Thu Nov 7 23:59:55 UTC 2024 I: starting to build python-gsd/trixie/i386 on jenkins on '2024-11-07 23:59' Thu Nov 7 23:59:55 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_19/29086/console.log Thu Nov 7 23:59:55 UTC 2024 I: Downloading source for trixie/python-gsd=3.3.0-1 --2024-11-07 23:59:55-- http://deb.debian.org/debian/pool/main/p/python-gsd/python-gsd_3.3.0-1.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2495 (2.4K) [text/prs.lines.tag] Saving to: ‘python-gsd_3.3.0-1.dsc’ 0K .. 100% 308M=0s 2024-11-07 23:59:55 (308 MB/s) - ‘python-gsd_3.3.0-1.dsc’ saved [2495/2495] Thu Nov 7 23:59:55 UTC 2024 I: python-gsd_3.3.0-1.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: python-gsd Binary: python3-gsd, python-gsd-doc Architecture: any all Version: 3.3.0-1 Maintainer: Debichem Team Uploaders: Drew Parsons Homepage: https://gsd.readthedocs.io/ Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/debichem-team/python-gsd Vcs-Git: https://salsa.debian.org/debichem-team/python-gsd.git Testsuite: autopkgtest Testsuite-Triggers: python3-all, python3-pytest Build-Depends: debhelper-compat (= 13), cython3, dh-python, pybuild-plugin-pyproject, python3-setuptools, python3-all-dev, python3-ipython, python3-numpy (>= 1:1.19.0~), python3-pytest , python3-sphinx, architecture-properties, architecture-is-little-endian Build-Depends-Indep: python3-doc, doxygen , furo, libjs-mathjax , python3-breathe, python-numpy-doc , python3-pandas, python3-sphinx-rtd-theme , python3-sphinx-copybutton Package-List: python-gsd-doc deb doc optional arch=all python3-gsd deb python optional arch=any Checksums-Sha1: 468bd1ad8133f892344991aed1ae3c1135f57602 108597 python-gsd_3.3.0.orig.tar.gz 4bc88f58c532a6c9060c234b748d401d8d4db928 6116 python-gsd_3.3.0-1.debian.tar.xz Checksums-Sha256: 3b2f478cb0c6fa1f0d6651c3f14d9436a2082c7ee4d08b053ce121675cd3060b 108597 python-gsd_3.3.0.orig.tar.gz ee93055440813a1d1363d755a70bcdbda9e9af1dc591e8933cac5a2367f700d0 6116 python-gsd_3.3.0-1.debian.tar.xz Files: 8b1930019791ea559e314a0b7e849818 108597 python-gsd_3.3.0.orig.tar.gz a796d72250ea320bf029cb0e8a49b5d7 6116 python-gsd_3.3.0-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCAAdFiEEI8mpPlhYGekSbQo2Vz7x5L1aAfoFAmaIHvUACgkQVz7x5L1a AfqALg/+MwJLswjbkRsphfftxNYwrTotrEKnGqPZ0x9kCHFigOaonWPRYZjG1RmQ AUr4L7ryY9Y0gnq3nVfPqxBonBbcjPjJCnVvGklFmAnHPQ+qzPAtDtEn4qFojpAr G1hOi4Hh4+7ip7/MWc92w3mTFtSnOGqKIWdReP3Cnn/0chCowZ9dtZIarc0/+uEB 0fufFSinVULeUszuVoBS3hjZJQhubNXNCp1dgzp2xGFxCm9zpxllgYba7Y/kJPQA /Q61ORDkNfhT3A6ugVupm8laYUGQEodyZyF0oiPf46vW2N7dgnLk6g9lDaDGtRwt PIZcfpK2hQfulCU+BCvBgJfttQ8QeyC2h+voKrtIyVxexqm1knhSw0h1/rKINI10 5oi/QVfRhknguBWw90bYVj9ZYYYc/D69DRkfBeTR/kQunI192/+Bpu1ZsqgsMSiA P6zPAP5HVDCrw7o+c6pIcAOo7WRCt/38dAXoKJN/iANfdvMKCnaXN/DVValwzXXZ B8DDHhA9Jps38OR8GwbWvpxAsVrS8jzwwCiJU6tTyHFU4oNJSwUqnSAnGXFtD+uv v8cfw7CbxN+pruwl0yX5vS4q+pL/e5zqN+MGx7BA5gArzSSJIi75S6DbWQASMcmw C8AN9AWG0EBkmnY3Buq7qxAPWoBbigHMyXVRJL4CEmLwY+AREVk= =oWxK -----END PGP SIGNATURE----- Thu Nov 7 23:59:55 UTC 2024 I: Checking whether the package is not for us Thu Nov 7 23:59:55 UTC 2024 I: Starting 1st build on remote node infom07-i386.debian.net. Thu Nov 7 23:59:55 UTC 2024 I: Preparing to do remote build '1' on infom07-i386.debian.net. Fri Nov 8 00:07:37 UTC 2024 I: Deleting $TMPDIR on infom07-i386.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Thu Nov 7 12:00:02 -12 2024 I: pbuilder-time-stamp: 1731024002 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [python-gsd_3.3.0-1.dsc] I: copying [./python-gsd_3.3.0.orig.tar.gz] I: copying [./python-gsd_3.3.0-1.debian.tar.xz] I: Extracting source gpgv: Signature made Fri Jul 5 16:27:33 2024 gpgv: using RSA key 23C9A93E585819E9126D0A36573EF1E4BD5A01FA gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./python-gsd_3.3.0-1.dsc: no acceptable signature found dpkg-source: info: extracting python-gsd in python-gsd-3.3.0 dpkg-source: info: unpacking python-gsd_3.3.0.orig.tar.gz dpkg-source: info: unpacking python-gsd_3.3.0-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying docs_local_scripts.patch dpkg-source: info: applying test_large_32bit.patch dpkg-source: info: applying doc_ignore_exceptions.patch dpkg-source: info: applying docs_build.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/22113/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=6 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='500075b0bbaa4963b091242ab6d61d18' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='22113' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.Wv4y1wp2/pbuilderrc_46ub --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.Wv4y1wp2/b1 --logfile b1/build.log python-gsd_3.3.0-1.dsc' SUDO_GID='111' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' I: uname -a Linux infom07-i386 6.1.0-26-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.112-1 (2024-09-30) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/22113/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), cython3, dh-python, pybuild-plugin-pyproject, python3-setuptools, python3-all-dev, python3-ipython, python3-numpy (>= 1:1.19.0~), python3-pytest, python3-sphinx, architecture-properties, architecture-is-little-endian, python3-doc, doxygen, furo, libjs-mathjax, python3-breathe, python-numpy-doc, python3-pandas, python3-sphinx-rtd-theme, python3-sphinx-copybutton dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19956 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on cython3; however: Package cython3 is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on pybuild-plugin-pyproject; however: Package pybuild-plugin-pyproject is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-all-dev; however: Package python3-all-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-ipython; however: Package python3-ipython is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy (>= 1:1.19.0~); however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx; however: Package python3-sphinx is not installed. pbuilder-satisfydepends-dummy depends on architecture-properties; however: Package architecture-properties is not installed. pbuilder-satisfydepends-dummy depends on architecture-is-little-endian; however: Package architecture-is-little-endian is not installed. pbuilder-satisfydepends-dummy depends on python3-doc; however: Package python3-doc is not installed. pbuilder-satisfydepends-dummy depends on doxygen; however: Package doxygen is not installed. pbuilder-satisfydepends-dummy depends on furo; however: Package furo is not installed. pbuilder-satisfydepends-dummy depends on libjs-mathjax; however: Package libjs-mathjax is not installed. pbuilder-satisfydepends-dummy depends on python3-breathe; however: Package python3-breathe is not installed. pbuilder-satisfydepends-dummy depends on python-numpy-doc; however: Package python-numpy-doc is not installed. pbuilder-satisfydepends-dummy depends on python3-pandas; however: Package python3-pandas is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx-rtd-theme; however: Package python3-sphinx-rtd-theme is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx-copybutton; however: Package python3-sphinx-copybutton is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: architecture-properties{a} autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} cython3{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} docutils-common{a} doxygen{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-font-awesome{a} fonts-lato{a} fonts-mathjax{a} furo{a} gettext{a} gettext-base{a} graphviz{a} groff-base{a} intltool-debian{a} libabsl20230802{a} libaom3{a} libarchive-zip-perl{a} libavif16{a} libblas3{a} libbrotli1{a} libcairo2{a} libcdt5{a} libcgraph6{a} libclang-cpp19{a} libclang1-19{a} libcom-err2{a} libdatrie1{a} libdav1d7{a} libde265-0{a} libdebhelper-perl{a} libdeflate0{a} libedit2{a} libelf1t64{a} libexpat1{a} libexpat1-dev{a} libfile-stripnondeterminism-perl{a} libfmt9{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgav1-1{a} libgd3{a} libgfortran5{a} libglib2.0-0t64{a} libgraphite2-3{a} libgssapi-krb5-2{a} libgts-0.7-5t64{a} libgvc6{a} libgvpr2{a} libharfbuzz0b{a} libheif-plugin-dav1d{a} libheif-plugin-libde265{a} libheif1{a} libice6{a} libicu72{a} libimagequant0{a} libjbig0{a} libjpeg62-turbo{a} libjs-jquery{a} libjs-mathjax{a} libjs-sphinxdoc{a} libjs-underscore{a} libjson-perl{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblab-gamut1{a} liblapack3{a} liblerc4{a} libllvm19{a} libltdl7{a} libmagic-mgc{a} libmagic1t64{a} libnsl2{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpathplan4{a} libpipeline1{a} libpixman-1-0{a} libpng16-16t64{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.12-dev{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.12t64{a} libraqm0{a} librav1e0.7{a} libreadline8t64{a} libsharpyuv0{a} libsm6{a} libsvtav1enc2{a} libthai-data{a} libthai0{a} libtiff6{a} libtirpc-common{a} libtirpc3t64{a} libtool{a} libuchardet0{a} libwebp7{a} libx11-6{a} libx11-data{a} libxau6{a} libxaw7{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxml2{a} libxmu6{a} libxpm4{a} libxrender1{a} libxt6t64{a} libyuv0{a} libz3-4{a} m4{a} man-db{a} media-types{a} netbase{a} openssl{a} po-debconf{a} pybuild-plugin-pyproject{a} python-babel-localedata{a} python-numpy-doc{a} python3{a} python3-alabaster{a} python3-all{a} python3-all-dev{a} python3-asttokens{a} python3-autocommand{a} python3-babel{a} python3-breathe{a} python3-bs4{a} python3-build{a} python3-certifi{a} python3-chardet{a} python3-charset-normalizer{a} python3-dateutil{a} python3-decorator{a} python3-defusedxml{a} python3-dev{a} python3-doc{a} python3-docutils{a} python3-executing{a} python3-idna{a} python3-imagesize{a} python3-inflect{a} python3-iniconfig{a} python3-installer{a} python3-ipython{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jedi{a} python3-jinja2{a} python3-markupsafe{a} python3-matplotlib-inline{a} python3-minimal{a} python3-more-itertools{a} python3-numpy{a} python3-packaging{a} python3-pandas{a} python3-pandas-lib{a} python3-parso{a} python3-pexpect{a} python3-pkg-resources{a} python3-pluggy{a} python3-prompt-toolkit{a} python3-ptyprocess{a} python3-pure-eval{a} python3-pygments{a} python3-pyproject-hooks{a} python3-pytest{a} python3-requests{a} python3-roman{a} python3-setuptools{a} python3-snowballstemmer{a} python3-soupsieve{a} python3-sphinx{a} python3-sphinx-copybutton{a} python3-sphinx-rtd-theme{a} python3-sphinxcontrib.jquery{a} python3-stack-data{a} python3-toml{a} python3-traitlets{a} python3-typeguard{a} python3-typeshed{a} python3-typing-extensions{a} python3-tz{a} python3-urllib3{a} python3-wcwidth{a} python3-wheel{a} python3-zipp{a} python3.12{a} python3.12-dev{a} python3.12-doc{a} python3.12-minimal{a} readline-common{a} sensible-utils{a} sgml-base{a} sphinx-basic-ng{a} sphinx-common{a} sphinx-rtd-theme-common{a} tzdata{a} x11-common{a} xml-core{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl fonts-liberation javascript-common krb5-locales libarchive-cpio-perl libglib2.0-data libgts-bin libheif-plugin-aomenc libheif-plugin-x265 libjson-xs-perl libltdl-dev libmail-sendmail-perl libpaper-utils lynx python3-bottleneck python3-html5lib python3-lxml python3-matplotlib python3-numexpr python3-odf python3-openpyxl python3-pil python3-scipy python3-tables shared-mime-info wget xdg-user-dirs 0 packages upgraded, 225 newly installed, 0 to remove and 0 not upgraded. Need to get 194 MB of archives. After unpacking 916 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main i386 fonts-lato all 2.015-1 [2780 kB] Get: 2 http://deb.debian.org/debian trixie/main i386 libpython3.12-minimal i386 3.12.6-1 [813 kB] Get: 3 http://deb.debian.org/debian trixie/main i386 libexpat1 i386 2.6.3-2 [107 kB] Get: 4 http://deb.debian.org/debian trixie/main i386 python3.12-minimal i386 3.12.6-1 [2242 kB] Get: 5 http://deb.debian.org/debian trixie/main i386 python3-minimal i386 3.12.6-1 [26.7 kB] Get: 6 http://deb.debian.org/debian trixie/main i386 media-types all 10.1.0 [26.9 kB] Get: 7 http://deb.debian.org/debian trixie/main i386 netbase all 6.4 [12.8 kB] Get: 8 http://deb.debian.org/debian trixie/main i386 tzdata all 2024a-4 [255 kB] Get: 9 http://deb.debian.org/debian trixie/main i386 libkrb5support0 i386 1.21.3-3 [34.9 kB] Get: 10 http://deb.debian.org/debian trixie/main i386 libcom-err2 i386 1.47.1-1+b1 [23.4 kB] Get: 11 http://deb.debian.org/debian trixie/main i386 libk5crypto3 i386 1.21.3-3 [83.6 kB] Get: 12 http://deb.debian.org/debian trixie/main i386 libkeyutils1 i386 1.6.3-4 [9600 B] Get: 13 http://deb.debian.org/debian trixie/main i386 libkrb5-3 i386 1.21.3-3 [350 kB] Get: 14 http://deb.debian.org/debian trixie/main i386 libgssapi-krb5-2 i386 1.21.3-3 [146 kB] Get: 15 http://deb.debian.org/debian trixie/main i386 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get: 16 http://deb.debian.org/debian trixie/main i386 libtirpc3t64 i386 1.3.4+ds-1.3+b1 [90.5 kB] Get: 17 http://deb.debian.org/debian trixie/main i386 libnsl2 i386 1.3.0-3+b3 [42.7 kB] Get: 18 http://deb.debian.org/debian trixie/main i386 readline-common all 8.2-5 [69.3 kB] Get: 19 http://deb.debian.org/debian trixie/main i386 libreadline8t64 i386 8.2-5 [173 kB] Get: 20 http://deb.debian.org/debian trixie/main i386 libpython3.12-stdlib i386 3.12.6-1 [1961 kB] Get: 21 http://deb.debian.org/debian trixie/main i386 python3.12 i386 3.12.6-1 [669 kB] Get: 22 http://deb.debian.org/debian trixie/main i386 libpython3-stdlib i386 3.12.6-1 [9692 B] Get: 23 http://deb.debian.org/debian trixie/main i386 python3 i386 3.12.6-1 [27.8 kB] Get: 24 http://deb.debian.org/debian trixie/main i386 sgml-base all 1.31 [15.4 kB] Get: 25 http://deb.debian.org/debian trixie/main i386 sensible-utils all 0.0.24 [24.8 kB] Get: 26 http://deb.debian.org/debian trixie/main i386 openssl i386 3.3.2-2 [1387 kB] Get: 27 http://deb.debian.org/debian trixie/main i386 ca-certificates all 20240203 [158 kB] Get: 28 http://deb.debian.org/debian trixie/main i386 libmagic-mgc i386 1:5.45-3+b1 [314 kB] Get: 29 http://deb.debian.org/debian trixie/main i386 libmagic1t64 i386 1:5.45-3+b1 [115 kB] Get: 30 http://deb.debian.org/debian trixie/main i386 file i386 1:5.45-3+b1 [43.2 kB] Get: 31 http://deb.debian.org/debian trixie/main i386 gettext-base i386 0.22.5-2 [201 kB] Get: 32 http://deb.debian.org/debian trixie/main i386 libuchardet0 i386 0.0.8-1+b2 [69.2 kB] Get: 33 http://deb.debian.org/debian trixie/main i386 groff-base i386 1.23.0-5 [1196 kB] Get: 34 http://deb.debian.org/debian trixie/main i386 bsdextrautils i386 2.40.2-9 [102 kB] Get: 35 http://deb.debian.org/debian trixie/main i386 libpipeline1 i386 1.5.8-1 [41.2 kB] Get: 36 http://deb.debian.org/debian trixie/main i386 man-db i386 2.13.0-1 [1428 kB] Get: 37 http://deb.debian.org/debian trixie/main i386 architecture-properties i386 0.2.3 [2188 B] Get: 38 http://deb.debian.org/debian trixie/main i386 m4 i386 1.4.19-4 [293 kB] Get: 39 http://deb.debian.org/debian trixie/main i386 autoconf all 2.72-3 [493 kB] Get: 40 http://deb.debian.org/debian trixie/main i386 autotools-dev all 20220109.1 [51.6 kB] Get: 41 http://deb.debian.org/debian trixie/main i386 automake all 1:1.16.5-1.3 [823 kB] Get: 42 http://deb.debian.org/debian trixie/main i386 autopoint all 0.22.5-2 [723 kB] Get: 43 http://deb.debian.org/debian trixie/main i386 cython3 i386 3.0.11+dfsg-1 [2429 kB] Get: 44 http://deb.debian.org/debian trixie/main i386 libdebhelper-perl all 13.20 [89.7 kB] Get: 45 http://deb.debian.org/debian trixie/main i386 libtool all 2.4.7-8 [517 kB] Get: 46 http://deb.debian.org/debian trixie/main i386 dh-autoreconf all 20 [17.1 kB] Get: 47 http://deb.debian.org/debian trixie/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 48 http://deb.debian.org/debian trixie/main i386 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 49 http://deb.debian.org/debian trixie/main i386 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 50 http://deb.debian.org/debian trixie/main i386 libelf1t64 i386 0.192-4 [195 kB] Get: 51 http://deb.debian.org/debian trixie/main i386 dwz i386 0.15-1+b1 [116 kB] Get: 52 http://deb.debian.org/debian trixie/main i386 libicu72 i386 72.1-5+b1 [9583 kB] Get: 53 http://deb.debian.org/debian trixie/main i386 libxml2 i386 2.12.7+dfsg+really2.9.14-0.1 [733 kB] Get: 54 http://deb.debian.org/debian trixie/main i386 gettext i386 0.22.5-2 [1631 kB] Get: 55 http://deb.debian.org/debian trixie/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 56 http://deb.debian.org/debian trixie/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 57 http://deb.debian.org/debian trixie/main i386 debhelper all 13.20 [915 kB] Get: 58 http://deb.debian.org/debian trixie/main i386 python3-autocommand all 2.2.2-3 [13.6 kB] Get: 59 http://deb.debian.org/debian trixie/main i386 python3-more-itertools all 10.5.0-1 [63.8 kB] Get: 60 http://deb.debian.org/debian trixie/main i386 python3-typing-extensions all 4.12.2-2 [73.0 kB] Get: 61 http://deb.debian.org/debian trixie/main i386 python3-typeguard all 4.4.1-1 [37.0 kB] Get: 62 http://deb.debian.org/debian trixie/main i386 python3-inflect all 7.3.1-2 [32.4 kB] Get: 63 