Wed Nov 13 19:39:14 UTC 2024 I: starting to build pymatgen/trixie/i386 on jenkins on '2024-11-13 19:39' Wed Nov 13 19:39:14 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_20/31583/console.log Wed Nov 13 19:39:14 UTC 2024 I: Downloading source for trixie/pymatgen=2024.10.29+dfsg1-3 --2024-11-13 19:39:14-- http://deb.debian.org/debian/pool/main/p/pymatgen/pymatgen_2024.10.29%2bdfsg1-3.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 3223 (3.1K) [text/prs.lines.tag] Saving to: ‘pymatgen_2024.10.29+dfsg1-3.dsc’ 0K ... 100% 420M=0s 2024-11-13 19:39:14 (420 MB/s) - ‘pymatgen_2024.10.29+dfsg1-3.dsc’ saved [3223/3223] Wed Nov 13 19:39:14 UTC 2024 I: pymatgen_2024.10.29+dfsg1-3.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: pymatgen Binary: python3-pymatgen, python-pymatgen-doc Architecture: any all Version: 2024.10.29+dfsg1-3 Maintainer: Debichem Team Uploaders: Drew Parsons Homepage: https://pymatgen.org/ Standards-Version: 4.7.0 Vcs-Browser: https://salsa.debian.org/debichem-team/pymatgen Vcs-Git: https://salsa.debian.org/debichem-team/pymatgen.git Testsuite: autopkgtest Testsuite-Triggers: @builddeps@, packmol, python3-emmet-core Build-Depends: debhelper-compat (= 13), pymatgen-test-files (>= 2024.10.29~) , dh-python, dh-sequence-python3, cython3, pybuild-plugin-pyproject, python3-setuptools, python3-all-dev, python3-pytest, python3-frozendict, python3-matplotlib (>= 3.8~), python3-monty (>= 2024.7.29~), python3-networkx (>= 3~), python3-numpy (>= 1.25.0~), python3-palettable (>= 3.3.3~), python3-pandas (>= 2~), python3-plotly (>= 4.5.0~), python3-pybtex (>= 0.24.0~), python3-requests (>= 2.32~), python3-ruamel.yaml (>= 0.17.0~), python3-scipy (>= 1.13.0~), python3-spglib (>= 2.5.0~), python3-sympy (>= 1.6.2~), python3-tabulate (>= 0.9~), python3-tqdm (>= 4.60~), python3-uncertainties (>= 3.1.4~), python3-joblib (>= 1~), python3-ase (>= 3.23.0~), python3-bs4 (>= 4.9.1~), python3-vtk9 | python3-paraview, python3-h5py (>= 3.11.0~), python3-netcdf4 (>= 1.6.5~), python3-phonopy (>= 2.23~), python3-openbabel (>= 3.1.1~), packmol [!armel !riscv64] , python3-emmet-core Build-Depends-Indep: dh-sequence-sphinxdoc , libjs-jquery , libjs-mathjax , python3-sphinx-rtd-theme Package-List: python-pymatgen-doc deb doc optional arch=all python3-pymatgen deb python optional arch=any Checksums-Sha1: 5150b54d1e064db5ded717ad96065f53f277adc0 9756668 pymatgen_2024.10.29+dfsg1.orig.tar.xz b69e531b4c9397e5be16984b8d718ec5de522561 16380 pymatgen_2024.10.29+dfsg1-3.debian.tar.xz Checksums-Sha256: 1fcce326a821751b560fde5d3287f9beced7c7681945ae4ab33151f29614a185 9756668 pymatgen_2024.10.29+dfsg1.orig.tar.xz f7161aa44de6e32bad95456968507e0e760a546f22e7a3e5a2bad29dcb224b83 16380 pymatgen_2024.10.29+dfsg1-3.debian.tar.xz Files: a2a3ac43c3e068f1b9578e6aeb0ad2f2 9756668 pymatgen_2024.10.29+dfsg1.orig.tar.xz c1ae50d9fb9b9d4583335c2a7ac2b840 16380 pymatgen_2024.10.29+dfsg1-3.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCAAdFiEEI8mpPlhYGekSbQo2Vz7x5L1aAfoFAmcwhosACgkQVz7x5L1a Afroag/+IOUOLCdSqHa5Y0bEohOwwqN3a1DCoFU9XLBvIeeKbd4D5hcVjTsl0AX0 niuzKWk2kTO5yL4XCJoayr07a8uRql3YhZBb6IhJI42phmOPRrB2JMnK9CK4vTMd nvWYwUR5iBIZhtnVy6JTCzrfcABDfMty7HkLktjkJJK+pNrTs9+dchgioKrGExh+ lw2sBhLxtCjbe6ZNzvSizlNEQNMguIgU+B5aAVD1yhKx9wnavnV3+cesYh270QgG NgloNmFNw4PlqdXewQKrSzK2k6Non8lTOZbxXfWzYSkg73bYKfaw/4jJc34aXZWB U/j9woUyQv+AUnhlNRZaHKTdoLXQATyQPO8/23NPxR0HVz6HokJLZl5winmYNDqO 0OLJ+bvaGvXrtmGvl11Qs3QgOImXaNsyngcwX9CnwcGI1IoCJATtmD/Fx8rVRoSz PDUiJZ1KsHC7YaTwR5Dh2uVjDbX0QPRAAdCmwEuKEku/ENo+iIJ2aQVe7BezcHTQ AUe4k+KzprzX20cR8NOsihDLFLRidnIrorNY+38NGjmcKmGWEGb7lNQyfzexxY29 jBnbIUFjjfbZbnfOO536gU4BhOQqKmUtAVVe2LB/u+7YyKEAKNwmCgen+ALnNJxQ mMN/Bf2h0Mr374hoNJTcZgxK67UPPiqDC2lWzkfDmXA/ysE6cxM= =MeoD -----END PGP SIGNATURE----- Wed Nov 13 19:39:14 UTC 2024 I: Checking whether the package is not for us Wed Nov 13 19:39:14 UTC 2024 I: Starting 1st build on remote node infom08-i386.debian.net. Wed Nov 13 19:39:14 UTC 2024 I: Preparing to do remote build '1' on infom08-i386.debian.net. Wed Nov 13 20:06:07 UTC 2024 I: Deleting $TMPDIR on infom08-i386.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Tue Dec 16 14:02:16 -12 2025 I: pbuilder-time-stamp: 1765936936 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [pymatgen_2024.10.29+dfsg1-3.dsc] I: copying [./pymatgen_2024.10.29+dfsg1.orig.tar.xz] I: copying [./pymatgen_2024.10.29+dfsg1-3.debian.tar.xz] I: Extracting source gpgv: Signature made Sun Nov 10 10:10:19 2024 gpgv: using RSA key 23C9A93E585819E9126D0A36573EF1E4BD5A01FA gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./pymatgen_2024.10.29+dfsg1-3.dsc: no acceptable signature found dpkg-source: info: extracting pymatgen in pymatgen-2024.10.29+dfsg1 dpkg-source: info: unpacking pymatgen_2024.10.29+dfsg1.orig.tar.xz dpkg-source: info: unpacking pymatgen_2024.10.29+dfsg1-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying test_lammps_regex_path.patch dpkg-source: info: applying skip_nonfree_testfile.patch dpkg-source: info: applying CVE-2022-42964_ReDOS_vulnerability.patch dpkg-source: info: applying skip_test_zsl_numba.patch dpkg-source: info: applying no_sphinx_markdown_builder.patch dpkg-source: info: applying tests_init.patch dpkg-source: info: applying tests_pass_or_skip.patch dpkg-source: info: applying docs_index.patch dpkg-source: info: applying docs_libjs_local.patch dpkg-source: info: applying test_files_writing.patch dpkg-source: info: applying test_tolerance.patch dpkg-source: info: applying neighbor_set_int64.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/30009/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=6 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='165466898f664788907498d396b8abde' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='30009' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.Dy4a9LPN/pbuilderrc_xI3p --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.Dy4a9LPN/b1 --logfile b1/build.log pymatgen_2024.10.29+dfsg1-3.dsc' SUDO_GID='111' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' I: uname -a Linux infom08-i386 6.10.11+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.10.11-1~bpo12+1 (2024-10-03) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin I: user script /srv/workspace/pbuilder/30009/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), pymatgen-test-files (>= 2024.10.29~), dh-python, dh-sequence-python3, cython3, pybuild-plugin-pyproject, python3-setuptools, python3-all-dev, python3-pytest, python3-frozendict, python3-matplotlib (>= 3.8~), python3-monty (>= 2024.7.29~), python3-networkx (>= 3~), python3-numpy (>= 1.25.0~), python3-palettable (>= 3.3.3~), python3-pandas (>= 2~), python3-plotly (>= 4.5.0~), python3-pybtex (>= 0.24.0~), python3-requests (>= 2.32~), python3-ruamel.yaml (>= 0.17.0~), python3-scipy (>= 1.13.0~), python3-spglib (>= 2.5.0~), python3-sympy (>= 1.6.2~), python3-tabulate (>= 0.9~), python3-tqdm (>= 4.60~), python3-uncertainties (>= 3.1.4~), python3-joblib (>= 1~), python3-ase (>= 3.23.0~), python3-bs4 (>= 4.9.1~), python3-vtk9 | python3-paraview, python3-h5py (>= 3.11.0~), python3-netcdf4 (>= 1.6.5~), python3-phonopy (>= 2.23~), python3-openbabel (>= 3.1.1~), packmol, python3-emmet-core, dh-sequence-sphinxdoc, libjs-jquery, libjs-mathjax, python3-sphinx-rtd-theme dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19956 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on pymatgen-test-files (>= 2024.10.29~); however: Package pymatgen-test-files is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on cython3; however: Package cython3 is not installed. pbuilder-satisfydepends-dummy depends on pybuild-plugin-pyproject; however: Package pybuild-plugin-pyproject is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-all-dev; however: Package python3-all-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. pbuilder-satisfydepends-dummy depends on python3-frozendict; however: Package python3-frozendict is not installed. pbuilder-satisfydepends-dummy depends on python3-matplotlib (>= 3.8~); however: Package python3-matplotlib is not installed. pbuilder-satisfydepends-dummy depends on python3-monty (>= 2024.7.29~); however: Package python3-monty is not installed. pbuilder-satisfydepends-dummy depends on python3-networkx (>= 3~); however: Package python3-networkx is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy (>= 1.25.0~); however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-palettable (>= 3.3.3~); however: Package python3-palettable is not installed. pbuilder-satisfydepends-dummy depends on python3-pandas (>= 2~); however: Package python3-pandas is not installed. pbuilder-satisfydepends-dummy depends on python3-plotly (>= 4.5.0~); however: Package python3-plotly is not installed. pbuilder-satisfydepends-dummy depends on python3-pybtex (>= 0.24.0~); however: Package python3-pybtex is not installed. pbuilder-satisfydepends-dummy depends on python3-requests (>= 2.32~); however: Package python3-requests is not installed. pbuilder-satisfydepends-dummy depends on python3-ruamel.yaml (>= 0.17.0~); however: Package python3-ruamel.yaml is not installed. pbuilder-satisfydepends-dummy depends on python3-scipy (>= 1.13.0~); however: Package python3-scipy is not installed. pbuilder-satisfydepends-dummy depends on python3-spglib (>= 2.5.0~); however: Package python3-spglib is not installed. pbuilder-satisfydepends-dummy depends on python3-sympy (>= 1.6.2~); however: Package python3-sympy is not installed. pbuilder-satisfydepends-dummy depends on python3-tabulate (>= 0.9~); however: Package python3-tabulate is not installed. pbuilder-satisfydepends-dummy depends on python3-tqdm (>= 4.60~); however: Package python3-tqdm is not installed. pbuilder-satisfydepends-dummy depends on python3-uncertainties (>= 3.1.4~); however: Package python3-uncertainties is not installed. pbuilder-satisfydepends-dummy depends on python3-joblib (>= 1~); however: Package python3-joblib is not installed. pbuilder-satisfydepends-dummy depends on python3-ase (>= 3.23.0~); however: Package python3-ase is not installed. pbuilder-satisfydepends-dummy depends on python3-bs4 (>= 4.9.1~); however: Package python3-bs4 is not installed. pbuilder-satisfydepends-dummy depends on python3-vtk9 | python3-paraview; however: Package python3-vtk9 is not installed. Package python3-paraview is not installed. pbuilder-satisfydepends-dummy depends on python3-h5py (>= 3.11.0~); however: Package python3-h5py is not installed. pbuilder-satisfydepends-dummy depends on python3-netcdf4 (>= 1.6.5~); however: Package python3-netcdf4 is not installed. pbuilder-satisfydepends-dummy depends on python3-phonopy (>= 2.23~); however: Package python3-phonopy is not installed. pbuilder-satisfydepends-dummy depends on python3-openbabel (>= 3.1.1~); however: Package python3-openbabel is not installed. pbuilder-satisfydepends-dummy depends on packmol; however: Package packmol is not installed. pbuilder-satisfydepends-dummy depends on python3-emmet-core; however: Package python3-emmet-core is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-sphinxdoc; however: Package dh-sequence-sphinxdoc is not installed. pbuilder-satisfydepends-dummy depends on libjs-jquery; however: Package libjs-jquery is not installed. pbuilder-satisfydepends-dummy depends on libjs-mathjax; however: Package libjs-mathjax is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx-rtd-theme; however: Package python3-sphinx-rtd-theme is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} blt{a} bsdextrautils{a} ca-certificates{a} cython3{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} docutils-common{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-font-awesome{a} fonts-glyphicons-halflings{a} fonts-lato{a} fonts-lyx{a} fonts-mathjax{a} gettext{a} gettext-base{a} groff-base{a} hwloc-nox{a} intltool-debian{a} libaec0{a} libarchive-zip-perl{a} libblas3{a} libbrotli1{a} libcairo2{a} libcom-err2{a} libcurl3t64-gnutls{a} libcurl4t64{a} libdbus-1-3{a} libdebhelper-perl{a} libdeflate0{a} libdouble-conversion3{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm-intel1{a} libdrm-radeon1{a} libdrm2{a} libedit2{a} libegl-mesa0{a} libegl1{a} libelf1t64{a} libevdev2{a} libevent-core-2.1-7t64{a} libevent-pthreads-2.1-7t64{a} libexpat1{a} libexpat1-dev{a} libfabric1{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgbm1{a} libgfortran5{a} libgl1{a} libgl1-mesa-dri{a} libgl2ps1.4{a} libglapi-mesa{a} libglew2.2{a} libglib2.0-0t64{a} libglvnd0{a} libglx-mesa0{a} libglx0{a} libgraphite2-3{a} libgssapi-krb5-2{a} libgudev-1.0-0{a} libharfbuzz0b{a} libhdf5-103-1t64{a} libhdf5-hl-100t64{a} libhwloc-plugins{a} libhwloc15{a} libibverbs1{a} libice6{a} libicu72{a} libimagequant0{a} libinchi1.07{a} libinput-bin{a} libinput10{a} libjbig0{a} libjpeg62-turbo{a} libjs-bootstrap{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-mathjax{a} libjs-sphinxdoc{a} libjs-underscore{a} libjson-perl{a} libjsoncpp26{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} liblbfgsb0{a} liblcms2-2{a} libldap-2.5-0{a} liblerc4{a} libllvm19{a} liblzf1{a} libmaeparser1{a} libmagic-mgc{a} libmagic1t64{a} libmd4c0{a} libmpich12{a} libmtdev1t64{a} libnetcdf19t64{a} libnghttp2-14{a} libnghttp3-9{a} libngtcp2-16{a} libngtcp2-crypto-gnutls8{a} libnl-3-200{a} libnl-route-3-200{a} libnsl2{a} libogg0{a} libopenbabel7{a} libopengl0{a} libopenjp2-7{a} libopenmpi3t64{a} libpciaccess0{a} libpcre2-16-0{a} libpipeline1{a} libpixman-1-0{a} libpng16-16t64{a} libproc2-0{a} libproj25{a} libpsl5t64{a} libpsm-infinipath1{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.12-dev{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.12t64{a} libqhull-r8.0{a} libqt5core5t64{a} libqt5dbus5t64{a} libqt5gui5t64{a} libqt5network5t64{a} libqt5widgets5t64{a} libraqm0{a} librdmacm1t64{a} libreadline8t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsensors-config{a} libsensors5{a} libsharpyuv0{a} libslurm41t64{a} libsm6{a} libssh2-1t64{a} libsymspg2{a} libsz2{a} libtbb12{a} libtbbbind-2-5{a} libtbbmalloc2{a} libtcl8.6{a} libtheora0{a} libtiff6{a} libtirpc-common{a} libtirpc3t64{a} libtk8.6{a} libtool{a} libuchardet0{a} libvtk9.3{a} libvtk9.3-qt{a} libvulkan1{a} libwacom-common{a} libwacom9{a} libwayland-client0{a} libwayland-server0{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libx11-xcb1{a} libxau6{a} libxcb-dri2-0{a} libxcb-dri3-0{a} libxcb-glx0{a} libxcb-icccm4{a} libxcb-image0{a} libxcb-keysyms1{a} libxcb-present0{a} libxcb-randr0{a} libxcb-render-util0{a} libxcb-render0{a} libxcb-shape0{a} libxcb-shm0{a} libxcb-sync1{a} libxcb-util1{a} libxcb-xfixes0{a} libxcb-xinerama0{a} libxcb-xinput0{a} libxcb-xkb1{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxfixes3{a} libxft2{a} libxkbcommon-x11-0{a} libxkbcommon0{a} libxml2{a} libxnvctrl0{a} libxrender1{a} libxshmfence1{a} libxslt1.1{a} libxss1{a} libxxf86vm1{a} libyaml-0-2{a} libz3-4{a} m4{a} man-db{a} media-types{a} mesa-libgallium{a} mpi-default-bin{a} mpich{a} netbase{a} ocl-icd-libopencl1{a} openssl{a} packmol{a} po-debconf{a} procps{a} proj-data{a} pybuild-plugin-pyproject{a} pymatgen-test-files{a} python-babel-localedata{a} python-matplotlib-data{a} python3{a} python3-alabaster{a} python3-all{a} python3-all-dev{a} python3-annotated-types{a} python3-appdirs{a} python3-ase{a} python3-attr{a} python3-autocommand{a} python3-babel{a} python3-brotli{a} python3-bs4{a} python3-bson{a} python3-build{a} python3-certifi{a} python3-cftime{a} python3-chardet{a} python3-charset-normalizer{a} python3-contourpy{a} python3-cycler{a} python3-dateutil{a} python3-decorator{a} python3-defusedxml{a} python3-dev{a} python3-dnspython{a} python3-docutils{a} python3-dotenv{a} python3-email-validator{a} python3-emmet-core{a} python3-fastjsonschema{a} python3-fonttools{a} python3-frozendict{a} python3-fs{a} python3-h5py{a} python3-h5py-serial{a} python3-idna{a} python3-imagesize{a} python3-inflect{a} python3-iniconfig{a} python3-installer{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jinja2{a} python3-joblib{a} python3-jsonschema{a} python3-jsonschema-specifications{a} python3-jupyter-core{a} python3-kiwisolver{a} python3-latexcodec{a} python3-lxml{a} python3-lz4{a} python3-markupsafe{a} python3-matplotlib{a} python3-minimal{a} python3-monty{a} python3-more-itertools{a} python3-mpi4py{a} python3-mpmath{a} python3-nbformat{a} python3-netcdf4{a} python3-networkx{a} python3-numpy{a} python3-openbabel{a} python3-packaging{a} python3-palettable{a} python3-pandas{a} python3-pandas-lib{a} python3-phonopy{a} python3-pil{a} python3-pil.imagetk{a} python3-pkg-resources{a} python3-platformdirs{a} python3-plotly{a} python3-pluggy{a} python3-pybtex{a} python3-pydantic{a} python3-pydantic-core{a} python3-pydantic-settings{a} python3-pygments{a} python3-pymatgen{a} python3-pyparsing{a} python3-pyproject-hooks{a} python3-pytest{a} python3-referencing{a} python3-requests{a} python3-roman{a} python3-rpds-py{a} python3-ruamel.yaml{a} python3-ruamel.yaml.clib{a} python3-scipy{a} python3-setuptools{a} python3-six{a} python3-snowballstemmer{a} python3-soupsieve{a} python3-spglib{a} python3-sphinx{a} python3-sphinx-rtd-theme{a} python3-sphinxcontrib.jquery{a} python3-sympy{a} python3-tabulate{a} python3-tenacity{a} python3-tk{a} python3-toml{a} python3-tqdm{a} python3-traitlets{a} python3-typeguard{a} python3-typing-extensions{a} python3-tz{a} python3-ufolib2{a} python3-uncertainties{a} python3-urllib3{a} python3-vtk9{a} python3-wheel{a} python3-yaml{a} python3-zipp{a} python3.12{a} python3.12-dev{a} python3.12-minimal{a} python3.12-tk{a} python3.13-tk{a} readline-common{a} sensible-utils{a} sgml-base{a} shared-mime-info{a} sphinx-common{a} sphinx-rtd-theme-common{a} tk8.6-blt2.5{a} tzdata{a} unicode-data{a} x11-common{a} xkb-data{a} xml-core{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl dbus ibverbs-providers isympy-common javascript-common krb5-locales libarchive-cpio-perl libglib2.0-data libjson-xs-perl libldap-common libltdl-dev libmail-sendmail-perl libmpich-dev libpaper-utils libqt5svg5 libsasl2-modules linux-sysctl-defaults lynx mesa-vulkan-drivers psmisc publicsuffix python-monty-doc python3-bottleneck python3-bson-ext python3-cryptography python3-cssselect python3-gdal python3-h2 python3-html5lib python3-httpcore python3-httpx python3-json-pointer python3-numexpr python3-odf python3-olefile python3-openpyxl python3-psutil python3-pydot python3-pygraphviz python3-rfc3987 python3-simplejson python3-tables python3-tomli python3-uritemplate python3-webcolors qt5-gtk-platformtheme qttranslations5-l10n qtwayland5 tcl wget xdg-user-dirs 0 packages upgraded, 371 newly installed, 0 to remove and 0 not upgraded. Need to get 498 MB of archives. After unpacking 1935 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main i386 fonts-lato all 2.015-1 [2780 kB] Get: 2 http://deb.debian.org/debian trixie/main i386 libpython3.12-minimal i386 3.12.7-3 [814 kB] Get: 3 http://deb.debian.org/debian trixie/main i386 libexpat1 i386 2.6.3-2 [107 kB] Get: 4 http://deb.debian.org/debian trixie/main i386 python3.12-minimal i386 3.12.7-3 [2236 kB] Get: 5 http://deb.debian.org/debian trixie/main i386 python3-minimal i386 3.12.6-1 [26.7 kB] Get: 6 http://deb.debian.org/debian trixie/main i386 media-types all 10.1.0 [26.9 kB] Get: 7 http://deb.debian.org/debian trixie/main i386 netbase all 6.4 [12.8 kB] Get: 8 http://deb.debian.org/debian trixie/main i386 tzdata all 2024b-3 [255 kB] Get: 9 http://deb.debian.org/debian trixie/main i386 libkrb5support0 i386 1.21.3-3 [34.9 kB] Get: 10 http://deb.debian.org/debian trixie/main i386 libcom-err2 i386 1.47.1-1+b1 [23.4 kB] Get: 11 http://deb.debian.org/debian trixie/main i386 libk5crypto3 i386 1.21.3-3 [83.6 kB] Get: 12 http://deb.debian.org/debian trixie/main i386 libkeyutils1 i386 1.6.3-4 [9600 B] Get: 13 http://deb.debian.org/debian trixie/main i386 libkrb5-3 i386 1.21.3-3 [350 kB] Get: 14 http://deb.debian.org/debian trixie/main i386 libgssapi-krb5-2 i386 1.21.3-3 [146 kB] Get: 15 http://deb.debian.org/debian trixie/main i386 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get: 