Sat May 18 19:04:35 UTC 2024 I: starting to build q2-types/trixie/i386 on jenkins on '2024-05-18 19:04' Sat May 18 19:04:35 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_14/21715/console.log Sat May 18 19:04:35 UTC 2024 I: Downloading source for trixie/q2-types=2024.2.0-1 --2024-05-18 19:04:35-- http://deb.debian.org/debian/pool/main/q/q2-types/q2-types_2024.2.0-1.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2265 (2.2K) [text/prs.lines.tag] Saving to: ‘q2-types_2024.2.0-1.dsc’ 0K .. 100% 203M=0s 2024-05-18 19:04:35 (203 MB/s) - ‘q2-types_2024.2.0-1.dsc’ saved [2265/2265] Sat May 18 19:04:35 UTC 2024 I: q2-types_2024.2.0-1.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: q2-types Binary: q2-types Architecture: all Version: 2024.2.0-1 Maintainer: Debian Med Packaging Team Uploaders: Liubov Chuprikova , Étienne Mollier , Steffen Moeller Homepage: https://qiime2.org/ Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/q2-types Vcs-Git: https://salsa.debian.org/med-team/q2-types.git Testsuite: autopkgtest Testsuite-Triggers: python3-all, python3-pytest-cov Build-Depends: debhelper-compat (= 13), dh-sequence-python3, python3, python3-setuptools, python3-pytest-cov, python3-biom-format, python3-skbio, python3-ijson, python3-h5py, qiime (>= 2024.2) Package-List: q2-types deb science optional arch=all Checksums-Sha1: 0f077e1eeccbf89de48fa0d0756e71c6bacf7010 15448743 q2-types_2024.2.0.orig.tar.gz 1ea5630dee26aa32f7aad6e924766cf119b4282e 7540 q2-types_2024.2.0-1.debian.tar.xz Checksums-Sha256: 07c9381756f2a018a70ef800ee159e588c629e6f179b35c018aa308458098541 15448743 q2-types_2024.2.0.orig.tar.gz 2b71bf5cd56f2396f263ce99f1bb36f236b3a4075afc818e17fb8bb96403a852 7540 q2-types_2024.2.0-1.debian.tar.xz Files: bf758dddfea4defb673dd2b19366f114 15448743 q2-types_2024.2.0.orig.tar.gz a3a8b96abcba254a23a86830a3641445 7540 q2-types_2024.2.0-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmXR8bkRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtHXlhAAgIN0YSUz8cMjSiRRTYWAMSb0E3EexTRV 4ZZzvHFFNdVeGrkMW0LC3AeF81Aa6uhGTBzXg8cJU4Wl6cd/PiJXT0J1ZB7hllJQ m53retrkw5QniISinlbyi8WD/Y2p+vQAFSQOvdekYzp/b1ODq7GCznBCasLCjpSa FbR/NJfKYaU8Fe2Bdx4tAzySZBLnG6Oj07sqMFgryoXNNVT5BoSYunfuyQW8pGBr H6JepWhJBT8xs3UCL1ZVqwHx1/boozJbL3gXpO2BSAfPgs2gPavgRWoR/ysX8kT5 V8zJgUWNVMbeHraZYiRxJCZIKrIUrPc3RYMJLMxKBXzR5aNbEiZ1Kcg+OkaqGbWQ BrkRqiyF6L3X0l6iauS10CUJFjsydxlbAzn1oSurjsNUxwhudVonXSYKRnojd/ql ndE4Md1gDjMv0+FB7BfkJRpdsli1OESHh38n5KAOZ5JxIDKm/o59Zii7gpOYhutU tnsVYdDr5R+X23OoXaJlImyKWydYl0yY8bGezIwpHIyBXkZ628xECinzUA24cxrZ D88zlNAipjdmOoWrVdx5EtYxPtKQlNGXwAO7BjfNDSueai3IqVyGgALKR4WN9WNP CrFWTcRRou5CyqNbWxd8ec21HSIDL+1PCVsJ5zAxozM2A+LtlsgRasB3Ww8O8lw+ 9VVWyaYgoQE= =WtMH -----END PGP SIGNATURE----- Sat May 18 19:04:35 UTC 2024 I: Checking whether the package is not for us Sat May 18 19:04:35 UTC 2024 I: Starting 1st build on remote node infom08-i386.debian.net. Sat May 18 19:04:35 UTC 2024 I: Preparing to do remote build '1' on infom08-i386.debian.net. Sat May 18 19:04:49 UTC 2024 I: Deleting $TMPDIR on infom08-i386.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Fri Jun 20 13:27:36 -12 2025 I: pbuilder-time-stamp: 1750469256 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [q2-types_2024.2.0-1.dsc] I: copying [./q2-types_2024.2.0.orig.tar.gz] I: copying [./q2-types_2024.2.0-1.debian.tar.xz] I: Extracting source gpgv: Signature made Sun Feb 18 12:02:01 2024 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./q2-types_2024.2.0-1.dsc: no acceptable signature found dpkg-source: info: extracting q2-types in q2-types-2024.2.0 dpkg-source: info: unpacking q2-types_2024.2.0.orig.tar.gz dpkg-source: info: unpacking q2-types_2024.2.0-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying py.test-3.patch dpkg-source: info: applying pandas-2.0.