http://deb.debian.org/debian trixie/main i386 python3-jaraco.context all 6.0.0-1 [7984 B] Get: 64 http://deb.debian.org/debian trixie/main i386 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 65 http://deb.debian.org/debian trixie/main i386 python3-pkg-resources all 74.1.2-2 [213 kB] Get: 66 http://deb.debian.org/debian trixie/main i386 python3-zipp all 3.20.2-1 [10.3 kB] Get: 67 http://deb.debian.org/debian trixie/main i386 python3-setuptools all 74.1.2-2 [736 kB] Get: 68 http://deb.debian.org/debian trixie/main i386 dh-python all 6.20241024 [109 kB] Get: 69 http://deb.debian.org/debian trixie/main i386 xml-core all 0.19 [20.1 kB] Get: 70 http://deb.debian.org/debian trixie/main i386 docutils-common all 0.21.2+dfsg-2 [128 kB] Get: 71 http://deb.debian.org/debian trixie/main i386 libedit2 i386 3.1-20240808-1 [98.0 kB] Get: 72 http://deb.debian.org/debian trixie/main i386 libz3-4 i386 4.13.3-1 [9211 kB] Get: 73 http://deb.debian.org/debian trixie/main i386 libllvm19 i386 1:19.1.3-1 [30.4 MB] Get: 74 http://deb.debian.org/debian trixie/main i386 libclang-cpp19 i386 1:19.1.3-1 [15.5 MB] Get: 75 http://deb.debian.org/debian trixie/main i386 libclang1-19 i386 1:19.1.3-1 [8998 kB] Get: 76 http://deb.debian.org/debian trixie/main i386 libfmt9 i386 9.1.0+ds1-2 [119 kB] Get: 77 http://deb.debian.org/debian trixie/main i386 doxygen i386 1.9.8+ds-2+b2 [5252 kB] Get: 78 http://deb.debian.org/debian trixie/main i386 libbrotli1 i386 1.1.0-2+b5 [298 kB] Get: 79 http://deb.debian.org/debian trixie/main i386 libpng16-16t64 i386 1.6.44-2 [288 kB] Get: 80 http://deb.debian.org/debian trixie/main i386 libfreetype6 i386 2.13.3+dfsg-1 [464 kB] Get: 81 http://deb.debian.org/debian trixie/main i386 fonts-dejavu-mono all 2.37-8 [489 kB] Get: 82 http://deb.debian.org/debian trixie/main i386 fonts-dejavu-core all 2.37-8 [840 kB] Get: 83 http://deb.debian.org/debian trixie/main i386 fontconfig-config i386 2.15.0-1.1+b1 [318 kB] Get: 84 http://deb.debian.org/debian trixie/main i386 libfontconfig1 i386 2.15.0-1.1+b1 [402 kB] Get: 85 http://deb.debian.org/debian trixie/main i386 fontconfig i386 2.15.0-1.1+b1 [463 kB] Get: 86 http://deb.debian.org/debian trixie/main i386 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [517 kB] Get: 87 http://deb.debian.org/debian trixie/main i386 fonts-mathjax all 2.7.9+dfsg-1 [2210 kB] Get: 88 http://deb.debian.org/debian trixie/main i386 python3-soupsieve all 2.6-1 [38.3 kB] Get: 89 http://deb.debian.org/debian trixie/main i386 python3-bs4 all 4.12.3-3 [133 kB] Get: 90 http://deb.debian.org/debian trixie/main i386 python3-pygments all 2.18.0+dfsg-1 [836 kB] Get: 91 http://deb.debian.org/debian trixie/main i386 python3-defusedxml all 0.7.1-2 [43.3 kB] Get: 92 http://deb.debian.org/debian trixie/main i386 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 93 http://deb.debian.org/debian trixie/main i386 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 94 http://deb.debian.org/debian trixie/main i386 libjs-sphinxdoc all 7.4.7-4 [158 kB] Get: 95 http://deb.debian.org/debian trixie/main i386 libjson-perl all 4.10000-1 [87.5 kB] Get: 96 http://deb.debian.org/debian trixie/main i386 sphinx-common all 7.4.7-4 [731 kB] Get: 97 http://deb.debian.org/debian trixie/main i386 python3-alabaster all 0.7.16-0.1 [27.9 kB] Get: 98 http://deb.debian.org/debian trixie/main i386 python-babel-localedata all 2.14.0-1 [5701 kB] Get: 99 http://deb.debian.org/debian trixie/main i386 python3-tz all 2024.1-2 [30.9 kB] Get: 100 http://deb.debian.org/debian trixie/main i386 python3-babel all 2.14.0-1 [111 kB] Get: 101 http://deb.debian.org/debian trixie/main i386 python3-roman all 4.2-1 [10.4 kB] Get: 102 http://deb.debian.org/debian trixie/main i386 python3-docutils all 0.21.2+dfsg-2 [403 kB] Get: 103 http://deb.debian.org/debian trixie/main i386 python3-imagesize all 1.4.1-1 [6688 B] Get: 104 http://deb.debian.org/debian trixie/main i386 python3-markupsafe i386 2.1.5-1+b1 [13.7 kB] Get: 105 http://deb.debian.org/debian trixie/main i386 python3-jinja2 all 3.1.3-1 [119 kB] Get: 106 http://deb.debian.org/debian trixie/main i386 python3-packaging all 24.1-1 [45.8 kB] Get: 107 http://deb.debian.org/debian trixie/main i386 python3-certifi all 2024.8.30+dfsg-1 [9576 B] Get: 108 http://deb.debian.org/debian trixie/main i386 python3-charset-normalizer i386 3.4.0-1 [120 kB] Get: 109 http://deb.debian.org/debian trixie/main i386 python3-idna all 3.8-2 [41.6 kB] Get: 110 http://deb.debian.org/debian trixie/main i386 python3-urllib3 all 2.0.7-2 [111 kB] Get: 111 http://deb.debian.org/debian trixie/main i386 python3-chardet all 5.2.0+dfsg-1 [107 kB] Get: 112 http://deb.debian.org/debian trixie/main i386 python3-requests all 2.32.3+dfsg-1 [71.9 kB] Get: 113 http://deb.debian.org/debian trixie/main i386 python3-snowballstemmer all 2.2.0-4 [58.0 kB] Get: 114 http://deb.debian.org/debian trixie/main i386 python3-sphinx all 7.4.7-4 [588 kB] Get: 115 http://deb.debian.org/debian trixie/main i386 sphinx-basic-ng all 1.0.0~beta2-1 [13.0 kB] Get: 116 http://deb.debian.org/debian trixie/main i386 furo all 2024.08.06+dfsg-1 [62.8 kB] Get: 117 http://deb.debian.org/debian trixie/main i386 libcdt5 i386 2.42.4-2+b1 [40.9 kB] Get: 118 http://deb.debian.org/debian trixie/main i386 libcgraph6 i386 2.42.4-2+b1 [68.2 kB] Get: 119 http://deb.debian.org/debian trixie/main i386 libaom3 i386 3.10.0-1 [1918 kB] Get: 120 http://deb.debian.org/debian trixie/main i386 libdav1d7 i386 1.5.0-1+b1 [327 kB] Get: 121 http://deb.debian.org/debian trixie/main i386 libabsl20230802 i386 20230802.1-4 [521 kB] Get: 122 http://deb.debian.org/debian trixie/main i386 libgav1-1 i386 0.19.0-2+b2 [326 kB] Get: 123 http://deb.debian.org/debian trixie/main i386 librav1e0.7 i386 0.7.1-7+b2 [667 kB] Get: 124 http://deb.debian.org/debian trixie/main i386 libsvtav1enc2 i386 2.2.1+dfsg-2 [1040 kB] Get: 125 http://deb.debian.org/debian trixie/main i386 libjpeg62-turbo i386 1:2.1.5-3+b1 [171 kB] Get: 126 http://deb.debian.org/debian trixie/main i386 libyuv0 i386 0.0.1888.20240710-3+b1 [110 kB] Get: 127 http://deb.debian.org/debian trixie/main i386 libavif16 i386 1.1.1-1 [124 kB] Get: 128 http://deb.debian.org/debian trixie/main i386 libsharpyuv0 i386 1.4.0-0.1+b1 [113 kB] Get: 129 http://deb.debian.org/debian trixie/main i386 libheif-plugin-dav1d i386 1.19.1-1 [11.4 kB] Get: 130 http://deb.debian.org/debian trixie/main i386 libde265-0 i386 1.0.15-1+b2 [199 kB] Get: 131 http://deb.debian.org/debian trixie/main i386 libheif-plugin-libde265 i386 1.19.1-1 [15.6 kB] Get: 132 http://deb.debian.org/debian trixie/main i386 libheif1 i386 1.19.1-1 [514 kB] Get: 133 http://deb.debian.org/debian trixie/main i386 libimagequant0 i386 2.18.0-1+b2 [36.0 kB] Get: 134 http://deb.debian.org/debian trixie/main i386 libfribidi0 i386 1.0.15-1 [72.4 kB] Get: 135 http://deb.debian.org/debian trixie/main i386 libglib2.0-0t64 i386 2.82.2-2 [1570 kB] Get: 136 http://deb.debian.org/debian trixie/main i386 libgraphite2-3 i386 1.3.14-2+b1 [77.8 kB] Get: 137 http://deb.debian.org/debian trixie/main i386 libharfbuzz0b i386 10.0.1-1 [503 kB] Get: 138 http://deb.debian.org/debian trixie/main i386 libraqm0 i386 0.10.1-1+b2 [14.8 kB] Get: 139 http://deb.debian.org/debian trixie/main i386 libdeflate0 i386 1.22-1 [48.1 kB] Get: 140 http://deb.debian.org/debian trixie/main i386 libjbig0 i386 2.1-6.1+b2 [32.2 kB] Get: 141 http://deb.debian.org/debian trixie/main i386 liblerc4 i386 4.0.0+ds-5 [191 kB] Get: 142 http://deb.debian.org/debian trixie/main i386 libwebp7 i386 1.4.0-0.1+b1 [322 kB] Get: 143 http://deb.debian.org/debian trixie/main i386 libtiff6 i386 4.5.1+git230720-5 [339 kB] Get: 144 http://deb.debian.org/debian trixie/main i386 libxau6 i386 1:1.0.11-1 [20.7 kB] Get: 145 http://deb.debian.org/debian trixie/main i386 libxdmcp6 i386 1:1.1.2-3+b2 [24.9 kB] Get: 146 http://deb.debian.org/debian trixie/main i386 libxcb1 i386 1.17.0-2+b1 [148 kB] Get: 147 http://deb.debian.org/debian trixie/main i386 libx11-data all 2:1.8.7-1 [328 kB] Get: 148 http://deb.debian.org/debian trixie/main i386 libx11-6 i386 2:1.8.7-1+b2 [823 kB] Get: 149 http://deb.debian.org/debian trixie/main i386 libxpm4 i386 1:3.5.17-1+b2 [58.3 kB] Get: 150 http://deb.debian.org/debian trixie/main i386 libgd3 i386 2.3.3-12+b1 [131 kB] Get: 151 http://deb.debian.org/debian trixie/main i386 libgts-0.7-5t64 i386 0.7.6+darcs121130-5.2+b1 [160 kB] Get: 152 http://deb.debian.org/debian trixie/main i386 libpixman-1-0 i386 0.42.2-1+b1 [555 kB] Get: 153 http://deb.debian.org/debian trixie/main i386 libxcb-render0 i386 1.17.0-2+b1 [116 kB] Get: 154 