(((OptionHandler)genera tor).getOptions());[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 302--302 [] \OT1/cmtt/m/n/10 DataGenerator.makeData(generator, generator.getOpti ons());[] Overfull \hbox (47.49683pt too wide) in paragraph at lines 302--302 [] \OT1/cmtt/m/n/10 getExplorer(), "Error generating data:\n" + ex.ge tMessage(),[] Overfull \vbox (48.0pt too high) has occurred while \output is active [267] Overfull \hbox (84.2465pt too wide) in paragraph at lines 333--333 [] \OT1/cmtt/m/n/10 Instances data = new Instances(new StringReader(m_O utput.getText()));[] Overfull \hbox (89.49646pt too wide) in paragraph at lines 333--333 [] \OT1/cmtt/m/n/10 // set data in preprocess panel (also notifies of c apabilties changes)[] Overfull \hbox (5.4972pt too wide) in paragraph at lines 333--333 [] \OT1/cmtt/m/n/10 getExplorer().getPreprocessPanel().setInstances(dat a);[] Overfull \hbox (47.49683pt too wide) in paragraph at lines 333--333 [] \OT1/cmtt/m/n/10 getExplorer(), "Error generating data:\n" + ex.ge tMessage(),[] Overfull \vbox (81.85202pt too high) has occurred while \output is active [268] LaTeX Warning: Citation `wekawiki' on page 269 undefined on input line 375. Overfull \vbox (57.81944pt too high) has occurred while \output is active [269] LaTeX Warning: Citation `wekaexamples' on page 270 undefined on input line 402. Overfull \hbox (34.60944pt too wide) in paragraph at lines 418--422 \OT1/cmr/m/n/10 home di-rec-tory) un-der the key \OT1/cmtt/m/n/10 weka.gui.visu alize.plugins.VisualizePlugin\OT1/cmr/m/n/10 . [270] [271] LaTeX Warning: Citation `jmathplot' on page 272 undefined on input line 453. )) [272] Chapter 18. (./technical_documentation.tex Underfull \hbox (badness 10000) in paragraph at lines 21--22 [273] Underfull \hbox (badness 10000) in paragraph at lines 81--82 Underfull \hbox (badness 10000) in paragraph at lines 83--84 Underfull \hbox (badness 10000) in paragraph at lines 85--93 Underfull \hbox (badness 10000) in paragraph at lines 94--95 Underfull \hbox (badness 10000) in paragraph at lines 96--97 Underfull \hbox (badness 10000) in paragraph at lines 98--99 Underfull \hbox (badness 10000) in paragraph at lines 104--105 Underfull \hbox (badness 10000) in paragraph at lines 106--107 Overfull \hbox (95.24629pt too wide) in paragraph at lines 114--115 [][][]\OT1/cmtt/m/n/10 export CLASSPATH=$CLASSPATH:/home/johndoe/jars/mysql-con nector-java-5.1.7-bin.jar Overfull \hbox (95.24629pt too wide) in paragraph at lines 120--121 [][][]\OT1/cmtt/m/n/10 setenv CLASSPATH $CLASSPATH:/home/johndoe/jars/mysql-con nector-java-5.1.7-bin.jar [274] Underfull \hbox (badness 10000) in paragraph at lines 141--143 Underfull \hbox (badness 10000) in paragraph at lines 146--147 Underfull \hbox (badness 10000) in paragraph at lines 148--149 Underfull \hbox (badness 10000) in paragraph at lines 150--151 Underfull \hbox (badness 10000) in paragraph at lines 152--154 Underfull \hbox (badness 10000) in paragraph at lines 163--165 Underfull \hbox (badness 10000) in paragraph at lines 170--176 [275] Overfull \hbox (7.98488pt too wide) in paragraph at lines 177--178 \OT1/cmr/m/n/10 Here's once again how you start the Weka Main-GUI \OT1/cmr/bx/n /10 with \OT1/cmr/m/n/10 your cur-rent [][]\OT1/cmtt/m/n/10 CLASSPATH Overfull \hbox (0.24724pt too wide) in paragraph at lines 181--182 [][]\OT1/cmtt/m/n/10 java -Xmx128m -classpath "%CLASSPATH%;weka.jar" weka.gui.M ain Underfull \hbox (badness 10000) in paragraph at lines 187--188 Underfull \hbox (badness 10000) in paragraph at lines 189--190 Underfull \hbox (badness 10000) in paragraph at lines 210--211 Underfull \hbox (badness 10000) in paragraph at lines 212--213 Underfull \hbox (badness 10000) in paragraph at lines 214--215 Overfull \hbox (37.9968pt too wide) in paragraph at lines 216--217 [][][][][] Underfull \hbox (badness 10000) in paragraph at lines 216--217 Underfull \hbox (badness 10000) in paragraph at lines 219--220 [276] Underfull \hbox (badness 10000) in paragraph at lines 223--224 Overfull \hbox (43.24675pt too wide) in paragraph at lines 225--226 [][][][][] Underfull \hbox (badness 10000) in paragraph at lines 245--246 [277] Overfull \hbox (14.55481pt too wide) in paragraph at lines 265--274 \OT1/cmr/m/n/10 run-time (rather than us-ing only those spec-i-fied in the [][] \OT1/cmtt/m/n/10 GenericObjectEditor.props Underfull \hbox (badness 10000) in paragraph at lines 300--306 [278] Overfull \vbox (48.59024pt too high) has occurred while \output is active [279] Underfull \hbox (badness 10000) in paragraph at lines 375--380 Underfull \hbox (badness 10000) in paragraph at lines 381--382 Underfull \hbox (badness 10000) in paragraph at lines 383--384 Underfull \hbox (badness 10000) in paragraph at lines 385--386 Overfull \hbox (3.66528pt too wide) in paragraph at lines 387--390 \OT1/cmr/m/n/10 Where the [][]\OT1/cmtt/m/n/10 []\OT1/cmr/m/n/10 cor-re-s ponds to a key in the [][]\OT1/cmtt/m/n/10 GenericPropertiesCreator.props Overfull \hbox (64.49643pt too wide) in paragraph at lines 412--412 []\OT1/cmtt/m/n/10 # exclude all ResultListeners that also implement the Result Producer interface[] [280] Underfull \hbox (badness 10000) in paragraph at lines 416--427 Overfull \hbox (53.24666pt too wide) in paragraph at lines 428--429 [][][]\OT1/cmtt/m/n/10 java -classpath "/development:/distribution/weka.jar" we ka.gui.GUIChooser Underfull \hbox (badness 10000) in paragraph at lines 428--429 [281] Underfull \hbox (badness 10000) in paragraph at lines 456--457 [282] [283] Underfull \hbox (badness 10000) in paragraph at lines 493--494 Underfull \hbox (badness 10000) in paragraph at lines 495--496 Underfull \hbox (badness 10000) in paragraph at lines 497--498 Underfull \hbox (badness 10000) in paragraph at lines 520--524 [284] Overfull \hbox (17.24684pt too wide) in paragraph at lines 567--567 [] \OT1/cmtt/m/n/10 [] Underfull \hbox (badness 10000) in paragraph at lines 574--577 Underfull \hbox (badness 10000) in paragraph at lines 577--585 [285] Underfull \hbox (badness 10000) in paragraph at lines 586--592 Overfull \hbox (21.24706pt too wide) in paragraph at lines 600--600 [] \OT1/cmtt/m/n/10 [] Underfull \hbox (badness 10000) in paragraph at lines 606--611 Overfull \hbox (26.49701pt too wide) in paragraph at lines 615--615 [] \OT1/cmtt/m/n/10 [] [286] Overfull \hbox (4.64594pt too wide) in paragraph at lines 661--661 [] \OT1/cmtt/m/n/9 [] Overfull \hbox (4.64594pt too wide) in paragraph at lines 661--661 [] \OT1/cmtt/m/n/9 [] Overfull \hbox (32.9956pt too wide) in paragraph at lines 661--661 [] \OT1/cmtt/m/n/9 [] Overfull \hbox (37.72055pt too wide) in paragraph at lines 661--661 [] \OT1/cmtt/m/n/9 [] Overfull \hbox (9.37088pt too wide) in paragraph at lines 661--661 [] \OT1/cmtt/m/n/9 [] Underfull \hbox (badness 10000) in paragraph at lines 663--668 [287] Underfull \hbox (badness 10000) in paragraph at lines 722--723 Underfull \hbox (badness 10000) in paragraph at lines 724--725 [288] Overfull \hbox (43.80186pt too wide) in paragraph at lines 749--750 []\OT1/cmr/m/n/10 The DTD for KOML can be found at [][][][] Underfull \hbox (badness 10000) in paragraph at lines 749--750 Underfull \hbox (badness 10000) in paragraph at lines 751--752 Underfull \hbox (badness 10000) in paragraph at lines 753--754 Overfull \hbox (75.44197pt too wide) in paragraph at lines 756--759 \OT1/cmr/m/n/10 put file (see op-tions of [][]\OT1/cmtt/m/n/10 weka.experiment. Experiment []\OT1/cmr/m/n/10 and [][]\OT1/cmtt/m/n/10 weka.experiment.RemoteExp eriment LaTeX Warning: Reference `xml_command_line' on page 289 undefined on input line 787. Underfull \hbox (badness 10000) in paragraph at lines 783--790 Overfull \hbox (3.01225pt too wide) in paragraph at lines 799--805 \OT1/cmr/m/n/10 The GraphVi-su-al-izer ([][]\OT1/cmtt/m/n/10 weka.gui.graphvisu alizer.GraphVisualizer[]\OT1/cmr/m/n/10 ) can save [289] Overfull \hbox (17.24684pt too wide) in paragraph at lines 825--825 [] \OT1/cmtt/m/n/10 [] Overfull \hbox (11.99689pt too wide) in paragraph at lines 825--825 [] \OT1/cmtt/m/n/10 [] LaTeX Warning: Reference `xrff' on page 290 undefined on input line 838. ) [290] Chapter 19. (./other_resources.tex Underfull \hbox (badness 10000) in paragraph at lines 51--56 Underfull \hbox (badness 10000) in paragraph at lines 57--58 [291] Underfull \hbox (badness 10000) in paragraph at lines 65--68 LaTeX Warning: Reference `RunWeka.ini' on page 292 undefined on input line 76. Underfull \hbox (badness 10000) in paragraph at lines 91--93 Underfull \hbox (badness 10000) in paragraph at lines 94--95 Underfull \hbox (badness 10000) in paragraph at lines 106--108 Underfull \vbox (badness 1371) has occurred while \output is active [292] Overfull \hbox (5.99707pt too wide) in paragraph at lines 109--110 [][][]\OT1/cmtt/m/n/10 java weka.core.converters.CSVLoader filename.csv > filen ame.arff Underfull \hbox (badness 10000) in paragraph at lines 109--110 Underfull \hbox (badness 10000) in paragraph at lines 112--114 Underfull \hbox (badness 10000) in paragraph at lines 115--116 Underfull \hbox (badness 10000) in paragraph at lines 123--126 Underfull \hbox (badness 10000) in paragraph at lines 127--128 Overfull \hbox (16.19777pt too wide) in paragraph at lines 132--138 \OT1/cmr/m/n/10 Get-ting [][]\OT1/cmtt/m/n/10 java.lang.NoClassDefFoundError [] \OT1/cmr/m/n/10 ex-cep-tions? Most likely your \OT1/cmr/bx/n/10 CLASS- Underfull \hbox (badness 10000) in paragraph at lines 132--138 Underfull \hbox (badness 10000) in paragraph at lines 139--140 Underfull \hbox (badness 10000) in paragraph at lines 141--142 Underfull \hbox (badness 10000) in paragraph at lines 143--144 [293] Underfull \hbox (badness 10000) in paragraph at lines 145--148 Underfull \hbox (badness 10000) in paragraph at lines 149--150 LaTeX Warning: Reference `CLASSPATH' on page 294 undefined on input line 151. Underfull \hbox (badness 10000) in paragraph at lines 159--162 [294] Overfull \hbox (69.74638pt too wide) in paragraph at lines 236--236 []\OT1/cmtt/m/n/10 /usr/share/themes/Mist/gtk-2.0/gtkrc:48: Engine "mist" is un supported, ignoring[] Overfull \hbox (153.74565pt too wide) in paragraph at lines 236--236 [] \OT1/cmtt/m/n/10 at weka.gui.explorer.PreprocessPanel.addPropertyChang eListener(PreprocessPanel.java:519)[] Overfull \hbox (95.99615pt too wide) in paragraph at lines 236--236 [] \OT1/cmtt/m/n/10 at javax.swing.plaf.synth.SynthPanelUI.installListene rs(SynthPanelUI.java:49)[] Overfull \hbox (59.24648pt too wide) in paragraph at lines 236--236 [] \OT1/cmtt/m/n/10 at javax.swing.plaf.synth.SynthPanelUI.installUI(Synt hPanelUI.java:38)[] Underfull \hbox (badness 10000) in paragraph at lines 245--247 Underfull \hbox (badness 10000) in paragraph at lines 248--249 Underfull \hbox (badness 10000) in paragraph at lines 250--251 Underfull \hbox (badness 10000) in paragraph at lines 252--253 Underfull \hbox (badness 10000) in paragraph at lines 255--256 [295] Underfull \hbox (badness 10000) in paragraph at lines 257--258 LaTeX Warning: Reference `GUIChooserButNotExplorer' on page 296 undefined on in put line 260. Overfull \hbox (9.16362pt too wide) in paragraph at lines 264--265 []\OT1/cmr/m/n/10 Java VM op-tions ([][][][]) ) (./bibliography.tex [296] Underfull \hbox (badness 3514) in paragraph at lines 31--35 []\OT1/cmr/m/it/10 Weka Ex-am-ples \OT1/cmr/m/n/10 -- A col-lec-tion of ex-am-p le classes, as part of Underfull \hbox (badness 5119) in paragraph at lines 31--35 \OT1/cmr/m/n/10 an ANT project, in-cluded in the WEKA snap-shots (avail-able Underfull \hbox (badness 10000) in paragraph at lines 31--35 \OT1/cmr/m/n/10 for down-load on the home-page) or di-rectly from sub-ver-sion Overfull \hbox (64.80228pt too wide) in paragraph at lines 31--35 [][][][] Underfull \vbox (badness 10000) has occurred while \output is active [297] Overfull \vbox (45.33775pt too high) has occurred while \output is active [298] Overfull \hbox (22.2144pt too wide) in paragraph at lines 103--106 []\OT1/cmr/m/n/9 Cozman. See [][][][] ) [299] (./manual.aux) LaTeX Warning: There were undefined references. LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. Package rerunfilecheck Warning: File `manual.out' has changed. (rerunfilecheck) Rerun to get outlines right (rerunfilecheck) or use package `bookmark'. ) (see the transcript file for additional information) Output written on manual.dvi (299 pages, 796204 bytes). Transcript written on manual.log. This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=latex) restricted \write18 enabled. entering extended mode (./manual.tex LaTeX2e <2024-06-01> patch level 2 L3 programming layer <2024-08-16> (/usr/share/texlive/texmf-dist/tex/latex/base/book.cls Document Class: book 2024/02/08 v1.4n Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo)) (/usr/share/texlive/texmf-dist/tex/latex/graphics/epsfig.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/dvips.def)))) (/usr/share/texlive/texmf-dist/tex/latex/wrapfig/wrapfig.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty) (/usr/share/texlive/texmf-dist/tex/latex/kvsetkeys/kvsetkeys.sty) (/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty) (/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty (/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty) (/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty (/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty))) (/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty (/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty) (/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty (/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty))) (/usr/share/texlive/texmf-dist/tex/latex/etoolbox/etoolbox.sty) (/usr/share/texlive/texmf-dist/tex/generic/stringenc/stringenc.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) (/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/puenc.def) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty (/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty)) (/usr/share/texlive/texmf-dist/tex/latex/base/atbegshi-ltx.sty)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hdvips.def (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pdfmark.def (/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty (/usr/share/texlive/texmf-dist/tex/latex/base/atveryend-ltx.sty) (/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty)))) (./hyphenation.tex) (./extensions.tex) (/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-dvips.def) (./manual.aux) (./manual.out) (./manual.out) [1] Underfull \hbox (badness 10000) in paragraph at lines 43--50 Underfull \hbox (badness 10000) in paragraph at lines 43--50 Underfull \hbox (badness 10000) in paragraph at lines 43--50 \OT1/cmr/m/n/10 This man-ual is li-censed un-der the GNU Gen-eral Pub-lic Li-ce nse Underfull \hbox (badness 4279) in paragraph at lines 43--50 \OT1/cmr/m/n/10 ver-sion 2. More in-for-ma-tion about this li-cense can be foun d at [2] (./manual.toc [3] [4] [5] [6] [7] [8]) [9] [10] [11] [12] Chapter 1. (./commandline.tex [13] Overfull \hbox (9.08328pt too wide) in paragraph at lines 46--46 [] \OT1/cmtt/m/n/7 % Any relation to real weather is purely coincidental.[] Overfull \hbox (20.43309pt too wide) in paragraph at lines 39--54 [] Overfull \hbox (20.43309pt too wide) in paragraph at lines 56--70 [] Overfull \hbox (20.43309pt too wide) in paragraph at lines 72--87 [] Overfull \hbox (20.43309pt too wide) in paragraph at lines 89--104 [] Overfull \hbox (20.43309pt too wide) in paragraph at lines 106--120 [] Overfull \hbox (20.43309pt too wide) in paragraph at lines 122--141 [] Underfull \vbox (badness 1616) has occurred while \output is active [14] Overfull \hbox (16.8051pt too wide) in paragraph at lines 155--156 \OT1/cmtt/m/n/10 converters.CSVLoader\OT1/cmr/m/n/10 , which can be used to im- port C45 datasets and comma/tab- [15] Overfull \hbox (63.24817pt too wide) in paragraph at lines 166--167 \OT1/cmr/m/n/10 Any learn-ing al-go-rithm in WEKA is de-rived from the ab-strac t \OT1/cmtt/m/n/10 weka.classifiers.Classifier [16] [17] [18] Overfull \hbox (2.46945pt too wide) in paragraph at lines 375--376 []\OT1/cmtt/m/n/10 meta.ClassificationViaRegression -W functions.LinearRegressi on [19] Overfull \hbox (20.43309pt too wide) in paragraph at lines 391--418 [] Overfull \hbox (1.64569pt too wide) in paragraph at lines 427--427 [] \OT1/cmtt/m/n/7 Time taken to test model on training data: 0 seconds[] Overfull \hbox (20.43309pt too wide) in paragraph at lines 420--435 [] Overfull \hbox (5.36449pt too wide) in paragraph at lines 464--464 [] \OT1/cmtt/m/n/7 TP Rate FP Rate Precision Recall F-Measure Class[] Overfull \hbox (20.43309pt too wide) in paragraph at lines 437--472 [] Underfull \vbox (badness 10000) has occurred while \output is active [20] Overfull \hbox (1.64569pt too wide) in paragraph at lines 503--503 [] \OT1/cmtt/m/n/7 Correctly Classified Instances 9 64.2857 %[] Overfull \hbox (1.64569pt too wide) in paragraph at lines 503--503 [] \OT1/cmtt/m/n/7 Incorrectly Classified Instances 5 35.7143 %[] Overfull \hbox (5.36449pt too wide) in paragraph at lines 503--503 [] \OT1/cmtt/m/n/7 TP Rate FP Rate Precision Recall F-Measure Class[] Overfull \hbox (20.43309pt too wide) in paragraph at lines 474--511 [] [21] Overfull \hbox (0.61818pt too wide) in paragraph at lines 522--523 []\OT1/cmr/m/n/10 The \OT1/cmr/m/it/10 F-Measure \OT1/cmr/m/n/10 is sim-ply 2*P re-ci-sion*Recall/(Precision+Recall), a com-bined Overfull \hbox (17.81848pt too wide) in paragraph at lines 547--547 [] \OT1/cmtt/m/n/7 0 diaporthe-stem-canker 0.9999672587892333 diaporthe-stem-c anker[] Overfull \hbox (17.81848pt too wide) in paragraph at lines 547--547 [] \OT1/cmtt/m/n/7 1 diaporthe-stem-canker 0.9999992614503429 diaporthe-stem-c anker[] Overfull \hbox (14.09969pt too wide) in paragraph at lines 547--547 [] \OT1/cmtt/m/n/7 2 diaporthe-stem-canker 0.999998948559035 diaporthe-stem-ca nker[] Overfull \hbox (17.81848pt too wide) in paragraph at lines 547--547 [] \OT1/cmtt/m/n/7 3 diaporthe-stem-canker 0.9999998441238833 diaporthe-stem-c anker[] Overfull \hbox (17.81848pt too wide) in paragraph at lines 547--547 [] \OT1/cmtt/m/n/7 4 diaporthe-stem-canker 0.9999989997681132 diaporthe-stem-c anker[] Overfull \hbox (10.38089pt too wide) in paragraph at lines 547--547 [] \OT1/cmtt/m/n/7 5 rhizoctonia-root-rot 0.9999999395928124 rhizoctonia-root- rot[] Overfull \hbox (6.6621pt too wide) in paragraph at lines 547--547 [] \OT1/cmtt/m/n/7 6 rhizoctonia-root-rot 0.999998912860593 rhizoctonia-root-r ot[] Overfull \hbox (10.38089pt too wide) in paragraph at lines 547--547 [] \OT1/cmtt/m/n/7 7 rhizoctonia-root-rot 0.9999994386283236 rhizoctonia-root- rot[] Underfull \hbox (badness 1953) in paragraph at lines 551--552 \OT1/cmr/m/n/10 dicted class value, the con-fi- Overfull \hbox (48.88585pt too wide) in paragraph at lines 533--555 [] Overfull \hbox (48.88585pt too wide) in paragraph at lines 557--580 [] Overfull \hbox (26.73993pt too wide) in paragraph at lines 592--593 \OT1/cmr/m/n/10 Dividing by the num-ber of in-stances in the test set, i.e. \OT 1/cmtt/m/n/10 wc -l < soybean-test.preds [22] (./includes/learning_curves.tex Overfull \hbox (67.78633pt too wide) in paragraph at lines 21--21 [] \OT1/cmtt/m/n/7 java weka.filters.supervised.instance.StratifiedRemoveFol ds -N 4 -F 1 -S $run -c last -i ../$f -o $run/t_$f[] Overfull \hbox (78.94272pt too wide) in paragraph at lines 21--21 [] \OT1/cmtt/m/n/7 java weka.filters.supervised.instance.StratifiedRemoveFol ds -N 4 -F 1 -S $run -V -c last -i ../$f -o $run/t0$f[] Overfull \hbox (38.03596pt too wide) in paragraph at lines 21--21 [] \OT1/cmtt/m/n/7 java weka.filters.supervised.instance.Resample -S 0 -Z 83 -c last -i $run/t$nr$f -o $run/t$nrp1$f[] [23]) Overfull \hbox (82.66151pt too wide) in paragraph at lines 663--663 [] \OT1/cmtt/m/n/7 -M "weka.classifiers.meta.ClassificationViaRegression -W weka.classifiers.functions.LinearRegression -- -S 1" \[] ) [24] [25] [26] Chapter 2. (./launching.tex [27] Overfull \hbox (9.861pt too wide) in paragraph at lines 86--87 []\OT1/cmr/bx/n/10 Weka on Source-forge \OT1/cmr/m/n/10 WEKA's project home-pag e on Source-forge.net. [28]) [29] [30] Chapter 3. (./simplecli.tex [31] [32] Overfull \hbox (67.06445pt too wide) in paragraph at lines 92--94 \OT1/cmr/m/n/10 with a dot (Unix/Linux: \OT1/cmtt/m/n/10 ./some/other/path/file \OT1/cmr/m/n/10 ; Win-dows: .