16 http://deb.debian.org/debian trixie/main i386 libtirpc3t64 i386 1.3.4+ds-1.3+b1 [90.5 kB] Get: 17 http://deb.debian.org/debian trixie/main i386 libnsl2 i386 1.3.0-3+b3 [42.7 kB] Get: 18 http://deb.debian.org/debian trixie/main i386 readline-common all 8.2-5 [69.3 kB] Get: 19 http://deb.debian.org/debian trixie/main i386 libreadline8t64 i386 8.2-5 [173 kB] Get: 20 http://deb.debian.org/debian trixie/main i386 libpython3.12-stdlib i386 3.12.7-3 [1964 kB] Get: 21 http://deb.debian.org/debian trixie/main i386 python3.12 i386 3.12.7-3 [671 kB] Get: 22 http://deb.debian.org/debian trixie/main i386 libpython3-stdlib i386 3.12.6-1 [9692 B] Get: 23 http://deb.debian.org/debian trixie/main i386 python3 i386 3.12.6-1 [27.8 kB] Get: 24 http://deb.debian.org/debian trixie/main i386 sgml-base all 1.31 [15.4 kB] Get: 25 http://deb.debian.org/debian trixie/main i386 libproc2-0 i386 2:4.0.4-6 [65.7 kB] Get: 26 http://deb.debian.org/debian trixie/main i386 procps i386 2:4.0.4-6 [876 kB] Get: 27 http://deb.debian.org/debian trixie/main i386 sensible-utils all 0.0.24 [24.8 kB] Get: 28 http://deb.debian.org/debian trixie/main i386 openssl i386 3.3.2-2 [1387 kB] Get: 29 http://deb.debian.org/debian trixie/main i386 ca-certificates all 20240203 [158 kB] Get: 30 http://deb.debian.org/debian trixie/main i386 libmagic-mgc i386 1:5.45-3+b1 [314 kB] Get: 31 http://deb.debian.org/debian trixie/main i386 libmagic1t64 i386 1:5.45-3+b1 [115 kB] Get: 32 http://deb.debian.org/debian trixie/main i386 file i386 1:5.45-3+b1 [43.2 kB] Get: 33 http://deb.debian.org/debian trixie/main i386 gettext-base i386 0.22.5-2 [201 kB] Get: 34 http://deb.debian.org/debian trixie/main i386 libuchardet0 i386 0.0.8-1+b2 [69.2 kB] Get: 35 http://deb.debian.org/debian trixie/main i386 groff-base i386 1.23.0-5 [1196 kB] Get: 36 http://deb.debian.org/debian trixie/main i386 bsdextrautils i386 2.40.2-9 [102 kB] Get: 37 http://deb.debian.org/debian trixie/main i386 libpipeline1 i386 1.5.8-1 [41.2 kB] Get: 38 http://deb.debian.org/debian trixie/main i386 man-db i386 2.13.0-1 [1428 kB] Get: 39 http://deb.debian.org/debian trixie/main i386 m4 i386 1.4.19-4 [293 kB] Get: 40 http://deb.debian.org/debian trixie/main i386 autoconf all 2.72-3 [493 kB] Get: 41 http://deb.debian.org/debian trixie/main i386 autotools-dev all 20220109.1 [51.6 kB] Get: 42 http://deb.debian.org/debian trixie/main i386 automake all 1:1.16.5-1.3 [823 kB] Get: 43 http://deb.debian.org/debian trixie/main i386 autopoint all 0.22.5-2 [723 kB] Get: 44 http://deb.debian.org/debian trixie/main i386 libtcl8.6 i386 8.6.15+dfsg-2 [1103 kB] Get: 45 http://deb.debian.org/debian trixie/main i386 libbrotli1 i386 1.1.0-2+b5 [298 kB] Get: 46 http://deb.debian.org/debian trixie/main i386 libpng16-16t64 i386 1.6.44-2 [288 kB] Get: 47 http://deb.debian.org/debian trixie/main i386 libfreetype6 i386 2.13.3+dfsg-1 [464 kB] Get: 48 http://deb.debian.org/debian trixie/main i386 fonts-dejavu-mono all 2.37-8 [489 kB] Get: 49 http://deb.debian.org/debian trixie/main i386 fonts-dejavu-core all 2.37-8 [840 kB] Get: 50 http://deb.debian.org/debian trixie/main i386 fontconfig-config i386 2.15.0-1.1+b1 [318 kB] Get: 51 http://deb.debian.org/debian trixie/main i386 libfontconfig1 i386 2.15.0-1.1+b1 [402 kB] Get: 52 http://deb.debian.org/debian trixie/main i386 libxau6 i386 1:1.0.11-1 [20.7 kB] Get: 53 http://deb.debian.org/debian trixie/main i386 libxdmcp6 i386 1:1.1.2-3+b2 [24.9 kB] Get: 54 http://deb.debian.org/debian trixie/main i386 libxcb1 i386 1.17.0-2+b1 [148 kB] Get: 55 http://deb.debian.org/debian trixie/main i386 libx11-data all 2:1.8.10-2 [337 kB] Get: 56 http://deb.debian.org/debian trixie/main i386 libx11-6 i386 2:1.8.10-2 [834 kB] Get: 57 http://deb.debian.org/debian trixie/main i386 libxrender1 i386 1:0.9.10-1.1+b2 [28.9 kB] Get: 58 http://deb.debian.org/debian trixie/main i386 libxft2 i386 2.3.6-1+b2 [55.3 kB] Get: 59 http://deb.debian.org/debian trixie/main i386 libxext6 i386 2:1.3.4-1+b2 [52.6 kB] Get: 60 http://deb.debian.org/debian trixie/main i386 x11-common all 1:7.7+23.1 [216 kB] Get: 61 http://deb.debian.org/debian trixie/main i386 libxss1 i386 1:1.2.3-1+b2 [17.3 kB] Get: 62 http://deb.debian.org/debian trixie/main i386 libtk8.6 i386 8.6.15-1 [833 kB] Get: 63 http://deb.debian.org/debian trixie/main i386 tk8.6-blt2.5 i386 2.5.3+dfsg-7 [616 kB] Get: 64 http://deb.debian.org/debian trixie/main i386 blt i386 2.5.3+dfsg-7 [6024 B] Get: 65 http://deb.debian.org/debian trixie/main i386 cython3 i386 3.0.11+dfsg-1 [2429 kB] Get: 66 http://deb.debian.org/debian trixie/main i386 libdebhelper-perl all 13.20 [89.7 kB] Get: 67 http://deb.debian.org/debian trixie/main i386 libtool all 2.4.7-8 [517 kB] Get: 68 http://deb.debian.org/debian trixie/main i386 dh-autoreconf all 20 [17.1 kB] Get: 69 http://deb.debian.org/debian trixie/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 70 http://deb.debian.org/debian trixie/main i386 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 71 http://deb.debian.org/debian trixie/main i386 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 72 http://deb.debian.org/debian trixie/main i386 libelf1t64 i386 0.192-4 [195 kB] Get: 73 http://deb.debian.org/debian trixie/main i386 dwz i386 0.15-1+b1 [116 kB] Get: 74 http://deb.debian.org/debian trixie/main i386 libicu72 i386 72.1-5+b1 [9583 kB] Get: 75 http://deb.debian.org/debian trixie/main i386 libxml2 i386 2.12.7+dfsg+really2.9.14-0.1 [733 kB] Get: 76 http://deb.debian.org/debian trixie/main i386 gettext i386 0.22.5-2 [1631 kB] Get: 77 http://deb.debian.org/debian trixie/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 78 http://deb.debian.org/debian trixie/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 79 http://deb.debian.org/debian trixie/main i386 debhelper all 13.20 [915 kB] Get: 80 http://deb.debian.org/debian trixie/main i386 python3-autocommand all 2.2.2-3 [13.6 kB] Get: 81 http://deb.debian.org/debian trixie/main i386 python3-more-itertools all 10.5.0-1 [63.8 kB] Get: 82 http://deb.debian.org/debian trixie/main i386 python3-typing-extensions all 4.12.2-2 [73.0 kB] Get: 83 http://deb.debian.org/debian trixie/main i386 python3-typeguard all 4.4.1-1 [37.0 kB] Get: 84 http://deb.debian.org/debian trixie/main i386 python3-inflect all 7.3.1-2 [32.4 kB] Get: 85 http://deb.debian.org/debian trixie/main i386 python3-jaraco.context all 6.0.0-1 [7984 B] Get: 86 http://deb.debian.org/debian trixie/main i386 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 87 http://deb.debian.org/debian trixie/main i386 python3-pkg-resources all 74.1.2-2 [213 kB] Get: 88 http://deb.debian.org/debian trixie/main i386 python3-zipp all 3.21.0-1 [10.6 kB] Get: 89 http://deb.debian.org/debian trixie/main i386 python3-setuptools all 74.1.2-2 [736 kB] Get: 90 http://deb.debian.org/debian trixie/main i386 dh-python all 6.20241024 [109 kB] Get: 91 http://deb.debian.org/debian trixie/main i386 xml-core all 0.19 [20.1 kB] Get: 92 http://deb.debian.org/debian trixie/main i386 docutils-common all 0.21.2+dfsg-2 [128 kB] Get: 93 http://deb.debian.org/debian trixie/main i386 fontconfig i386 2.15.0-1.1+b1 [463 kB] Get: 94 http://deb.debian.org/debian trixie/main i386 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [517 kB] Get: 95 http://deb.debian.org/debian trixie/main i386 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [162 kB] Get: 96 http://deb.debian.org/debian trixie/main i386 fonts-lyx all 2.4.2.1-1 [190 kB] Get: 97 http://deb.debian.org/debian trixie/main i386 fonts-mathjax all 2.7.9+dfsg-1 [2210 kB] Get: 98 http://deb.debian.org/debian trixie/main i386 libhwloc15 i386 2.11.2-1 [177 kB] Get: 99 http://deb.debian.org/debian trixie/main i386 hwloc-nox i386 2.11.2-1 [229 kB] Get: 100 http://deb.debian.org/debian trixie/main i386 libaec0 i386 1.1.3-1+b1 [25.0 kB] Get: 101 http://deb.debian.org/debian trixie/main i386 libblas3 i386 3.12.0-3+b1 [143 kB] Get: 102 http://deb.debian.org/debian trixie/main i386 libpixman-1-0 i386 0.42.2-1+b1 [555 kB] Get: 103 http://deb.debian.org/debian trixie/main i386 libxcb-render0 i386 1.17.0-2+b1 [116 kB] Get: 104 http://deb.debian.org/debian trixie/main i386 libxcb-shm0 i386 1.17.0-2+b1 [105 kB] Get: 105 http://deb.debian.org/debian trixie/main i386 libcairo2 i386 1.18.2-2 [591 kB] Get: 106 http://deb.debian.org/debian trixie/main i386 libsasl2-modules-db i386 2.1.28+dfsg1-8 [20.6 kB] Get: 107 http://deb.debian.org/debian trixie/main i386 libsasl2-2 i386 2.1.28+dfsg1-8 [61.0 kB] Get: 108 http://deb.debian.org/debian trixie/main i386 libldap-2.5-0 i386 2.5.18+dfsg-3+b1 [200 kB] Get: 109 http://deb.debian.org/debian trixie/main i386 libnghttp2-14 i386 1.64.0-1 [82.4 kB] Get: 110 http://deb.debian.org/debian trixie/main i386 libnghttp3-9 i386 1.4.0-1+b1 [74.9 kB] Get: 111 http://deb.debian.org/debian trixie/main i386 libngtcp2-16 i386 1.6.0-1 [154 kB] Get: 112 http://deb.debian.org/debian trixie/main i386 libngtcp2-crypto-gnutls8 i386 1.6.0-1 [20.2 kB] Get: 113 http://deb.debian.org/debian trixie/main i386 libpsl5t64 i386 0.21.2-1.1+b1 [57.7 kB] Get: 114 http://deb.debian.org/debian trixie/main i386 librtmp1 i386 2.4+20151223.gitfa8646d.1-2+b5 [62.4 kB] Get: 115 http://deb.debian.org/debian trixie/main i386 libssh2-1t64 i386 1.11.1-1 [256 kB] Get: 116 http://deb.debian.org/debian trixie/main i386 libcurl3t64-gnutls i386 8.11.0-1 [403 kB] Get: 117 http://deb.debian.org/debian trixie/main i386 libcurl4t64 i386 8.11.0-1 [392 kB] Get: 118 http://deb.debian.org/debian trixie/main i386 libdbus-1-3 i386 1.14.10-6 [217 kB] Get: 119 http://deb.debian.org/debian trixie/main i386 libdeflate0 i386 1.22-1 [48.1 kB] Get: 120 http://deb.debian.org/debian trixie/main i386 libdouble-conversion3 i386 3.3.0-1+b2 [45.7 kB] Get: 121 http://deb.debian.org/debian trixie/main i386 libdrm-common all 2.4.123-1 [8084 B] Get: 122 http://deb.debian.org/debian trixie/main i386 libdrm2 i386 2.4.123-1 [41.8 kB] Get: 123 http://deb.debian.org/debian trixie/main i386 libdrm-amdgpu1 i386 2.4.123-1 [25.0 kB] Get: 124 http://deb.debian.org/debian trixie/main