http://deb.debian.org/debian trixie/main i386 libxcb-shm0 i386 1.17.0-2+b1 [105 kB] Get: 155 http://deb.debian.org/debian trixie/main i386 libxext6 i386 2:1.3.4-1+b2 [52.6 kB] Get: 156 http://deb.debian.org/debian trixie/main i386 libxrender1 i386 1:0.9.10-1.1+b2 [28.9 kB] Get: 157 http://deb.debian.org/debian trixie/main i386 libcairo2 i386 1.18.2-2 [591 kB] Get: 158 http://deb.debian.org/debian trixie/main i386 libltdl7 i386 2.4.7-8 [395 kB] Get: 159 http://deb.debian.org/debian trixie/main i386 libthai-data all 0.1.29-2 [168 kB] Get: 160 http://deb.debian.org/debian trixie/main i386 libdatrie1 i386 0.2.13-3+b1 [39.9 kB] Get: 161 http://deb.debian.org/debian trixie/main i386 libthai0 i386 0.1.29-2+b1 [50.3 kB] Get: 162 http://deb.debian.org/debian trixie/main i386 libpango-1.0-0 i386 1.54.0+ds-3 [230 kB] Get: 163 http://deb.debian.org/debian trixie/main i386 libpangoft2-1.0-0 i386 1.54.0+ds-3 [58.1 kB] Get: 164 http://deb.debian.org/debian trixie/main i386 libpangocairo-1.0-0 i386 1.54.0+ds-3 [36.1 kB] Get: 165 http://deb.debian.org/debian trixie/main i386 libpathplan4 i386 2.42.4-2+b1 [42.8 kB] Get: 166 http://deb.debian.org/debian trixie/main i386 libgvc6 i386 2.42.4-2+b1 [717 kB] Get: 167 http://deb.debian.org/debian trixie/main i386 libgvpr2 i386 2.42.4-2+b1 [203 kB] Get: 168 http://deb.debian.org/debian trixie/main i386 liblab-gamut1 i386 2.42.4-2+b1 [198 kB] Get: 169 http://deb.debian.org/debian trixie/main i386 x11-common all 1:7.7+23.1 [216 kB] Get: 170 http://deb.debian.org/debian trixie/main i386 libice6 i386 2:1.1.1-1 [67.8 kB] Get: 171 http://deb.debian.org/debian trixie/main i386 libsm6 i386 2:1.2.4-1 [35.9 kB] Get: 172 http://deb.debian.org/debian trixie/main i386 libxt6t64 i386 1:1.2.1-1.2+b1 [193 kB] Get: 173 http://deb.debian.org/debian trixie/main i386 libxmu6 i386 2:1.1.3-3+b3 [60.9 kB] Get: 174 http://deb.debian.org/debian trixie/main i386 libxaw7 i386 2:1.0.16-1 [220 kB] Get: 175 http://deb.debian.org/debian trixie/main i386 graphviz i386 2.42.4-2+b1 [581 kB] Get: 176 http://deb.debian.org/debian trixie/main i386 libblas3 i386 3.12.0-3+b1 [143 kB] Get: 177 http://deb.debian.org/debian trixie/main i386 libexpat1-dev i386 2.6.3-2 [165 kB] Get: 178 http://deb.debian.org/debian trixie/main i386 libgfortran5 i386 14.2.0-6 [735 kB] Get: 179 http://deb.debian.org/debian trixie/main i386 libjs-mathjax all 2.7.9+dfsg-1 [5667 kB] Get: 180 http://deb.debian.org/debian trixie/main i386 liblapack3 i386 3.12.0-3+b1 [2196 kB] Get: 181 http://deb.debian.org/debian trixie/main i386 libpython3.12t64 i386 3.12.6-1 [2168 kB] Get: 182 http://deb.debian.org/debian trixie/main i386 zlib1g-dev i386 1:1.3.dfsg+really1.3.1-1+b1 [916 kB] Get: 183 http://deb.debian.org/debian trixie/main i386 libpython3.12-dev i386 3.12.6-1 [5284 kB] Get: 184 http://deb.debian.org/debian trixie/main i386 libpython3-dev i386 3.12.6-1 [9956 B] Get: 185 http://deb.debian.org/debian trixie/main i386 libpython3-all-dev i386 3.12.6-1 [1068 B] Get: 186 http://deb.debian.org/debian trixie/main i386 python3-pyproject-hooks all 1.2.0-1 [11.7 kB] Get: 187 http://deb.debian.org/debian trixie/main i386 python3-toml all 0.10.2-1 [16.2 kB] Get: 188 http://deb.debian.org/debian trixie/main i386 python3-wheel all 0.44.0-2 [53.4 kB] Get: 189 http://deb.debian.org/debian trixie/main i386 python3-build all 1.2.2-1 [36.0 kB] Get: 190 http://deb.debian.org/debian trixie/main i386 python3-installer all 0.7.0+dfsg1-3 [18.6 kB] Get: 191 http://deb.debian.org/debian trixie/main i386 pybuild-plugin-pyproject all 6.20241024 [11.4 kB] Get: 192 http://deb.debian.org/debian trixie/main i386 python-numpy-doc all 1:1.26.4+ds-11 [9384 kB] Get: 193 http://deb.debian.org/debian trixie/main i386 python3-all i386 3.12.6-1 [1040 B] Get: 194 http://deb.debian.org/debian trixie/main i386 python3.12-dev i386 3.12.6-1 [506 kB] Get: 195 http://deb.debian.org/debian trixie/main i386 python3-dev i386 3.12.6-1 [26.1 kB] Get: 196 http://deb.debian.org/debian trixie/main i386 python3-all-dev i386 3.12.6-1 [1068 B] Get: 197 http://deb.debian.org/debian trixie/main i386 python3-asttokens all 2.4.1-2 [20.5 kB] Get: 198 http://deb.debian.org/debian trixie/main i386 python3-breathe all 4.35.0-3 [78.2 kB] Get: 199 http://deb.debian.org/debian trixie/main i386 python3-dateutil all 2.9.0-3 [79.3 kB] Get: 200 http://deb.debian.org/debian trixie/main i386 python3-decorator all 5.1.1-5 [15.1 kB] Get: 201 http://deb.debian.org/debian trixie/main i386 python3.12-doc all 3.12.6-1 [13.1 MB] Get: 202 http://deb.debian.org/debian trixie/main i386 python3-doc all 3.12.6-1 [9884 B] Get: 203 http://deb.debian.org/debian trixie/main i386 python3-executing all 2.1.0-0.1 [23.9 kB] Get: 204 http://deb.debian.org/debian trixie/main i386 python3-iniconfig all 1.1.1-2 [6396 B] Get: 205 http://deb.debian.org/debian trixie/main i386 python3-parso all 0.8.3-1 [67.4 kB] Get: 206 http://deb.debian.org/debian trixie/main i386 python3-typeshed all 0.0~git20231111.6764465-3 [1258 kB] Get: 207 http://deb.debian.org/debian trixie/main i386 python3-jedi all 0.19.1+ds1-1 [691 kB] Get: 208 http://deb.debian.org/debian trixie/main i386 python3-traitlets all 5.14.3+really5.14.3-1 [70.9 kB] Get: 209 http://deb.debian.org/debian trixie/main i386 python3-matplotlib-inline all 0.1.6-2 [8652 B] Get: 210 http://deb.debian.org/debian trixie/main i386 python3-ptyprocess all 0.7.0-6 [14.5 kB] Get: 211 http://deb.debian.org/debian trixie/main i386 python3-pexpect all 4.9-3 [55.6 kB] Get: 212 http://deb.debian.org/debian trixie/main i386 python3-wcwidth all 0.2.13+dfsg1-1 [24.9 kB] Get: 213 http://deb.debian.org/debian trixie/main i386 python3-prompt-toolkit all 3.0.48-1 [277 kB] Get: 214 http://deb.debian.org/debian trixie/main i386 python3-pure-eval all 0.2.3-1 [11.2 kB] Get: 215 http://deb.debian.org/debian trixie/main i386 python3-stack-data all 0.6.3-1 [21.6 kB] Get: 216 http://deb.debian.org/debian trixie/main i386 python3-ipython all 8.20.0-1 [556 kB] Get: 217 http://deb.debian.org/debian trixie/main i386 python3-numpy i386 1:1.26.4+ds-11 [4299 kB] Get: 218 http://deb.debian.org/debian trixie/main i386 python3-pandas-lib i386 2.2.3+dfsg-5 [4263 kB] Get: 219 http://deb.debian.org/debian trixie/main i386 python3-pandas all 2.2.3+dfsg-5 [3096 kB] Get: 220 http://deb.debian.org/debian trixie/main i386 python3-pluggy all 1.5.0-1 [26.9 kB] Get: 221 http://deb.debian.org/debian trixie/main i386 python3-pytest all 8.3.3-1 [249 kB] Get: 222 http://deb.debian.org/debian trixie/main i386 python3-sphinx-copybutton all 0.5.2-2 [17.9 kB] Get: 223 http://deb.debian.org/debian trixie/main i386 sphinx-rtd-theme-common all 3.0.1+dfsg-1 [1022 kB] Get: 224 http://deb.debian.org/debian trixie/main i386 python3-sphinxcontrib.jquery all 4.1-5 [7348 B] Get: 225 http://deb.debian.org/debian trixie/main i386 python3-sphinx-rtd-theme all 3.0.1+dfsg-1 [29.5 kB] Fetched 194 MB in 7s (29.7 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package fonts-lato. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19956 files and directories currently installed.) Preparing to unpack .../fonts-lato_2.015-1_all.deb ... Unpacking fonts-lato (2.015-1) ... Selecting previously unselected package libpython3.12-minimal:i386. Preparing to unpack .../libpython3.12-minimal_3.12.6-1_i386.deb ... Unpacking libpython3.12-minimal:i386 (3.12.6-1) ... Selecting previously unselected package libexpat1:i386. 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Setting up python3-setuptools (74.1.2-2) ... Setting up python3-jedi (0.19.1+ds1-1) ... Setting up python3-babel (2.14.0-1) ... update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode Setting up python3-pygments (2.18.0+dfsg-1) ... Setting up python3-chardet (5.2.0+dfsg-1) ... Setting up python3-ipython (8.20.0-1) ... Setting up python3-requests (2.32.3+dfsg-1) ... Setting up python3-numpy (1:1.26.4+ds-11) ... Setting up dh-python (6.20241024) ... Setting up pybuild-plugin-pyproject (6.20241024) ... Setting up python3-pandas-lib:i386 (2.2.3+dfsg-5) ... Setting up python3-pandas (2.2.3+dfsg-5) ... Setting up libheif-plugin-dav1d:i386 (1.19.1-1) ... Setting up libheif-plugin-libde265:i386 (1.19.1-1) ... Setting up libheif1:i386 (1.19.1-1) ... Setting up libgd3:i386 (2.3.3-12+b1) ... Setting up libgvc6 (2.42.4-2+b1) ... Setting up graphviz (2.42.4-2+b1) ... Processing triggers for libc-bin (2.40-3) ... Processing triggers for sgml-base (1.31) ... Setting up docutils-common (0.21.2+dfsg-2) ... Processing triggers for sgml-base (1.31) ... Setting up python3-docutils (0.21.2+dfsg-2) ... Setting up python3-sphinx (7.4.7-4) ... Setting up python3-sphinx-copybutton (0.5.2-2) ... Setting up python3-breathe (4.35.0-3) ... Setting up python3-sphinxcontrib.jquery (4.1-5) ... Setting up sphinx-basic-ng (1.0.0~beta2-1) ... Setting up python3-sphinx-rtd-theme (3.0.1+dfsg-1) ... Setting up furo (2024.08.06+dfsg-1) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/python-gsd-3.3.