$\OMS/cmsy/m/n/10 n$\OT1/cmr/m/n/10 Some$\OMS/cmsy /m/n/10 n$\OT1/cmr/m/n/10 Other$\OMS/cmsy/m/n/10 n$\OT1/cmr/m/n/10 Path$\OMS/cm sy/m/n/10 n$\OT1/cmr/m/n/10 file). ) [33] [34] Chapter 4. (./explorer.tex [35] [36] [37] [38] [39] Underfull \hbox (badness 10000) in paragraph at lines 298--308 [40] [41] [42] [43] [44] [45] [46] [47] [48] Underfull \hbox (badness 10000) in paragraph at lines 657--666 [49] [50]) [51] [52] Chapter 5. (./experimenter.tex [53] [54] Underfull \vbox (badness 1082) has occurred while \output is active [55] [56] [57] [58] [59] Underfull \vbox (badness 10000) has occurred while \output is active [60] [61] [62] Underfull \vbox (badness 7704) has occurred while \output is active [63] [64] [65] Underfull \vbox (badness 10000) has occurred while \output is active [66] Overfull \hbox (74.99634pt too wide) in paragraph at lines 409--409 [] \OT1/cmtt/m/n/10 @attribute Key_Scheme {weka.classifiers.rules.ZeroR,weka.cl assifiers.trees.J48}[] Overfull \hbox (38.24666pt too wide) in paragraph at lines 409--409 [] \OT1/cmtt/m/n/10 @attribute Key_Scheme_version_ID {48055541465867954,-217733 168393644444}[] [67] Overfull \hbox (1.49698pt too wide) in paragraph at lines 409--409 [] \OT1/cmtt/m/n/10 @attribute Summary {'Number of leaves: 3\nSize of the tree: 5\n',[] Overfull \hbox (48.74657pt too wide) in paragraph at lines 409--409 [] \OT1/cmtt/m/n/10 iris,1,weka.classifiers.rules.ZeroR,,48055541465867954,2005 1221.033,99,51,[] Overfull \hbox (69.74638pt too wide) in paragraph at lines 409--409 [] \OT1/cmtt/m/n/10 17,34,0,33.333333,66.666667,0,0,0.444444,0.471405,100,100,8 0.833088,80.833088,[] Overfull \hbox (59.24648pt too wide) in paragraph at lines 409--409 [] \OT1/cmtt/m/n/10 0,1.584963,1.584963,0,0,0,0,1,17,1,34,0,0,0,0,0.333333,1,0. 5,0.5,0,0,?,?,?,?[] [68] [69] Underfull \vbox (badness 10000) has occurred while \output is active [70] Underfull \vbox (badness 10000) has occurred while \output is active [71] [72] [73] Overfull \hbox (38.24666pt too wide) in paragraph at lines 536--536 []\OT1/cmtt/m/n/10 ClassifierSplitEvaluator: weka.classifiers.trees.J48 -C 0.25 -M 2(version[] Overfull \hbox (1.49698pt too wide) in paragraph at lines 536--536 []\OT1/cmtt/m/n/10 Correctly Classified Instances 47 92. 1569 %[] Overfull \hbox (1.49698pt too wide) in paragraph at lines 536--536 []\OT1/cmtt/m/n/10 Incorrectly Classified Instances 4 7. 8431 %[] [74] [75] [76] Overfull \hbox (0.2135pt too wide) in paragraph at lines 584--585 []\OT1/cmr/m/n/10 As with the other Re-sult-Pro-duc-ers, ad-di-tional schemes c an be de-fined. When Underfull \vbox (badness 10000) has occurred while \output is active [77] Underfull \vbox (badness 10000) has occurred while \output is active [78] [79] Underfull \hbox (badness 10000) in paragraph at lines 605--610 Overfull \hbox (34.37631pt too wide) in paragraph at lines 613--614 [] [80] [81] Overfull \hbox (8.24261pt too wide) in paragraph at lines 656--657 [] [82] Overfull \hbox (17.30408pt too wide) in paragraph at lines 686--687 []\OT1/cmr/m/n/10 Additional jar archives, i.e., JDBC drivers, are stored in \O T1/cmtt/m/n/10 /home/johndoe/jars\OT1/cmr/m/n/10 . [83] Overfull \hbox (12.8892pt too wide) in paragraph at lines 737--738 []\OT1/cmr/m/n/10 Create a script, called \OT1/cmtt/m/n/10 /home/johndoe/remote []engine/startRemoteEngine\OT1/cmr/m/n/10 , Overfull \hbox (22.24724pt too wide) in paragraph at lines 745--745 [] \OT1/cmtt/m/n/10 -classpath /home/johndoe/jars/hsqldb.jar:remoteEngine.jar \[] Overfull \hbox (16.99728pt too wide) in paragraph at lines 753--753 [] \OT1/cmtt/m/n/10 -classpath /home/johndoe/jars/mysql.jar:remoteEngine.jar \[] [84] Overfull \hbox (75.70413pt too wide) in paragraph at lines 778--779 []\OT1/cmr/m/n/10 Edit this file and change the "\OT1/cmtt/m/n/9 jdbcURL=jdbc:h sqldb:hsql://server[]name/database[]name\OT1/cmr/m/n/9 " Overfull \hbox (11.41405pt too wide) in paragraph at lines 778--779 \OT1/cmr/m/n/9 server (e.g., \OT1/cmtt/m/n/9 jdbcURL=jdbc:hsqldb:hsql://dodo.co mpany.com/experiment\OT1/cmr/m/n/9 ). 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(./knowledgeflow.tex [95] [96] [97] [98] Overfull \hbox (36.43697pt too wide) in paragraph at lines 133--135 []\OT1/cmr/m/it/10 ClassifierPerformanceEvaluator \OT1/cmr/m/n/10 - eval-u-ate the per-for-mance of batch trained/tested Overfull \hbox (35.54247pt too wide) in paragraph at lines 137--139 []\OT1/cmr/m/it/10 ClustererPerformanceEvaluator \OT1/cmr/m/n/10 - eval-u-ate t he per-for-mance of batch trained/tested [99] [100] [101] [102] Overfull \hbox (11.53027pt too wide) in paragraph at lines 268--269 [] [103] [104] Overfull \hbox (24.88557pt too wide) in paragraph at lines 359--360 [] [105] [106] Overfull \hbox (1.07347pt too wide) in paragraph at lines 435--453 \OT1/cmr/m/n/10 mech-a-nism. 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(./arffviewer.tex [109] [110] [111] [112] ) [113] [114] Chapter 8. (./bayesnet.tex [115] [116] Underfull \vbox (badness 2103) has occurred while \output is active [117] Overfull \hbox (13.24905pt too wide) in paragraph at lines 180--185 \OT1/cmr/m/n/10 fer-ent from the ADTree clas-si-fier al-go-rithm from \OT1/cmtt /m/n/10 weka.classifiers.tree.ADTree\OT1/cmr/m/n/10 . [118] [119] [120] Underfull \hbox (badness 10000) in paragraph at lines 331--336 [121] Underfull \hbox (badness 10000) in paragraph at lines 352--356 Underfull \hbox (badness 10000) in paragraph at lines 361--376 [122] Overfull \hbox (38.44424pt too wide) has occurred while \output is active \OT1/cmr/m/sl/10 8.3. CONDITIONAL INDEPENDENCE TEST BASED STRUCTURE LEARNING \ OT1/cmr/m/n/10 123 [123] Overfull \hbox (106.49606pt too wide) in paragraph at lines 426--426 [] \OT1/cmtt/m/n/10 Rule 5: if no edges are directed then take a rand om one (first we can find)[] Underfull \hbox (badness 10000) in paragraph at lines 434--442 [124] Underfull \vbox (badness 1867) has occurred while \output is active [125] [126] [127] Overfull \hbox (28.27066pt too wide) in paragraph at lines 597--597 [] \OT1/cmtt/m/n/9 Sets test file. If missing, a cross-validation will b e performed on the[] [128] Overfull \hbox (14.09583pt too wide) in paragraph at lines 597--597 [] \OT1/cmtt/m/n/9 Retrieves the options from the XML-data instead of th e command line.[] [129] Overfull \hbox (57.99673pt too wide) in paragraph at lines 644--644 [] \OT1/cmtt/m/n/10 Use tournament selection (true) or maximum subpopul atin (false).[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 644--644 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 644--644 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 644--644 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 661--661 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 661--661 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 661--661 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 678--678 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 678--678 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 678--678 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] [130] Overfull \hbox (42.24687pt too wide) in paragraph at lines 699--699 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 699--699 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 699--699 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 720--720 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 720--720 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 720--720 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] [131] Overfull \hbox (42.24687pt too wide) in paragraph at lines 738--738 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 738--738 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 738--738 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 764--764 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 764--764 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 764--764 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 774--774 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 774--774 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 774--774 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] [132] Overfull \hbox (42.24687pt too wide) in paragraph at lines 784--784 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 784--784 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 784--784 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 799--799 [] \OT1/cmtt/m/n/10 When determining whether an edge exists a search is performed[] Overfull \hbox (52.74678pt too wide) in paragraph at lines 799--799 [] \OT1/cmtt/m/n/10 for a set Z that separates the nodes. MaxCardinalit y determines[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 799--799 [] \OT1/cmtt/m/n/10 the maximum size of the set Z. This greatly influen ces the[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 799--799 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 799--799 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 799--799 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] Overfull \hbox (57.99673pt too wide) in paragraph at lines 829--829 [] \OT1/cmtt/m/n/10 Use tournament selection (true) or maximum subpopul atin (false).[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 829--829 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] [133] Overfull \hbox (31.74696pt too wide) in paragraph at lines 829--829 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 829--829 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 849--849 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 849--849 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 849--849 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 869--869 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 869--869 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 869--869 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] [134] Overfull \hbox (42.24687pt too wide) in paragraph at lines 893--893 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 893--893 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 893--893 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 914--914 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 914--914 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 914--914 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] [135] Overfull \hbox (42.24687pt too wide) in paragraph at lines 943--943 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 943--943 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 943--943 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 956--956 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 956--956 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 956--956 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] Overfull \hbox (10.74715pt too wide) in paragraph at lines 961--961 [] \OT1/cmtt/m/n/10 Name of file containing network structure in BIF fo rmat[] [136] [137] Overfull \hbox (641.9914pt too wide) in paragraph at lines 1043--1043 []\OT1/cmtt/m/n/10 Scheme: weka.classifiers.bayes.BayesNet -D -B iris.xml -Q weka.classifiers.bayes.net.search.local.K2 -- -P 2 -S BAYES -E weka.classif iers.bayes.net.estimate.SimpleEstimator -- -A 0.5[] Overfull \hbox (106.49606pt too wide) in paragraph at lines 1061--1061 []\OT1/cmtt/m/n/10 Relation: iris-weka.filters.unsupervised.attribute.Discr etize-B2-M-1.0-Rfirst-last[] [138] Overfull \hbox (1.49698pt too wide) in paragraph at lines 1123--1123 []\OT1/cmtt/m/n/10 Correctly Classified Instances 116 77. 3333 %[] Overfull \hbox (1.49698pt too wide) in paragraph at lines 1123--1123 []\OT1/cmtt/m/n/10 Incorrectly Classified Instances 34 22. 6667 %[] [139] [140] Underfull \hbox (badness 10000) in paragraph at lines 1181--1191 [141] Overfull \hbox (109.99007pt too wide) in paragraph at lines 1199--1200 [] Underfull \vbox (badness 4569) has occurred while \output is active [142] Overfull \hbox (31.52597pt too wide) in paragraph at lines 1232--1244 \OT1/cmr/m/n/10 vari-ables are dis-cretized us-ing the \OT1/cmtt/m/n/10 weka.fi lters.supervised.attribute.Discretize Underfull \vbox (badness 10000) has occurred while \output is active [143] [144] Underfull \hbox (badness 10000) in paragraph at lines 1298--1308 Overfull \hbox (5.15332pt too wide) in paragraph at lines 1316--1319 []\OT1/cmr/m/n/10 The Gen-er-ate Net-work menu al-lows gen-er-a-tion of a com-p lete ran-dom Bayesian [145] [146] Overfull \hbox (17.96149pt too wide) in paragraph at lines 1375--1376 [] Underfull \vbox (badness 10000) has occurred while \output is active [147] Overfull \hbox (11.45515pt too wide) in paragraph at lines 1409--1410 [] [148] [149] [150] Underfull \vbox (badness 1675) has occurred while \output is active [151] [152] [153] Overfull \hbox (76.10909pt too wide) in paragraph at lines 1570--1576 []\OT1/cmr/m/n/10 Create a class that de-rives from \OT1/cmtt/m/n/10 weka.class ifiers.bayes.net.search.SearchAlgorithm\OT1/cmr/m/n/10 . Overfull \hbox (6.74959pt too wide) in paragraph at lines 1570--1576 \OT1/cmr/m/n/10 validation based, you prob-a-bly want to de-rive from \OT1/cmtt /m/n/10 ScoreSearchAlgorithm\OT1/cmr/m/n/10 , Overfull \hbox (56.55356pt too wide) in paragraph at lines 1570--1576 \OT1/cmtt/m/n/10 CISearchAlgorithm \OT1/cmr/m/n/10 or \OT1/cmtt/m/n/10 CVSearch Algorithm \OT1/cmr/m/n/10 in-stead of de-riv-ing from \OT1/cmtt/m/n/10 SearchAl gorithm Overfull \hbox (29.2748pt too wide) in paragraph at lines 1577--1582 \OT1/cmtt/m/n/10 public void buildStructure(BayesNet bayesNet, Instances instan ces)\OT1/cmr/m/n/10 . Overfull \hbox (6.05424pt too wide) in paragraph at lines 1577--1582 \OT1/cmr/m/n/10 You can ac-cess the par-entsets us-ing \OT1/cmtt/m/n/10 bayesNe t.getParentSet(iAttribute) Overfull \hbox (10.74715pt too wide) in paragraph at lines 1583--1587 \OT1/cmtt/m/n/10 bayesNet.getParentSet(iAttribute).AddParent(iParent, instances ) Overfull \hbox (36.44255pt too wide) in paragraph at lines 1588--1596 []\OT1/cmr/m/n/10 Alternatively, im-ple-ment \OT1/cmtt/m/n/10 public void searc h(BayesNet bayesNet, Instances Overfull \hbox (2.57175pt too wide) in paragraph at lines 1617--1621 \OT1/cmtt/m/n/10 weka.classifiers.bayes.net.estimate.BayesNetEstimator\OT1/cmr/ m/n/10 . Let's say Overfull \hbox (29.2748pt too wide) in paragraph at lines 1622--1627 \OT1/cmtt/m/n/10 public void updateClassifier(BayesNet bayesNet, Instance insta nce)\OT1/cmr/m/n/10 , Overfull \hbox (31.74696pt too wide) in paragraph at lines 1622--1627 \OT1/cmtt/m/n/10 public double[] distributionForInstance(BayesNet bayesNet, Ins tance [154] Overfull \hbox (7.02576pt too wide) in paragraph at lines 1644--1648 \OT1/cmr/m/n/10 Use the class \OT1/cmtt/m/n/10 weka.filters.unsupervised.attrib ute.Discretize \OT1/cmr/m/n/10 to dis-cretize Overfull \hbox (27.74675pt too wide) in paragraph at lines 1644--1648 \OT1/cmtt/m/n/10 java weka.filters.unsupervised.attribute.Discretize -B 3 -i in file.arff Overfull \hbox (1.49698pt too wide) in paragraph at lines 1655--1659 \OT1/cmtt/m/n/10 java weka.classifiers.bayes.net.BayesNetGenerator -B -N 10 -A 9 -C Overfull \hbox (1.49698pt too wide) in paragraph at lines 1661--1665 \OT1/cmtt/m/n/10 java weka.classifiers.bayes.net.BayesNetGenerator -N 15 -A 20 -C 3 Overfull \hbox (22.4968pt too wide) in paragraph at lines 1667--1671 \OT1/cmtt/m/n/10 java weka.classifiers.bayes.net.BayesNetGenerator -F alarm.xml -M 1000 [155] [156] Overfull \hbox (5.66734pt too wide) in paragraph at lines 1731--1735 []\OT1/cmr/m/n/10 Only leave-one-out, k-fold and cu-mu-la-tive cross-validation are im-ple-mented. Overfull \hbox (8.08392pt too wide) in paragraph at lines 1731--1735 \OT1/cmr/m/n/10 These im-ple-men-ta-tions can be made more ef-fi-cient and othe r cross-validation ) [157] [158] [159] [160] Chapter 9. (./arff.tex Overfull \hbox (6.74693pt too wide) in paragraph at lines 41--41 [] \OT1/cmtt/m/n/10 % (b) Donor: Michael Marshall (MARSHALL%PLU@io.arc.na sa.gov)[] Overfull \hbox (22.4968pt too wide) in paragraph at lines 41--41 [] \OT1/cmtt/m/n/10 @ATTRIBUTE class {Iris-setosa,Iris-versicolor,Iris- virginica}[] [161] (/usr/share/texlive/texmf-dist/tex/latex/base/ts1cmtt.fd) [162] Overfull \hbox (2.27603pt too wide) in paragraph at lines 116--117 \OT1/cmr/m/n/10 pos-si-ble val-ues: $\OML/cmm/m/it/10 <$\OT1/cmtt/m/n/10 nomina l-name1$\OML/cmm/m/it/10 >$\OT1/cmtt/m/n/10 , $\OML/cmm/m/it/10 <$\OT1/cmtt/m/n /10 nominal-name2$\OML/cmm/m/it/10 >$\OT1/cmtt/m/n/10 , $\OML/cmm/m/it/10 <$\OT 1/cmtt/m/n/10 nominal-name3$\OML/cmm/m/it/10 >$\OT1/cmtt/m/n/10 , [163] [164] [165]) [166] Chapter 10. (./xrff.tex [167] Overfull \hbox (80.24629pt too wide) in paragraph at lines 127--127 [] \OT1/cmtt/m/n/10 [] [168] [169] [170]) [171] [172] Chapter 11. (./converters.tex [173] Overfull \hbox (0.24724pt too wide) in paragraph at lines 60--60 [] \OT1/cmtt/m/n/10 java weka.core.converters.CSVLoader iris.csv > iris.ar ff[] Overfull \hbox (15.9971pt too wide) in paragraph at lines 70--70 [] \OT1/cmtt/m/n/10 java weka.core.converters.CSVSaver -i iris.arff -o iri s.csv[] [174] Overfull \hbox (57.99673pt too wide) in paragraph at lines 99--99 [] \OT1/cmtt/m/n/10 java weka.core.converters.DatabaseLoader -Q "select * f rom employee"[] Overfull \hbox (21.24706pt too wide) in paragraph at lines 104--104 [] \OT1/cmtt/m/n/10 java weka.core.converters.DatabaseSaver -i iris.arff - T iris[] ) [175] [176] Chapter 12. (./stemmers.tex Overfull \hbox (68.33246pt too wide) in paragraph at lines 29--30 \OT1/cmr/m/n/10 Weka con-tains a wrap-per class for the Snow-ball (home-page: [ ][][][]) [177] Overfull \hbox (46.33209pt too wide) in paragraph at lines 49--50 []\OT1/cmr/m/n/10 within the String-ToWord-Vec-tor (pack-age \OT1/cmtt/m/n/10 w eka.filters.unsupervised.attribute\OT1/cmr/m/n/10 ) Overfull \hbox (4.85867pt too wide) in paragraph at lines 73--74 \OT1/cmr/m/n/10 the \OT1/cmtt/m/n/10 GenericObjectEditor.props\OT1/cmr/m/n/10 / \OT1/cmtt/m/n/10 GenericPropertiesCreator.props \OT1/cmr/m/n/10 file ) [178] Chapter 13. (./databases.tex Overfull \hbox (9.77429pt too wide) in paragraph at lines 37--38 []\OT1/cmtt/m/n/10 DatabaseUtils.props.mssqlserver2005 \OT1/cmr/m/n/10 - MS SQL Server 2005 ($\OML/cmm/m/it/10 >\OT1/cmr/m/n/10 =$3.4.11, Overfull \hbox (9.10817pt too wide) in paragraph at lines 39--41 []\OT1/cmtt/m/n/10 DatabaseUtils.props.odbc \OT1/cmr/m/n/10 - ODBC ac-cess via Sun's ODBC/JDBC bridge, Underfull \hbox (badness 10000) in paragraph at lines 46--47 Underfull \hbox (badness 10000) in paragraph at lines 48--49 [179] [180] Overfull \hbox (89.10794pt too wide) in paragraph at lines 103--108 \OT1/cmtt/m/n/10 jdbc:postgresql://server.my.domain:5432/MyDatabase?user=$\OML/ cmm/m/it/10 <$\OT1/cmtt/m/n/10 ...$\OML/cmm/m/it/10 >$\OT1/cmtt/m/n/10 &passwor d=$\OML/cmm/m/it/10 <$\OT1/cmtt/m/n/10 ...$\OML/cmm/m/it/10 >$ Underfull \vbox (badness 3679) has occurred while \output is active [181] [182] Overfull \hbox (27.9972pt too wide) in paragraph at lines 183--185 [][][][] Overfull \hbox (0.8047pt too wide) in paragraph at lines 201--202 \OT1/cmr/m/n/10 com-mand \OT1/cmtt/m/n/10 java weka.core.SystemInfo \OT1/cmr/m/ n/10 and check whether the prop- [183]) [184] Chapter 14. (./windows_databases.tex [185] [186]) [187] [188] [189] [190] Chapter 15. (./research.tex Overfull \hbox (31.02701pt too wide) in paragraph at lines 32--33 \OT1/cmr/m/n/10 ter-face it is now easy to ex-tract all the pa-per ref-er-ences via \OT1/cmtt/m/n/10 weka.core.ClassDiscovery [191] (./includes/get_wekatechinfo.tex [192] Overfull \hbox (90.0991pt too wide) in paragraph at lines 124--124 []\OT1/cmtt/m/n/7 TECHINFOHANDLERS=`$JAVA weka.core.ClassDiscovery $TECHINFOHAN DLER $PACKAGES | grep "\. weka" | sed s/".*weka"/weka/g`[] )) [193] [194] Chapter 16. (./using_api.tex Underfull \hbox (badness 10000) in paragraph at lines 35--40 [195] Overfull \hbox (3.8326pt too wide) in paragraph at lines 104--113 \OT1/cmr/m/n/10 support-vector ma-chine clas-si-fier \OT1/cmr/m/it/10 SMO \OT1/ cmr/m/n/10 (pack-age \OT1/cmtt/m/n/10 weka.classifiers.functions\OT1/cmr/m/n/10 ) [196] Overfull \hbox (8.05441pt too wide) in paragraph at lines 125--130 \OT1/cmr/m/n/10 method, it is best to have a look at the \OT1/cmtt/m/n/10 setOp tions(String[]) \OT1/cmr/m/n/10 and \OT1/cmtt/m/n/10 getOptions() Overfull \hbox (6.08145pt too wide) in paragraph at lines 140--148 []\OT1/cmr/m/n/10 A \OT1/cmtt/m/n/10 SelectedTag \OT1/cmr/m/n/10 gets con-struc ted us-ing the ar-ray of all pos-si-ble \OT1/cmtt/m/n/10 weka.core.Tag Overfull \hbox (11.99689pt too wide) in paragraph at lines 156--156 [] \OT1/cmtt/m/n/10 setEvaluation(new SelectedTag(EVALUATION_CC, TAGS_EVALU ATION));[] [197] Overfull \hbox (1.93398pt too wide) in paragraph at lines 178--183 \OT1/cmr/m/n/10 the \OT1/cmtt/m/n/10 attribute(int) \OT1/cmr/m/n/10 method. Thi s method re-turns \OT1/cmtt/m/n/10 weka.core.Attribute Overfull \hbox (27.33139pt too wide) in paragraph at lines 203--206 []\OT1/cmr/m/n/10 The \OT1/cmtt/m/n/10 DataSource \OT1/cmr/m/n/10 class (in-ner class of the \OT1/cmtt/m/n/10 weka.core.converters.ConverterUtils [198] Underfull \hbox (badness 10000) in paragraph at lines 246--249 Overfull \hbox (3.25064pt too wide) in paragraph at lines 299--301 \OT1/cmr/m/n/10 loaded into mem-ory and then pro-vided row-by-row (``pseudo-inc remental''). [199] [200] Overfull \hbox (21.26906pt too wide) in paragraph at lines 318--321 \OT1/cmr/m/n/10 The class \OT1/cmtt/m/n/10 wekaexamples.core.CreateInstances \O T1/cmr/m/n/10 of the \OT1/cmr/m/it/10 Weka Ex-am-ples \OT1/cmr/m/n/10 collectio n[[]] Overfull \hbox (41.44293pt too wide) in paragraph at lines 332--335 \OT1/cmr/m/n/10 For all of the dif-fer-ent at-tribute types, WEKA uses the same class, \OT1/cmtt/m/n/10 weka.core.Attribute\OT1/cmr/m/n/10 , Overfull \hbox (10.74715pt too wide) in paragraph at lines 351--351 [] \OT1/cmtt/m/n/10 Attribute date = new Attribute("name_of_attr", "yyyy-MM-d d");[] Overfull \hbox (47.49683pt too wide) in paragraph at lines 372--372 [] \OT1/cmtt/m/n/10 Attribute string = new Attribute("name_of_attr", (FastVec tor) null);[] Underfull \vbox (badness 10000) has occurred while \output is active [201] Overfull \vbox (76.493pt too high) has occurred while \output is active [202] Overfull \hbox (31.74696pt too wide) in paragraph at lines 390--390 [] \OT1/cmtt/m/n/10 Attribute relational = new Attribute("name_of_attr", rel_ struct);[] Overfull \hbox (11.99689pt too wide) in paragraph at lines 408--408 [] \OT1/cmtt/m/n/10 Instances dataset = new Instances("Test-dataset", attribu tes, 0);[] Overfull \hbox (9.12917pt too wide) in paragraph at lines 418--421 \OT1/cmr/m/n/10 to it, row by row. There are ba-si-cally two con-struc-tors of the \OT1/cmtt/m/n/10 weka.core.Instance Overfull \hbox (12.8311pt too wide) in paragraph at lines 422--426 []\OT1/cmtt/m/n/10 Instance(double weight, double[] attValues) \OT1/cmr/m/n/10 -- gen-er-ates an \OT1/cmtt/m/n/10 Instance Overfull \vbox (46.59024pt too high) has occurred while \output is active [203] Overfull \hbox (26.49701pt too wide) in paragraph at lines 468--468 [] \OT1/cmtt/m/n/10 values[3] = data.attribute(3).addStringValue("This is a st ring");[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 480--480 [] \OT1/cmtt/m/n/10 Instances dataRel = new Instances(data.attribute(4).relati on(),0);[] [204] Overfull \hbox (24.165pt too wide) in paragraph at lines 501--504 \OT1/cmr/m/n/10 Simply gen-er-at-ing an ARFF file is achieved us-ing the static \OT1/cmtt/m/n/10 DataGenerator.makeData Overfull \hbox (28.96251pt too wide) in paragraph at lines 501--504 \OT1/cmr/m/n/10 method. In or-der to write to a file, the gen-er-a-tor needs to have a \OT1/cmtt/m/n/10 java.io.PrintWriter Overfull \hbox (6.74693pt too wide) in paragraph at lines 520--520 [] \OT1/cmtt/m/n/10 new java.io.BufferedWriter(new java.io.FileWriter("rdg1.ar ff")));[] [205] Overfull \hbox (20.5538pt too wide) in paragraph at lines 567--570 []\OT1/cmr/m/n/10 Using the \OT1/cmtt/m/n/10 Randomize \OT1/cmr/m/n/10 fil-ter (pack-age \OT1/cmtt/m/n/10 weka.filters.unsupervised.instance\OT1/cmr/m/n/10 ). [206] [207] Overfull \hbox (22.4968pt too wide) in paragraph at lines 671--671 [] \OT1/cmtt/m/n/10 remove.setInputFormat(data); // inform filter abo ut dataset[] Overfull \hbox (11.99689pt too wide) in paragraph at lines 671--671 [] \OT1/cmtt/m/n/10 // **AFTER** setting options[] Overfull \hbox (22.4968pt too wide) in paragraph at lines 671--671 [] \OT1/cmtt/m/n/10 Instances newData = Filter.useFilter(data, remove); // ap ply filter[] Overfull \hbox (18.08133pt too wide) in paragraph at lines 672--677 \OT1/cmr/m/n/10 A com-mon trap to fall into is set-ting op-tions \OT1/cmr/bx/n/ 10 af-ter \OT1/cmr/m/n/10 the \OT1/cmtt/m/n/10 setInputFormat(Instances) Overfull \hbox (5.97029pt too wide) in paragraph at lines 689--693 \OT1/cmr/m/n/10 with the \OT1/cmtt/m/n/10 Standardize \OT1/cmr/m/n/10 fil-ter ( pack-age \OT1/cmtt/m/n/10 weka.filters.unsupervised.attribute\OT1/cmr/m/n/10 ): [208] Overfull \hbox (17.5531pt too wide) in paragraph at lines 710--721 \OT1/cmr/m/n/10 like \OT1/cmtt/m/n/10 FilteredClassifier \OT1/cmr/m/n/10 (pack- age \OT1/cmtt/m/n/10 weka.classifiers.meta\OT1/cmr/m/n/10 ), \OT1/cmtt/m/n/10 F ilteredClusterer Overfull \hbox (12.72011pt too wide) in paragraph at lines 710--721 \OT1/cmr/m/n/10 (pack-age \OT1/cmtt/m/n/10 weka.clusterers\OT1/cmr/m/n/10 ), \O T1/cmtt/m/n/10 FilteredAssociator \OT1/cmr/m/n/10 (pack-age \OT1/cmtt/m/n/10 we ka.associations\OT1/cmr/m/n/10 ) Overfull \hbox (27.16393pt too wide) in paragraph at lines 710--721 \OT1/cmr/m/n/10 and \OT1/cmtt/m/n/10 FilteredAttributeEval\OT1/cmr/m/n/10 /\OT1 /cmtt/m/n/10 FilteredSubsetEval \OT1/cmr/m/n/10 (in \OT1/cmtt/m/n/10 weka.attri buteSelection\OT1/cmr/m/n/10 ). [209] Overfull \hbox (20.1095pt too wide) in paragraph at lines 817--824 \OT1/cmr/m/n/10 All in-cre-men-tal clas-si-fiers in WEKA im-ple-ment the in-ter -face \OT1/cmtt/m/n/10 UpdateableClassifier Overfull \hbox (5.91695pt too wide) in paragraph at lines 831--833 []\OT1/cmr/m/it/10 update \OT1/cmr/m/n/10 the model row-by-row, by call-ing the \OT1/cmtt/m/n/10 updateClassifier(Instance) [210] [211] Overfull \hbox (21.05566pt too wide) in paragraph at lines 872--874 \OT1/cmr/m/n/10 The eval-u-a-tion step, in-clud-ing col-lec-tion of statis-tics , is per-formed by the \OT1/cmtt/m/n/10 Evaluation [212] Overfull \hbox (11.99689pt too wide) in paragraph at lines 910--910 [] \OT1/cmtt/m/n/10 System.out.println(eval.toSummaryString("\nResults\n\n", false));[] Overfull \hbox (11.99689pt too wide) in paragraph at lines 940--940 [] \OT1/cmtt/m/n/10 System.out.println(eval.toSummaryString("\nResults\n\n", false));[] [213] Overfull \hbox (11.55396pt too wide) in paragraph at lines 950--952 []\OT1/cmtt/m/n/10 toClassDetailsString \OT1/cmr/m/n/10 -- out-puts TP/FP rates , pre-ci-sion, re-call, F-measure, Overfull \hbox (0.47084pt too wide) in paragraph at lines 952--954 []\OT1/cmtt/m/n/10 toCumulativeMarginDistributionString \OT1/cmr/m/n/10 -- out- puts the cu-mu-la-tive mar- [214] Overfull \hbox (27.74675pt too wide) in paragraph at lines 1017--1017 [] \OT1/cmtt/m/n/10 Instances unlabeled = DataSource.read("/some/where/unlabe led.arff");[] Overfull \hbox (11.99689pt too wide) in paragraph at lines 1017--1017 [] \OT1/cmtt/m/n/10 double clsLabel = tree.classifyInstance(unlabeled.insta nce(i));[] Overfull \hbox (6.74693pt too wide) in paragraph at lines 1048--1048 [] \OT1/cmtt/m/n/10 double[] dist = cls.distributionForInstance(test.instan ce(i));[] Overfull \hbox (53.99652pt too wide) in paragraph at lines 1048--1048 [] \OT1/cmtt/m/n/10 System.out.print(test.instance(i).toString(test.classIn dex()) + " - ");[] Overfull \hbox (27.74675pt too wide) in paragraph at lines 1048--1048 [] \OT1/cmtt/m/n/10 System.out.print(test.classAttribute().value((int) pred ) + " - ");[] [215] Overfull \hbox (12.30984pt too wide) in paragraph at lines 1083--1087 []\OT1/cmr/m/it/10 build the model \OT1/cmr/m/n/10 with train-ing data -- call- ing the \OT1/cmtt/m/n/10 buildClusterer(Instances) Overfull \hbox (0.94284pt too wide) in paragraph at lines 1104--1108 \OT1/cmr/m/n/10 Incremental clus-ter-ers in WEKA im-ple-ment the in-ter-face \O T1/cmtt/m/n/10 UpdateableClusterer Overfull \hbox (13.7781pt too wide) in paragraph at lines 1112--1114 []\OT1/cmr/m/it/10 update \OT1/cmr/m/n/10 the model row-by-row by call-ing the the \OT1/cmtt/m/n/10 updateClusterer(Instance) Underfull \vbox (badness 10000) has occurred while \output is active [216] Overfull \vbox (79.67348pt too high) has occurred while \output is active [217] [218] Overfull \hbox (59.24648pt too wide) in paragraph at lines 1160--1160 [] \OT1/cmtt/m/n/10 System.out.println(ClusterEvaluation.evaluateClusterer(new EM(), options));[] Overfull \hbox (53.99652pt too wide) in paragraph at lines 1195--1195 [] \OT1/cmtt/m/n/10 DensityBasedClusterer clusterer = new ... // the clust erer to evaluate[] Overfull \hbox (64.49643pt too wide) in paragraph at lines 1195--1195 [] \OT1/cmtt/m/n/10 new Random(1)); // and rando m number generator[] [219] Overfull \hbox (0.24724pt too wide) in paragraph at lines 1222--1222 [] \OT1/cmtt/m/n/10 filter.setAttributeIndices("" + (data.classIndex() + 1) );[] Overfull \hbox (0.24724pt too wide) in paragraph at lines 1222--1222 [] \OT1/cmtt/m/n/10 Instances dataClusterer = Filter.useFilter(data, filter );[] [220] Overfull \hbox (3.69315pt too wide) in paragraph at lines 1247--1249 []\OT1/cmtt/m/n/10 clusterInstance(Instance) \OT1/cmr/m/n/10 -- de-ter-mines th e clus-ter the \OT1/cmtt/m/n/10 Instance \OT1/cmr/m/n/10 would Overfull \hbox (6.74693pt too wide) in paragraph at lines 1276--1276 [] \OT1/cmtt/m/n/10 int cluster = clusterer.clusterInstance(dataset2.instan ce(i));[] Overfull \hbox (59.24648pt too wide) in paragraph at lines 1276--1276 [] \OT1/cmtt/m/n/10 double[] dist = clusterer.distributionForInstance(datas et2.instance(i));[] [221] Underfull \hbox (badness 10000) in paragraph at lines 1285--1290 Overfull \hbox (3.35565pt too wide) in paragraph at lines 1293--1298 []\OT1/cmr/m/it/10 single at-tribute eval-u-a-tors \OT1/cmr/m/n/10 -- per-form eval-u-a-tions on sin-gle at-tributes. These [222] Overfull \hbox (64.49643pt too wide) in paragraph at lines 1378--1378 [] \OT1/cmtt/m/n/10 AttributeSelectedClassifier classifier = new AttributeSel ectedClassifier();[] Overfull \hbox (22.4968pt too wide) in paragraph at lines 1378--1378 [] \OT1/cmtt/m/n/10 evaluation.crossValidateModel(classifier, data, 10, new R andom(1));[] [223] Overfull \hbox (27.4348pt too wide) in paragraph at lines 1383--1388 \OT1/cmr/m/n/10 train-ing a clas-si-fier, then the fil-ter ap-proach is the rig ht one. The \OT1/cmtt/m/n/10 AttributeSelection [224] [225] Overfull \hbox (50.86061pt too wide) in paragraph at lines 1465--1470 \OT1/cmr/m/n/10 ing the data or use an ex-plicit con-verter (all savers are lo- cated in the \OT1/cmtt/m/n/10 weka.core.converters Overfull \hbox (22.94261pt too wide) in paragraph at lines 1471--1474 []\OT1/cmr/m/n/10 Use the \OT1/cmtt/m/n/10 DataSink \OT1/cmr/m/n/10 class (in-n er class of \OT1/cmtt/m/n/10 weka.core.converters.ConverterUtils\OT1/cmr/m/n/10 ), [226] [227] Overfull \hbox (34.02615pt too wide) in paragraph at lines 1575--1578 \OT1/cmr/m/n/10 tions, us-ing the \OT1/cmtt/m/n/10 ThresholdCurve \OT1/cmr/m/n/ 10 class (pack-age \OT1/cmtt/m/n/10 weka.classifiers.evaluation\OT1/cmr/m/n/10 ). Overfull \hbox (30.6928pt too wide) in paragraph at lines 1580--1583 \OT1/cmr/m/n/10 in-stance of the \OT1/cmtt/m/n/10 ThresholdVisualizePanel \OT1/ cmr/m/n/10 class (pack-age \OT1/cmtt/m/n/10 weka.gui.visualize\OT1/cmr/m/n/10 ) . Overfull \hbox (15.9971pt too wide) in paragraph at lines 1594--1594 [] \OT1/cmtt/m/n/10 Instances curve = tc.getCurve(eval.predictions(), classIn dex);[] Overfull \hbox (5.4972pt too wide) in paragraph at lines 1610--1610 [] \OT1/cmtt/m/n/10 ThresholdVisualizePanel tvp = new ThresholdVisualizePanel ();[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 1610--1610 [] \OT1/cmtt/m/n/10 Utils.doubleToString(ThresholdCurve.getROCArea(curve),4 )+")");[] Overfull \hbox (0.24724pt too wide) in paragraph at lines 1620--1620 [] \OT1/cmtt/m/n/10 final JFrame jf = new JFrame("WEKA ROC: " + tvp.getName() );[] Underfull \vbox (badness 10000) has occurred while \output is active [228] Overfull \vbox (24.493pt too high) has occurred while \output is active [229] Overfull \hbox (1.49698pt too wide) in paragraph at lines 1665--1665 [] \OT1/cmtt/m/n/10 JFrame jf = new JFrame("Weka Classifier Tree Visualizer: J48");[] [230] [231] [232] Overfull \hbox (17.24684pt too wide) in paragraph at lines 1778--1778 [] \OT1/cmtt/m/n/10 Object o[] = SerializationHelper.readAll("/some/where/j48 .model");[] ) [233] [234] Chapter 17. (./extending.tex [235] (./extending_classifier.tex Underfull \vbox (badness 10000) has occurred while \output is active [236] Overfull \vbox (64.17354pt too high) has occurred while \output is active [237] [238] [239] Overfull \hbox (6.74693pt too wide) in paragraph at lines 192--192 [] \OT1/cmtt/m/n/10 result.addAll(Arrays.asList(super.getOptions())); // sup erclass[] Overfull \hbox (30.47186pt too wide) in paragraph at lines 227--231 \OT1/cmr/m/n/10 re-turns the class prob-a-bil-i-ties