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/23601/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=6 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='0fe2e358c6df477395c4d513a115af5c' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='23601' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.3lCCp4fx/pbuilderrc_iSci --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.3lCCp4fx/b1 --logfile b1/build.log q2-types_2024.2.0-1.dsc' SUDO_GID='111' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' I: uname -a Linux infom08-i386 6.6.13+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.6.13-1~bpo12+1 (2024-02-15) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Jun 19 21:18 /bin -> usr/bin I: user script /srv/workspace/pbuilder/23601/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-sequence-python3, python3, python3-setuptools, python3-pytest-cov, python3-biom-format, python3-skbio, python3-ijson, python3-h5py, qiime (>= 2024.2) dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19685 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on python3; however: Package python3 is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest-cov; however: Package python3-pytest-cov is not installed. pbuilder-satisfydepends-dummy depends on python3-biom-format; however: Package python3-biom-format is not installed. pbuilder-satisfydepends-dummy depends on python3-skbio; however: Package python3-skbio is not installed. pbuilder-satisfydepends-dummy depends on python3-ijson; however: Package python3-ijson is not installed. pbuilder-satisfydepends-dummy depends on python3-h5py; however: Package python3-h5py is not installed. pbuilder-satisfydepends-dummy depends on qiime (>= 2024.2); however: Package qiime is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} fonts-glyphicons-halflings{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} javascript-common{a} libaec0{a} libarchive-zip-perl{a} libblas3{a} libbrotli1{a} libbsd0{a} libcom-err2{a} libcurl4t64{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libgfortran5{a} libgssapi-krb5-2{a} libhdf5-103-1t64{a} libhdf5-hl-100t64{a} libicu72{a} libjs-bootstrap{a} libjs-jquery{a} libjs-jquery-hotkeys{a} libjs-jquery-isonscreen{a} libjs-jquery-metadata{a} libjs-jquery-tablesorter{a} libjs-jquery-throttle-debounce{a} libjs-popper.js{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} libldap-2.5-0{a} liblzf1{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libnorm1t64{a} libpgm-5.3-0t64{a} libpipeline1{a} libpsl5t64{a} libpython3-stdlib{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libreadline8t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsodium23{a} libssh2-1t64{a} libsub-override-perl{a} libsz2{a} libtool{a} libuchardet0{a} libxml2{a} libxslt1.1{a} libyajl2{a} libyaml-0-2{a} libzmq5{a} m4{a} man-db{a} media-types{a} netbase{a} node-fortawesome-fontawesome-free{a} openssl{a} po-debconf{a} python3{a} python3-appdirs{a} python3-bcrypt{a} python3-bibtexparser{a} python3-blinker{a} python3-certifi{a} python3-cffi-backend{a} python3-chardet{a} python3-charset-normalizer{a} python3-click{a} python3-colorama{a} python3-coverage{a} python3-cryptography{a} python3-dateutil{a} python3-decorator{a} python3-dill{a} python3-distutils{a} python3-filelock{a} python3-flask{a} python3-flask-sqlalchemy{a} python3-flufl.lock{a} python3-globus-sdk{a} python3-greenlet{a} python3-h5py{a} python3-h5py-serial{a} python3-idna{a} python3-ijson{a} python3-iniconfig{a} python3-itsdangerous{a} python3-jinja2{a} python3-jwt{a} python3-lib2to3{a} python3-lxml{a} python3-markupsafe{a} python3-minimal{a} python3-nacl{a} python3-networkx{a} python3-numpy{a} python3-packaging{a} python3-pandas{a} python3-pandas-lib{a} python3-paramiko{a} python3-parsl{a} python3-pkg-resources{a} python3-pluggy{a} python3-psutil{a} python3-public{a} python3-py{a} python3-pyparsing{a} python3-pytest{a} python3-pytest-cov{a} python3-requests{a} python3-setproctitle{a} python3-setuptools{a} python3-six{a} python3-sqlalchemy{a} python3-tblib{a} python3-tomlkit{a} python3-typeguard{a} python3-typing-extensions{a} python3-tz{a} python3-tzlocal{a} python3-urllib3{a} python3-werkzeug{a} python3-yaml{a} python3-zmq{a} python3.11{a} python3.11-minimal{a} python3.12{a} python3.12-minimal{a} qiime{a} readline-common{a} sensible-utils{a} tzdata{a} The following packages are RECOMMENDED but will NOT be installed: curl krb5-locales libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx node-jquery publicsuffix python3-asgiref python3-babel python3-bottleneck python3-bs4 python3-cssselect python3-dotenv python3-gdal python3-html5lib python3-invoke python3-matplotlib python3-numexpr python3-odf python3-openpyxl python3-openssl python3-pydot python3-pygments python3-pygraphviz python3-pyinotify python3-scipy python3-simplejson python3-sqlalchemy-ext python3-tables q2-feature-table q2-quality-filter q2-types q2cli