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../python-gsd_3.3.0-1_source.changes dpkg-buildpackage: info: source package python-gsd dpkg-buildpackage: info: source version 3.3.0-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Drew Parsons dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 dpkg-source: info: using options from python-gsd-3.3.0/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/ debian/rules clean dh clean --with python3,sphinxdoc --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild dh_autoreconf_clean -O--buildsystem=pybuild debian/rules override_dh_clean make[1]: Entering directory '/build/reproducible-path/python-gsd-3.3.0' dh_clean rm -f gsd/fl.c || /bin/true rm -rf devdoc rm -rf gsd/test/.pytest_cache make[1]: Leaving directory '/build/reproducible-path/python-gsd-3.3.0' debian/rules binary dh binary --with python3,sphinxdoc --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild dh_auto_build -O--buildsystem=pybuild I: pybuild plugin_pyproject:129: Building wheel for python3.12 with "build" module I: pybuild base:311: python3.12 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/reproducible-path/python-gsd-3.3.0/.pybuild/cpython3_3.12_gsd * Building wheel... Compiling gsd/fl.pyx because it changed. [1/1] Cythonizing gsd/fl.pyx running bdist_wheel running build running build_py creating build creating build/lib.linux-i686-cpython-312 creating build/lib.linux-i686-cpython-312/gsd copying gsd/pytest_plugin_validate.py -> build/lib.linux-i686-cpython-312/gsd copying gsd/hoomd.py -> build/lib.linux-i686-cpython-312/gsd copying gsd/pygsd.py -> build/lib.linux-i686-cpython-312/gsd copying gsd/__init__.py -> build/lib.linux-i686-cpython-312/gsd copying gsd/conftest.py -> build/lib.linux-i686-cpython-312/gsd copying gsd/__main__.py -> build/lib.linux-i686-cpython-312/gsd copying gsd/version.py -> build/lib.linux-i686-cpython-312/gsd creating build/lib.linux-i686-cpython-312/gsd/test copying gsd/test/test_fl.py -> build/lib.linux-i686-cpython-312/gsd/test copying gsd/test/conftest.py -> build/lib.linux-i686-cpython-312/gsd/test copying gsd/test/test_hoomd.py -> build/lib.linux-i686-cpython-312/gsd/test copying gsd/test/test_largefile.py -> build/lib.linux-i686-cpython-312/gsd/test running egg_info creating gsd.egg-info writing gsd.egg-info/PKG-INFO writing dependency_links to gsd.egg-info/dependency_links.txt writing entry points to gsd.egg-info/entry_points.txt writing requirements to gsd.egg-info/requires.txt writing top-level names to gsd.egg-info/top_level.txt writing manifest file 'gsd.egg-info/SOURCES.txt' dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative reading manifest file 'gsd.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file 'gsd.egg-info/SOURCES.txt' copying gsd/fl.c -> build/lib.linux-i686-cpython-312/gsd copying gsd/fl.pyx -> build/lib.linux-i686-cpython-312/gsd copying gsd/gsd.c -> build/lib.linux-i686-cpython-312/gsd copying gsd/gsd.h -> build/lib.linux-i686-cpython-312/gsd copying gsd/libgsd.pxd -> build/lib.linux-i686-cpython-312/gsd copying gsd/test/pytest.ini -> build/lib.linux-i686-cpython-312/gsd/test copying gsd/test/test_gsd_v1.gsd -> build/lib.linux-i686-cpython-312/gsd/test running build_ext building 'gsd.fl' extension creating build/temp.linux-i686-cpython-312 creating build/temp.linux-i686-cpython-312/gsd i686-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-gsd-3.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -Igsd -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c gsd/fl.c -o build/temp.linux-i686-cpython-312/gsd/fl.o i686-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-gsd-3.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -Igsd -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c gsd/gsd.c -o build/temp.linux-i686-cpython-312/gsd/gsd.o gsd/gsd.c: In function 'gsd_is_entry_valid': gsd/gsd.c:435:33: warning: comparison of integer expressions of different signedness: 'int64_t' {aka 'long long int'} and 'long long unsigned int' [-Wsign-compare] 435 | if ((entry.location + size) > (uint64_t)handle->file_size) | ^ gsd/gsd.c: In function 'gsd_expand_file_index': gsd/gsd.c:994:44: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'int'} and 'size_t' {aka 'unsigned int'} [-Wsign-compare] 994 | if (bytes_read == -1 || bytes_read != bytes_to_copy) | ^~ gsd/gsd.c:1005:50: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'int'} and 'size_t' {aka 'unsigned int'} [-Wsign-compare] 1005 | if (bytes_written == -1 || bytes_written != bytes_to_copy) | ^~ gsd/gsd.c:1031:50: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'int'} and 'size_t' {aka 'unsigned int'} [-Wsign-compare] 1031 | if (bytes_written == -1 || bytes_written != bytes_to_copy) | ^~ gsd/gsd.c: In function 'gsd_flush_write_buffer': gsd/gsd.c:1119:46: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'int'} and 'size_t' {aka 'unsigned int'} [-Wsign-compare] 1119 | if (bytes_written == -1 || bytes_written != handle->write_buffer.size) | ^~ gsd/gsd.c: In function 'gsd_flush_name_buffer': gsd/gsd.c:1211:50: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'int'} and 'size_t' {aka 'unsigned int'} [-Wsign-compare] 1211 | if (bytes_written == -1 || bytes_written != handle->file_names.data.reserved) | ^~ gsd/gsd.c:1244:27: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'int'} and 'size_t' {aka 'unsigned int'} [-Wsign-compare] 1244 | if (bytes_written != (handle->file_names.data.reserved - old_size)) | ^~ gsd/gsd.c: In function 'gsd_initialize_handle': gsd/gsd.c:1507:40: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'int'} and 'size_t' {aka 'unsigned int'} [-Wsign-compare] 1507 | if (bytes_read == -1 || bytes_read != namelist_n_bytes) | ^~ gsd/gsd.c: In function 'gsd_flush': gsd/gsd.c:1993:50: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'int'} and 'size_t' {aka 'unsigned int'} [-Wsign-compare] 1993 | if (bytes_written == -1 || bytes_written != bytes_to_write) | ^~ gsd/gsd.c: In function 'gsd_write_chunk': gsd/gsd.c:2126:50: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'int'} and 'size_t' {aka 'unsigned int'} [-Wsign-compare] 2126 | if (bytes_written == -1 || bytes_written != size) | ^~ gsd/gsd.c: In function 'gsd_read_chunk': gsd/gsd.c:2281:34: warning: comparison of integer expressions of different signedness: 'int64_t' {aka 'long long int'} and 'long long unsigned int' [-Wsign-compare] 2281 | if ((chunk->location + size) > (uint64_t)handle->file_size) | ^ gsd/gsd.c:2287:40: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'int'} and 'size_t' {aka 'unsigned int'} [-Wsign-compare] 2287 | if (bytes_read == -1 || bytes_read != size) | ^~ gsd/gsd.c: In function 'gsd_upgrade': gsd/gsd.c:2471:54: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'int'} and 'unsigned int' [-Wsign-compare] 2471 | if (bytes_written == -1 || bytes_written != sizeof(struct gsd_index_entry) * buf.size) | ^~ gsd/gsd.c:2526:54: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'int'} and 'size_t' {aka 'unsigned int'} [-Wsign-compare] 2526 | if (bytes_written == -1 || bytes_written != new_name_buf.reserved) | ^~ i686-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-gsd-3.