i386 libpciaccess0 i386 0.17-3+b2 [53.8 kB] Get: 125 http://deb.debian.org/debian trixie/main i386 libdrm-intel1 i386 2.4.123-1 [66.8 kB] Get: 126 http://deb.debian.org/debian trixie/main i386 libdrm-radeon1 i386 2.4.123-1 [23.0 kB] Get: 127 http://deb.debian.org/debian trixie/main i386 libedit2 i386 3.1-20240808-1 [98.0 kB] Get: 128 http://deb.debian.org/debian trixie/main i386 libwayland-server0 i386 1.23.0-1+b1 [35.9 kB] Get: 129 http://deb.debian.org/debian trixie/main i386 libxcb-randr0 i386 1.17.0-2+b1 [118 kB] Get: 130 http://deb.debian.org/debian trixie/main i386 libglapi-mesa i386 24.2.6-1 [37.8 kB] Get: 131 http://deb.debian.org/debian trixie/main i386 libz3-4 i386 4.13.3-1 [9211 kB] Get: 132 http://deb.debian.org/debian trixie/main i386 libllvm19 i386 1:19.1.3-1 [30.4 MB] Get: 133 http://deb.debian.org/debian trixie/main i386 libsensors-config all 1:3.6.0-10 [14.6 kB] Get: 134 http://deb.debian.org/debian trixie/main i386 libsensors5 i386 1:3.6.0-10+b1 [35.8 kB] Get: 135 http://deb.debian.org/debian trixie/main i386 libx11-xcb1 i386 2:1.8.10-2 [241 kB] Get: 136 http://deb.debian.org/debian trixie/main i386 libxcb-dri2-0 i386 1.17.0-2+b1 [107 kB] Get: 137 http://deb.debian.org/debian trixie/main i386 libxcb-dri3-0 i386 1.17.0-2+b1 [107 kB] Get: 138 http://deb.debian.org/debian trixie/main i386 libxcb-present0 i386 1.17.0-2+b1 [106 kB] Get: 139 http://deb.debian.org/debian trixie/main i386 libxcb-sync1 i386 1.17.0-2+b1 [109 kB] Get: 140 http://deb.debian.org/debian trixie/main i386 libxcb-xfixes0 i386 1.17.0-2+b1 [110 kB] Get: 141 http://deb.debian.org/debian trixie/main i386 libxshmfence1 i386 1.3-1+b2 [8992 B] Get: 142 http://deb.debian.org/debian trixie/main i386 mesa-libgallium i386 24.2.6-1 [9406 kB] Get: 143 http://deb.debian.org/debian trixie/main i386 libgbm1 i386 24.2.6-1 [43.9 kB] Get: 144 http://deb.debian.org/debian trixie/main i386 libwayland-client0 i386 1.23.0-1+b1 [27.2 kB] Get: 145 http://deb.debian.org/debian trixie/main i386 libegl-mesa0 i386 24.2.6-1 [140 kB] Get: 146 http://deb.debian.org/debian trixie/main i386 libevdev2 i386 1.13.3+dfsg-1 [30.4 kB] Get: 147 http://deb.debian.org/debian trixie/main i386 libevent-core-2.1-7t64 i386 2.1.12-stable-10+b1 [140 kB] Get: 148 http://deb.debian.org/debian trixie/main i386 libevent-pthreads-2.1-7t64 i386 2.1.12-stable-10+b1 [54.4 kB] Get: 149 http://deb.debian.org/debian trixie/main i386 libexpat1-dev i386 2.6.3-2 [165 kB] Get: 150 http://deb.debian.org/debian trixie/main i386 libnl-3-200 i386 3.7.0-0.3+b1 [62.3 kB] Get: 151 http://deb.debian.org/debian trixie/main i386 libnl-route-3-200 i386 3.7.0-0.3+b1 [194 kB] Get: 152 http://deb.debian.org/debian trixie/main i386 libibverbs1 i386 52.0-2+b1 [66.8 kB] Get: 153 http://deb.debian.org/debian trixie/main i386 libpsm-infinipath1 i386 3.3+20.604758e7-6.3 [177 kB] Get: 154 http://deb.debian.org/debian trixie/main i386 librdmacm1t64 i386 52.0-2+b1 [76.7 kB] Get: 155 http://deb.debian.org/debian trixie/main i386 libfabric1 i386 1.17.0-3.1 [542 kB] Get: 156 http://deb.debian.org/debian trixie/main i386 libfribidi0 i386 1.0.15-1 [72.4 kB] Get: 157 http://deb.debian.org/debian trixie/main i386 libgfortran5 i386 14.2.0-8 [735 kB] Get: 158 http://deb.debian.org/debian trixie/main i386 libglvnd0 i386 1.7.0-1+b2 [44.1 kB] Get: 159 http://deb.debian.org/debian trixie/main i386 libxcb-glx0 i386 1.17.0-2+b1 [124 kB] Get: 160 http://deb.debian.org/debian trixie/main i386 libxfixes3 i386 1:6.0.0-2+b2 [20.7 kB] Get: 161 http://deb.debian.org/debian trixie/main i386 libxxf86vm1 i386 1:1.1.4-1+b3 [20.1 kB] Get: 162 http://deb.debian.org/debian trixie/main i386 libvulkan1 i386 1.3.296.0-1 [136 kB] Get: 163 http://deb.debian.org/debian trixie/main i386 libgl1-mesa-dri i386 24.2.6-1 [42.4 kB] Get: 164 http://deb.debian.org/debian trixie/main i386 libglx-mesa0 i386 24.2.6-1 [160 kB] Get: 165 http://deb.debian.org/debian trixie/main i386 libglx0 i386 1.7.0-1+b2 [36.8 kB] Get: 166 http://deb.debian.org/debian trixie/main i386 libgl1 i386 1.7.0-1+b2 [82.7 kB] Get: 167 http://deb.debian.org/debian trixie/main i386 libgl2ps1.4 i386 1.4.2+dfsg1-2 [42.0 kB] Get: 168 http://deb.debian.org/debian trixie/main i386 libglew2.2 i386 2.2.0-4+b2 [163 kB] Get: 169 http://deb.debian.org/debian trixie/main i386 libglib2.0-0t64 i386 2.82.2-2 [1570 kB] Get: 170 http://deb.debian.org/debian trixie/main i386 libgraphite2-3 i386 1.3.14-2+b1 [77.8 kB] Get: 171 http://deb.debian.org/debian trixie/main i386 libgudev-1.0-0 i386 238-5+b1 [15.2 kB] Get: 172 http://deb.debian.org/debian trixie/main i386 libharfbuzz0b i386 10.0.1-1 [503 kB] Get: 173 http://deb.debian.org/debian trixie/main i386 libsz2 i386 1.1.3-1+b1 [8128 B] Get: 174 http://deb.debian.org/debian trixie/main i386 libhdf5-103-1t64 i386 1.10.10+repack-4 [1186 kB] Get: 175 http://deb.debian.org/debian trixie/main i386 libhdf5-hl-100t64 i386 1.10.10+repack-4 [76.0 kB] Get: 176 http://deb.debian.org/debian trixie/main i386 libxnvctrl0 i386 535.171.04-1+b1 [14.1 kB] Get: 177 http://deb.debian.org/debian trixie/main i386 ocl-icd-libopencl1 i386 2.3.2-1+b2 [43.6 kB] Get: 178 http://deb.debian.org/debian trixie/main i386 libhwloc-plugins i386 2.11.2-1 [18.3 kB] Get: 179 http://deb.debian.org/debian trixie/main i386 libice6 i386 2:1.1.1-1 [67.8 kB] Get: 180 http://deb.debian.org/debian trixie/main i386 libimagequant0 i386 2.18.0-1+b2 [36.0 kB] Get: 181 http://deb.debian.org/debian trixie/main i386 libinchi1.07 i386 1.07.1+dfsg-4 [555 kB] Get: 182 http://deb.debian.org/debian trixie/main i386 libwacom-common all 2.13.0-1 [98.0 kB] Get: 183 http://deb.debian.org/debian trixie/main i386 libwacom9 i386 2.13.0-1 [25.8 kB] Get: 184 http://deb.debian.org/debian trixie/main i386 libinput-bin i386 1.26.2-1 [25.6 kB] Get: 185 http://deb.debian.org/debian trixie/main i386 libmtdev1t64 i386 1.1.6-1.2+b1 [23.0 kB] Get: 186 http://deb.debian.org/debian trixie/main i386 libinput10 i386 1.26.2-1 [146 kB] Get: 187 http://deb.debian.org/debian trixie/main i386 libjbig0 i386 2.1-6.1+b2 [32.2 kB] Get: 188 http://deb.debian.org/debian trixie/main i386 libjpeg62-turbo i386 1:2.1.5-3+b1 [171 kB] Get: 189 http://deb.debian.org/debian trixie/main i386 libjs-bootstrap all 3.4.1+dfsg-3 [172 kB] Get: 190 http://deb.debian.org/debian trixie/main i386 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 191 http://deb.debian.org/debian trixie/main i386 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get: 192 http://deb.debian.org/debian trixie/main i386 libjs-mathjax all 2.7.9+dfsg-1 [5667 kB] Get: 193 http://deb.debian.org/debian trixie/main i386 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 194 http://deb.debian.org/debian trixie/main i386 libjs-sphinxdoc all 7.4.7-4 [158 kB] Get: 195 http://deb.debian.org/debian trixie/main i386 libjson-perl all 4.10000-1 [87.5 kB] Get: 196 http://deb.debian.org/debian trixie/main i386 libjsoncpp26 i386 1.9.6-2 [90.0 kB] Get: 197 http://deb.debian.org/debian trixie/main i386 liblapack3 i386 3.12.0-3+b1 [2196 kB] Get: 198 http://deb.debian.org/debian trixie/main i386 liblbfgsb0 i386 3.0+dfsg.4-1+b2 [29.5 kB] Get: 199 http://deb.debian.org/debian trixie/main i386 liblcms2-2 i386 2.16-2 [171 kB] Get: 200 http://deb.debian.org/debian trixie/main i386 liblerc4 i386 4.0.0+ds-5 [191 kB] Get: 201 http://deb.debian.org/debian trixie/main i386 liblzf1 i386 3.6-4+b2 [9864 B] Get: 202 http://deb.debian.org/debian trixie/main i386 libmaeparser1 i386 1.3.1-1+b2 [99.3 kB] Get: 203 http://deb.debian.org/debian trixie/main i386 libmd4c0 i386 0.5.2-2+b1 [49.2 kB] Get: 204 http://deb.debian.org/debian trixie/main i386 libmpich12 i386 4.2.0-14 [1518 kB] Get: 205 http://deb.debian.org/debian trixie/main i386 libnetcdf19t64 i386 1:4.9.2-7 [528 kB] Get: 206 http://deb.debian.org/debian trixie/main i386 libogg0 i386 1.3.5-3+b2 [24.6 kB] Get: 207 http://deb.debian.org/debian trixie/main i386 libopenbabel7 i386 3.1.1+dfsg-11+b1 [3372 kB] Get: 208 http://deb.debian.org/debian trixie/main i386 libopenjp2-7 i386 2.5.0-2+b4 [210 kB] Get: 209 http://deb.debian.org/debian trixie/main i386 libopenmpi3t64 i386 4.1.6-13.3 [2626 kB] Get: 210 http://deb.debian.org/debian trixie/main i386 libpcre2-16-0 i386 10.42-4+b2 [249 kB] Get: 211 http://deb.debian.org/debian trixie/main i386 proj-data all 9.5.0-1 [6293 kB] Get: 212 http://deb.debian.org/debian trixie/main i386 libsharpyuv0 i386 1.4.0-0.1+b1 [113 kB] Get: 213 http://deb.debian.org/debian trixie/main i386 libwebp7 i386 1.4.0-0.1+b1 [322 kB] Get: 214 http://deb.debian.org/debian trixie/main i386 libtiff6 i386 4.5.1+git230720-5 [339 kB] Get: 215 http://deb.debian.org/debian trixie/main i386 libproj25 i386 9.5.0-1 [1513 kB] Get: 216 http://deb.debian.org/debian trixie/main i386 libpython3.12t64 i386 3.12.7-3 [2170 kB] Get: 217 http://deb.debian.org/debian trixie/main i386 zlib1g-dev i386 1:1.3.dfsg+really1.3.1-1+b1 [916 kB] Get: 218 http://deb.debian.org/debian trixie/main i386 libpython3.12-dev i386 3.12.7-3 [5282 kB] Get: 219 http://deb.debian.org/debian trixie/main i386 libpython3-dev i386 3.12.6-1 [9956 B] Get: 220 http://deb.debian.org/debian trixie/main i386 libpython3-all-dev i386 3.12.6-1 [1068 B] Get: 221 http://deb.debian.org/debian trixie/main i386 libqhull-r8.0 i386 2020.2-6+b2 [259 kB] Get: 222 http://deb.debian.org/debian trixie/main i386 shared-mime-info i386 2.4-5+b1 [761 kB] Get: 223 http://deb.debian.org/debian trixie/main i386 libqt5core5t64 i386 5.15.15+dfsg-2 [2719 kB] Get: 224 http://deb.debian.org/debian trixie/main i386 libqt5dbus5t64 i386 5.15.15+dfsg-2 [238 kB] Get: 225 http://deb.debian.org/debian trixie/main i386 libegl1 i386 1.7.0-1+b2 [36.4 kB] Get: 226 http://deb.debian.org/debian trixie/main i386 libqt5network5t64 i386 5.15.15+dfsg-2 [771 kB] Get: 227 http://deb.debian.org/debian trixie/main i386 libsm6 i386 2:1.2.4-1 [35.9 kB] Get: 228 http://deb.debian.org/debian trixie/main i386 libxcb-icccm4 i386 0.4.2-1 [28.2 kB] Get: 229 http://deb.debian.org/debian trixie/main i386 libxcb-util1 i386 0.4.0-1+b2 [22.8 kB] Get: 230 http://deb.debian.org/debian