ar-ray of the pre-dic-tion for the given \OT1/cmtt/m/n/10 weka.core.Instance [240] Overfull \hbox (42.88777pt too wide) in paragraph at lines 232--243 \OT1/cmr/m/n/10 bel in-dex based on the prob-a-bil-i-ties ar-ray that the \OT1/ cmtt/m/n/10 distributionForInstance(Instance) [241] [242] [243] Underfull \hbox (badness 10000) in paragraph at lines 360--374 Overfull \hbox (0.55939pt too wide) in paragraph at lines 390--397 []\OT1/cmr/m/it/10 multi-instance clas-si-fiers \OT1/cmr/m/n/10 -- in or-der to sig-nal that the spe-cial multi-instance Overfull \hbox (5.27605pt too wide) in paragraph at lines 390--397 \OT1/cmr/m/n/10 instance, \OT1/cmtt/m/n/10 weka.core.MultiInstanceCapabilitiesH andler\OT1/cmr/m/n/10 , which re-turns [244] Overfull \hbox (5.08153pt too wide) in paragraph at lines 441--446 \OT1/cmr/m/n/10 in case of de-scen-dants of the \OT1/cmtt/m/n/10 weka.classifie r.MultipleClassifiersCombiner\OT1/cmr/m/n/10 , Overfull \hbox (14.09583pt too wide) in paragraph at lines 461--461 [] \OT1/cmtt/m/n/9 result.enable(Capability.NOMINAL_CLASS); // only nominal classes allowed[] [245] Overfull \vbox (104.0pt too high) has occurred while \output is active [246] [247] Overfull \hbox (17.24684pt too wide) in paragraph at lines 603--603 [] \OT1/cmtt/m/n/10 weka.core.CheckOptionHandler -W classname [-- additional pa rameters][] Overfull \hbox (59.46141pt too wide) in paragraph at lines 640--645 \OT1/cmr/m/n/10 class. The su-per-class for clas-si-fier unit tests is \OT1/cmt t/m/n/10 weka.classifiers.AbstractClassifierTest\OT1/cmr/m/n/10 . ) [248] (./extending_filter.tex Overfull \hbox (26.02608pt too wide) in paragraph at lines 63--67 \OT1/cmtt/m/n/10 weka.filters.Filter \OT1/cmr/m/n/10 su-per-class does not im-p le-ment the \OT1/cmtt/m/n/10 weka.core.OptionHandler [249] [250] Overfull \hbox (34.38815pt too wide) in paragraph at lines 125--132 \OT1/cmr/m/n/10 de-ter-mine what the out-put for-mat will be (and set if via \O T1/cmtt/m/n/10 setOutputFormat(Instances)\OT1/cmr/m/n/10 ) [251] (./includes/BatchFilter.tex) [252] (./includes/BatchFilter2.tex) [253] (./includes/BatchFilter3.tex) Overfull \vbox (68.45831pt too high) has occurred while \output is active [254] (./includes/StreamFilter.tex) [255] [256] (./includes/SimpleBatch.tex Overfull \hbox (33.25543pt too wide) in paragraph at lines 45--45 [] \OT1/cmtt/m/n/8 return "A simple batch filter that adds an additional a ttribute 'blah' at the end "[] Overfull \hbox (7.75507pt too wide) in paragraph at lines 45--45 [] \OT1/cmtt/m/n/8 result.enable(Capability.NO_CLASS); //// filter doesn't need class to be set//[] ) [257] [258] (./includes/SimpleStream.tex Overfull \hbox (7.75507pt too wide) in paragraph at lines 50--50 [] \OT1/cmtt/m/n/8 result.enable(Capability.NO_CLASS); //// filter doesn't need class to be set//[] ) [259] Overfull \hbox (15.32312pt too wide) in paragraph at lines 319--322 \OT1/cmr/m/n/10 bu-tions into ac-count. Must im-ple-ment the \OT1/cmtt/m/n/10 w eka.filters.SupervisedFilter Overfull \hbox (0.93573pt too wide) in paragraph at lines 336--338 \OT1/cmr/m/n/10 The Javadoc gen-er-a-tion works the same as with clas-si-fiers. See sec-tion ``Javadoc'' [260] Overfull \hbox (17.24684pt too wide) in paragraph at lines 360--360 [] \OT1/cmtt/m/n/10 weka.core.CheckOptionHandler -W classname [-- additional pa rameters][] Overfull \hbox (77.71982pt too wide) in paragraph at lines 386--390 []\OT1/cmr/m/n/10 Here is an ex-am-ple call for \OT1/cmtt/m/n/10 weka.filters.u nsupervised.attribute.ReplaceMissingValues ) [261] (./extending_other_algorithms.tex Overfull \hbox (1.7496pt too wide) in paragraph at lines 36--39 \OT1/cmr/m/n/10 like the \OT1/cmtt/m/n/10 FilteredClusterer \OT1/cmr/m/n/10 tha t fil-ters the data on-the-fly for the base-clusterer. Underfull \hbox (badness 10000) in paragraph at lines 36--39 Overfull \hbox (56.46068pt too wide) in paragraph at lines 50--55 \OT1/cmr/m/n/10 one way or an-other. \OT1/cmtt/m/n/10 RandomizableClusterer\OT1 /cmr/m/n/10 , \OT1/cmtt/m/n/10 RandomizableDensityBasedClusterer [262] Overfull \hbox (3.24855pt too wide) in paragraph at lines 116--118 \OT1/cmr/m/n/10 For ju-nit tests, you can sub-class the \OT1/cmtt/m/n/10 weka.c lusterers.AbstractClustererTest [263] Overfull \hbox (0.3597pt too wide) in paragraph at lines 137--140 \OT1/cmr/m/n/10 The an-ces-tor for all eval-u-a-tors is the \OT1/cmtt/m/n/10 we ka.attributeSelection.ASEvaluation Underfull \hbox (badness 10000) in paragraph at lines 137--140 [264] Overfull \hbox (10.55435pt too wide) in paragraph at lines 189--192 \OT1/cmr/m/n/10 The an-ces-tor for all search al-go-rithms is the \OT1/cmtt/m/n /10 weka.attributeSelection.ASSearch Underfull \hbox (badness 10000) in paragraph at lines 189--192 Overfull \hbox (45.24818pt too wide) in paragraph at lines 216--220 \OT1/cmr/m/n/10 For ju-nit tests, you can sub-class the \OT1/cmtt/m/n/10 weka.a ttributeSelection.AbstractEvaluatorTest [265] Overfull \hbox (5.08264pt too wide) in paragraph at lines 228--235 \OT1/cmr/m/n/10 can also im-ple-ment a meta-associator, de-rived from \OT1/cmtt /m/n/10 SingleAssociatorEnhancer\OT1/cmr/m/n/10 . Overfull \hbox (1.49698pt too wide) in paragraph at lines 258--258 [] \OT1/cmtt/m/n/10 public void buildAssociations(Instances data) throws Excep tion {[] [266] Overfull \hbox (1.49698pt too wide) in paragraph at lines 283--283 [] \OT1/cmtt/m/n/10 AbstractAssociator.runAssociator(new FunkyAssociator(), args);[] Overfull \hbox (1.49698pt too wide) in paragraph at lines 290--290 [] \OT1/cmtt/m/n/10 weka.associations.CheckAssociator -W classname [further op tions][] ) Overfull \hbox (18.99841pt too wide) in paragraph at lines 291--62 \OT1/cmr/m/n/10 For ju-nit tests, you can sub-class the \OT1/cmtt/m/n/10 weka.a ssociations.AbstractAssociatorTest [267] (./extending_explorer.tex Overfull \hbox (11.74733pt too wide) in paragraph at lines 41--44 []\OT1/cmtt/m/n/10 weka.gui.explorer.Explorer.CapabilitiesFilterChangeListener Overfull \hbox (18.02759pt too wide) in paragraph at lines 45--47 []\OT1/cmr/m/n/10 adding the class-name of your class to the Tabs prop-erty in the \OT1/cmtt/m/n/10 Explorer.props Overfull \hbox (68.49664pt too wide) in paragraph at lines 85--85 [] \OT1/cmtt/m/n/10 /** sends notifications when the set of working instances gets changed*/[] Overfull \hbox (89.49646pt too wide) in paragraph at lines 85--85 [] \OT1/cmtt/m/n/10 protected PropertyChangeSupport m_Support = new PropertyC hangeSupport(this);[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 122--122 [] \OT1/cmtt/m/n/10 return "SQL"; // what's displayed as tab-title, e.g., Classify[] Overfull \hbox (52.74678pt too wide) in paragraph at lines 122--122 [] \OT1/cmtt/m/n/10 return "Retrieving data from databases"; // the toolti p of the tab[] Overfull \hbox (0.24724pt too wide) in paragraph at lines 122--122 [] \OT1/cmtt/m/n/10 /** ignored, since we "generate" data and not receive it */[] Overfull \hbox (57.99673pt too wide) in paragraph at lines 122--122 [] \OT1/cmtt/m/n/10 /** PropertyChangeListener which will be notified of valu e changes. */[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 122--122 [] \OT1/cmtt/m/n/10 public void addPropertyChangeListener(PropertyChangeListe ner l) {[] Overfull \hbox (47.49683pt too wide) in paragraph at lines 122--122 [] \OT1/cmtt/m/n/10 public void removePropertyChangeListener(PropertyChangeLi stener l) {[] [268] Overfull \vbox (91.59024pt too high) has occurred while \output is active [269] Overfull \hbox (31.74696pt too wide) in paragraph at lines 138--138 [] \OT1/cmtt/m/n/10 /** the Load button - makes the data available in the Exp lorer */[] Overfull \hbox (47.49683pt too wide) in paragraph at lines 171--171 [] \OT1/cmtt/m/n/10 Instances data = query.retrieveInstances(m_Viewer.g etQuery());[] Overfull \hbox (89.49646pt too wide) in paragraph at lines 171--171 [] \OT1/cmtt/m/n/10 // set data in preprocess panel (also notifies of c apabilties changes)[] Overfull \hbox (5.4972pt too wide) in paragraph at lines 171--171 [] \OT1/cmtt/m/n/10 getExplorer().getPreprocessPanel().setInstances(dat a);[] Overfull \vbox (69.0pt too high) has occurred while \output is active [270] [271] Overfull \hbox (68.49664pt too wide) in paragraph at lines 221--221 [] \OT1/cmtt/m/n/10 /** sends notifications when the set of working instances gets changed*/[] Overfull \hbox (89.49646pt too wide) in paragraph at lines 221--221 [] \OT1/cmtt/m/n/10 protected PropertyChangeSupport m_Support = new PropertyC hangeSupport(this);[] Overfull \hbox (89.49646pt too wide) in paragraph at lines 253--253 [] \OT1/cmtt/m/n/10 return "DataGeneration"; // what's displayed as tab-ti tle, e.g., Classify[] Overfull \hbox (52.74678pt too wide) in paragraph at lines 253--253 [] \OT1/cmtt/m/n/10 return "Generating artificial datasets"; // the toolti p of the tab[] Overfull \hbox (0.24724pt too wide) in paragraph at lines 253--253 [] \OT1/cmtt/m/n/10 /** ignored, since we "generate" data and not receive it */[] Overfull \hbox (57.99673pt too wide) in paragraph at lines 253--253 [] \OT1/cmtt/m/n/10 /** PropertyChangeListener which will be notified of valu e changes. */[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 253--253 [] \OT1/cmtt/m/n/10 public void addPropertyChangeListener(PropertyChangeListe ner l) {[] Overfull \hbox (47.49683pt too wide) in paragraph at lines 253--253 [] \OT1/cmtt/m/n/10 public void removePropertyChangeListener(PropertyChangeLi stener l) {[] Overfull \vbox (92.50687pt too high) has occurred while \output is active [272] Overfull \hbox (89.49646pt too wide) in paragraph at lines 269--269 [] \OT1/cmtt/m/n/10 protected GenericObjectEditor m_GeneratorEditor = new Gen ericObjectEditor();[] Overfull \hbox (10.74715pt too wide) in paragraph at lines 269--269 [] \OT1/cmtt/m/n/10 protected JButton m_ButtonGenerate = new JButton("Generat e");[] Overfull \hbox (84.2465pt too wide) in paragraph at lines 302--302 [] \OT1/cmtt/m/n/10 DataGenerator generator = (DataGenerator) m_Generator Editor.getValue();[] Overfull \hbox (78.99655pt too wide) in paragraph at lines 302--302 [] \OT1/cmtt/m/n/10 String cname = generator.getClass().getName().replace All(".*\\.", "");[] Overfull \hbox (89.49646pt too wide) in paragraph at lines 302--302 [] \OT1/cmtt/m/n/10 cmd += " "+Utils.joinOptions(((OptionHandler)genera tor).getOptions());[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 302--302 [] \OT1/cmtt/m/n/10 DataGenerator.makeData(generator, generator.getOpti ons());[] Overfull \hbox (47.49683pt too wide) in paragraph at lines 302--302 [] \OT1/cmtt/m/n/10 getExplorer(), "Error generating data:\n" + ex.ge tMessage(),[] Overfull \vbox (48.0pt too high) has occurred while \output is active [273] Overfull \hbox (84.2465pt too wide) in paragraph at lines 333--333 [] \OT1/cmtt/m/n/10 Instances data = new Instances(new StringReader(m_O utput.getText()));[] Overfull \hbox (89.49646pt too wide) in paragraph at lines 333--333 [] \OT1/cmtt/m/n/10 // set data in preprocess panel (also notifies of c apabilties changes)[] Overfull \hbox (5.4972pt too wide) in paragraph at lines 333--333 [] \OT1/cmtt/m/n/10 getExplorer().getPreprocessPanel().setInstances(dat a);[] Overfull \hbox (47.49683pt too wide) in paragraph at lines 333--333 [] \OT1/cmtt/m/n/10 getExplorer(), "Error generating data:\n" + ex.ge tMessage(),[] Overfull \vbox (81.85202pt too high) has occurred while \output is active [274] Overfull \vbox (57.81944pt too high) has occurred while \output is active [275] Overfull \hbox (34.60944pt too wide) in paragraph at lines 418--422 \OT1/cmr/m/n/10 home di-rec-tory) un-der the key \OT1/cmtt/m/n/10 weka.gui.visu alize.plugins.VisualizePlugin\OT1/cmr/m/n/10 . [276] [277] )) [278] Chapter 18. (./technical_documentation.tex Underfull \hbox (badness 10000) in paragraph at lines 21--22 [279] Underfull \hbox (badness 10000) in paragraph at lines 81--82 Underfull \hbox (badness 10000) in paragraph at lines 83--84 Underfull \hbox (badness 10000) in paragraph at lines 85--93 Underfull \hbox (badness 10000) in paragraph at lines 94--95 Underfull \hbox (badness 10000) in paragraph at lines 96--97 Underfull \hbox (badness 10000) in paragraph at lines 98--99 Underfull \hbox (badness 10000) in paragraph at lines 104--105 Underfull \hbox (badness 10000) in paragraph at lines 106--107 Overfull \hbox (95.24629pt too wide) in paragraph at lines 114--115 [][][]\OT1/cmtt/m/n/10 export CLASSPATH=$CLASSPATH:/home/johndoe/jars/mysql-con nector-java-5.1.7-bin.jar Overfull \hbox (95.24629pt too wide) in paragraph at lines 120--121 [][][]\OT1/cmtt/m/n/10 setenv CLASSPATH $CLASSPATH:/home/johndoe/jars/mysql-con nector-java-5.1.7-bin.jar [280] Underfull \hbox (badness 10000) in paragraph at lines 141--143 Underfull \hbox (badness 10000) in paragraph at lines 146--147 Underfull \hbox (badness 10000) in paragraph at lines 148--149 Underfull \hbox (badness 10000) in paragraph at lines 150--151 Underfull \hbox (badness 10000) in paragraph at lines 152--154 Underfull \hbox (badness 10000) in paragraph at lines 163--165 Underfull \hbox (badness 10000) in paragraph at lines 170--176 [281] Overfull \hbox (7.98488pt too wide) in paragraph at lines 177--178 \OT1/cmr/m/n/10 Here's once again how you start the Weka Main-GUI \OT1/cmr/bx/n /10 with \OT1/cmr/m/n/10 your cur-rent [][]\OT1/cmtt/m/n/10 CLASSPATH Overfull \hbox (0.24724pt too wide) in paragraph at lines 181--182 [][]\OT1/cmtt/m/n/10 java -Xmx128m -classpath "%CLASSPATH%;weka.jar" weka.gui.M ain Underfull \hbox (badness 10000) in paragraph at lines 187--188 Underfull \hbox (badness 10000) in paragraph at lines 189--190 Underfull \hbox (badness 10000) in paragraph at lines 210--211 Underfull \hbox (badness 10000) in paragraph at lines 212--213 Underfull \hbox (badness 10000) in paragraph at lines 214--215 Overfull \hbox (37.9968pt too wide) in paragraph at lines 216--217 [][][][][] Underfull \hbox (badness 10000) in paragraph at lines 216--217 Underfull \hbox (badness 10000) in paragraph at lines 219--220 [282] Underfull \hbox (badness 10000) in paragraph at lines 223--224 Overfull \hbox (43.24675pt too wide) in paragraph at lines 225--226 [][][][][] Underfull \hbox (badness 10000) in paragraph at lines 245--246 [283] Overfull \hbox (14.55481pt too wide) in paragraph at lines 265--274 \OT1/cmr/m/n/10 run-time (rather than us-ing only those spec-i-fied in the [][] \OT1/cmtt/m/n/10 GenericObjectEditor.props Underfull \hbox (badness 10000) in paragraph at lines 300--306 [284] Overfull \vbox (48.59024pt too high) has occurred while \output is active [285] Underfull \hbox (badness 10000) in paragraph at lines 375--380 Underfull \hbox (badness 10000) in paragraph at lines 381--382 Underfull \hbox (badness 10000) in paragraph at lines 383--384 Underfull \hbox (badness 10000) in paragraph at lines 385--386 Overfull \hbox (3.66528pt too wide) in paragraph at lines 387--390 \OT1/cmr/m/n/10 Where the [][]\OT1/cmtt/m/n/10 []\OT1/cmr/m/n/10 cor-re-s ponds to a key in the [][]\OT1/cmtt/m/n/10 GenericPropertiesCreator.props Overfull \hbox (64.49643pt too wide) in paragraph at lines 412--412 []\OT1/cmtt/m/n/10 # exclude all ResultListeners that also implement the Result Producer interface[] [286] Underfull \hbox (badness 10000) in paragraph at lines 416--427 Overfull \hbox (53.24666pt too wide) in paragraph at lines 428--429 [][][]\OT1/cmtt/m/n/10 java -classpath "/development:/distribution/weka.jar" we ka.gui.GUIChooser Underfull \hbox (badness 10000) in paragraph at lines 428--429 [287] Underfull \hbox (badness 10000) in paragraph at lines 456--457 [288] [289] Underfull \hbox (badness 10000) in paragraph at lines 493--494 Underfull \hbox (badness 10000) in paragraph at lines 495--496 Underfull \hbox (badness 10000) in paragraph at lines 497--498 Underfull \hbox (badness 10000) in paragraph at lines 520--524 [290] Overfull \hbox (17.24684pt too wide) in paragraph at lines 567--567 [] \OT1/cmtt/m/n/10 [] Underfull \hbox (badness 10000) in paragraph at lines 574--577 Underfull \hbox (badness 10000) in paragraph at lines 577--585 [291] Underfull \hbox (badness 10000) in paragraph at lines 586--592 Overfull \hbox (21.24706pt too wide) in paragraph at lines 600--600 [] \OT1/cmtt/m/n/10 [] Underfull \hbox (badness 10000) in paragraph at lines 606--611 Overfull \hbox (26.49701pt too wide) in paragraph at lines 615--615 [] \OT1/cmtt/m/n/10 [] [292] Overfull \hbox (4.64594pt too wide) in paragraph at lines 661--661 [] \OT1/cmtt/m/n/9 [] Overfull \hbox (4.64594pt too wide) in paragraph at lines 661--661 [] \OT1/cmtt/m/n/9 [] Overfull \hbox (32.9956pt too wide) in paragraph at lines 661--661 [] \OT1/cmtt/m/n/9 [] Overfull \hbox (37.72055pt too wide) in paragraph at lines 661--661 [] \OT1/cmtt/m/n/9 [] Overfull \hbox (9.37088pt too wide) in paragraph at lines 661--661 [] \OT1/cmtt/m/n/9 [] Underfull \hbox (badness 10000) in paragraph at lines 663--668 [293] Underfull \hbox (badness 10000) in paragraph at lines 722--723 Underfull \hbox (badness 10000) in paragraph at lines 724--725 [294] Overfull \hbox (43.80186pt too wide) in paragraph at lines 749--750 []\OT1/cmr/m/n/10 The DTD for KOML can be found at [][][][] Underfull \hbox (badness 10000) in paragraph at lines 749--750 Underfull \hbox (badness 10000) in paragraph at lines 751--752 Underfull \hbox (badness 10000) in paragraph at lines 753--754 Overfull \hbox (75.44197pt too wide) in paragraph at lines 756--759 \OT1/cmr/m/n/10 put file (see op-tions of [][]\OT1/cmtt/m/n/10 weka.experiment. Experiment []\OT1/cmr/m/n/10 and [][]\OT1/cmtt/m/n/10 weka.experiment.RemoteExp eriment Underfull \hbox (badness 10000) in paragraph at lines 783--790 Overfull \hbox (3.01225pt too wide) in paragraph at lines 799--805 \OT1/cmr/m/n/10 The GraphVi-su-al-izer ([][]\OT1/cmtt/m/n/10 weka.gui.graphvisu alizer.GraphVisualizer[]\OT1/cmr/m/n/10 ) can save [295] Overfull \hbox (17.24684pt too wide) in paragraph at lines 825--825 [] \OT1/cmtt/m/n/10 [] Overfull \hbox (11.99689pt too wide) in paragraph at lines 825--825 [] \OT1/cmtt/m/n/10 [] ) [296] Chapter 19. (./other_resources.tex Underfull \hbox (badness 10000) in paragraph at lines 51--56 Underfull \hbox (badness 10000) in paragraph at lines 57--58 [297] Underfull \hbox (badness 10000) in paragraph at lines 65--68 Underfull \hbox (badness 10000) in paragraph at lines 91--93 Underfull \hbox (badness 10000) in paragraph at lines 94--95 Underfull \hbox (badness 10000) in paragraph at lines 106--108 Underfull \vbox (badness 1371) has occurred while \output is active [298] Overfull \hbox (5.99707pt too wide) in paragraph at lines 109--110 [][][]\OT1/cmtt/m/n/10 java weka.core.converters.CSVLoader filename.csv > filen ame.arff Underfull \hbox (badness 10000) in paragraph at lines 109--110 Underfull \hbox (badness 10000) in paragraph at lines 112--114 Underfull \hbox (badness 10000) in paragraph at lines 115--116 Underfull \hbox (badness 10000) in paragraph at lines 123--126 Underfull \hbox (badness 10000) in paragraph at lines 127--128 Overfull \hbox (16.19777pt too wide) in paragraph at lines 132--138 \OT1/cmr/m/n/10 Get-ting [][]\OT1/cmtt/m/n/10 java.lang.NoClassDefFoundError [] \OT1/cmr/m/n/10 ex-cep-tions? Most likely your \OT1/cmr/bx/n/10 CLASS- Underfull \hbox (badness 10000) in paragraph at lines 132--138 Underfull \hbox (badness 10000) in paragraph at lines 139--140 Underfull \hbox (badness 10000) in paragraph at lines 141--142 Underfull \hbox (badness 10000) in paragraph at lines 143--144 [299] Underfull \hbox (badness 10000) in paragraph at lines 145--148 Underfull \hbox (badness 10000) in paragraph at lines 149--150 Underfull \hbox (badness 10000) in paragraph at lines 159--162 [300] Overfull \hbox (69.74638pt too wide) in paragraph at lines 236--236 []\OT1/cmtt/m/n/10 /usr/share/themes/Mist/gtk-2.0/gtkrc:48: Engine "mist" is un supported, ignoring[] Overfull \hbox (153.74565pt too wide) in paragraph at lines 236--236 [] \OT1/cmtt/m/n/10 at weka.gui.explorer.PreprocessPanel.addPropertyChang eListener(PreprocessPanel.java:519)[] Overfull \hbox (95.99615pt too wide) in paragraph at lines 236--236 [] \OT1/cmtt/m/n/10 at javax.swing.plaf.synth.SynthPanelUI.installListene rs(SynthPanelUI.java:49)[] Overfull \hbox (59.24648pt too wide) in paragraph at lines 236--236 [] \OT1/cmtt/m/n/10 at javax.swing.plaf.synth.SynthPanelUI.installUI(Synt hPanelUI.java:38)[] Underfull \hbox (badness 10000) in paragraph at lines 245--247 Underfull \hbox (badness 10000) in paragraph at lines 248--249 Underfull \hbox (badness 10000) in paragraph at lines 250--251 Underfull \hbox (badness 10000) in paragraph at lines 252--253 Underfull \hbox (badness 10000) in paragraph at lines 255--256 [301] Underfull \hbox (badness 10000) in paragraph at lines 257--258 Overfull \hbox (9.16362pt too wide) in paragraph at lines 264--265 []\OT1/cmr/m/n/10 Java VM op-tions ([][][][]) ) (./bibliography.tex [302] Underfull \hbox (badness 3514) in paragraph at lines 31--35 []\OT1/cmr/m/it/10 Weka Ex-am-ples \OT1/cmr/m/n/10 -- A col-lec-tion of ex-am-p le classes, as part of Underfull \hbox (badness 5119) in paragraph at lines 31--35 \OT1/cmr/m/n/10 an ANT project, in-cluded in the WEKA snap-shots (avail-able Underfull \hbox (badness 10000) in paragraph at lines 31--35 \OT1/cmr/m/n/10 for down-load on the home-page) or di-rectly from sub-ver-sion Overfull \hbox (64.80228pt too wide) in paragraph at lines 31--35 [][][][] Underfull \vbox (badness 10000) has occurred while \output is active [303] Overfull \vbox (45.33775pt too high) has occurred while \output is active [304] Overfull \hbox (22.2144pt too wide) in paragraph at lines 103--106 []\OT1/cmr/m/n/9 Cozman. See [][][][] ) [305] (./manual.aux) LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. ) (see the transcript file for additional information) Output written on manual.dvi (305 pages, 990764 bytes). Transcript written on manual.log. This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=latex) restricted \write18 enabled. entering extended mode (./manual.tex LaTeX2e <2024-06-01> patch level 2 L3 programming layer <2024-08-16> (/usr/share/texlive/texmf-dist/tex/latex/base/book.cls Document Class: book 2024/02/08 v1.4n Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo)) (/usr/share/texlive/texmf-dist/tex/latex/graphics/epsfig.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/dvips.def)))) (/usr/share/texlive/texmf-dist/tex/latex/wrapfig/wrapfig.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty) (/usr/share/texlive/texmf-dist/tex/latex/kvsetkeys/kvsetkeys.sty) (/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty) (/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty (/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty) (/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty (/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty))) (/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty (/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty) (/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty (/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty))) (/usr/share/texlive/texmf-dist/tex/latex/etoolbox/etoolbox.sty) (/usr/share/texlive/texmf-dist/tex/generic/stringenc/stringenc.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) (/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/puenc.def) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty (/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty)) (/usr/share/texlive/texmf-dist/tex/latex/base/atbegshi-ltx.sty)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hdvips.def (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pdfmark.def (/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty (/usr/share/texlive/texmf-dist/tex/latex/base/atveryend-ltx.sty) (/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty)))) (./hyphenation.tex) (./extensions.tex) (/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-dvips.def) (./manual.aux) (./manual.out) (./manual.out) [1] Underfull \hbox (badness 10000) in paragraph at lines 43--50 Underfull \hbox (badness 10000) in paragraph at lines 43--50 Underfull \hbox (badness 10000) in paragraph at lines 43--50 \OT1/cmr/m/n/10 This man-ual is li-censed un-der the GNU Gen-eral Pub-lic Li-ce nse Underfull \hbox (badness 4279) in paragraph at lines 43--50 \OT1/cmr/m/n/10 ver-sion 2. More in-for-ma-tion about this li-cense can be foun d at [2] (./manual.toc [3] [4] [5] [6] [7] [8]) [9] [10] [11] [12] Chapter 1. (./commandline.tex [13] Overfull \hbox (9.08328pt too wide) in paragraph at lines 46--46 [] \OT1/cmtt/m/n/7 % Any relation to real weather is purely coincidental.[] Overfull \hbox (20.43309pt too wide) in paragraph at lines 39--54 [] Overfull \hbox (20.43309pt too wide) in paragraph at lines 56--70 [] Overfull \hbox (20.43309pt too wide) in paragraph at lines 72--87 [] Overfull \hbox (20.43309pt too wide) in paragraph at lines 89--104 [] Overfull \hbox (20.43309pt too wide) in paragraph at lines 106--120 [] Overfull \hbox (20.43309pt too wide) in paragraph at lines 122--141 [] Underfull \vbox (badness 1616) has occurred while \output is active [14] Overfull \hbox (16.8051pt too wide) in paragraph at lines 155--156 \OT1/cmtt/m/n/10 converters.CSVLoader\OT1/cmr/m/n/10 , which can be used to im- port C45 datasets and comma/tab- [15] Overfull \hbox (63.24817pt too wide) in paragraph at lines 166--167 \OT1/cmr/m/n/10 Any learn-ing al-go-rithm in WEKA is de-rived from the ab-strac t \OT1/cmtt/m/n/10 weka.classifiers.Classifier [16] [17] [18] Overfull \hbox (2.46945pt too wide) in paragraph at lines 375--376 []\OT1/cmtt/m/n/10 meta.ClassificationViaRegression -W functions.LinearRegressi on [19] Overfull \hbox (20.43309pt too wide) in paragraph at lines 391--418 [] Overfull \hbox (1.64569pt too wide) in paragraph at lines 427--427 [] \OT1/cmtt/m/n/7 Time taken to test model on training data: 0 seconds[] Overfull \hbox (20.43309pt too wide) in paragraph at lines 420--435 [] Overfull \hbox (5.36449pt too wide) in paragraph at lines 464--464 [] \OT1/cmtt/m/n/7 TP Rate FP Rate Precision Recall F-Measure Class[] Overfull \hbox (20.43309pt too wide) in paragraph at lines 437--472 [] Underfull \vbox (badness 10000) has occurred while \output is active [20] Overfull \hbox (1.64569pt too wide) in paragraph at lines 503--503 [] \OT1/cmtt/m/n/7 Correctly Classified Instances 9 64.2857 %[] Overfull \hbox (1.64569pt too wide) in paragraph at lines 503--503 [] \OT1/cmtt/m/n/7 Incorrectly Classified Instances 5 35.7143 %[] Overfull \hbox (5.36449pt too wide) in paragraph at lines 503--503 [] \OT1/cmtt/m/n/7 TP Rate FP Rate Precision Recall F-Measure Class[] Overfull \hbox (20.43309pt too wide) in paragraph at lines 474--511 [] [21] Overfull \hbox (0.61818pt too wide) in paragraph at lines 522--523 []\OT1/cmr/m/n/10 The \OT1/cmr/m/it/10 F-Measure \OT1/cmr/m/n/10 is sim-ply 2*P re-ci-sion*Recall/(Precision+Recall), a com-bined Overfull \hbox (17.81848pt too wide) in paragraph at lines 547--547 [] \OT1/cmtt/m/n/7 0 diaporthe-stem-canker 0.9999672587892333 diaporthe-stem-c anker[] Overfull \hbox (17.81848pt too wide) in paragraph at lines 547--547 [] \OT1/cmtt/m/n/7 1 diaporthe-stem-canker 0.9999992614503429 diaporthe-stem-c anker[] Overfull \hbox (14.09969pt too wide) in paragraph at lines 547--547 [] \OT1/cmtt/m/n/7 2 diaporthe-stem-canker 0.999998948559035 diaporthe-stem-ca nker[] Overfull \hbox (17.81848pt too wide) in paragraph at lines 547--547 [] \OT1/cmtt/m/n/7 3 diaporthe-stem-canker 0.9999998441238833 diaporthe-stem-c anker[] Overfull \hbox (17.81848pt too wide) in paragraph at lines 547--547 [] \OT1/cmtt/m/n/7 4 diaporthe-stem-canker 0.9999989997681132 diaporthe-stem-c anker[] Overfull \hbox (10.38089pt too wide) in paragraph at lines 547--547 [] \OT1/cmtt/m/n/7 5 rhizoctonia-root-rot 0.9999999395928124 rhizoctonia-root- rot[] Overfull \hbox (6.6621pt too wide) in paragraph at lines 547--547 [] \OT1/cmtt/m/n/7 6 rhizoctonia-root-rot 0.999998912860593 rhizoctonia-root-r ot[] Overfull \hbox (10.38089pt too wide) in paragraph at lines 547--547 [] \OT1/cmtt/m/n/7 7 rhizoctonia-root-rot 0.9999994386283236 rhizoctonia-root- rot[] Underfull \hbox (badness 1953) in paragraph at lines 551--552 \OT1/cmr/m/n/10 dicted class value, the con-fi- Overfull \hbox (48.88585pt too wide) in paragraph at lines 533--555 [] Overfull \hbox (48.88585pt too wide) in paragraph at lines 557--580 [] Overfull \hbox (26.73993pt too wide) in paragraph at lines 592--593 \OT1/cmr/m/n/10 Dividing by the num-ber of in-stances in the test set, i.e. \OT 1/cmtt/m/n/10 wc -l < soybean-test.preds [22] (./includes/learning_curves.tex Overfull \hbox (67.78633pt too wide) in paragraph at lines 21--21 [] \OT1/cmtt/m/n/7 java weka.filters.supervised.instance.StratifiedRemoveFol ds -N 4 -F 1 -S $run -c last -i ../$f -o $run/t_$f[] Overfull \hbox (78.94272pt too wide) in paragraph at lines 21--21 [] \OT1/cmtt/m/n/7 java weka.filters.supervised.instance.StratifiedRemoveFol ds -N 4 -F 1 -S $run -V -c last -i ../$f -o $run/t0$f[] Overfull \hbox (38.03596pt too wide) in paragraph at lines 21--21 [] \OT1/cmtt/m/n/7 java weka.filters.supervised.instance.Resample -S 0 -Z 83 -c last -i $run/t$nr$f -o $run/t$nrp1$f[] [23]) Overfull \hbox (82.66151pt too wide) in paragraph at lines 663--663 [] \OT1/cmtt/m/n/7 -M "weka.classifiers.meta.ClassificationViaRegression -W weka.classifiers.functions.LinearRegression -- -S 1" \[] ) [24] [25] [26] Chapter 2. (./launching.tex [27] Overfull \hbox (9.861pt too wide) in paragraph at lines 86--87 []\OT1/cmr/bx/n/10 Weka on Source-forge \OT1/cmr/m/n/10 WEKA's project home-pag e on Source-forge.net. [28]) [29] [30] Chapter 3. (./simplecli.tex [31] [32] Overfull \hbox (67.06445pt too wide) in paragraph at lines 92--94 \OT1/cmr/m/n/10 with a dot (Unix/Linux: \OT1/cmtt/m/n/10 ./some/other/path/file \OT1/cmr/m/n/10 ; Win-dows: .$\OMS/cmsy/m/n/10 n$\OT1/cmr/m/n/10 Some$\OMS/cmsy /m/n/10 n$\OT1/cmr/m/n/10 Other$\OMS/cmsy/m/n/10 n$\OT1/cmr/m/n/10 Path$\OMS/cm sy/m/n/10 n$\OT1/cmr/m/n/10 file). ) [33] [34] Chapter 4. (./explorer.tex [35] [36] [37] [38] [39] Underfull \hbox (badness 10000) in paragraph at lines 298--308 [40] [41] [42] [43] [44] [45] [46] [47] [48] Underfull \hbox (badness 10000) in paragraph at lines 657--666 [49] [50]) [51] [52] Chapter 5. (./experimenter.tex [53] [54] Underfull \vbox (badness 1082) has occurred while \output is active [55] [56] [57] [58] [59] Underfull \vbox (badness 10000) has occurred while \output is active [60] [61] [62] Underfull \vbox (badness 7704) has occurred while \output is active [63] [64] [65] Underfull \vbox (badness 10000) has occurred while \output is active [66] Overfull \hbox (74.99634pt too wide) in paragraph at lines 409--409 [] \OT1/cmtt/m/n/10 @attribute Key_Scheme {weka.classifiers.rules.ZeroR,weka.cl assifiers.trees.J48}[] Overfull \hbox (38.24666pt too wide) in paragraph at lines 409--409 [] \OT1/cmtt/m/n/10 @attribute Key_Scheme_version_ID {48055541465867954,-217733 168393644444}[] [67] Overfull \hbox (1.49698pt too wide) in paragraph at lines 409--409 [] \OT1/cmtt/m/n/10 @attribute Summary {'Number of leaves: 3\nSize of the tree: 5\n',[] Overfull \hbox (48.74657pt too wide) in paragraph at lines 409--409 [] \OT1/cmtt/m/n/10 iris,1,weka.classifiers.rules.ZeroR,,48055541465867954,2005 1221.033,99,51,[] Overfull \hbox (69.74638pt too wide) in paragraph at lines 409--409 [] \OT1/cmtt/m/n/10 17,34,0,33.333333,66.666667,0,0,0.444444,0.471405,100,100,8 0.833088,80.833088,[] Overfull \hbox (59.24648pt too wide) in paragraph at lines 409--409 [] \OT1/cmtt/m/n/10 0,1.584963,1.584963,0,0,0,0,1,17,1,34,0,0,0,0,0.333333,1,0. 5,0.5,0,0,?,?,?,?[] [68] [69] Underfull \vbox (badness 10000) has occurred while \output is active [70] Underfull \vbox (badness 10000) has occurred while \output is active [71] [72] [73] Overfull \hbox (38.24666pt too wide) in paragraph at lines 536--536 []\OT1/cmtt/m/n/10 ClassifierSplitEvaluator: weka.classifiers.trees.J48 -C 0.25 -M 2(version[] Overfull \hbox (1.49698pt too wide) in paragraph at lines 536--536 []\OT1/cmtt/m/n/10 Correctly Classified Instances 47 92. 1569 %[] Overfull \hbox (1.49698pt too wide) in paragraph at lines 536--536 []\OT1/cmtt/m/n/10 Incorrectly Classified Instances 4 7. 8431 %[] [74] [75] [76] Overfull \hbox (0.2135pt too wide) in paragraph at lines 584--585 []\OT1/cmr/m/n/10 As with the other Re-sult-Pro-duc-ers, ad-di-tional schemes c an be de-fined. When Underfull \vbox (badness 10000) has occurred while \output is active [77] Underfull \vbox (badness 10000) has occurred while \output is active [78] [79] Underfull \hbox (badness 10000) in paragraph at lines 605--610 Overfull \hbox (34.37631pt too wide) in paragraph at lines 613--614 [] [80] [81] Overfull \hbox (8.24261pt too wide) in paragraph at lines 656--657 [] [82] Overfull \hbox (17.30408pt too wide) in paragraph at lines 686--687 []\OT1/cmr/m/n/10 Additional jar archives, i.e., JDBC drivers, are stored in \O T1/cmtt/m/n/10 /home/johndoe/jars\OT1/cmr/m/n/10 . [83] Overfull \hbox (12.8892pt too wide) in paragraph at lines 737--738 []\OT1/cmr/m/n/10 Create a script, called \OT1/cmtt/m/n/10 /home/johndoe/remote []engine/startRemoteEngine\OT1/cmr/m/n/10 , Overfull \hbox (22.24724pt too wide) in paragraph at lines 745--745 [] \OT1/cmtt/m/n/10 -classpath /home/johndoe/jars/hsqldb.jar:remoteEngine.jar \[] Overfull \hbox (16.99728pt too wide) in paragraph at lines 753--753 [] \OT1/cmtt/m/n/10 -classpath /home/johndoe/jars/mysql.jar:remoteEngine.jar \[] [84] Overfull \hbox (75.70413pt too wide) in paragraph at lines 778--779 []\OT1/cmr/m/n/10 Edit this file and change the "\OT1/cmtt/m/n/9 jdbcURL=jdbc:h sqldb:hsql://server[]name/database[]name\OT1/cmr/m/n/9 " Overfull \hbox (11.41405pt too wide) in paragraph at lines 778--779 \OT1/cmr/m/n/9 server (e.g., \OT1/cmtt/m/n/9 jdbcURL=jdbc:hsqldb:hsql://dodo.co mpany.com/experiment\OT1/cmr/m/n/9 ). 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(./knowledgeflow.tex [95] [96] [97] [98] Overfull \hbox (36.43697pt too wide) in paragraph at lines 133--135 []\OT1/cmr/m/it/10 ClassifierPerformanceEvaluator \OT1/cmr/m/n/10 - eval-u-ate the per-for-mance of batch trained/tested Overfull \hbox (35.54247pt too wide) in paragraph at lines 137--139 []\OT1/cmr/m/it/10 ClustererPerformanceEvaluator \OT1/cmr/m/n/10 - eval-u-ate t he per-for-mance of batch trained/tested [99] [100] [101] [102] Overfull \hbox (11.53027pt too wide) in paragraph at lines 268--269 [] [103] [104] Overfull \hbox (24.88557pt too wide) in paragraph at lines 359--360 [] [105] [106] Overfull \hbox (1.07347pt too wide) in paragraph at lines 435--453 \OT1/cmr/m/n/10 mech-a-nism. 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(./arffviewer.tex [109] [110] [111] [112] ) [113] [114] Chapter 8. (./bayesnet.tex [115] [116] Underfull \vbox (badness 2103) has occurred while \output is active [117] Overfull \hbox (13.24905pt too wide) in paragraph at lines 180--185 \OT1/cmr/m/n/10 fer-ent from the ADTree clas-si-fier al-go-rithm from \OT1/cmtt /m/n/10 weka.classifiers.tree.ADTree\OT1/cmr/m/n/10 . [118] [119] [120] Underfull \hbox (badness 10000) in paragraph at lines 331--336 [121] Underfull \hbox (badness 10000) in paragraph at lines 352--356 Underfull \hbox (badness 10000) in paragraph at lines 361--376 [122] Overfull \hbox (38.44424pt too wide) has occurred while \output is active \OT1/cmr/m/sl/10 8.3. CONDITIONAL INDEPENDENCE TEST BASED STRUCTURE LEARNING \ OT1/cmr/m/n/10 123 [123] Overfull \hbox (106.49606pt too wide) in paragraph at lines 426--426 [] \OT1/cmtt/m/n/10 Rule 5: if no edges are directed then take a rand om one (first we can find)[] Underfull \hbox (badness 10000) in paragraph at lines 434--442 [124] Underfull \vbox (badness 1867) has occurred while \output is active [125] [126] [127] Overfull \hbox (28.27066pt too wide) in paragraph at lines 597--597 [] \OT1/cmtt/m/n/9 Sets test file. If missing, a cross-validation will b e performed on the[] [128] Overfull \hbox (14.09583pt too wide) in paragraph at lines 597--597 [] \OT1/cmtt/m/n/9 Retrieves the options from the XML-data instead of th e command line.