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-i686-cpython-312/gsd/fl.o build/temp.linux-i686-cpython-312/gsd/gsd.o -L/usr/lib/i386-linux-gnu -o build/lib.linux-i686-cpython-312/gsd/fl.cpython-312-i386-linux-gnu.so installing to build/bdist.linux-i686/wheel running install running install_lib creating build/bdist.linux-i686 creating build/bdist.linux-i686/wheel creating build/bdist.linux-i686/wheel/gsd copying build/lib.linux-i686-cpython-312/gsd/fl.cpython-312-i386-linux-gnu.so -> build/bdist.linux-i686/wheel/./gsd copying build/lib.linux-i686-cpython-312/gsd/pytest_plugin_validate.py -> build/bdist.linux-i686/wheel/./gsd copying build/lib.linux-i686-cpython-312/gsd/hoomd.py -> build/bdist.linux-i686/wheel/./gsd creating build/bdist.linux-i686/wheel/gsd/test copying build/lib.linux-i686-cpython-312/gsd/test/pytest.ini -> build/bdist.linux-i686/wheel/./gsd/test copying build/lib.linux-i686-cpython-312/gsd/test/test_gsd_v1.gsd -> build/bdist.linux-i686/wheel/./gsd/test copying build/lib.linux-i686-cpython-312/gsd/test/test_fl.py -> build/bdist.linux-i686/wheel/./gsd/test copying build/lib.linux-i686-cpython-312/gsd/test/conftest.py -> build/bdist.linux-i686/wheel/./gsd/test copying build/lib.linux-i686-cpython-312/gsd/test/test_hoomd.py -> build/bdist.linux-i686/wheel/./gsd/test copying build/lib.linux-i686-cpython-312/gsd/test/test_largefile.py -> build/bdist.linux-i686/wheel/./gsd/test copying build/lib.linux-i686-cpython-312/gsd/gsd.h -> build/bdist.linux-i686/wheel/./gsd copying build/lib.linux-i686-cpython-312/gsd/pygsd.py -> build/bdist.linux-i686/wheel/./gsd copying build/lib.linux-i686-cpython-312/gsd/gsd.c -> build/bdist.linux-i686/wheel/./gsd copying build/lib.linux-i686-cpython-312/gsd/__init__.py -> build/bdist.linux-i686/wheel/./gsd copying build/lib.linux-i686-cpython-312/gsd/conftest.py -> build/bdist.linux-i686/wheel/./gsd copying build/lib.linux-i686-cpython-312/gsd/fl.c -> build/bdist.linux-i686/wheel/./gsd copying build/lib.linux-i686-cpython-312/gsd/__main__.py -> build/bdist.linux-i686/wheel/./gsd copying build/lib.linux-i686-cpython-312/gsd/fl.pyx -> build/bdist.linux-i686/wheel/./gsd copying build/lib.linux-i686-cpython-312/gsd/version.py -> build/bdist.linux-i686/wheel/./gsd copying build/lib.linux-i686-cpython-312/gsd/libgsd.pxd -> build/bdist.linux-i686/wheel/./gsd running install_egg_info Copying gsd.egg-info to build/bdist.linux-i686/wheel/./gsd-3.3.0.egg-info running install_scripts creating build/bdist.linux-i686/wheel/gsd-3.3.0.dist-info/WHEEL creating '/build/reproducible-path/python-gsd-3.3.0/.pybuild/cpython3_3.12_gsd/.tmp-6yea8bul/gsd-3.3.0-cp312-cp312-linux_i686.whl' and adding 'build/bdist.linux-i686/wheel' to it adding 'gsd/__init__.py' adding 'gsd/__main__.py' adding 'gsd/conftest.py' adding 'gsd/fl.c' adding 'gsd/fl.cpython-312-i386-linux-gnu.so' adding 'gsd/fl.pyx' adding 'gsd/gsd.c' adding 'gsd/gsd.h' adding 'gsd/hoomd.py' adding 'gsd/libgsd.pxd' adding 'gsd/pygsd.py' adding 'gsd/pytest_plugin_validate.py' adding 'gsd/version.py' adding 'gsd/test/conftest.py' adding 'gsd/test/pytest.ini' adding 'gsd/test/test_fl.py' adding 'gsd/test/test_gsd_v1.gsd' adding 'gsd/test/test_hoomd.py' adding 'gsd/test/test_largefile.py' adding 'gsd-3.3.0.dist-info/LICENSE' adding 'gsd-3.3.0.dist-info/METADATA' adding 'gsd-3.3.0.dist-info/WHEEL' adding 'gsd-3.3.0.dist-info/entry_points.txt' adding 'gsd-3.3.0.dist-info/top_level.txt' adding 'gsd-3.3.0.dist-info/RECORD' removing build/bdist.linux-i686/wheel Successfully built gsd-3.3.0-cp312-cp312-linux_i686.whl I: pybuild plugin_pyproject:144: Unpacking wheel built for python3.12 with "installer" module debian/rules execute_after_dh_auto_build-indep make[1]: Entering directory '/build/reproducible-path/python-gsd-3.3.0' doxygen warning: Tag 'OUTPUT_TEXT_DIRECTION' at line 15 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'TCL_SUBST' at line 43 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'COLS_IN_ALPHA_INDEX' at line 152 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'HTML_TIMESTAMP' at line 168 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'FORMULA_TRANSPARENT' at line 200 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'LATEX_SOURCE_CODE' at line 232 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'LATEX_TIMESTAMP' at line 234 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'RTF_SOURCE_CODE' at line 245 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOCBOOK_PROGRAMLISTING' at line 266 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'CLASS_DIAGRAMS' at line 301 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_FONTNAME' at line 306 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_FONTSIZE' at line 307 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_TRANSPARENT' at line 332 of file 'Doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" Doxygen version used: 1.9.8 Notice: Output directory 'devdoc' does not exist. I have created it for you. Searching for include files... Searching for example files... Searching for images... Searching for dot files... Searching for msc files... Searching for dia files... Searching for files to exclude Searching INPUT for files to process... Searching for files in directory /build/reproducible-path/python-gsd-3.3.0/gsd Searching for files in directory /build/reproducible-path/python-gsd-3.3.0/gsd/test Reading and parsing tag files Parsing files Preprocessing /build/reproducible-path/python-gsd-3.3.0/gsd/gsd.h... Parsing file /build/reproducible-path/python-gsd-3.3.0/gsd/gsd.h... Building macro definition list... Building group list... Building directory list... Building namespace list... Building file list... Building class list... Building concept list... Computing nesting relations for classes... Associating documentation with classes... Associating documentation with concepts... Associating documentation with modules... Building example list... Searching for enumerations... Searching for documented typedefs... Searching for members imported via using declarations... Searching for included using directives... Searching for documented variables... Building interface member list... Building member list... Searching for friends... Searching for documented defines... Computing class inheritance relations... Computing class usage relations... Flushing cached template relations that have become invalid... Computing class relations... Add enum values to enums... Searching for member function documentation... Creating members for template instances... Building page list... Search for main page... Computing page relations... Determining the scope of groups... Computing module relations... Sorting lists... Determining which enums are documented Computing member relations... Building full member lists recursively... Adding members to member groups. Computing member references... Inheriting documentation... Generating disk names... Adding source references... Adding xrefitems... Sorting member lists... Setting anonymous enum type... Computing dependencies between directories... Generating citations page... Counting members... Counting data structures... Resolving user defined references... Finding anchors and sections in the documentation... Transferring function references... Combining using relations... Adding members to index pages... Correcting members for VHDL... Computing tooltip texts... Generating style sheet... Generating search indices... Generating example documentation... Generating file sources... Generating code for file gsd/gsd.h... Generating file documentation... Generating docs for file gsd/gsd.h... Generating page documentation... Generating group documentation... Generating class documentation... Generating docs for compound gsd_byte_buffer... Generating docs for compound gsd_handle... Generating docs for compound gsd_header... Generating docs for compound gsd_index_buffer... Generating docs for compound gsd_index_entry... Generating docs for compound gsd_name_buffer... Generating docs for compound gsd_name_id_map... Generating docs for compound gsd_name_id_pair... Generating concept documentation... Generating module documentation... Generating namespace documentation... Generating graph info page... Generating directory documentation... finalizing index lists... writing tag file... Generating XML output... Generating XML output for class gsd_byte_buffer Generating XML output for class gsd_handle Generating XML output for class gsd_header Generating XML output for class gsd_index_buffer Generating XML output for class gsd_index_entry Generating XML output for class gsd_name_buffer Generating XML output for class gsd_name_id_map Generating XML output for class gsd_name_id_pair Generating XML output for file gsd.h Generate XML output for dir /build/reproducible-path/python-gsd-3.3.0/gsd/ Running plantuml with JAVA... type lookup cache used 139/65536 hits=400 misses=148 symbol lookup cache used 178/65536 hits=560 misses=178 finished... PYTHONPATH=/build/reproducible-path/python-gsd-3.3.0/.pybuild/cpython3_3.12_gsd/build READTHEDOCS=True sphinx-build -b html doc /build/reproducible-path/python-gsd-3.3.0/.pybuild/html # HTML generator Running Sphinx v7.4.7 loading translations [en]... done /usr/lib/python3/dist-packages/breathe/project.py:116: RemovedInSphinx80Warning: Sphinx 8 will drop support for representing paths as strings. Use "pathlib.Path" or "os.fspath" instead. self._default_build_dir = os.path.dirname(app.doctreedir.rstrip(os.sep)) making output directory... done Converting `source_suffix = '.rst'` to `source_suffix = {'.rst': 'restructuredtext'}`. loading intersphinx inventory 'python' from /usr/share/doc/python3/html/objects.inv... loading intersphinx inventory 'numpy' from /usr/share/doc/python-numpy/html/objects.inv... building [mo]: targets for 0 po files that are out of date writing output... building [html]: targets for 22 source files that are out of date updating environment: [new config] 22 added, 0 changed, 0 removed reading sources... [ 5%] c-api reading sources... [ 9%] changes reading sources... [ 14%] cli reading sources... [ 18%] community reading sources... [ 23%] contributing reading sources... [ 27%] credits reading sources... [ 32%] file-layer reading sources... [ 36%] fl-examples /usr/lib/python3/dist-packages/IPython/paths.py:69: UserWarning: IPython parent '/nonexistent/first-build' is not a writable location, using a temp directory. warn("IPython parent '{0}' is not a writable location," /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' reading sources... [ 41%] hoomd-examples /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms implicit data copy when writing chunk: log/value/potential_energy implicit data copy when writing chunk: log/value/potential_energy implicit data copy when writing chunk: log/value/potential_energy implicit data copy when writing chunk: log/value/potential_energy implicit data copy when writing chunk: log/value/potential_energy implicit data copy when writing chunk: log/value/potential_energy implicit data copy when writing chunk: log/value/potential_energy implicit data copy when writing chunk: log/value/potential_energy implicit data copy when writing chunk: log/value/potential_energy implicit data copy when writing chunk: log/value/potential_energy /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms implicit data copy when writing chunk: log/invalid /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' reading sources... [ 45%] index reading sources... [ 50%] indices reading sources... [ 55%] installation reading sources... [ 59%] license reading sources... [ 64%] python-api reading sources... [ 68%] python-module-gsd.fl /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' reading sources... [ 73%] python-module-gsd.hoomd /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:795: UserWarning: using bookmarks requires you to install the `pickleshare` library. self.shell.db['bookmarks'] = bkms /usr/lib/python3/dist-packages/IPython/core/magics/osm.py:761: UserWarning: using bookmarks requires you to install the `pickleshare` library. bkms = self.shell.db.get('bookmarks',{}) UsageError: %bookmark -d: Can't delete bookmark 'ipy_savedir' reading sources... [ 77%] python-module-gsd.pygsd reading sources... [ 82%] python-module-gsd.version reading sources... [ 86%] schema-hoomd reading sources... [ 91%] shapes reading sources... [ 95%] specification reading sources... [100%] style /build/reproducible-path/python-gsd-3.3.0/doc/c-api.rst:12: WARNING: Invalid C declaration: Expected identifier in nested name. [error at 0] ^ /build/reproducible-path/python-gsd-3.3.0/doc/c-api.rst:12: WARNING: Invalid C declaration: Expected identifier in nested name. [error at 0] ^ docstring of gsd.fl.GSDFile.chunk_exists:13: ERROR: Error in "highlight" directive: no content permitted. .. highlight:: python with gsd.fl.open(name='file.gsd', mode='w', application="My application", schema="My Schema", schema_version=[1,0]) as f: f.write_chunk(name='chunk1', data=numpy.array([1,2,3,4], dtype=numpy.float32)) f.write_chunk(name='chunk2', data=numpy.array([[5,6],[7,8]], dtype=numpy.float32)) f.end_frame() f.write_chunk(name='chunk1', data=numpy.array([9,10,11,12], dtype=numpy.float32)) f.write_chunk(name='chunk2', data=numpy.array([[13,14],[15,16]], dtype=numpy.float32)) f.end_frame() f = gsd.fl.open(name='file.gsd', mode='r', application="My application", schema="My Schema", schema_version=[1,0]) f.chunk_exists(frame=0, name='chunk1') f.chunk_exists(frame=0, name='chunk2') f.chunk_exists(frame=0, name='chunk3') f.chunk_exists(frame=10, name='chunk1') f.close() docstring of gsd.fl.GSDFile.truncate:10: WARNING: Block quote ends without a blank line; unexpected unindent. docstring of gsd.fl.GSDFile.truncate:14: WARNING: Definition list ends without a blank line; unexpected unindent. docstring of gsd.fl.GSDFile.truncate:19: WARNING: Definition list ends without a blank line; unexpected unindent. looking for now-outdated files... none found pickling environment... done checking consistency... done preparing documents... done copying assets... copying static files... done copying extra files... done copying assets: done writing output... [ 5%] c-api writing output... [ 9%] changes writing output... [ 14%] cli writing output... [ 18%] community writing output... [ 23%] contributing writing output... [ 27%] credits writing output... [ 32%] file-layer writing output... [ 36%] fl-examples writing output... [ 41%] hoomd-examples writing output... [ 45%] index writing output... [ 50%] indices writing output... [ 55%] installation writing output... [ 59%] license writing output... [ 64%] python-api writing output... [ 68%] python-module-gsd.fl writing output... [ 73%] python-module-gsd.hoomd writing output... [ 77%] python-module-gsd.pygsd writing output... [ 82%] python-module-gsd.version writing output... [ 86%] schema-hoomd writing output... [ 91%] shapes writing output... [ 95%] specification writing output... [100%] style /build/reproducible-path/python-gsd-3.3.0/.pybuild/cpython3_3.12_gsd/build/gsd/hoomd.py:docstring of gsd.hoomd.BondData:13: WARNING: 'any' reference target not found: hoomd.State /build/reproducible-path/python-gsd-3.3.0/.pybuild/cpython3_3.12_gsd/build/gsd/hoomd.py:docstring of gsd.hoomd.ConstraintData:11: WARNING: 'any' reference target not found: hoomd.State /build/reproducible-path/python-gsd-3.3.0/.pybuild/cpython3_3.12_gsd/build/gsd/hoomd.py:docstring of gsd.hoomd.ParticleData:11: WARNING: 'any' reference target not found: hoomd.State /build/reproducible-path/python-gsd-3.3.0/doc/schema-hoomd.rst:21: WARNING: 'any' reference target not found: hoomd.State generating indices... genindex py-modindex done writing additional pages... search done dumping search index in English (code: en)... done dumping object inventory... done build succeeded, 10 warnings. The HTML pages are in ../../build/reproducible-path/python-gsd-3.3.0/.pybuild/html. make[1]: Leaving directory '/build/reproducible-path/python-gsd-3.3.0' dh_auto_test -O--buildsystem=pybuild I: pybuild base:311: cd /build/reproducible-path/python-gsd-3.3.0/.pybuild/cpython3_3.12_gsd/build; python3.12 -m pytest /build/reproducible-path/python-gsd-3.3.0/gsd/test ============================= test session starts ============================== platform linux -- Python 3.12.6, pytest-8.3.3, pluggy-1.5.0 rootdir: /build/reproducible-path/python-gsd-3.3.0/gsd/test configfile: pytest.ini plugins: typeguard-4.4.1 collected 133 items ../../../gsd/test/test_fl.py ........................................... [ 32%] ..................................... [ 60%] ../../../gsd/test/test_hoomd.py ........................................ [ 90%] .......... [ 97%] ../../../gsd/test/test_largefile.py ... [100%] =============================== warnings summary =============================== ../../../gsd/test/test_largefile.py:15 /build/reproducible-path/python-gsd-3.3.0/gsd/test/test_largefile.py:15: PytestUnknownMarkWarning: Unknown pytest.mark.validate - is this a typo? You can register custom marks to avoid this warning - for details, see https://docs.pytest.org/en/stable/how-to/mark.html @pytest.mark.validate() test_largefile.py::test_large_n[268435456] /usr/lib/python3/dist-packages/_pytest/python.py:163: PytestReturnNotNoneWarning: Expected None, but test_largefile.py::test_large_n[268435456] returned True, which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`? warnings.warn( test_largefile.py::test_large_n[536870913] /usr/lib/python3/dist-packages/_pytest/python.py:163: PytestReturnNotNoneWarning: Expected None, but test_largefile.py::test_large_n[536870913] returned True, which will be an error in a future version of pytest. Did you mean to use `assert` instead of `return`? warnings.warn( -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ================= 133 passed, 3 warnings in 153.82s (0:02:33) ================== create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install -O--buildsystem=pybuild I: pybuild plugin_pyproject:178: Copying package built for python3.12 to