q2templates r-cran-plotly wget 0 packages upgraded, 157 newly installed, 0 to remove and 0 not upgraded. Need to get 71.4 MB of archives. After unpacking 345 MB will be used. The following packages have unmet dependencies: pbuilder-satisfydepends-dummy : Depends: python3-biom-format which is a virtual package and is not provided by any available package Depends: python3-skbio which is a virtual package and is not provided by any available package Unable to resolve dependencies! Giving up... The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} fonts-glyphicons-halflings{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} javascript-common{a} libaec0{a} libarchive-zip-perl{a} libblas3{a} libbrotli1{a} libbsd0{a} libcom-err2{a} libcurl4t64{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libgfortran5{a} libgssapi-krb5-2{a} libhdf5-103-1t64{a} libhdf5-hl-100t64{a} libicu72{a} libjs-bootstrap{a} libjs-jquery{a} libjs-jquery-hotkeys{a} libjs-jquery-isonscreen{a} libjs-jquery-metadata{a} libjs-jquery-tablesorter{a} libjs-jquery-throttle-debounce{a} libjs-popper.js{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} libldap-2.5-0{a} liblzf1{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libnorm1t64{a} libpgm-5.3-0t64{a} libpipeline1{a} libpsl5t64{a} libpython3-stdlib{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libreadline8t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsodium23{a} libssh2-1t64{a} libsub-override-perl{a} libsz2{a} libtool{a} libuchardet0{a} libxml2{a} libxslt1.1{a} libyajl2{a} libyaml-0-2{a} libzmq5{a} m4{a} man-db{a} media-types{a} netbase{a} node-fortawesome-fontawesome-free{a} openssl{a} po-debconf{a} python3{a} python3-appdirs{a} python3-bcrypt{a} python3-bibtexparser{a} python3-blinker{a} python3-certifi{a} python3-cffi-backend{a} python3-chardet{a} python3-charset-normalizer{a} python3-click{a} python3-colorama{a} python3-coverage{a} python3-cryptography{a} python3-dateutil{a} python3-decorator{a} python3-dill{a} python3-distutils{a} python3-filelock{a} python3-flask{a} python3-flask-sqlalchemy{a} python3-flufl.lock{a} python3-globus-sdk{a} python3-greenlet{a} python3-h5py{a} python3-h5py-serial{a} python3-idna{a} python3-ijson{a} python3-iniconfig{a} python3-itsdangerous{a} python3-jinja2{a} python3-jwt{a} python3-lib2to3{a} python3-lxml{a} python3-markupsafe{a} python3-minimal{a} python3-nacl{a} python3-networkx{a} python3-numpy{a} python3-packaging{a} python3-pandas{a} python3-pandas-lib{a} python3-paramiko{a} python3-parsl{a} python3-pkg-resources{a} python3-pluggy{a} python3-psutil{a} python3-public{a} python3-py{a} python3-pyparsing{a} python3-pytest{a} python3-pytest-cov{a} python3-requests{a} python3-setproctitle{a} python3-setuptools{a} python3-six{a} python3-sqlalchemy{a} python3-tblib{a} python3-tomlkit{a} python3-typeguard{a} python3-typing-extensions{a} python3-tz{a} python3-tzlocal{a} python3-urllib3{a} python3-werkzeug{a} python3-yaml{a} python3-zmq{a} python3.11{a} python3.11-minimal{a} python3.12{a} python3.12-minimal{a} qiime{a} readline-common{a} sensible-utils{a} tzdata{a} The following packages are RECOMMENDED but will NOT be installed: curl krb5-locales libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx node-jquery publicsuffix python3-asgiref python3-babel python3-bottleneck python3-bs4 python3-cssselect python3-dotenv python3-gdal python3-html5lib python3-invoke python3-matplotlib python3-numexpr python3-odf python3-openpyxl python3-openssl python3-pydot python3-pygments python3-pygraphviz python3-pyinotify python3-scipy python3-simplejson python3-sqlalchemy-ext python3-tables q2-feature-table q2-quality-filter q2-types q2cli q2templates r-cran-plotly wget 0 packages upgraded, 157 newly installed, 0 to remove and 0 not upgraded. Need to get 71.4 MB of archives. After unpacking 345 MB will be used. Abort. E: pbuilder-satisfydepends failed. I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/23601 and its subdirectories Sat May 18 19:04:50 UTC 2024 W: No second build log, what happened? Sat May 18 19:04:50 UTC 2024 W: Downloading the build dependencies failed Sat May 18 19:04:50 UTC 2024 W: Maybe there was a network problem, or the build dependencies are currently uninstallable; consider filing a bug in the last case. Sat May 18 19:04:50 UTC 2024 W: Network problems are automatically rescheduled after some hours.