[] [129] Overfull \hbox (57.99673pt too wide) in paragraph at lines 644--644 [] \OT1/cmtt/m/n/10 Use tournament selection (true) or maximum subpopul atin (false).[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 644--644 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 644--644 [] \OT1/cmtt/m/n/10 after a network structure is learned. 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This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 720--720 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] [131] Overfull \hbox (42.24687pt too wide) in paragraph at lines 738--738 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 738--738 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 738--738 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 764--764 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 764--764 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 764--764 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 774--774 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 774--774 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 774--774 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] [132] Overfull \hbox (42.24687pt too wide) in paragraph at lines 784--784 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 784--784 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 784--784 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 799--799 [] \OT1/cmtt/m/n/10 When determining whether an edge exists a search is performed[] Overfull \hbox (52.74678pt too wide) in paragraph at lines 799--799 [] \OT1/cmtt/m/n/10 for a set Z that separates the nodes. MaxCardinalit y determines[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 799--799 [] \OT1/cmtt/m/n/10 the maximum size of the set Z. This greatly influen ces the[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 799--799 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 799--799 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 799--799 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] Overfull \hbox (57.99673pt too wide) in paragraph at lines 829--829 [] \OT1/cmtt/m/n/10 Use tournament selection (true) or maximum subpopul atin (false).[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 829--829 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] [133] Overfull \hbox (31.74696pt too wide) in paragraph at lines 829--829 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 829--829 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 849--849 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 849--849 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 849--849 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 869--869 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 869--869 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 869--869 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] [134] Overfull \hbox (42.24687pt too wide) in paragraph at lines 893--893 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 893--893 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 893--893 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 914--914 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 914--914 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 914--914 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] [135] Overfull \hbox (42.24687pt too wide) in paragraph at lines 943--943 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 943--943 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 943--943 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] Overfull \hbox (42.24687pt too wide) in paragraph at lines 956--956 [] \OT1/cmtt/m/n/10 Applies a Markov Blanket correction to the network structure,[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 956--956 [] \OT1/cmtt/m/n/10 after a network structure is learned. This ensures that all[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 956--956 [] \OT1/cmtt/m/n/10 nodes in the network are part of the Markov blanket of the[] Overfull \hbox (10.74715pt too wide) in paragraph at lines 961--961 [] \OT1/cmtt/m/n/10 Name of file containing network structure in BIF fo rmat[] [136] [137] Overfull \hbox (641.9914pt too wide) in paragraph at lines 1043--1043 []\OT1/cmtt/m/n/10 Scheme: weka.classifiers.bayes.BayesNet -D -B iris.xml -Q weka.classifiers.bayes.net.search.local.K2 -- -P 2 -S BAYES -E weka.classif iers.bayes.net.estimate.SimpleEstimator -- -A 0.5[] Overfull \hbox (106.49606pt too wide) in paragraph at lines 1061--1061 []\OT1/cmtt/m/n/10 Relation: iris-weka.filters.unsupervised.attribute.Discr etize-B2-M-1.0-Rfirst-last[] [138] Overfull \hbox (1.49698pt too wide) in paragraph at lines 1123--1123 []\OT1/cmtt/m/n/10 Correctly Classified Instances 116 77. 3333 %[] Overfull \hbox (1.49698pt too wide) in paragraph at lines 1123--1123 []\OT1/cmtt/m/n/10 Incorrectly Classified Instances 34 22. 6667 %[] [139] [140] Underfull \hbox (badness 10000) in paragraph at lines 1181--1191 [141] Overfull \hbox (109.99007pt too wide) in paragraph at lines 1199--1200 [] Underfull \vbox (badness 4569) has occurred while \output is active [142] Overfull \hbox (31.52597pt too wide) in paragraph at lines 1232--1244 \OT1/cmr/m/n/10 vari-ables are dis-cretized us-ing the \OT1/cmtt/m/n/10 weka.fi lters.supervised.attribute.Discretize Underfull \vbox (badness 10000) has occurred while \output is active [143] [144] Underfull \hbox (badness 10000) in paragraph at lines 1298--1308 Overfull \hbox (5.15332pt too wide) in paragraph at lines 1316--1319 []\OT1/cmr/m/n/10 The Gen-er-ate Net-work menu al-lows gen-er-a-tion of a com-p lete ran-dom Bayesian [145] [146] Overfull \hbox (17.96149pt too wide) in paragraph at lines 1375--1376 [] Underfull \vbox (badness 10000) has occurred while \output is active [147] Overfull \hbox (11.45515pt too wide) in paragraph at lines 1409--1410 [] [148] [149] [150] Underfull \vbox (badness 1675) has occurred while \output is active [151] [152] [153] Overfull \hbox (76.10909pt too wide) in paragraph at lines 1570--1576 []\OT1/cmr/m/n/10 Create a class that de-rives from \OT1/cmtt/m/n/10 weka.class ifiers.bayes.net.search.SearchAlgorithm\OT1/cmr/m/n/10 . Overfull \hbox (6.74959pt too wide) in paragraph at lines 1570--1576 \OT1/cmr/m/n/10 validation based, you prob-a-bly want to de-rive from \OT1/cmtt /m/n/10 ScoreSearchAlgorithm\OT1/cmr/m/n/10 , Overfull \hbox (56.55356pt too wide) in paragraph at lines 1570--1576 \OT1/cmtt/m/n/10 CISearchAlgorithm \OT1/cmr/m/n/10 or \OT1/cmtt/m/n/10 CVSearch Algorithm \OT1/cmr/m/n/10 in-stead of de-riv-ing from \OT1/cmtt/m/n/10 SearchAl gorithm Overfull \hbox (29.2748pt too wide) in paragraph at lines 1577--1582 \OT1/cmtt/m/n/10 public void buildStructure(BayesNet bayesNet, Instances instan ces)\OT1/cmr/m/n/10 . Overfull \hbox (6.05424pt too wide) in paragraph at lines 1577--1582 \OT1/cmr/m/n/10 You can ac-cess the par-entsets us-ing \OT1/cmtt/m/n/10 bayesNe t.getParentSet(iAttribute) Overfull \hbox (10.74715pt too wide) in paragraph at lines 1583--1587 \OT1/cmtt/m/n/10 bayesNet.getParentSet(iAttribute).AddParent(iParent, instances ) Overfull \hbox (36.44255pt too wide) in paragraph at lines 1588--1596 []\OT1/cmr/m/n/10 Alternatively, im-ple-ment \OT1/cmtt/m/n/10 public void searc h(BayesNet bayesNet, Instances Overfull \hbox (2.57175pt too wide) in paragraph at lines 1617--1621 \OT1/cmtt/m/n/10 weka.classifiers.bayes.net.estimate.BayesNetEstimator\OT1/cmr/ m/n/10 . Let's say Overfull \hbox (29.2748pt too wide) in paragraph at lines 1622--1627 \OT1/cmtt/m/n/10 public void updateClassifier(BayesNet bayesNet, Instance insta nce)\OT1/cmr/m/n/10 , Overfull \hbox (31.74696pt too wide) in paragraph at lines 1622--1627 \OT1/cmtt/m/n/10 public double[] distributionForInstance(BayesNet bayesNet, Ins tance [154] Overfull \hbox (7.02576pt too wide) in paragraph at lines 1644--1648 \OT1/cmr/m/n/10 Use the class \OT1/cmtt/m/n/10 weka.filters.unsupervised.attrib ute.Discretize \OT1/cmr/m/n/10 to dis-cretize Overfull \hbox (27.74675pt too wide) in paragraph at lines 1644--1648 \OT1/cmtt/m/n/10 java weka.filters.unsupervised.attribute.Discretize -B 3 -i in file.arff Overfull \hbox (1.49698pt too wide) in paragraph at lines 1655--1659 \OT1/cmtt/m/n/10 java weka.classifiers.bayes.net.BayesNetGenerator -B -N 10 -A 9 -C Overfull \hbox (1.49698pt too wide) in paragraph at lines 1661--1665 \OT1/cmtt/m/n/10 java weka.classifiers.bayes.net.BayesNetGenerator -N 15 -A 20 -C 3 Overfull \hbox (22.4968pt too wide) in paragraph at lines 1667--1671 \OT1/cmtt/m/n/10 java weka.classifiers.bayes.net.BayesNetGenerator -F alarm.xml -M 1000 [155] [156] Overfull \hbox (5.66734pt too wide) in paragraph at lines 1731--1735 []\OT1/cmr/m/n/10 Only leave-one-out, k-fold and cu-mu-la-tive cross-validation are im-ple-mented. Overfull \hbox (8.08392pt too wide) in paragraph at lines 1731--1735 \OT1/cmr/m/n/10 These im-ple-men-ta-tions can be made more ef-fi-cient and othe r cross-validation ) [157] [158] [159] [160] Chapter 9. (./arff.tex Overfull \hbox (6.74693pt too wide) in paragraph at lines 41--41 [] \OT1/cmtt/m/n/10 % (b) Donor: Michael Marshall (MARSHALL%PLU@io.arc.na sa.gov)[] Overfull \hbox (22.4968pt too wide) in paragraph at lines 41--41 [] \OT1/cmtt/m/n/10 @ATTRIBUTE class {Iris-setosa,Iris-versicolor,Iris- virginica}[] [161] (/usr/share/texlive/texmf-dist/tex/latex/base/ts1cmtt.fd) [162] Overfull \hbox (2.27603pt too wide) in paragraph at lines 116--117 \OT1/cmr/m/n/10 pos-si-ble val-ues: $\OML/cmm/m/it/10 <$\OT1/cmtt/m/n/10 nomina l-name1$\OML/cmm/m/it/10 >$\OT1/cmtt/m/n/10 , $\OML/cmm/m/it/10 <$\OT1/cmtt/m/n /10 nominal-name2$\OML/cmm/m/it/10 >$\OT1/cmtt/m/n/10 , $\OML/cmm/m/it/10 <$\OT 1/cmtt/m/n/10 nominal-name3$\OML/cmm/m/it/10 >$\OT1/cmtt/m/n/10 , [163] [164] [165]) [166] Chapter 10. (./xrff.tex [167] Overfull \hbox (80.24629pt too wide) in paragraph at lines 127--127 [] \OT1/cmtt/m/n/10 [] [168] [169] [170]) [171] [172] Chapter 11. (./converters.tex [173] Overfull \hbox (0.24724pt too wide) in paragraph at lines 60--60 [] \OT1/cmtt/m/n/10 java weka.core.converters.CSVLoader iris.csv > iris.ar ff[] Overfull \hbox (15.9971pt too wide) in paragraph at lines 70--70 [] \OT1/cmtt/m/n/10 java weka.core.converters.CSVSaver -i iris.arff -o iri s.csv[] [174] Overfull \hbox (57.99673pt too wide) in paragraph at lines 99--99 [] \OT1/cmtt/m/n/10 java weka.core.converters.DatabaseLoader -Q "select * f rom employee"[] Overfull \hbox (21.24706pt too wide) in paragraph at lines 104--104 [] \OT1/cmtt/m/n/10 java weka.core.converters.DatabaseSaver -i iris.arff - T iris[] ) [175] [176] Chapter 12. (./stemmers.tex Overfull \hbox (68.33246pt too wide) in paragraph at lines 29--30 \OT1/cmr/m/n/10 Weka con-tains a wrap-per class for the Snow-ball (home-page: [ ][][][]) [177] Overfull \hbox (46.33209pt too wide) in paragraph at lines 49--50 []\OT1/cmr/m/n/10 within the String-ToWord-Vec-tor (pack-age \OT1/cmtt/m/n/10 w eka.filters.unsupervised.attribute\OT1/cmr/m/n/10 ) Overfull \hbox (4.85867pt too wide) in paragraph at lines 73--74 \OT1/cmr/m/n/10 the \OT1/cmtt/m/n/10 GenericObjectEditor.props\OT1/cmr/m/n/10 / \OT1/cmtt/m/n/10 GenericPropertiesCreator.props \OT1/cmr/m/n/10 file ) [178] Chapter 13. (./databases.tex Overfull \hbox (9.77429pt too wide) in paragraph at lines 37--38 []\OT1/cmtt/m/n/10 DatabaseUtils.props.mssqlserver2005 \OT1/cmr/m/n/10 - MS SQL Server 2005 ($\OML/cmm/m/it/10 >\OT1/cmr/m/n/10 =$3.4.11, Overfull \hbox (9.10817pt too wide) in paragraph at lines 39--41 []\OT1/cmtt/m/n/10 DatabaseUtils.props.odbc \OT1/cmr/m/n/10 - ODBC ac-cess via Sun's ODBC/JDBC bridge, Underfull \hbox (badness 10000) in paragraph at lines 46--47 Underfull \hbox (badness 10000) in paragraph at lines 48--49 [179] [180] Overfull \hbox (89.10794pt too wide) in paragraph at lines 103--108 \OT1/cmtt/m/n/10 jdbc:postgresql://server.my.domain:5432/MyDatabase?user=$\OML/ cmm/m/it/10 <$\OT1/cmtt/m/n/10 ...$\OML/cmm/m/it/10 >$\OT1/cmtt/m/n/10 &passwor d=$\OML/cmm/m/it/10 <$\OT1/cmtt/m/n/10 ...$\OML/cmm/m/it/10 >$ Underfull \vbox (badness 3679) has occurred while \output is active [181] [182] Overfull \hbox (27.9972pt too wide) in paragraph at lines 183--185 [][][][] Overfull \hbox (0.8047pt too wide) in paragraph at lines 201--202 \OT1/cmr/m/n/10 com-mand \OT1/cmtt/m/n/10 java weka.core.SystemInfo \OT1/cmr/m/ n/10 and check whether the prop- [183]) [184] Chapter 14. (./windows_databases.tex [185] [186]) [187] [188] [189] [190] Chapter 15. (./research.tex Overfull \hbox (31.02701pt too wide) in paragraph at lines 32--33 \OT1/cmr/m/n/10 ter-face it is now easy to ex-tract all the pa-per ref-er-ences via \OT1/cmtt/m/n/10 weka.core.ClassDiscovery [191] (./includes/get_wekatechinfo.tex [192] Overfull \hbox (90.0991pt too wide) in paragraph at lines 124--124 []\OT1/cmtt/m/n/7 TECHINFOHANDLERS=`$JAVA weka.core.ClassDiscovery $TECHINFOHAN DLER $PACKAGES | grep "\. weka" | sed s/".*weka"/weka/g`[] )) [193] [194] Chapter 16. (./using_api.tex Underfull \hbox (badness 10000) in paragraph at lines 35--40 [195] Overfull \hbox (3.8326pt too wide) in paragraph at lines 104--113 \OT1/cmr/m/n/10 support-vector ma-chine clas-si-fier \OT1/cmr/m/it/10 SMO \OT1/ cmr/m/n/10 (pack-age \OT1/cmtt/m/n/10 weka.classifiers.functions\OT1/cmr/m/n/10 ) [196] Overfull \hbox (8.05441pt too wide) in paragraph at lines 125--130 \OT1/cmr/m/n/10 method, it is best to have a look at the \OT1/cmtt/m/n/10 setOp tions(String[]) \OT1/cmr/m/n/10 and \OT1/cmtt/m/n/10 getOptions() Overfull \hbox (6.08145pt too wide) in paragraph at lines 140--148 []\OT1/cmr/m/n/10 A \OT1/cmtt/m/n/10 SelectedTag \OT1/cmr/m/n/10 gets con-struc ted us-ing the ar-ray of all pos-si-ble \OT1/cmtt/m/n/10 weka.core.Tag Overfull \hbox (11.99689pt too wide) in paragraph at lines 156--156 [] \OT1/cmtt/m/n/10 setEvaluation(new SelectedTag(EVALUATION_CC, TAGS_EVALU ATION));[] [197] Overfull \hbox (1.93398pt too wide) in paragraph at lines 178--183 \OT1/cmr/m/n/10 the \OT1/cmtt/m/n/10 attribute(int) \OT1/cmr/m/n/10 method. Thi s method re-turns \OT1/cmtt/m/n/10 weka.core.Attribute Overfull \hbox (27.33139pt too wide) in paragraph at lines 203--206 []\OT1/cmr/m/n/10 The \OT1/cmtt/m/n/10 DataSource \OT1/cmr/m/n/10 class (in-ner class of the \OT1/cmtt/m/n/10 weka.core.converters.ConverterUtils [198] Underfull \hbox (badness 10000) in paragraph at lines 246--249 Overfull \hbox (3.25064pt too wide) in paragraph at lines 299--301 \OT1/cmr/m/n/10 loaded into mem-ory and then pro-vided row-by-row (``pseudo-inc remental''). [199] [200] Overfull \hbox (21.26906pt too wide) in paragraph at lines 318--321 \OT1/cmr/m/n/10 The class \OT1/cmtt/m/n/10 wekaexamples.core.CreateInstances \O T1/cmr/m/n/10 of the \OT1/cmr/m/it/10 Weka Ex-am-ples \OT1/cmr/m/n/10 collectio n[[]] Overfull \hbox (41.44293pt too wide) in paragraph at lines 332--335 \OT1/cmr/m/n/10 For all of the dif-fer-ent at-tribute types, WEKA uses the same class, \OT1/cmtt/m/n/10 weka.core.Attribute\OT1/cmr/m/n/10 , Overfull \hbox (10.74715pt too wide) in paragraph at lines 351--351 [] \OT1/cmtt/m/n/10 Attribute date = new Attribute("name_of_attr", "yyyy-MM-d d");[] Overfull \hbox (47.49683pt too wide) in paragraph at lines 372--372 [] \OT1/cmtt/m/n/10 Attribute string = new Attribute("name_of_attr", (FastVec tor) null);[] Underfull \vbox (badness 10000) has occurred while \output is active [201] Overfull \vbox (76.493pt too high) has occurred while \output is active [202] Overfull \hbox (31.74696pt too wide) in paragraph at lines 390--390 [] \OT1/cmtt/m/n/10 Attribute relational = new Attribute("name_of_attr", rel_ struct);[] Overfull \hbox (11.99689pt too wide) in paragraph at lines 408--408 [] \OT1/cmtt/m/n/10 Instances dataset = new Instances("Test-dataset", attribu tes, 0);[] Overfull \hbox (9.12917pt too wide) in paragraph at lines 418--421 \OT1/cmr/m/n/10 to it, row by row. There are ba-si-cally two con-struc-tors of the \OT1/cmtt/m/n/10 weka.core.Instance Overfull \hbox (12.8311pt too wide) in paragraph at lines 422--426 []\OT1/cmtt/m/n/10 Instance(double weight, double[] attValues) \OT1/cmr/m/n/10 -- gen-er-ates an \OT1/cmtt/m/n/10 Instance Overfull \vbox (46.59024pt too high) has occurred while \output is active [203] Overfull \hbox (26.49701pt too wide) in paragraph at lines 468--468 [] \OT1/cmtt/m/n/10 values[3] = data.attribute(3).addStringValue("This is a st ring");[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 480--480 [] \OT1/cmtt/m/n/10 Instances dataRel = new Instances(data.attribute(4).relati on(),0);[] [204] Overfull \hbox (24.165pt too wide) in paragraph at lines 501--504 \OT1/cmr/m/n/10 Simply gen-er-at-ing an ARFF file is achieved us-ing the static \OT1/cmtt/m/n/10 DataGenerator.makeData Overfull \hbox (28.96251pt too wide) in paragraph at lines 501--504 \OT1/cmr/m/n/10 method. In or-der to write to a file, the gen-er-a-tor needs to have a \OT1/cmtt/m/n/10 java.io.PrintWriter Overfull \hbox (6.74693pt too wide) in paragraph at lines 520--520 [] \OT1/cmtt/m/n/10 new java.io.BufferedWriter(new java.io.FileWriter("rdg1.ar ff")));[] [205] Overfull \hbox (20.5538pt too wide) in paragraph at lines 567--570 []\OT1/cmr/m/n/10 Using the \OT1/cmtt/m/n/10 Randomize \OT1/cmr/m/n/10 fil-ter (pack-age \OT1/cmtt/m/n/10 weka.filters.unsupervised.instance\OT1/cmr/m/n/10 ). [206] [207] Overfull \hbox (22.4968pt too wide) in paragraph at lines 671--671 [] \OT1/cmtt/m/n/10 remove.setInputFormat(data); // inform filter abo ut dataset[] Overfull \hbox (11.99689pt too wide) in paragraph at lines 671--671 [] \OT1/cmtt/m/n/10 // **AFTER** setting options[] Overfull \hbox (22.4968pt too wide) in paragraph at lines 671--671 [] \OT1/cmtt/m/n/10 Instances newData = Filter.useFilter(data, remove); // ap ply filter[] Overfull \hbox (18.08133pt too wide) in paragraph at lines 672--677 \OT1/cmr/m/n/10 A com-mon trap to fall into is set-ting op-tions \OT1/cmr/bx/n/ 10 af-ter \OT1/cmr/m/n/10 the \OT1/cmtt/m/n/10 setInputFormat(Instances) Overfull \hbox (5.97029pt too wide) in paragraph at lines 689--693 \OT1/cmr/m/n/10 with the \OT1/cmtt/m/n/10 Standardize \OT1/cmr/m/n/10 fil-ter ( pack-age \OT1/cmtt/m/n/10 weka.filters.unsupervised.attribute\OT1/cmr/m/n/10 ): [208] Overfull \hbox (17.5531pt too wide) in paragraph at lines 710--721 \OT1/cmr/m/n/10 like \OT1/cmtt/m/n/10 FilteredClassifier \OT1/cmr/m/n/10 (pack- age \OT1/cmtt/m/n/10 weka.classifiers.meta\OT1/cmr/m/n/10 ), \OT1/cmtt/m/n/10 F ilteredClusterer Overfull \hbox (12.72011pt too wide) in paragraph at lines 710--721 \OT1/cmr/m/n/10 (pack-age \OT1/cmtt/m/n/10 weka.clusterers\OT1/cmr/m/n/10 ), \O T1/cmtt/m/n/10 FilteredAssociator \OT1/cmr/m/n/10 (pack-age \OT1/cmtt/m/n/10 we ka.associations\OT1/cmr/m/n/10 ) Overfull \hbox (27.16393pt too wide) in paragraph at lines 710--721 \OT1/cmr/m/n/10 and \OT1/cmtt/m/n/10 FilteredAttributeEval\OT1/cmr/m/n/10 /\OT1 /cmtt/m/n/10 FilteredSubsetEval \OT1/cmr/m/n/10 (in \OT1/cmtt/m/n/10 weka.attri buteSelection\OT1/cmr/m/n/10 ). [209] Overfull \hbox (20.1095pt too wide) in paragraph at lines 817--824 \OT1/cmr/m/n/10 All in-cre-men-tal clas-si-fiers in WEKA im-ple-ment the in-ter -face \OT1/cmtt/m/n/10 UpdateableClassifier Overfull \hbox (5.91695pt too wide) in paragraph at lines 831--833 []\OT1/cmr/m/it/10 update \OT1/cmr/m/n/10 the model row-by-row, by call-ing the \OT1/cmtt/m/n/10 updateClassifier(Instance) [210] [211] Overfull \hbox (21.05566pt too wide) in paragraph at lines 872--874 \OT1/cmr/m/n/10 The eval-u-a-tion step, in-clud-ing col-lec-tion of statis-tics , is per-formed by the \OT1/cmtt/m/n/10 Evaluation [212] Overfull \hbox (11.99689pt too wide) in paragraph at lines 910--910 [] \OT1/cmtt/m/n/10 System.out.println(eval.toSummaryString("\nResults\n\n", false));[] Overfull \hbox (11.99689pt too wide) in paragraph at lines 940--940 [] \OT1/cmtt/m/n/10 System.out.println(eval.toSummaryString("\nResults\n\n", false));[] [213] Overfull \hbox (11.55396pt too wide) in paragraph at lines 950--952 []\OT1/cmtt/m/n/10 toClassDetailsString \OT1/cmr/m/n/10 -- out-puts TP/FP rates , pre-ci-sion, re-call, F-measure, Overfull \hbox (0.47084pt too wide) in paragraph at lines 952--954 []\OT1/cmtt/m/n/10 toCumulativeMarginDistributionString \OT1/cmr/m/n/10 -- out- puts the cu-mu-la-tive mar- [214] Overfull \hbox (27.74675pt too wide) in paragraph at lines 1017--1017 [] \OT1/cmtt/m/n/10 Instances unlabeled = DataSource.read("/some/where/unlabe led.arff");[] Overfull \hbox (11.99689pt too wide) in paragraph at lines 1017--1017 [] \OT1/cmtt/m/n/10 double clsLabel = tree.classifyInstance(unlabeled.insta nce(i));[] Overfull \hbox (6.74693pt too wide) in paragraph at lines 1048--1048 [] \OT1/cmtt/m/n/10 double[] dist = cls.distributionForInstance(test.instan ce(i));[] Overfull \hbox (53.99652pt too wide) in paragraph at lines 1048--1048 [] \OT1/cmtt/m/n/10 System.out.print(test.instance(i).toString(test.classIn dex()) + " - ");[] Overfull \hbox (27.74675pt too wide) in paragraph at lines 1048--1048 [] \OT1/cmtt/m/n/10 System.out.print(test.classAttribute().value((int) pred ) + " - ");[] [215] Overfull \hbox (12.30984pt too wide) in paragraph at lines 1083--1087 []\OT1/cmr/m/it/10 build the model \OT1/cmr/m/n/10 with train-ing data -- call- ing the \OT1/cmtt/m/n/10 buildClusterer(Instances) Overfull \hbox (0.94284pt too wide) in paragraph at lines 1104--1108 \OT1/cmr/m/n/10 Incremental clus-ter-ers in WEKA im-ple-ment the in-ter-face \O T1/cmtt/m/n/10 UpdateableClusterer Overfull \hbox (13.7781pt too wide) in paragraph at lines 1112--1114 []\OT1/cmr/m/it/10 update \OT1/cmr/m/n/10 the model row-by-row by call-ing the the \OT1/cmtt/m/n/10 updateClusterer(Instance) Underfull \vbox (badness 10000) has occurred while \output is active [216] Overfull \vbox (79.67348pt too high) has occurred while \output is active [217] [218] Overfull \hbox (59.24648pt too wide) in paragraph at lines 1160--1160 [] \OT1/cmtt/m/n/10 System.out.println(ClusterEvaluation.evaluateClusterer(new EM(), options));[] Overfull \hbox (53.99652pt too wide) in paragraph at lines 1195--1195 [] \OT1/cmtt/m/n/10 DensityBasedClusterer clusterer = new ... // the clust erer to evaluate[] Overfull \hbox (64.49643pt too wide) in paragraph at lines 1195--1195 [] \OT1/cmtt/m/n/10 new Random(1)); // and rando m number generator[] [219] Overfull \hbox (0.24724pt too wide) in paragraph at lines 1222--1222 [] \OT1/cmtt/m/n/10 filter.setAttributeIndices("" + (data.classIndex() + 1) );[] Overfull \hbox (0.24724pt too wide) in paragraph at lines 1222--1222 [] \OT1/cmtt/m/n/10 Instances dataClusterer = Filter.useFilter(data, filter );[] [220] Overfull \hbox (3.69315pt too wide) in paragraph at lines 1247--1249 []\OT1/cmtt/m/n/10 clusterInstance(Instance) \OT1/cmr/m/n/10 -- de-ter-mines th e clus-ter the \OT1/cmtt/m/n/10 Instance \OT1/cmr/m/n/10 would Overfull \hbox (6.74693pt too wide) in paragraph at lines 1276--1276 [] \OT1/cmtt/m/n/10 int cluster = clusterer.clusterInstance(dataset2.instan ce(i));[] Overfull \hbox (59.24648pt too wide) in paragraph at lines 1276--1276 [] \OT1/cmtt/m/n/10 double[] dist = clusterer.distributionForInstance(datas et2.instance(i));[] [221] Underfull \hbox (badness 10000) in paragraph at lines 1285--1290 Overfull \hbox (3.35565pt too wide) in paragraph at lines 1293--1298 []\OT1/cmr/m/it/10 single at-tribute eval-u-a-tors \OT1/cmr/m/n/10 -- per-form eval-u-a-tions on sin-gle at-tributes. These [222] Overfull \hbox (64.49643pt too wide) in paragraph at lines 1378--1378 [] \OT1/cmtt/m/n/10 AttributeSelectedClassifier classifier = new AttributeSel ectedClassifier();[] Overfull \hbox (22.4968pt too wide) in paragraph at lines 1378--1378 [] \OT1/cmtt/m/n/10 evaluation.crossValidateModel(classifier, data, 10, new R andom(1));[] [223] Overfull \hbox (27.4348pt too wide) in paragraph at lines 1383--1388 \OT1/cmr/m/n/10 train-ing a clas-si-fier, then the fil-ter ap-proach is the rig ht one. The \OT1/cmtt/m/n/10 AttributeSelection [224] [225] Overfull \hbox (50.86061pt too wide) in paragraph at lines 1465--1470 \OT1/cmr/m/n/10 ing the data or use an ex-plicit con-verter (all savers are lo- cated in the \OT1/cmtt/m/n/10 weka.core.converters Overfull \hbox (22.94261pt too wide) in paragraph at lines 1471--1474 []\OT1/cmr/m/n/10 Use the \OT1/cmtt/m/n/10 DataSink \OT1/cmr/m/n/10 class (in-n er class of \OT1/cmtt/m/n/10 weka.core.converters.ConverterUtils\OT1/cmr/m/n/10 ), [226] [227] Overfull \hbox (34.02615pt too wide) in paragraph at lines 1575--1578 \OT1/cmr/m/n/10 tions, us-ing the \OT1/cmtt/m/n/10 ThresholdCurve \OT1/cmr/m/n/ 10 class (pack-age \OT1/cmtt/m/n/10 weka.classifiers.evaluation\OT1/cmr/m/n/10 ). Overfull \hbox (30.6928pt too wide) in paragraph at lines 1580--1583 \OT1/cmr/m/n/10 in-stance of the \OT1/cmtt/m/n/10 ThresholdVisualizePanel \OT1/ cmr/m/n/10 class (pack-age \OT1/cmtt/m/n/10 weka.gui.visualize\OT1/cmr/m/n/10 ) . Overfull \hbox (15.9971pt too wide) in paragraph at lines 1594--1594 [] \OT1/cmtt/m/n/10 Instances curve = tc.getCurve(eval.predictions(), classIn dex);[] Overfull \hbox (5.4972pt too wide) in paragraph at lines 1610--1610 [] \OT1/cmtt/m/n/10 ThresholdVisualizePanel tvp = new ThresholdVisualizePanel ();[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 1610--1610 [] \OT1/cmtt/m/n/10 Utils.doubleToString(ThresholdCurve.getROCArea(curve),4 )+")");[] Overfull \hbox (0.24724pt too wide) in paragraph at lines 1620--1620 [] \OT1/cmtt/m/n/10 final JFrame jf = new JFrame("WEKA ROC: " + tvp.getName() );[] Underfull \vbox (badness 10000) has occurred while \output is active [228] Overfull \vbox (24.493pt too high) has occurred while \output is active [229] Overfull \hbox (1.49698pt too wide) in paragraph at lines 1665--1665 [] \OT1/cmtt/m/n/10 JFrame jf = new JFrame("Weka Classifier Tree Visualizer: J48");[] [230] [231] [232] Overfull \hbox (17.24684pt too wide) in paragraph at lines 1778--1778 [] \OT1/cmtt/m/n/10 Object o[] = SerializationHelper.readAll("/some/where/j48 .model");[] ) [233] [234] Chapter 17. (./extending.tex [235] (./extending_classifier.tex Underfull \vbox (badness 10000) has occurred while \output is active [236] Overfull \vbox (64.17354pt too high) has occurred while \output is active [237] [238] [239] Overfull \hbox (6.74693pt too wide) in paragraph at lines 192--192 [] \OT1/cmtt/m/n/10 result.addAll(Arrays.asList(super.getOptions())); // sup erclass[] Overfull \hbox (30.47186pt too wide) in paragraph at lines 227--231 \OT1/cmr/m/n/10 re-turns the class prob-a-bil-i-ties ar-ray of the pre-dic-tion for the given \OT1/cmtt/m/n/10 weka.core.Instance [240] Overfull \hbox (42.88777pt too wide) in paragraph at lines 232--243 \OT1/cmr/m/n/10 bel in-dex based on the prob-a-bil-i-ties ar-ray that the \OT1/ cmtt/m/n/10 distributionForInstance(Instance) [241] [242] [243] Underfull \hbox (badness 10000) in paragraph at lines 360--374 Overfull \hbox (0.55939pt too wide) in paragraph at lines 390--397 []\OT1/cmr/m/it/10 multi-instance clas-si-fiers \OT1/cmr/m/n/10 -- in or-der to sig-nal that the spe-cial multi-instance Overfull \hbox (5.27605pt too wide) in paragraph at lines 390--397 \OT1/cmr/m/n/10 instance, \OT1/cmtt/m/n/10 weka.core.MultiInstanceCapabilitiesH andler\OT1/cmr/m/n/10 , which re-turns [244] Overfull \hbox (5.08153pt too wide) in paragraph at lines 441--446 \OT1/cmr/m/n/10 in case of de-scen-dants of the \OT1/cmtt/m/n/10 weka.classifie r.MultipleClassifiersCombiner\OT1/cmr/m/n/10 , Overfull \hbox (14.09583pt too wide) in paragraph at lines 461--461 [] \OT1/cmtt/m/n/9 result.enable(Capability.NOMINAL_CLASS); // only nominal classes allowed[] [245] Overfull \vbox (104.0pt too high) has occurred while \output is active [246] [247] Overfull \hbox (17.24684pt too wide) in paragraph at lines 603--603 [] \OT1/cmtt/m/n/10 weka.core.CheckOptionHandler -W classname [-- additional pa rameters][] Overfull \hbox (59.46141pt too wide) in paragraph at lines 640--645 \OT1/cmr/m/n/10 class. The su-per-class for clas-si-fier unit tests is \OT1/cmt t/m/n/10 weka.classifiers.AbstractClassifierTest\OT1/cmr/m/n/10 . ) [248] (./extending_filter.tex Overfull \hbox (26.02608pt too wide) in paragraph at lines 63--67 \OT1/cmtt/m/n/10 weka.filters.Filter \OT1/cmr/m/n/10 su-per-class does not im-p le-ment the \OT1/cmtt/m/n/10 weka.core.OptionHandler [249] [250] Overfull \hbox (34.38815pt too wide) in paragraph at lines 125--132 \OT1/cmr/m/n/10 de-ter-mine what the out-put for-mat will be (and set if via \O T1/cmtt/m/n/10 setOutputFormat(Instances)\OT1/cmr/m/n/10 ) [251] (./includes/BatchFilter.tex) [252] (./includes/BatchFilter2.tex) [253] (./includes/BatchFilter3.tex) Overfull \vbox (68.45831pt too high) has occurred while \output is active [254] (./includes/StreamFilter.tex) [255] [256] (./includes/SimpleBatch.tex Overfull \hbox (33.25543pt too wide) in paragraph at lines 45--45 [] \OT1/cmtt/m/n/8 return "A simple batch filter that adds an additional a ttribute 'blah' at the end "[] Overfull \hbox (7.75507pt too wide) in paragraph at lines 45--45 [] \OT1/cmtt/m/n/8 result.enable(Capability.NO_CLASS); //// filter doesn't need class to be set//[] ) [257] [258] (./includes/SimpleStream.tex Overfull \hbox (7.75507pt too wide) in paragraph at lines 50--50 [] \OT1/cmtt/m/n/8 result.enable(Capability.NO_CLASS); //// filter doesn't need class to be set//[] ) [259] Overfull \hbox (15.32312pt too wide) in paragraph at lines 319--322 \OT1/cmr/m/n/10 bu-tions into ac-count. Must im-ple-ment the \OT1/cmtt/m/n/10 w eka.filters.SupervisedFilter Overfull \hbox (0.93573pt too wide) in paragraph at lines 336--338 \OT1/cmr/m/n/10 The Javadoc gen-er-a-tion works the same as with clas-si-fiers. See sec-tion ``Javadoc'' [260] Overfull \hbox (17.24684pt too wide) in paragraph at lines 360--360 [] \OT1/cmtt/m/n/10 weka.core.CheckOptionHandler -W classname [-- additional pa rameters][] Overfull \hbox (77.71982pt too wide) in paragraph at lines 386--390 []\OT1/cmr/m/n/10 Here is an ex-am-ple call for \OT1/cmtt/m/n/10 weka.filters.u nsupervised.attribute.ReplaceMissingValues ) [261] (./extending_other_algorithms.tex Overfull \hbox (1.7496pt too wide) in paragraph at lines 36--39 \OT1/cmr/m/n/10 like the \OT1/cmtt/m/n/10 FilteredClusterer \OT1/cmr/m/n/10 tha t fil-ters the data on-the-fly for the base-clusterer. Underfull \hbox (badness 10000) in paragraph at lines 36--39 Overfull \hbox (56.46068pt too wide) in paragraph at lines 50--55 \OT1/cmr/m/n/10 one way or an-other. \OT1/cmtt/m/n/10 RandomizableClusterer\OT1 /cmr/m/n/10 , \OT1/cmtt/m/n/10 RandomizableDensityBasedClusterer [262] Overfull \hbox (3.24855pt too wide) in paragraph at lines 116--118 \OT1/cmr/m/n/10 For ju-nit tests, you can sub-class the \OT1/cmtt/m/n/10 weka.c lusterers.AbstractClustererTest [263] Overfull \hbox (0.3597pt too wide) in paragraph at lines 137--140 \OT1/cmr/m/n/10 The an-ces-tor for all eval-u-a-tors is the \OT1/cmtt/m/n/10 we ka.attributeSelection.ASEvaluation Underfull \hbox (badness 10000) in paragraph at lines 137--140 [264] Overfull \hbox (10.55435pt too wide) in paragraph at lines 189--192 \OT1/cmr/m/n/10 The an-ces-tor for all search al-go-rithms is the \OT1/cmtt/m/n /10 weka.attributeSelection.ASSearch Underfull \hbox (badness 10000) in paragraph at lines 189--192 Overfull \hbox (45.24818pt too wide) in paragraph at lines 216--220 \OT1/cmr/m/n/10 For ju-nit tests, you can sub-class the \OT1/cmtt/m/n/10 weka.a ttributeSelection.AbstractEvaluatorTest [265] Overfull \hbox (5.08264pt too wide) in paragraph at lines 228--235 \OT1/cmr/m/n/10 can also im-ple-ment a meta-associator, de-rived from \OT1/cmtt /m/n/10 SingleAssociatorEnhancer\OT1/cmr/m/n/10 . Overfull \hbox (1.49698pt too wide) in paragraph at lines 258--258 [] \OT1/cmtt/m/n/10 public void buildAssociations(Instances data) throws Excep tion {[] [266] Overfull \hbox (1.49698pt too wide) in paragraph at lines 283--283 [] \OT1/cmtt/m/n/10 AbstractAssociator.runAssociator(new FunkyAssociator(), args);[] Overfull \hbox (1.49698pt too wide) in paragraph at lines 290--290 [] \OT1/cmtt/m/n/10 weka.associations.CheckAssociator -W classname [further op tions][] ) Overfull \hbox (18.99841pt too wide) in paragraph at lines 291--62 \OT1/cmr/m/n/10 For ju-nit tests, you can sub-class the \OT1/cmtt/m/n/10 weka.a ssociations.AbstractAssociatorTest [267] (./extending_explorer.tex Overfull \hbox (11.74733pt too wide) in paragraph at lines 41--44 []\OT1/cmtt/m/n/10 weka.gui.explorer.Explorer.CapabilitiesFilterChangeListener Overfull \hbox (18.02759pt too wide) in paragraph at lines 45--47 []\OT1/cmr/m/n/10 adding the class-name of your class to the Tabs prop-erty in the \OT1/cmtt/m/n/10 Explorer.props Overfull \hbox (68.49664pt too wide) in paragraph at lines 85--85 [] \OT1/cmtt/m/n/10 /** sends notifications when the set of working instances gets changed*/[] Overfull \hbox (89.49646pt too wide) in paragraph at lines 85--85 [] \OT1/cmtt/m/n/10 protected PropertyChangeSupport m_Support = new PropertyC hangeSupport(this);[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 122--122 [] \OT1/cmtt/m/n/10 return "SQL"; // what's displayed as tab-title, e.g., Classify[] Overfull \hbox (52.74678pt too wide) in paragraph at lines 122--122 [] \OT1/cmtt/m/n/10 return "Retrieving data from databases"; // the toolti p of the tab[] Overfull \hbox (0.24724pt too wide) in paragraph at lines 122--122 [] \OT1/cmtt/m/n/10 /** ignored, since we "generate" data and not receive it */[] Overfull \hbox (57.99673pt too wide) in paragraph at lines 122--122 [] \OT1/cmtt/m/n/10 /** PropertyChangeListener which will be notified of valu e changes. */[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 122--122 [] \OT1/cmtt/m/n/10 public void addPropertyChangeListener(PropertyChangeListe ner l) {[] Overfull \hbox (47.49683pt too wide) in paragraph at lines 122--122 [] \OT1/cmtt/m/n/10 public void removePropertyChangeListener(PropertyChangeLi stener l) {[] [268] Overfull \vbox (91.59024pt too high) has occurred while \output is active [269] Overfull \hbox (31.74696pt too wide) in paragraph at lines 138--138 [] \OT1/cmtt/m/n/10 /** the Load button - makes the data available in the Exp lorer */[] Overfull \hbox (47.49683pt too wide) in paragraph at lines 171--171 [] \OT1/cmtt/m/n/10 Instances data = query.retrieveInstances(m_Viewer.g etQuery());[] Overfull \hbox (89.49646pt too wide) in paragraph at lines 171--171 [] \OT1/cmtt/m/n/10 // set data in preprocess panel (also notifies of c apabilties changes)[] Overfull \hbox (5.4972pt too wide) in paragraph at lines 171--171 [] \OT1/cmtt/m/n/10 getExplorer().getPreprocessPanel().setInstances(dat a);[] Overfull \vbox (69.0pt too high) has occurred while \output is active [270] [271] Overfull \hbox (68.49664pt too wide) in paragraph at lines 221--221 [] \OT1/cmtt/m/n/10 /** sends notifications when the set of working instances gets changed*/[] Overfull \hbox (89.49646pt too wide) in paragraph at lines 221--221 [] \OT1/cmtt/m/n/10 protected PropertyChangeSupport m_Support = new PropertyC hangeSupport(this);[] Overfull \hbox (89.49646pt too wide) in paragraph at lines 253--253 [] \OT1/cmtt/m/n/10 return "DataGeneration"; // what's displayed as tab-ti tle, e.g., Classify[] Overfull \hbox (52.74678pt too wide) in paragraph at lines 253--253 [] \OT1/cmtt/m/n/10 return "Generating artificial datasets"; // the toolti p of the tab[] Overfull \hbox (0.24724pt too wide) in paragraph at lines 253--253 [] \OT1/cmtt/m/n/10 /** ignored, since we "generate" data and not receive it */[] Overfull \hbox (57.99673pt too wide) in paragraph at lines 253--253 [] \OT1/cmtt/m/n/10 /** PropertyChangeListener which will be notified of valu e changes. */[] Overfull \hbox (31.74696pt too wide) in paragraph at lines 253--253 [] \OT1/cmtt/m/n/10 public void addPropertyChangeListener(PropertyChangeListe ner l) {[] Overfull \hbox (47.49683pt too wide) in paragraph at lines 253--253 [] \OT1/cmtt/m/n/10 public void removePropertyChangeListener(PropertyChangeLi stener l) {[] Overfull \vbox (92.50687pt too high) has occurred while \output is active [272] Overfull \hbox (89.49646pt too wide) in paragraph at lines 269--269 [] \OT1/cmtt/m/n/10 protected GenericObjectEditor m_GeneratorEditor = new Gen ericObjectEditor();[] Overfull \hbox (10.74715pt too wide) in paragraph at lines 269--269 [] \OT1/cmtt/m/n/10 protected JButton m_ButtonGenerate = new JButton("Generat e");[] Overfull \hbox (84.2465pt too wide) in paragraph at lines 302--302 [] \OT1/cmtt/m/n/10 DataGenerator generator = (DataGenerator) m_Generator Editor.getValue();[] Overfull \hbox (78.99655pt too wide) in paragraph at lines 302--302 [] \OT1/cmtt/m/n/10 String cname = generator.getClass().getName().replace All(".