trixie/main i386 libxcb-image0 i386 0.4.0-2+b2 [22.7 kB] Get: 231 http://deb.debian.org/debian trixie/main i386 libxcb-keysyms1 i386 0.4.0-1+b3 [15.9 kB] Get: 232 http://deb.debian.org/debian trixie/main i386 libxcb-render-util0 i386 0.3.9-1+b2 [17.8 kB] Get: 233 http://deb.debian.org/debian trixie/main i386 libxcb-shape0 i386 1.17.0-2+b1 [106 kB] Get: 234 http://deb.debian.org/debian trixie/main i386 libxcb-xinerama0 i386 1.17.0-2+b1 [105 kB] Get: 235 http://deb.debian.org/debian trixie/main i386 libxcb-xinput0 i386 1.17.0-2+b1 [133 kB] Get: 236 http://deb.debian.org/debian trixie/main i386 libxcb-xkb1 i386 1.17.0-2+b1 [131 kB] Get: 237 http://deb.debian.org/debian trixie/main i386 xkb-data all 2.42-1 [790 kB] Get: 238 http://deb.debian.org/debian trixie/main i386 libxkbcommon0 i386 1.6.0-1+b2 [116 kB] Get: 239 http://deb.debian.org/debian trixie/main i386 libxkbcommon-x11-0 i386 1.6.0-1+b2 [17.1 kB] Get: 240 http://deb.debian.org/debian trixie/main i386 libqt5gui5t64 i386 5.15.15+dfsg-2 [6050 kB] Get: 241 http://deb.debian.org/debian trixie/main i386 libqt5widgets5t64 i386 5.15.15+dfsg-2 [2677 kB] Get: 242 http://deb.debian.org/debian trixie/main i386 libraqm0 i386 0.10.1-1+b2 [14.8 kB] Get: 243 http://deb.debian.org/debian trixie/main i386 libslurm41t64 i386 24.05.4-1 [739 kB] Get: 244 http://deb.debian.org/debian trixie/main i386 libsymspg2 i386 2.5.0-1 [203 kB] Get: 245 http://deb.debian.org/debian trixie/main i386 libtbbmalloc2 i386 2021.12.0-1 [48.8 kB] Get: 246 http://deb.debian.org/debian trixie/main i386 libtbbbind-2-5 i386 2021.12.0-1 [14.5 kB] Get: 247 http://deb.debian.org/debian trixie/main i386 libtbb12 i386 2021.12.0-1 [89.9 kB] Get: 248 http://deb.debian.org/debian trixie/main i386 libtheora0 i386 1.1.1+dfsg.1-17 [152 kB] Get: 249 http://deb.debian.org/debian trixie/main i386 libopengl0 i386 1.7.0-1+b2 [29.3 kB] Get: 250 http://deb.debian.org/debian trixie/main i386 libvtk9.3 i386 9.3.0+dfsg1-1+b3 [24.5 MB] Get: 251 http://deb.debian.org/debian trixie/main i386 libvtk9.3-qt i386 9.3.0+dfsg1-1+b3 [189 kB] Get: 252 http://deb.debian.org/debian trixie/main i386 libwebpdemux2 i386 1.4.0-0.1+b1 [111 kB] Get: 253 http://deb.debian.org/debian trixie/main i386 libwebpmux3 i386 1.4.0-0.1+b1 [125 kB] Get: 254 http://deb.debian.org/debian trixie/main i386 libxslt1.1 i386 1.1.35-1.1+b1 [243 kB] Get: 255 http://deb.debian.org/debian trixie/main i386 libyaml-0-2 i386 0.2.5-1+b2 [56.0 kB] Get: 256 http://deb.debian.org/debian trixie/main i386 mpich i386 4.2.0-14 [235 kB] Get: 257 http://deb.debian.org/debian trixie/main i386 mpi-default-bin i386 1.17 [2372 B] Get: 258 http://deb.debian.org/debian trixie/main i386 packmol i386 1:20.14.3-1 [112 kB] Get: 259 http://deb.debian.org/debian trixie/main i386 python3-packaging all 24.1-1 [45.8 kB] Get: 260 http://deb.debian.org/debian trixie/main i386 python3-pyproject-hooks all 1.2.0-1 [11.7 kB] Get: 261 http://deb.debian.org/debian trixie/main i386 python3-toml all 0.10.2-1 [16.2 kB] Get: 262 http://deb.debian.org/debian trixie/main i386 python3-wheel all 0.44.0-2 [53.4 kB] Get: 263 http://deb.debian.org/debian trixie/main i386 python3-build all 1.2.2-1 [36.0 kB] Get: 264 http://deb.debian.org/debian trixie/main i386 python3-installer all 0.7.0+dfsg1-3 [18.6 kB] Get: 265 http://deb.debian.org/debian trixie/main i386 pybuild-plugin-pyproject all 6.20241024 [11.4 kB] Get: 266 http://deb.debian.org/debian trixie/main i386 pymatgen-test-files all 2024.10.29-1 [209 MB] Get: 267 http://deb.debian.org/debian trixie/main i386 python-babel-localedata all 2.14.0-1 [5701 kB] Get: 268 http://deb.debian.org/debian trixie/main i386 python-matplotlib-data all 3.8.3-3 [2731 kB] Get: 269 http://deb.debian.org/debian trixie/main i386 python3-alabaster all 0.7.16-0.1 [27.9 kB] Get: 270 http://deb.debian.org/debian trixie/main i386 python3-all i386 3.12.6-1 [1040 B] Get: 271 http://deb.debian.org/debian trixie/main i386 python3.12-dev i386 3.12.7-3 [505 kB] Get: 272 http://deb.debian.org/debian trixie/main i386 python3-dev i386 3.12.6-1 [26.1 kB] Get: 273 http://deb.debian.org/debian trixie/main i386 python3-all-dev i386 3.12.6-1 [1068 B] Get: 274 http://deb.debian.org/debian trixie/main i386 python3-annotated-types all 0.7.0-1 [18.8 kB] Get: 275 http://deb.debian.org/debian trixie/main i386 python3-appdirs all 1.4.4-4 [12.5 kB] Get: 276 http://deb.debian.org/debian trixie/main i386 python3-numpy i386 1:1.26.4+ds-11 [4299 kB] Get: 277 http://deb.debian.org/debian trixie/main i386 python3-decorator all 5.1.1-5 [15.1 kB] Get: 278 http://deb.debian.org/debian trixie/main i386 python3-scipy i386 1.13.1-5 [16.6 MB] Get: 279 http://deb.debian.org/debian trixie/main i386 python3-spglib i386 2.5.0-1 [52.9 kB] Get: 280 http://deb.debian.org/debian trixie/main i386 python3-dateutil all 2.9.0-3 [79.3 kB] Get: 281 http://deb.debian.org/debian trixie/main i386 python3-pil i386 10.4.0-1 [503 kB] Get: 282 http://deb.debian.org/debian trixie/main i386 python3.12-tk i386 3.12.7-3 [113 kB] Get: 283 http://deb.debian.org/debian trixie/main i386 python3.13-tk i386 3.13.0-1 [103 kB] Get: 284 http://deb.debian.org/debian trixie/main i386 python3-tk i386 3.12.6-1 [9428 B] Get: 285 http://deb.debian.org/debian trixie/main i386 python3-pil.imagetk i386 10.4.0-1 [79.6 kB] Get: 286 http://deb.debian.org/debian trixie/main i386 python3-pyparsing all 3.1.2-1 [146 kB] Get: 287 http://deb.debian.org/debian trixie/main i386 python3-contourpy i386 1.3.0-2 [223 kB] Get: 288 http://deb.debian.org/debian trixie/main i386 python3-cycler all 0.12.1-1 [9496 B] Get: 289 http://deb.debian.org/debian trixie/main i386 python3-brotli i386 1.1.0-2+b5 [319 kB] Get: 290 http://deb.debian.org/debian trixie/main i386 python3-tz all 2024.1-2 [30.9 kB] Get: 291 http://deb.debian.org/debian trixie/main i386 python3-six all 1.16.0-7 [16.4 kB] Get: 292 http://deb.debian.org/debian trixie/main i386 python3-fs all 2.4.16-4 [95.4 kB] Get: 293 http://deb.debian.org/debian trixie/main i386 python3-lxml i386 5.3.0-1 [1239 kB] Get: 294 http://deb.debian.org/debian trixie/main i386 python3-lz4 i386 4.0.2+dfsg-1+b4 [25.2 kB] Get: 295 http://deb.debian.org/debian trixie/main i386 python3-mpmath all 1.3.0-1 [419 kB] Get: 296 http://deb.debian.org/debian trixie/main i386 python3-sympy all 1.13.3-1 [4147 kB] Get: 297 http://deb.debian.org/debian trixie/main i386 python3-attr all 23.2.0-2 [65.5 kB] Get: 298 http://deb.debian.org/debian trixie/main i386 python3-ufolib2 all 0.16.0+dfsg1-1 [32.9 kB] Get: 299 http://deb.debian.org/debian trixie/main i386 unicode-data all 15.1.0-1 [8547 kB] Get: 300 http://deb.debian.org/debian trixie/main i386 python3-fonttools i386 4.54.1-4 [1424 kB] Get: 301 http://deb.debian.org/debian trixie/main i386 python3-kiwisolver i386 1.4.7-2 [68.6 kB] Get: 302 http://deb.debian.org/debian trixie/main i386 python3-matplotlib i386 3.8.3-3 [5569 kB] Get: 303 http://deb.debian.org/debian trixie/main i386 python3-ase all 3.23.0-1 [1698 kB] Get: 304 http://deb.debian.org/debian trixie/main i386 python3-babel all 2.14.0-1 [111 kB] Get: 305 http://deb.debian.org/debian trixie/main i386 python3-soupsieve all 2.6-1 [38.3 kB] Get: 306 http://deb.debian.org/debian trixie/main i386 python3-bs4 all 4.12.3-3 [133 kB] Get: 307 http://deb.debian.org/debian trixie/main i386 python3-bson all 4.10.1-2 [87.0 kB] Get: 308 http://deb.debian.org/debian trixie/main i386 python3-certifi all 2024.8.30+dfsg-1 [9576 B] Get: 309 http://deb.debian.org/debian trixie/main i386 python3-cftime i386 1.6.4-1+b1 [205 kB] Get: 310 http://deb.debian.org/debian trixie/main i386 python3-chardet all 5.2.0+dfsg-1 [107 kB] Get: 311 http://deb.debian.org/debian trixie/main i386 python3-charset-normalizer i386 3.4.0-1 [120 kB] Get: 312 http://deb.debian.org/debian trixie/main i386 python3-defusedxml all 0.7.1-2 [43.3 kB] Get: 313 http://deb.debian.org/debian trixie/main i386 python3-dnspython all 2.6.1-1 [161 kB] Get: 314 http://deb.debian.org/debian trixie/main i386 python3-roman all 4.2-1 [10.4 kB] Get: 315 http://deb.debian.org/debian trixie/main i386 python3-docutils all 0.21.2+dfsg-2 [403 kB] Get: 316 http://deb.debian.org/debian trixie/main i386 python3-dotenv all 1.0.1-1 [26.6 kB] Get: 317 http://deb.debian.org/debian trixie/main i386 python3-idna all 3.8-2 [41.6 kB] Get: 318 http://deb.debian.org/debian trixie/main i386 python3-email-validator all 2.2.0-1 [31.6 kB] Get: 319 http://deb.debian.org/debian trixie/main i386 python3-pandas-lib i386 2.2.3+dfsg-5 [4263 kB] Get: 320 http://deb.debian.org/debian trixie/main i386 python3-pandas all 2.2.3+dfsg-5 [3096 kB] Get: 321 http://deb.debian.org/debian trixie/main i386 python3-pydantic-core i386 2.23.4-2+b1 [1398 kB] Get: 322 http://deb.debian.org/debian trixie/main i386 python3-pydantic i386 2.9.2-2 [343 kB] Get: 323 http://deb.debian.org/debian trixie/main i386 python3-tqdm all 4.66.5-1 [90.1 kB] Get: 324 http://deb.debian.org/debian trixie/main i386 python3-monty all 2024.7.29-1 [43.1 kB] Get: 325 http://deb.debian.org/debian trixie/main i386 python3-latexcodec all 3.0.0-1 [17.5 kB] Get: 326 http://deb.debian.org/debian trixie/main i386 python3-yaml i386 6.0.2-1 [134 kB] Get: 327 http://deb.debian.org/debian trixie/main i386 python3-pybtex all 0.24.0-4 [74.6 kB] Get: 328 http://deb.debian.org/debian trixie/main i386 python3-pydantic-settings all 2.6.1-1 [40.8 kB] Get: 329 http://deb.debian.org/debian trixie/main i386 python3-joblib all 1.3.2-5 [216 kB] Get: 330 http://deb.debian.org/debian trixie/main i386 python3-networkx all 3.2.1-4 [14.2 MB] Get: 331 http://deb.debian.org/debian trixie/main i386 python3-palettable all 3.3.3-1 [69.7 kB] Get: 332 http://deb.debian.org/debian trixie/main i386 python3-urllib3 all 2.0.7-2 [111 kB] Get: 333 http://deb.debian.org/debian trixie/main i386 python3-requests all 2.32.3+dfsg-1 [71.9 kB] Get: 334 http://deb.debian.org/debian trixie/main i386 python3-fastjsonschema all 2.20.0-1 [21.8 kB] Get: 335 http://deb.debian.org/debian trixie/main i386 python3-rpds-py i386 0.20.1-1 [270 kB] Get: 336 http://deb.debian.org/debian