destdir dh_installdocs -O--buildsystem=pybuild dh_installdocs: warning: Cannot auto-detect main package for python-gsd-doc. If the default is wrong, please use --doc-main-package dh_sphinxdoc -O--buildsystem=pybuild dh_sphinxdoc: warning: ignoring unknown JavaScript code: debian/python-gsd-doc/usr/share/doc/python-gsd-doc/html/_static/copybutton_funcs.js dh_sphinxdoc: warning: ignoring unknown JavaScript code: debian/python-gsd-doc/usr/share/doc/python-gsd-doc/html/_static/clipboard.min.js dh_sphinxdoc: warning: ignoring unknown JavaScript code: debian/python-gsd-doc/usr/share/doc/python-gsd-doc/html/_static/copybutton.js dh_installchangelogs -O--buildsystem=pybuild dh_installman -O--buildsystem=pybuild dh_python3 -O--buildsystem=pybuild debian/rules execute_after_dh_python3 make[1]: Entering directory '/build/reproducible-path/python-gsd-3.3.0' dh_numpy3 make[1]: Leaving directory '/build/reproducible-path/python-gsd-3.3.0' dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild dh_fixperms -O--buildsystem=pybuild dh_missing -O--buildsystem=pybuild dh_dwz -a -O--buildsystem=pybuild dh_strip -a -O--buildsystem=pybuild dh_makeshlibs -a -O--buildsystem=pybuild dh_shlibdeps -a -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dpkg-gencontrol: warning: package python-gsd-doc: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package python-gsd-doc: substitution variable ${sphinxdoc:Built-Using} unused, but is defined dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'python3-gsd' in '../python3-gsd_3.3.0-1_i386.deb'. dpkg-deb: building package 'python3-gsd-dbgsym' in '../python3-gsd-dbgsym_3.3.0-1_i386.deb'. dpkg-deb: building package 'python-gsd-doc' in '../python-gsd-doc_3.3.0-1_all.deb'. dpkg-genbuildinfo --build=binary -O../python-gsd_3.3.0-1_i386.buildinfo dpkg-genchanges --build=binary -O../python-gsd_3.3.0-1_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-source: info: using options from python-gsd-3.3.0/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/22113 and its subdirectories I: Current time: Thu Nov 7 12:07:36 -12 2024 I: pbuilder-time-stamp: 1731024456 Fri Nov 8 00:07:38 UTC 2024 I: 1st build successful. Starting 2nd build on remote node infom08-i386.debian.net. Fri Nov 8 00:07:38 UTC 2024 I: Preparing to do remote build '2' on infom08-i386.debian.net. Fri Nov 8 00:09:28 UTC 2024 I: Deleting $TMPDIR on infom08-i386.debian.net. Fri Nov 8 00:09:29 UTC 2024 I: python-gsd_3.3.0-1_i386.changes: Format: 1.8 Date: Fri, 05 Jul 2024 18:19:20 +0200 Source: python-gsd Binary: python-gsd-doc python3-gsd python3-gsd-dbgsym Architecture: all i386 Version: 3.3.0-1 Distribution: unstable Urgency: medium Maintainer: Debichem Team Changed-By: Drew Parsons Description: python-gsd-doc - native file format for HOOMD-blue (documentation) python3-gsd - native file format for HOOMD-blue (Python 3 module) Changes: python-gsd (3.3.0-1) unstable; urgency=medium . * New upstream release. - update versioned Build-Depends: python3-numpy (>= 1:1.19.0~) (compatible with numpy 2) - Build-Depends-Indep: python3-sphinx-copybutton * update debian patch docs_local_scripts.patch to link local docs (intersphinx) for python, numpy. Build-Depends-Indep: python-numpy-doc * debian patch docs_build.patch removes doc components which are not available (sphinxcontrib.googleanalytics is not packaged, and would introduce privacy issues if used anyway) * run doxygen manually to prepare devdoc (API docs) * use pytest to run build-time tests Toplevel test config fails so provide path to tests. * run debian/tests over all supported python versions * run dh_numpy3 after dh_python3 * register doc/_templates/page.html in debian/missing-sources Checksums-Sha1: 3305f70a3e6d1915c8a00b491a74cbb71cb7b62f 130364 python-gsd-doc_3.3.0-1_all.deb 2a3683951905072c84ecbafca5e5f04310fbe53f 11459 python-gsd_3.3.0-1_i386.buildinfo 84ca06253e082e92809fffe20a4a4b5a42298d12 337344 python3-gsd-dbgsym_3.3.0-1_i386.deb 2fe9d6b6b8c992e547a19ff8565bc274b85b3858 203872 python3-gsd_3.3.0-1_i386.deb Checksums-Sha256: 945c9a53bb337a78e7327b181c704fdb0f2bf9ceb9d03237c87baecc4b4131e3 130364 python-gsd-doc_3.3.0-1_all.deb ee00b1c9d46f8627ae8789a2fe2234a030b879b9a22eaa44edf7db9c9deab83f 11459 python-gsd_3.3.0-1_i386.buildinfo 7888fb6c7786198ad292cd810b02296d08347955029382510e2589db8144b37b 337344 python3-gsd-dbgsym_3.3.0-1_i386.deb 9245388463097795ce92299a43ff598d6ce922793ddfab09a81934b66474bcb8 203872 python3-gsd_3.3.0-1_i386.deb Files: a80694b1de85a6167edcf55c2931d8af 130364 doc optional python-gsd-doc_3.3.0-1_all.deb f394d85f159ac2bff85a5354b84e3296 11459 python optional python-gsd_3.3.0-1_i386.buildinfo cb9b171d783c9b463f5bf5dc4bd7f966 337344 debug optional python3-gsd-dbgsym_3.3.0-1_i386.deb 0115cc609a90ddfba8bfb519a6394ed1 203872 python optional python3-gsd_3.3.0-1_i386.deb Fri Nov 8 00:09:30 UTC 2024 I: diffoscope 282 will be used to compare the two builds: Running as unit: rb-diffoscope-i386_19-29086.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.Wv4y1wp2/python-gsd_3.3.0-1.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.Wv4y1wp2/python-gsd_3.3.0-1.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.Wv4y1wp2/python-gsd_3.3.0-1.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.Wv4y1wp2/b1/python-gsd_3.3.0-1_i386.changes /srv/reproducible-results/rbuild-debian/r-b-build.Wv4y1wp2/b2/python-gsd_3.3.0-1_i386.changes ## close_archive (total time: 0.000s) 0.000s 6 calls diffoscope.comparators.xz.XzContainer 0.000s 2 calls diffoscope.comparators.deb.DebContainer 0.000s 4 calls diffoscope.comparators.tar.TarContainer 0.000s 2 calls diffoscope.comparators.deb.DebTarContainer ## command (total time: 0.435s) 0.192s 8 calls diff 0.164s 11 calls js-beautify 0.045s 6 calls xz 0.017s 11 calls html2text 0.008s 3 calls cmp 0.008s 3 calls cmp (external) 0.001s 15 calls cmp (internal) ## compare_files (cumulative) (total time: 12.231s) 2.537s 1 call abc.DotChangesFile 2.512s 1 call abc.DebFile 2.491s 2 calls abc.XzFile 2.409s 1 call abc.DebDataTarFile 2.173s 1 call abc.JavaScriptFile 0.072s 1 call abc.HtmlFile 0.031s 1 call abc.TarFile 0.007s 1 call abc.Md5sumsFile ## container_extract (total time: 0.085s) 0.045s 6 calls diffoscope.comparators.xz.XzContainer 0.035s 144 calls diffoscope.comparators.deb.DebTarContainer 0.003s 8 calls diffoscope.comparators.deb.DebContainer 0.003s 6 calls diffoscope.comparators.tar.TarContainer ## diff (total time: 0.047s) 0.047s 25 calls linediff ## has_same_content_as (total time: 0.011s) 0.005s 3 calls abc.DebFile 0.004s 1 call abc.DebDataTarFile 0.001s 4 calls diffoscope.comparators.utils.libarchive.LibarchiveSymlink 0.000s 2 calls abc.TextFile 0.000s 2 calls abc.Md5sumsFile 0.000s 1 call abc.HtmlFile 0.000s 2 calls abc.XzFile 0.000s 1 call abc.DotChangesFile 0.000s 1 call abc.TarFile 0.000s 1 call abc.JavaScriptFile ## main (total time: 3.232s) 3.232s 2 calls outputs 0.001s 1 call cleanup ## open_archive (total time: 0.000s) 0.000s 6 calls diffoscope.comparators.xz.XzContainer 0.000s 4 calls diffoscope.comparators.tar.TarContainer 0.000s 2 calls diffoscope.comparators.deb.DebContainer 0.000s 2 calls diffoscope.comparators.deb.DebTarContainer ## output (total time: 0.255s) 0.254s 1 call html 0.001s 1 call text 0.000s 1 call json ## recognizes (total time: 0.103s) 0.055s 578 calls diffoscope.comparators.utils.libarchive.LibarchiveMember 0.027s 12 calls diffoscope.comparators.binary.FilesystemFile 0.015s 260 calls diffoscope.comparators.utils.archive.ArchiveMember 0.006s 162 calls diffoscope.comparators.debian.DebControlMember ## specialize (total time: 0.063s) 0.063s 18 calls specialize Finished with result: success Main processes terminated with: code=exited/status=1 Service runtime: 3.581s CPU time consumed: 3.678s Fri Nov 8 00:09:34 UTC 2024 W: Diffoscope claims the build is reproducible, but there is a diffoscope file. Please investigate. Fri Nov 8 00:09:34 UTC 2024 E: python-gsd failed to build reproducibly in trixie on i386. Fri Nov 8 00:09:36 UTC 2024 I: Submitting .buildinfo files to external archives: Fri Nov 8 00:09:36 UTC 2024 I: Submitting 16K b1/python-gsd_3.3.0-1_i386.buildinfo.asc Fri Nov 8 00:09:37 UTC 2024 I: Submitting 16K b2/python-gsd_3.3.0-1_i386.buildinfo.asc Fri Nov 8 00:09:38 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Fri Nov 8 00:09:38 UTC 2024 I: Done submitting .buildinfo files. Fri Nov 8 00:09:38 UTC 2024 I: Removing signed python-gsd_3.3.0-1_i386.buildinfo.asc files: removed './b1/python-gsd_3.3.0-1_i386.buildinfo.asc' removed './b2/python-gsd_3.3.0-1_i386.buildinfo.asc'