*\\.", "");[] Overfull \hbox (89.49646pt too wide) in paragraph at lines 302--302 [] \OT1/cmtt/m/n/10 cmd += " "+Utils.joinOptions(((OptionHandler)genera tor).getOptions());[] Overfull \hbox (26.49701pt too wide) in paragraph at lines 302--302 [] \OT1/cmtt/m/n/10 DataGenerator.makeData(generator, generator.getOpti ons());[] Overfull \hbox (47.49683pt too wide) in paragraph at lines 302--302 [] \OT1/cmtt/m/n/10 getExplorer(), "Error generating data:\n" + ex.ge tMessage(),[] Overfull \vbox (48.0pt too high) has occurred while \output is active [273] Overfull \hbox (84.2465pt too wide) in paragraph at lines 333--333 [] \OT1/cmtt/m/n/10 Instances data = new Instances(new StringReader(m_O utput.getText()));[] Overfull \hbox (89.49646pt too wide) in paragraph at lines 333--333 [] \OT1/cmtt/m/n/10 // set data in preprocess panel (also notifies of c apabilties changes)[] Overfull \hbox (5.4972pt too wide) in paragraph at lines 333--333 [] \OT1/cmtt/m/n/10 getExplorer().getPreprocessPanel().setInstances(dat a);[] Overfull \hbox (47.49683pt too wide) in paragraph at lines 333--333 [] \OT1/cmtt/m/n/10 getExplorer(), "Error generating data:\n" + ex.ge tMessage(),[] Overfull \vbox (81.85202pt too high) has occurred while \output is active [274] Overfull \vbox (57.81944pt too high) has occurred while \output is active [275] Overfull \hbox (34.60944pt too wide) in paragraph at lines 418--422 \OT1/cmr/m/n/10 home di-rec-tory) un-der the key \OT1/cmtt/m/n/10 weka.gui.visu alize.plugins.VisualizePlugin\OT1/cmr/m/n/10 . [276] [277] )) [278] Chapter 18. (./technical_documentation.tex Underfull \hbox (badness 10000) in paragraph at lines 21--22 [279] Underfull \hbox (badness 10000) in paragraph at lines 81--82 Underfull \hbox (badness 10000) in paragraph at lines 83--84 Underfull \hbox (badness 10000) in paragraph at lines 85--93 Underfull \hbox (badness 10000) in paragraph at lines 94--95 Underfull \hbox (badness 10000) in paragraph at lines 96--97 Underfull \hbox (badness 10000) in paragraph at lines 98--99 Underfull \hbox (badness 10000) in paragraph at lines 104--105 Underfull \hbox (badness 10000) in paragraph at lines 106--107 Overfull \hbox (95.24629pt too wide) in paragraph at lines 114--115 [][][]\OT1/cmtt/m/n/10 export CLASSPATH=$CLASSPATH:/home/johndoe/jars/mysql-con nector-java-5.1.7-bin.jar Overfull \hbox (95.24629pt too wide) in paragraph at lines 120--121 [][][]\OT1/cmtt/m/n/10 setenv CLASSPATH $CLASSPATH:/home/johndoe/jars/mysql-con nector-java-5.1.7-bin.jar [280] Underfull \hbox (badness 10000) in paragraph at lines 141--143 Underfull \hbox (badness 10000) in paragraph at lines 146--147 Underfull \hbox (badness 10000) in paragraph at lines 148--149 Underfull \hbox (badness 10000) in paragraph at lines 150--151 Underfull \hbox (badness 10000) in paragraph at lines 152--154 Underfull \hbox (badness 10000) in paragraph at lines 163--165 Underfull \hbox (badness 10000) in paragraph at lines 170--176 [281] Overfull \hbox (7.98488pt too wide) in paragraph at lines 177--178 \OT1/cmr/m/n/10 Here's once again how you start the Weka Main-GUI \OT1/cmr/bx/n /10 with \OT1/cmr/m/n/10 your cur-rent [][]\OT1/cmtt/m/n/10 CLASSPATH Overfull \hbox (0.24724pt too wide) in paragraph at lines 181--182 [][]\OT1/cmtt/m/n/10 java -Xmx128m -classpath "%CLASSPATH%;weka.jar" weka.gui.M ain Underfull \hbox (badness 10000) in paragraph at lines 187--188 Underfull \hbox (badness 10000) in paragraph at lines 189--190 Underfull \hbox (badness 10000) in paragraph at lines 210--211 Underfull \hbox (badness 10000) in paragraph at lines 212--213 Underfull \hbox (badness 10000) in paragraph at lines 214--215 Overfull \hbox (37.9968pt too wide) in paragraph at lines 216--217 [][][][][] Underfull \hbox (badness 10000) in paragraph at lines 216--217 Underfull \hbox (badness 10000) in paragraph at lines 219--220 [282] Underfull \hbox (badness 10000) in paragraph at lines 223--224 Overfull \hbox (43.24675pt too wide) in paragraph at lines 225--226 [][][][][] Underfull \hbox (badness 10000) in paragraph at lines 245--246 [283] Overfull \hbox (14.55481pt too wide) in paragraph at lines 265--274 \OT1/cmr/m/n/10 run-time (rather than us-ing only those spec-i-fied in the [][] \OT1/cmtt/m/n/10 GenericObjectEditor.props Underfull \hbox (badness 10000) in paragraph at lines 300--306 [284] Overfull \vbox (48.59024pt too high) has occurred while \output is active [285] Underfull \hbox (badness 10000) in paragraph at lines 375--380 Underfull \hbox (badness 10000) in paragraph at lines 381--382 Underfull \hbox (badness 10000) in paragraph at lines 383--384 Underfull \hbox (badness 10000) in paragraph at lines 385--386 Overfull \hbox (3.66528pt too wide) in paragraph at lines 387--390 \OT1/cmr/m/n/10 Where the [][]\OT1/cmtt/m/n/10 []\OT1/cmr/m/n/10 cor-re-s ponds to a key in the [][]\OT1/cmtt/m/n/10 GenericPropertiesCreator.props Overfull \hbox (64.49643pt too wide) in paragraph at lines 412--412 []\OT1/cmtt/m/n/10 # exclude all ResultListeners that also implement the Result Producer interface[] [286] Underfull \hbox (badness 10000) in paragraph at lines 416--427 Overfull \hbox (53.24666pt too wide) in paragraph at lines 428--429 [][][]\OT1/cmtt/m/n/10 java -classpath "/development:/distribution/weka.jar" we ka.gui.GUIChooser Underfull \hbox (badness 10000) in paragraph at lines 428--429 [287] Underfull \hbox (badness 10000) in paragraph at lines 456--457 [288] [289] Underfull \hbox (badness 10000) in paragraph at lines 493--494 Underfull \hbox (badness 10000) in paragraph at lines 495--496 Underfull \hbox (badness 10000) in paragraph at lines 497--498 Underfull \hbox (badness 10000) in paragraph at lines 520--524 [290] Overfull \hbox (17.24684pt too wide) in paragraph at lines 567--567 [] \OT1/cmtt/m/n/10 [] Underfull \hbox (badness 10000) in paragraph at lines 574--577 Underfull \hbox (badness 10000) in paragraph at lines 577--585 [291] Underfull \hbox (badness 10000) in paragraph at lines 586--592 Overfull \hbox (21.24706pt too wide) in paragraph at lines 600--600 [] \OT1/cmtt/m/n/10 [] Underfull \hbox (badness 10000) in paragraph at lines 606--611 Overfull \hbox (26.49701pt too wide) in paragraph at lines 615--615 [] \OT1/cmtt/m/n/10 [] [292] Overfull \hbox (4.64594pt too wide) in paragraph at lines 661--661 [] \OT1/cmtt/m/n/9 [] Overfull \hbox (4.64594pt too wide) in paragraph at lines 661--661 [] \OT1/cmtt/m/n/9 [] Overfull \hbox (32.9956pt too wide) in paragraph at lines 661--661 [] \OT1/cmtt/m/n/9 [] Overfull \hbox (37.72055pt too wide) in paragraph at lines 661--661 [] \OT1/cmtt/m/n/9 [] Overfull \hbox (9.37088pt too wide) in paragraph at lines 661--661 [] \OT1/cmtt/m/n/9 [] Underfull \hbox (badness 10000) in paragraph at lines 663--668 [293] Underfull \hbox (badness 10000) in paragraph at lines 722--723 Underfull \hbox (badness 10000) in paragraph at lines 724--725 [294] Overfull \hbox (43.80186pt too wide) in paragraph at lines 749--750 []\OT1/cmr/m/n/10 The DTD for KOML can be found at [][][][] Underfull \hbox (badness 10000) in paragraph at lines 749--750 Underfull \hbox (badness 10000) in paragraph at lines 751--752 Underfull \hbox (badness 10000) in paragraph at lines 753--754 Overfull \hbox (75.44197pt too wide) in paragraph at lines 756--759 \OT1/cmr/m/n/10 put file (see op-tions of [][]\OT1/cmtt/m/n/10 weka.experiment. Experiment []\OT1/cmr/m/n/10 and [][]\OT1/cmtt/m/n/10 weka.experiment.RemoteExp eriment Underfull \hbox (badness 10000) in paragraph at lines 783--790 Overfull \hbox (3.01225pt too wide) in paragraph at lines 799--805 \OT1/cmr/m/n/10 The GraphVi-su-al-izer ([][]\OT1/cmtt/m/n/10 weka.gui.graphvisu alizer.GraphVisualizer[]\OT1/cmr/m/n/10 ) can save [295] Overfull \hbox (17.24684pt too wide) in paragraph at lines 825--825 [] \OT1/cmtt/m/n/10 [] Overfull \hbox (11.99689pt too wide) in paragraph at lines 825--825 [] \OT1/cmtt/m/n/10 [] ) [296] Chapter 19. (./other_resources.tex Underfull \hbox (badness 10000) in paragraph at lines 51--56 Underfull \hbox (badness 10000) in paragraph at lines 57--58 [297] Underfull \hbox (badness 10000) in paragraph at lines 65--68 Underfull \hbox (badness 10000) in paragraph at lines 91--93 Underfull \hbox (badness 10000) in paragraph at lines 94--95 Underfull \hbox (badness 10000) in paragraph at lines 106--108 Underfull \vbox (badness 1371) has occurred while \output is active [298] Overfull \hbox (5.99707pt too wide) in paragraph at lines 109--110 [][][]\OT1/cmtt/m/n/10 java weka.core.converters.CSVLoader filename.csv > filen ame.arff Underfull \hbox (badness 10000) in paragraph at lines 109--110 Underfull \hbox (badness 10000) in paragraph at lines 112--114 Underfull \hbox (badness 10000) in paragraph at lines 115--116 Underfull \hbox (badness 10000) in paragraph at lines 123--126 Underfull \hbox (badness 10000) in paragraph at lines 127--128 Overfull \hbox (16.19777pt too wide) in paragraph at lines 132--138 \OT1/cmr/m/n/10 Get-ting [][]\OT1/cmtt/m/n/10 java.lang.NoClassDefFoundError [] \OT1/cmr/m/n/10 ex-cep-tions? Most likely your \OT1/cmr/bx/n/10 CLASS- Underfull \hbox (badness 10000) in paragraph at lines 132--138 Underfull \hbox (badness 10000) in paragraph at lines 139--140 Underfull \hbox (badness 10000) in paragraph at lines 141--142 Underfull \hbox (badness 10000) in paragraph at lines 143--144 [299] Underfull \hbox (badness 10000) in paragraph at lines 145--148 Underfull \hbox (badness 10000) in paragraph at lines 149--150 Underfull \hbox (badness 10000) in paragraph at lines 159--162 [300] Overfull \hbox (69.74638pt too wide) in paragraph at lines 236--236 []\OT1/cmtt/m/n/10 /usr/share/themes/Mist/gtk-2.0/gtkrc:48: Engine "mist" is un supported, ignoring[] Overfull \hbox (153.74565pt too wide) in paragraph at lines 236--236 [] \OT1/cmtt/m/n/10 at weka.gui.explorer.PreprocessPanel.addPropertyChang eListener(PreprocessPanel.java:519)[] Overfull \hbox (95.99615pt too wide) in paragraph at lines 236--236 [] \OT1/cmtt/m/n/10 at javax.swing.plaf.synth.SynthPanelUI.installListene rs(SynthPanelUI.java:49)[] Overfull \hbox (59.24648pt too wide) in paragraph at lines 236--236 [] \OT1/cmtt/m/n/10 at javax.swing.plaf.synth.SynthPanelUI.installUI(Synt hPanelUI.java:38)[] Underfull \hbox (badness 10000) in paragraph at lines 245--247 Underfull \hbox (badness 10000) in paragraph at lines 248--249 Underfull \hbox (badness 10000) in paragraph at lines 250--251 Underfull \hbox (badness 10000) in paragraph at lines 252--253 Underfull \hbox (badness 10000) in paragraph at lines 255--256 [301] Underfull \hbox (badness 10000) in paragraph at lines 257--258 Overfull \hbox (9.16362pt too wide) in paragraph at lines 264--265 []\OT1/cmr/m/n/10 Java VM op-tions ([][][][]) ) (./bibliography.tex [302] Underfull \hbox (badness 3514) in paragraph at lines 31--35 []\OT1/cmr/m/it/10 Weka Ex-am-ples \OT1/cmr/m/n/10 -- A col-lec-tion of ex-am-p le classes, as part of Underfull \hbox (badness 5119) in paragraph at lines 31--35 \OT1/cmr/m/n/10 an ANT project, in-cluded in the WEKA snap-shots (avail-able Underfull \hbox (badness 10000) in paragraph at lines 31--35 \OT1/cmr/m/n/10 for down-load on the home-page) or di-rectly from sub-ver-sion Overfull \hbox (64.80228pt too wide) in paragraph at lines 31--35 [][][][] Underfull \vbox (badness 10000) has occurred while \output is active [303] Overfull \vbox (45.33775pt too high) has occurred while \output is active [304] Overfull \hbox (22.2144pt too wide) in paragraph at lines 103--106 []\OT1/cmr/m/n/9 Cozman. See [][][][] ) [305] (./manual.aux) ) (see the transcript file for additional information) Output written on manual.dvi (305 pages, 990772 bytes). Transcript written on manual.log. make[1]: Leaving directory '/build/reproducible-path/weka-3.6.14' dh_auto_test create-stamp debian/debhelper-build-stamp dh_prep debian/rules override_dh_auto_install make[1]: Entering directory '/build/reproducible-path/weka-3.6.14' install -m644 -D dist/weka.jar debian/weka/usr/share/java/weka-3.6.14.jar dh_link -pweka /usr/share/java/weka-3.6.14.jar /usr/share/java/weka.jar #main overview page install -m755 -d debian/weka-doc/usr/share/doc/weka-doc install -m644 documentation.css documentation.html weka.gif -t debian/weka-doc/usr/share/doc/weka-doc/ #javadoc cp -r doc debian/weka-doc/usr/share/doc/weka-doc/ #pdf's install -m644 wekadocs/manual/manual.pdf debian/weka-doc/usr/share/doc/weka-doc/WekaManual.pdf make[1]: Leaving directory '/build/reproducible-path/weka-3.6.14' dh_install dh_installdocs dh_installchangelogs dh_installexamples dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dpkg-gencontrol: warning: Depends field of package weka: substitution variable ${shlibs:Depends} used, but is not defined dh_md5sums dh_builddeb dpkg-deb: building package 'weka' in '../weka_3.6.14-4_all.deb'. dpkg-deb: building package 'weka-doc' in '../weka-doc_3.6.14-4_all.deb'. dpkg-genbuildinfo --build=binary -O../weka_3.6.14-4_i386.buildinfo dpkg-genchanges --build=binary -O../weka_3.6.14-4_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/62125 and its subdirectories I: Current time: Sun Oct 27 02:53:26 -12 2024 I: pbuilder-time-stamp: 1730040806 Sun Oct 27 14:53:27 UTC 2024 I: 1st build successful. Starting 2nd build on remote node ionos6-i386.debian.net. Sun Oct 27 14:53:27 UTC 2024 I: Preparing to do remote build '2' on ionos6-i386.debian.net. Sun Oct 27 14:58:44 UTC 2024 I: Deleting $TMPDIR on ionos6-i386.debian.net. Sun Oct 27 14:58:45 UTC 2024 I: weka_3.6.14-4_i386.changes: Format: 1.8 Date: Sun, 03 Dec 2023 23:16:40 -0800 Source: weka Binary: weka weka-doc Architecture: all Version: 3.6.14-4 Distribution: unstable Urgency: medium Maintainer: Debian Java Maintainers Changed-By: tony mancill Description: weka - Machine learning algorithms for data mining tasks weka-doc - documentation for the Weka machine learning suite Closes: 1046193 1053086 Changes: weka (3.6.14-4) unstable; urgency=medium . * Team upload. [ Vladimir Petko ] * d/p/set_compiler_release.patch, d/rules: use java_compat_level variable provided by java-common to adjust -release level (Closes: #1053086) . [ tony mancill ] * Update Homepage URL * Fix FTBFS twice in a row (Closes: #1046193) * Set Rules-Requires-Root: no in debian/control Checksums-Sha1: 7dbb20e4f9c536b668ed903589f327e774010779 5390260 weka-doc_3.6.14-4_all.deb 35491f0f75a181d464aece4ba3c24472f9985ecf 6715168 weka_3.6.14-4_all.deb ee95b58d7c1115a478feca72f64955088aef9257 11542 weka_3.6.14-4_i386.buildinfo Checksums-Sha256: 3dda2492c96e1baafc467e9c22048d2f454f9266cb615b6ba5fbd15d2c379080 5390260 weka-doc_3.6.14-4_all.deb d5cda82e19feacbed78a8fbd37201cde7e0300dc41619ef54a2175a22f876afa 6715168 weka_3.6.14-4_all.deb aea3a296ffee0f93097871dd0e60d606f75ecea2385286cf2a74df670a5abed0 11542 weka_3.6.14-4_i386.buildinfo Files: 51ef0475224a7ad65a83d0a891e83f74 5390260 doc optional weka-doc_3.6.14-4_all.deb b1418bd3d1ed4bfd8eaae91de776fad0 6715168 science optional weka_3.6.14-4_all.deb 42a9c635be255644970b0a4cb5565860 11542 science optional weka_3.6.14-4_i386.buildinfo Sun Oct 27 14:58:46 UTC 2024 I: diffoscope 282 will be used to compare the two builds: Running as unit: rb-diffoscope-i386_5-36727.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.g5YnNZVg/weka_3.6.14-4.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.g5YnNZVg/weka_3.6.14-4.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.g5YnNZVg/weka_3.6.14-4.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.g5YnNZVg/b1/weka_3.6.14-4_i386.changes /srv/reproducible-results/rbuild-debian/r-b-build.g5YnNZVg/b2/weka_3.6.14-4_i386.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.544s) 0.544s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.165s) 0.165s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 890ms CPU time consumed: 891ms Sun Oct 27 14:58:47 UTC 2024 I: diffoscope 282 found no differences in the changes files, and a .buildinfo file also exists. Sun Oct 27 14:58:47 UTC 2024 I: weka from trixie built successfully and reproducibly on i386. Sun Oct 27 14:58:49 UTC 2024 I: Submitting .buildinfo files to external archives: Sun Oct 27 14:58:49 UTC 2024 I: Submitting 16K b1/weka_3.6.14-4_i386.buildinfo.asc Sun Oct 27 14:58:50 UTC 2024 I: Submitting 16K b2/weka_3.6.14-4_i386.buildinfo.asc Sun Oct 27 14:58:51 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Sun Oct 27 14:58:51 UTC 2024 I: Done submitting .buildinfo files. Sun Oct 27 14:58:51 UTC 2024 I: Removing signed weka_3.6.14-4_i386.buildinfo.asc files: removed './b1/weka_3.6.14-4_i386.buildinfo.asc' removed './b2/weka_3.6.14-4_i386.buildinfo.asc'