trixie/main i386 python3-referencing all 0.35.1-1 [23.5 kB] Get: 337 http://deb.debian.org/debian trixie/main i386 python3-jsonschema-specifications all 2023.12.1-2 [9020 B] Get: 338 http://deb.debian.org/debian trixie/main i386 python3-jsonschema all 4.19.2-5 [71.4 kB] Get: 339 http://deb.debian.org/debian trixie/main i386 python3-platformdirs all 4.3.6-1 [16.6 kB] Get: 340 http://deb.debian.org/debian trixie/main i386 python3-traitlets all 5.14.3+really5.14.3-1 [70.9 kB] Get: 341 http://deb.debian.org/debian trixie/main i386 python3-jupyter-core all 5.7.2-4 [35.1 kB] Get: 342 http://deb.debian.org/debian trixie/main i386 python3-nbformat all 5.9.1-1 [45.1 kB] Get: 343 http://deb.debian.org/debian trixie/main i386 python3-tenacity all 8.4.2+really8.4.1-1 [46.0 kB] Get: 344 http://deb.debian.org/debian trixie/main i386 python3-plotly all 5.20.0+dfsg-1 [2726 kB] Get: 345 http://deb.debian.org/debian trixie/main i386 python3-ruamel.yaml.clib i386 0.2.8+ds-2 [133 kB] Get: 346 http://deb.debian.org/debian trixie/main i386 python3-ruamel.yaml all 0.18.6+ds-3 [145 kB] Get: 347 http://deb.debian.org/debian trixie/main i386 python3-tabulate all 0.9.0-1 [45.9 kB] Get: 348 http://deb.debian.org/debian trixie/main i386 python3-uncertainties all 3.2.2-1 [54.7 kB] Get: 349 http://deb.debian.org/debian trixie/main i386 python3-pymatgen i386 2024.10.29+dfsg1-3 [2527 kB] Get: 350 http://deb.debian.org/debian trixie/main i386 python3-openbabel i386 3.1.1+dfsg-11+b1 [577 kB] Get: 351 http://deb.debian.org/debian trixie/main i386 python3-emmet-core all 0.76.2-1 [122 kB] Get: 352 http://deb.debian.org/debian trixie/main i386 python3-frozendict all 1.2-3 [4888 B] Get: 353 http://deb.debian.org/debian trixie/main i386 python3-h5py-serial i386 3.11.0-5 [972 kB] Get: 354 http://deb.debian.org/debian trixie/main i386 python3-h5py all 3.11.0-5 [14.7 kB] Get: 355 http://deb.debian.org/debian trixie/main i386 python3-imagesize all 1.4.1-1 [6688 B] Get: 356 http://deb.debian.org/debian trixie/main i386 python3-iniconfig all 1.1.1-2 [6396 B] Get: 357 http://deb.debian.org/debian trixie/main i386 python3-markupsafe i386 2.1.5-1+b1 [13.7 kB] Get: 358 http://deb.debian.org/debian trixie/main i386 python3-jinja2 all 3.1.3-1 [119 kB] Get: 359 http://deb.debian.org/debian trixie/main i386 python3-mpi4py i386 4.0.0-8 [665 kB] Get: 360 http://deb.debian.org/debian trixie/main i386 python3-netcdf4 i386 1.7.2-1 [594 kB] Get: 361 http://deb.debian.org/debian trixie/main i386 python3-phonopy i386 2.23.1-1+b2 [271 kB] Get: 362 http://deb.debian.org/debian trixie/main i386 python3-pluggy all 1.5.0-1 [26.9 kB] Get: 363 http://deb.debian.org/debian trixie/main i386 python3-pygments all 2.18.0+dfsg-1 [836 kB] Get: 364 http://deb.debian.org/debian trixie/main i386 python3-pytest all 8.3.3-1 [249 kB] Get: 365 http://deb.debian.org/debian trixie/main i386 python3-snowballstemmer all 2.2.0-4 [58.0 kB] Get: 366 http://deb.debian.org/debian trixie/main i386 sphinx-common all 7.4.7-4 [731 kB] Get: 367 http://deb.debian.org/debian trixie/main i386 python3-sphinx all 7.4.7-4 [588 kB] Get: 368 http://deb.debian.org/debian trixie/main i386 sphinx-rtd-theme-common all 3.0.1+dfsg-1 [1022 kB] Get: 369 http://deb.debian.org/debian trixie/main i386 python3-sphinxcontrib.jquery all 4.1-5 [7348 B] Get: 370 http://deb.debian.org/debian trixie/main i386 python3-sphinx-rtd-theme all 3.0.1+dfsg-1 [29.5 kB] Get: 371 http://deb.debian.org/debian trixie/main i386 python3-vtk9 i386 9.3.0+dfsg1-1+b3 [7225 kB] Fetched 498 MB in 10s (49.2 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package fonts-lato. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19956 files and directories currently installed.) Preparing to unpack .../fonts-lato_2.015-1_all.deb ... Unpacking fonts-lato (2.015-1) ... Selecting previously unselected package libpython3.12-minimal:i386. Preparing to unpack .../libpython3.12-minimal_3.12.7-3_i386.deb ... Unpacking libpython3.12-minimal:i386 (3.12.7-3) ... Selecting previously unselected package libexpat1:i386. Preparing to unpack .../libexpat1_2.6.3-2_i386.deb ... Unpacking libexpat1:i386 (2.6.3-2) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../python3.12-minimal_3.12.7-3_i386.deb ... Unpacking python3.12-minimal (3.12.7-3) ... Setting up libpython3.12-minimal:i386 (3.12.7-3) ... Setting up libexpat1:i386 (2.6.3-2) ... Setting up python3.12-minimal (3.12.7-3) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20302 files and directories currently installed.) Preparing to unpack .../00-python3-minimal_3.12.6-1_i386.deb ... Unpacking python3-minimal (3.12.6-1) ... Selecting previously unselected package media-types. Preparing to unpack .../01-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../02-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../03-tzdata_2024b-3_all.deb ... Unpacking tzdata (2024b-3) ... Selecting previously unselected package libkrb5support0:i386. Preparing to unpack .../04-libkrb5support0_1.21.3-3_i386.deb ... Unpacking libkrb5support0:i386 (1.21.3-3) ... Selecting previously unselected package libcom-err2:i386. Preparing to unpack .../05-libcom-err2_1.47.1-1+b1_i386.deb ... Unpacking libcom-err2:i386 (1.47.1-1+b1) ... Selecting previously unselected package libk5crypto3:i386. Preparing to unpack .../06-libk5crypto3_1.21.3-3_i386.deb ... Unpacking libk5crypto3:i386 (1.21.3-3) ... Selecting previously unselected package libkeyutils1:i386. Preparing to unpack .../07-libkeyutils1_1.6.3-4_i386.deb ... Unpacking libkeyutils1:i386 (1.6.3-4) ... Selecting previously unselected package libkrb5-3:i386. Preparing to unpack .../08-libkrb5-3_1.21.3-3_i386.deb ... Unpacking libkrb5-3:i386 (1.21.3-3) ... Selecting previously unselected package libgssapi-krb5-2:i386. Preparing to unpack .../09-libgssapi-krb5-2_1.21.3-3_i386.deb ... Unpacking libgssapi-krb5-2:i386 (1.21.3-3) ... Selecting previously unselected package libtirpc-common. Preparing to unpack .../10-libtirpc-common_1.3.4+ds-1.3_all.deb ... Unpacking libtirpc-common (1.3.4+ds-1.3) ... Selecting previously unselected package libtirpc3t64:i386. Preparing to unpack .../11-libtirpc3t64_1.3.4+ds-1.3+b1_i386.deb ... Adding 'diversion of /lib/i386-linux-gnu/libtirpc.so.3 to /lib/i386-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' Adding 'diversion of /lib/i386-linux-gnu/libtirpc.so.3.0.0 to /lib/i386-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Unpacking libtirpc3t64:i386 (1.3.4+ds-1.3+b1) ... Selecting previously unselected package libnsl2:i386. Preparing to unpack .../12-libnsl2_1.3.0-3+b3_i386.deb ... Unpacking libnsl2:i386 (1.3.0-3+b3) ... Selecting previously unselected package readline-common. Preparing to unpack .../13-readline-common_8.2-5_all.deb ... Unpacking readline-common (8.2-5) ... Selecting previously unselected package libreadline8t64:i386. Preparing to unpack .../14-libreadline8t64_8.2-5_i386.deb ... Adding 'diversion of /lib/i386-linux-gnu/libhistory.so.8 to /lib/i386-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libhistory.so.8.2 to /lib/i386-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libreadline.so.8 to /lib/i386-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libreadline.so.8.2 to /lib/i386-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:i386 (8.2-5) ... Selecting previously unselected package libpython3.12-stdlib:i386. Preparing to unpack .../15-libpython3.12-stdlib_3.12.7-3_i386.deb ... Unpacking libpython3.12-stdlib:i386 (3.12.7-3) ... Selecting previously unselected package python3.12. Preparing to unpack .../16-python3.12_3.12.7-3_i386.deb ... Unpacking python3.12 (3.12.7-3) ... Selecting previously unselected package libpython3-stdlib:i386. Preparing to unpack .../17-libpython3-stdlib_3.12.6-1_i386.deb ... Unpacking libpython3-stdlib:i386 (3.12.6-1) ... Setting up python3-minimal (3.12.6-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21364 files and directories currently installed.) Preparing to unpack .../000-python3_3.12.6-1_i386.deb ... Unpacking python3 (3.12.6-1) ... Selecting previously unselected package sgml-base. Preparing to unpack .../001-sgml-base_1.31_all.deb ... Unpacking sgml-base (1.31) ... Selecting previously unselected package libproc2-0:i386. Preparing to unpack .../002-libproc2-0_2%3a4.0.4-6_i386.deb ... Unpacking libproc2-0:i386 (2:4.0.4-6) ... Selecting previously unselected package procps. Preparing to unpack .../003-procps_2%3a4.0.4-6_i386.deb ... Unpacking procps (2:4.0.4-6) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../004-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package openssl. Preparing to unpack .../005-openssl_3.3.2-2_i386.deb ... Unpacking openssl (3.3.2-2) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../006-ca-certificates_20240203_all.deb ... Unpacking ca-certificates (20240203) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../007-libmagic-mgc_1%3a5.45-3+b1_i386.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:i386. Preparing to unpack .../008-libmagic1t64_1%3a5.45-3+b1_i386.deb ... Unpacking libmagic1t64:i386 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../009-file_1%3a5.45-3+b1_i386.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../010-gettext-base_0.22.5-2_i386.deb ... Unpacking gettext-base (0.22.5-2) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../011-libuchardet0_0.0.8-1+b2_i386.deb ... Unpacking libuchardet0:i386 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../012-groff-base_1.23.0-5_i386.deb ... Unpacking groff-base (1.23.0-5) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../013-bsdextrautils_2.40.2-9_i386.deb ... Unpacking bsdextrautils (2.40.2-9) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../014-libpipeline1_1.5.8-1_i386.deb ... Unpacking libpipeline1:i386 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../015-man-db_2.13.0-1_i386.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../016-m4_1.4.19-4_i386.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../017-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../018-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../019-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../020-autopoint_0.22.5-2_all.deb ... Unpacking autopoint (0.22.5-2) ... Selecting previously unselected package libtcl8.6:i386. Preparing to unpack .../021-libtcl8.6_8.6.15+dfsg-2_i386.deb ... Unpacking libtcl8.6:i386 (8.6.15+dfsg-2) ... Selecting previously unselected package libbrotli1:i386. Preparing to unpack .../022-libbrotli1_1.1.0-2+b5_i386.deb ... Unpacking libbrotli1:i386 (1.1.0-2+b5) ... Selecting previously unselected package libpng16-16t64:i386. Preparing to unpack .../023-libpng16-16t64_1.6.44-2_i386.deb ... Unpacking libpng16-16t64:i386 (1.6.44-2) ... Selecting previously unselected package libfreetype6:i386. Preparing to unpack .../024-libfreetype6_2.13.3+dfsg-1_i386.deb ... Unpacking libfreetype6:i386 (2.13.3+dfsg-1) ... Selecting previously unselected package fonts-dejavu-mono. Preparing to unpack .../025-fonts-dejavu-mono_2.37-8_all.deb ... Unpacking fonts-dejavu-mono (2.37-8) ... Selecting previously unselected package fonts-dejavu-core. Preparing to unpack .../026-fonts-dejavu-core_2.37-8_all.deb ... Unpacking fonts-dejavu-core (2.37-8) ... Selecting previously unselected package fontconfig-config. Preparing to unpack .../027-fontconfig-config_2.15.0-1.1+b1_i386.deb ... Unpacking fontconfig-config (2.15.0-1.1+b1) ... Selecting previously unselected package libfontconfig1:i386. Preparing to unpack .../028-libfontconfig1_2.15.0-1.1+b1_i386.deb ... Unpacking libfontconfig1:i386 (2.15.0-1.1+b1) ... Selecting previously unselected package libxau6:i386. Preparing to unpack .../029-libxau6_1%3a1.0.11-1_i386.deb ... Unpacking libxau6:i386 (1:1.0.11-1) ... Selecting previously unselected package libxdmcp6:i386. Preparing to unpack .../030-libxdmcp6_1%3a1.1.2-3+b2_i386.deb ... Unpacking libxdmcp6:i386 (1:1.1.2-3+b2) ... Selecting previously unselected package libxcb1:i386. Preparing to unpack .../031-libxcb1_1.17.0-2+b1_i386.deb ... Unpacking libxcb1:i386 (1.17.0-2+b1) ... Selecting previously unselected package libx11-data. Preparing to unpack .../032-libx11-data_2%3a1.8.10-2_all.deb ... Unpacking libx11-data (2:1.8.10-2) ... Selecting previously unselected package libx11-6:i386. Preparing to unpack .../033-libx11-6_2%3a1.8.10-2_i386.deb ... Unpacking libx11-6:i386 (2:1.8.10-2) ... Selecting previously unselected package libxrender1:i386. Preparing to unpack .../034-libxrender1_1%3a0.9.10-1.1+b2_i386.deb ... Unpacking libxrender1:i386 (1:0.9.10-1.1+b2) ... Selecting previously unselected package libxft2:i386. Preparing to unpack .../035-libxft2_2.3.6-1+b2_i386.deb ... Unpacking libxft2:i386 (2.3.6-1+b2) ... Selecting previously unselected package libxext6:i386. Preparing to unpack .../036-libxext6_2%3a1.3.4-1+b2_i386.deb ... Unpacking libxext6:i386 (2:1.3.4-1+b2) ... Selecting previously unselected package x11-common. Preparing to unpack .../037-x11-common_1%3a7.7+23.1_all.deb ... Unpacking x11-common (1:7.7+23.1) ... Selecting previously unselected package libxss1:i386. Preparing to unpack .../038-libxss1_1%3a1.2.3-1+b2_i386.deb ... Unpacking libxss1:i386 (1:1.2.3-1+b2) ... Selecting previously unselected package libtk8.6:i386. Preparing to unpack .../039-libtk8.6_8.6.15-1_i386.deb ... Unpacking libtk8.6:i386 (8.6.15-1) ... 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Setting up libarchive-zip-perl (1.68-1) ... Setting up libyaml-0-2:i386 (0.2.5-1+b2) ... Setting up libglvnd0:i386 (1.7.0-1+b2) ... Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... Setting up libtirpc-common (1.3.4+ds-1.3) ... Setting up fonts-lyx (2.4.2.1-1) ... Setting up libxcb-glx0:i386 (1.17.0-2+b1) ... Setting up libdebhelper-perl (13.20) ... Setting up libbrotli1:i386 (1.1.0-2+b5) ... Setting up libedit2:i386 (3.1-20240808-1) ... Setting up libmagic1t64:i386 (1:5.45-3+b1) ... Setting up libxcb-keysyms1:i386 (0.4.0-1+b3) ... Setting up libxcb-shape0:i386 (1.17.0-2+b1) ... Setting up x11-common (1:7.7+23.1) ... invoke-rc.d: could not determine current runlevel Setting up X socket directories... /tmp/.X11-unix /tmp/.ICE-unix. Setting up libsensors-config (1:3.6.0-10) ... Setting up libpsl5t64:i386 (0.21.2-1.1+b1) ... Setting up libnghttp2-14:i386 (1.64.0-1) ... Setting up libdeflate0:i386 (1.22-1) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up libqhull-r8.0:i386 (2020.2-6+b2) ... Setting up libxcb-render-util0:i386 (0.3.9-1+b2) ... Setting up xkb-data (2.42-1) ... Setting up libxcb-shm0:i386 (1.17.0-2+b1) ... Setting up libxcb-icccm4:i386 (0.4.2-1) ... Setting up libcom-err2:i386 (1.47.1-1+b1) ... Setting up file (1:5.45-3+b1) ... Setting up libjbig0:i386 (2.1-6.1+b2) ... Setting up libpcre2-16-0:i386 (10.42-4+b2) ... Setting up libaec0:i386 (1.1.3-1+b1) ... Setting up libopengl0:i386 (1.7.0-1+b2) ... Setting up libelf1t64:i386 (0.192-4) ... Setting up python-babel-localedata (2.14.0-1) ... Setting up libxcb-util1:i386 (0.4.0-1+b2) ... Setting up libxcb-xkb1:i386 (1.17.0-2+b1) ... Setting up libxcb-image0:i386 (0.4.0-2+b2) ... Setting up libkrb5support0:i386 (1.21.3-3) ... Setting up libmaeparser1:i386 (1.3.1-1+b2) ... Setting up libsasl2-modules-db:i386 (2.1.28+dfsg1-8) ... Setting up tzdata (2024b-3) ... Current default time zone: 'Etc/UTC' Local time is now: Wed Dec 17 02:03:30 UTC 2025. Universal Time is now: Wed Dec 17 02:03:30 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libxcb-present0:i386 (1.17.0-2+b1) ... Setting up unicode-data (15.1.0-1) ... Setting up libsymspg2:i386 (2.5.0-1) ... Setting up autotools-dev (20220109.1) ... Setting up libz3-4:i386 (4.13.3-1) ... Setting up libglib2.0-0t64:i386 (2.82.2-2) ... No schema files found: doing nothing. Setting up libblas3:i386 (3.12.0-3+b1) ... update-alternatives: using /usr/lib/i386-linux-gnu/blas/libblas.so.3 to provide /usr/lib/i386-linux-gnu/libblas.so.3 (libblas.so.3-i386-linux-gnu) in auto mode Setting up libxcb-xinerama0:i386 (1.17.0-2+b1) ... Setting up libexpat1-dev:i386 (2.6.3-2) ... Setting up libjpeg62-turbo:i386 (1:2.1.5-3+b1) ... Setting up libx11-data (2:1.8.10-2) ... Setting up libxcb-sync1:i386 (1.17.0-2+b1) ... Setting up librtmp1:i386 (2.4+20151223.gitfa8646d.1-2+b5) ... Setting up libjsoncpp26:i386 (1.9.6-2) ... Setting up libdbus-1-3:i386 (1.14.10-6) ... Setting up liblzf1:i386 (3.6-4+b2) ... Setting up libfribidi0:i386 (1.0.15-1) ... Setting up libimagequant0:i386 (2.18.0-1+b2) ... Setting up libproc2-0:i386 (2:4.0.4-6) ... Setting up fonts-dejavu-mono (2.37-8) ... Setting up libpng16-16t64:i386 (1.6.44-2) ... Setting up libhwloc15:i386 (2.11.2-1) ... Setting up libtcl8.6:i386 (8.6.15+dfsg-2) ... Setting up autopoint (0.22.5-2) ... Setting up fonts-dejavu-core (2.37-8) ... Setting up libsensors5:i386 (1:3.6.0-10+b1) ... Setting up libk5crypto3:i386 (1.21.3-3) ... Setting up libglapi-mesa:i386 (24.2.6-1) ... Setting up libsasl2-2:i386 (2.1.28+dfsg1-8) ... Setting up libgfortran5:i386 (14.2.0-8) ... Setting up libvulkan1:i386 (1.3.296.0-1) ... Setting up autoconf (2.72-3) ... Setting up libnghttp3-9:i386 (1.4.0-1+b1) ... Setting up libwebp7:i386 (1.4.0-0.1+b1) ... Setting up libxcb-dri2-0:i386 (1.17.0-2+b1) ... Setting up zlib1g-dev:i386 (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up dwz (0.15-1+b1) ... Setting up libmpich12:i386 (4.2.0-14) ... Setting up libmtdev1t64:i386 (1.1.6-1.2+b1) ... Setting up sensible-utils (0.0.24) ... Setting up ocl-icd-libopencl1:i386 (2.3.2-1+b2) ... Setting up libxshmfence1:i386 (1.3-1+b2) ... Setting up libtiff6:i386 (4.5.1+git230720-5) ... Setting up libxcb-randr0:i386 (1.17.0-2+b1) ... Setting up libuchardet0:i386 (0.0.8-1+b2) ... Setting up procps (2:4.0.4-6) ... Setting up libjson-perl (4.10000-1) ... Setting up libnl-3-200:i386 (3.7.0-0.3+b1) ... Setting up libmd4c0:i386 (0.5.2-2+b1) ... Setting up libopenjp2-7:i386 (2.5.0-2+b4) ... Setting up libx11-6:i386 (2:1.8.10-2) ... Setting up libslurm41t64 (24.05.4-1) ... Setting up netbase (6.4) ... Setting up libngtcp2-16:i386 (1.6.0-1) ... Setting up sgml-base (1.31) ... Setting up libkrb5-3:i386 (1.21.3-3) ... Setting up libevent-core-2.1-7t64:i386 (2.1.12-stable-10+b1) ... Setting up libpsm-infinipath1 (3.3+20.604758e7-6.3) ... update-alternatives: using /usr/lib/libpsm1/libpsm_infinipath.so.1.16 to provide /usr/lib/i386-linux-gnu/libpsm_infinipath.so.1 (libpsm_infinipath.so.1) in auto mode Setting up libssh2-1t64:i386 (1.11.1-1) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up python-matplotlib-data (3.8.3-3) ... Setting up openssl (3.3.2-2) ... Setting up libwebpmux3:i386 (1.4.0-0.1+b1) ... Setting up libinchi1.07 (1.07.1+dfsg-4) ... Setting up libdrm-common (2.4.123-1) ... Setting up libevdev2:i386 (1.13.3+dfsg-1) ... Setting up readline-common (8.2-5) ... Setting up libxml2:i386 (2.12.7+dfsg+really2.9.14-0.1) ... Setting up pymatgen-test-files (2024.10.29-1) ... Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... Setting up sphinx-rtd-theme-common (3.0.1+dfsg-1) ... Setting up libgudev-1.0-0:i386 (238-5+b1) ... Setting up libngtcp2-crypto-gnutls8:i386 (1.6.0-1) ... Setting up libsz2:i386 (1.1.3-1+b1) ... Setting up libjs-bootstrap (3.4.1+dfsg-3) ... Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Setting up libwacom-common (2.13.0-1) ... Setting up libxkbcommon0:i386 (1.6.0-1+b2) ... Setting up libwayland-client0:i386 (1.23.0-1+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up libxcb-dri3-0:i386 (1.17.0-2+b1) ... Setting up libllvm19:i386 (1:19.1.3-1) ... Setting up libx11-xcb1:i386 (2:1.8.10-2) ... Setting up libice6:i386 (2:1.1.1-1) ... Setting up liblapack3:i386 (3.12.0-3+b1) ... update-alternatives: using /usr/lib/i386-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/i386-linux-gnu/liblapack.so.3 (liblapack.so.3-i386-linux-gnu) in auto mode Setting up gettext (0.22.5-2) ... Setting up libxrender1:i386 (1:0.9.10-1.1+b2) ... Setting up libtool (2.4.7-8) ... Setting up libwacom9:i386 (2.13.0-1) ... Setting up libevent-pthreads-2.1-7t64:i386 (2.1.12-stable-10+b1) ... Setting up fontconfig-config (2.15.0-1.1+b1) ... Setting up libwebpdemux2:i386 (1.4.0-0.1+b1) ... Setting up hwloc-nox (2.11.2-1) ... Setting up libxext6:i386 (2:1.3.4-1+b2) ... Setting up libldap-2.5-0:i386 (2.5.18+dfsg-3+b1) ... Setting up libxxf86vm1:i386 (1:1.1.4-1+b3) ... Setting up libinput-bin (1.26.2-1) ... Setting up libtbbbind-2-5:i386 (2021.12.0-1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libnl-route-3-200:i386 (3.7.0-0.3+b1) ... Setting up libxnvctrl0:i386 (535.171.04-1+b1) ... Setting up dh-autoreconf (20) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... Setting up packmol (1:20.14.3-1) ... Setting up libfreetype6:i386 (2.13.3+dfsg-1) ... Setting up libxfixes3:i386 (1:6.0.0-2+b2) ... Setting up shared-mime-info (2.4-5+b1) ... Setting up libxkbcommon-x11-0:i386 (1.6.0-1+b2) ... Setting up libgssapi-krb5-2:i386 (1.21.3-3) ... Setting up libjs-sphinxdoc (7.4.7-4) ... Setting up libreadline8t64:i386 (8.2-5) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up libdrm2:i386 (2.4.123-1) ... Setting up groff-base (1.23.0-5) ... Setting up xml-core (0.19) ... Setting up libxslt1.1:i386 (1.1.35-1.1+b1) ... Setting up libharfbuzz0b:i386 (10.0.1-1) ... Setting up libxss1:i386 (1:1.2.3-1+b2) ... Setting up libfontconfig1:i386 (2.15.0-1.1+b1) ... Setting up libsm6:i386 (2:1.2.4-1) ... Setting up liblbfgsb0:i386 (3.0+dfsg.4-1+b2) ... Setting up libdrm-amdgpu1:i386 (2.4.123-1) ... Setting up libinput10:i386 (1.26.2-1) ... Setting up libibverbs1:i386 (52.0-2+b1) ... Setting up fontconfig (2.15.0-1.1+b1) ... Regenerating fonts cache... done. Setting up libxft2:i386 (2.3.6-1+b2) ... Setting up libcurl4t64:i386 (8.11.0-1) ... Setting up libtirpc3t64:i386 (1.3.4+ds-1.3+b1) ... Setting up libdrm-radeon1:i386 (2.4.123-1) ... Setting up mpich (4.2.0-14) ... update-alternatives: using /usr/bin/mpicc.mpich to provide /usr/bin/mpicc (mpi) in auto mode update-alternatives: using /usr/bin/mpirun.mpich to provide /usr/bin/mpirun (mpirun) in auto mode Setting up po-debconf (1.0.21+nmu1) ... Setting up libtk8.6:i386 (8.6.15-1) ... Setting up libdrm-intel1:i386 (2.4.123-1) ... Setting up python3.12-tk (3.12.7-3) ... Setting up mpi-default-bin (1.17) ... Setting up libcurl3t64-gnutls:i386 (8.11.0-1) ... Setting up libtbb12:i386 (2021.12.0-1) ... Setting up libhwloc-plugins:i386 (2.11.2-1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libcairo2:i386 (1.18.2-2) ... Setting up python3.13-tk (3.13.0-1) ... Setting up libqt5core5t64:i386 (5.15.15+dfsg-2) ... Setting up libraqm0:i386 (0.10.1-1+b2) ... Setting up sphinx-common (7.4.7-4) ... Setting up libtheora0:i386 (1.1.1+dfsg.1-17) ... Setting up libnsl2:i386 (1.3.0-3+b3) ... Setting up librdmacm1t64:i386 (52.0-2+b1) ... Setting up libhdf5-103-1t64:i386 (1.10.10+repack-4) ... Setting up libfabric1:i386 (1.17.0-3.1) ... Setting up libhdf5-hl-100t64:i386 (1.10.10+repack-4) ... Setting up mesa-libgallium:i386 (24.2.6-1) ... Setting up tk8.6-blt2.5 (2.5.3+dfsg-7) ... Setting up libnetcdf19t64:i386 (1:4.9.2-7) ... Setting up libqt5dbus5t64:i386 (5.15.15+dfsg-2) ... Setting up libpython3.12-stdlib:i386 (3.12.7-3) ... Setting up libproj25:i386 (9.5.0-1) ... Setting up libgbm1:i386 (24.2.6-1) ... Setting up blt (2.5.3+dfsg-7) ... Setting up python3.12 (3.12.7-3) ... Setting up libgl1-mesa-dri:i386 (24.2.6-1) ... Setting up libqt5network5t64:i386 (5.15.15+dfsg-2) ... Setting up libopenbabel7 (3.1.1+dfsg-11+b1) ... Setting up debhelper (13.20) ... Setting up libpython3.12t64:i386 (3.12.7-3) ... Setting up libegl-mesa0:i386 (24.2.6-1) ... Setting up libopenmpi3t64:i386 (4.1.6-13.3) ... Setting up libegl1:i386 (1.7.0-1+b2) ... Setting up libpython3-stdlib:i386 (3.12.6-1) ... Setting up libglx-mesa0:i386 (24.2.6-1) ... Setting up libglx0:i386 (1.7.0-1+b2) ... Setting up python3 (3.12.6-1) ... Setting up libpython3.12-dev:i386 (3.12.7-3) ... Setting up python3-zipp (3.21.0-1) ... Setting up python3-mpi4py (4.0.0-8) ... Setting up python3-autocommand (2.2.2-3) ... Setting up python3-markupsafe (2.1.5-1+b1) ... Setting up python3-wheel (0.44.0-2) ... Setting up python3-annotated-types (0.7.0-1) ... Setting up python3-platformdirs (4.3.6-1) ... Setting up python3-tz (2024.1-2) ... Setting up python3-six (1.16.0-7) ... Setting up python3-bson (4.10.1-2) ... Setting up python3-pil:i386 (10.4.0-1) ... Setting up python3-roman (4.2-1) ... Setting up python3-decorator (5.1.1-5) ... Setting up python3-jinja2 (3.1.3-1) ... Setting up python3-packaging (24.1-1) ... Setting up libgl1:i386 (1.7.0-1+b2) ... Setting up python3-pyproject-hooks (1.2.0-1) ... Setting up python3-pyparsing (3.1.2-1) ... Setting up python3-certifi (2024.8.30+dfsg-1) ... Setting up python3-snowballstemmer (2.2.0-4) ... Setting up python3-brotli (1.1.0-2+b5) ... Setting up python3-cycler (0.12.1-1) ... Setting up python3-kiwisolver (1.4.7-2) ... Setting up python3-idna (3.8-2) ... Setting up python3.12-dev (3.12.7-3) ... Setting up cython3 (3.0.11+dfsg-1) ... Setting up python3-typing-extensions (4.12.2-2) ... Setting up libglew2.2:i386 (2.2.0-4+b2) ... Setting up python3-toml (0.10.2-1) ... Setting up python3-installer (0.7.0+dfsg1-3) ... Setting up python3-urllib3 (2.0.7-2) ... Setting up python3-pluggy (1.5.0-1) ... Setting up python3-rpds-py (0.20.1-1) ... Setting up python3-fastjsonschema (2.20.0-1) ... Setting up python3-lxml:i386 (5.3.0-1) ... Setting up python3-dnspython (2.6.1-1) ... Setting up python3-traitlets (5.14.3+really5.14.3-1) ... Setting up python3-dateutil (2.9.0-3) ... Setting up python3-email-validator (2.2.0-1) ... Setting up python3-mpmath (1.3.0-1) ... Setting up python3-build (1.2.2-1) ... Setting up python3-appdirs (1.4.4-4) ... Setting up python3-soupsieve (2.6-1) ... Setting up python3-jupyter-core (5.7.2-4) ... Setting up python3-imagesize (1.4.1-1) ... Setting up python3-dotenv (1.0.1-1) ... Setting up python3-more-itertools (10.5.0-1) ... Setting up python3-iniconfig (1.1.1-2) ... Setting up python3-sympy (1.13.3-1) ... Setting up python3-attr (23.2.0-2) ... Setting up libpython3-dev:i386 (3.12.6-1) ... Setting up python3-pydantic-core (2.23.4-2+b1) ... Setting up python3-jaraco.functools (4.1.0-1) ... Setting up python3-openbabel (3.1.1+dfsg-11+b1) ... Setting up python3-jaraco.context (6.0.0-1) ... Setting up python3-lz4 (4.0.2+dfsg-1+b4) ... Setting up python3-defusedxml (0.7.1-2) ... Setting up python3-charset-normalizer (3.4.0-1) ... Setting up python3-pytest (8.3.3-1) ... Setting up python3-alabaster (0.7.16-0.1) ... Setting up python3-tenacity (8.4.2+really8.4.1-1) ... Setting up python3-tqdm (4.66.5-1) ... Setting up python3-typeguard (4.4.1-1) ... Setting up python3-ruamel.yaml.clib:i386 (0.2.8+ds-2) ... Setting up python3-frozendict (1.2-3) ... Setting up python3-tabulate (0.9.0-1) ... Setting up python3-latexcodec (3.0.0-1) ... Setting up python3-all (3.12.6-1) ... Setting up python3-yaml (6.0.2-1) ... Setting up python3-tk:i386 (3.12.6-1) ... Setting up python3-bs4 (4.12.3-3) ... Setting up libgl2ps1.4 (1.4.2+dfsg1-2) ... Setting up python3-inflect (7.3.1-2) ... Setting up libqt5gui5t64:i386 (5.15.15+dfsg-2) ... Setting up python3-pil.imagetk:i386 (10.4.0-1) ... Setting up libpython3-all-dev:i386 (3.12.6-1) ... Setting up python3-pydantic (2.9.2-2) ... Setting up python3-dev (3.12.6-1) ... Setting up libvtk9.3:i386 (9.3.0+dfsg1-1+b3) ... Setting up python3-ruamel.yaml (0.18.6+ds-3) ... Setting up python3-pydantic-settings (2.6.1-1) ... Setting up python3-referencing (0.35.1-1) ... Setting up python3-pkg-resources (74.1.2-2) ... Setting up python3-all-dev (3.12.6-1) ... Setting up python3-setuptools (74.1.2-2) ... Setting up python3-joblib (1.3.2-5) ... Setting up python3-babel (2.14.0-1) ... update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode Setting up libqt5widgets5t64:i386 (5.15.15+dfsg-2) ... Setting up python3-networkx (3.2.1-4) ... Setting up python3-fs (2.4.16-4) ... Setting up python3-palettable (3.3.3-1) ... Setting up python3-pygments (2.18.0+dfsg-1) ... Setting up python3-chardet (5.2.0+dfsg-1) ... Setting up python3-requests (2.32.3+dfsg-1) ... Setting up python3-numpy (1:1.26.4+ds-11) ... Setting up python3-pybtex (0.24.0-4) ... Setting up python3-contourpy (1.3.0-2) ... Setting up python3-spglib (2.5.0-1) ... Setting up python3-jsonschema-specifications (2023.12.1-2) ... Setting up python3-uncertainties (3.2.2-1) ... Setting up dh-python (6.20241024) ... Setting up python3-scipy (1.13.1-5) ... Setting up libvtk9.3-qt:i386 (9.3.0+dfsg1-1+b3) ... Setting up pybuild-plugin-pyproject (6.20241024) ... Setting up python3-pandas-lib:i386 (2.2.3+dfsg-5) ... Setting up python3-h5py-serial (3.11.0-5) ... Setting up python3-pandas (2.2.3+dfsg-5) ... Setting up python3-jsonschema (4.19.2-5) ... Setting up python3-h5py (3.11.0-5) ... Setting up python3-cftime (1.6.4-1+b1) ... Setting up python3-monty (2024.7.29-1) ... Setting up python3-netcdf4 (1.7.2-1) ... Setting up python3-vtk9 (9.3.0+dfsg1-1+b3) ... /usr/lib/python3/dist-packages/vtkmodules/util/vtkMethodParser.py:304: SyntaxWarning: invalid escape sequence '\S' patn = re.compile (" \S") Setting up python3-nbformat (5.9.1-1) ... Setting up python3-plotly (5.20.0+dfsg-1) ... Setting up python3-fonttools (4.54.1-4) ... Setting up python3-ufolib2 (0.16.0+dfsg1-1) ... Setting up python3-matplotlib (3.8.3-3) ... Setting up python3-ase (3.23.0-1) ... Setting up python3-phonopy (2.23.1-1+b2) ... Setting up python3-pymatgen (2024.10.29+dfsg1-3) ... Setting up python3-emmet-core (0.76.2-1) ... Processing triggers for libc-bin (2.40-3) ... Processing triggers for sgml-base (1.31) ... Setting up docutils-common (0.21.2+dfsg-2) ... Processing triggers for sgml-base (1.31) ... Setting up python3-docutils (0.21.2+dfsg-2) ... Setting up python3-sphinx (7.4.7-4) ... Setting up python3-sphinxcontrib.jquery (4.1-5) ... Setting up python3-sphinx-rtd-theme (3.0.1+dfsg-1) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/pymatgen-2024.10.29+dfsg1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../pymatgen_2024.10.29+dfsg1-3_source.changes dpkg-buildpackage: info: source package pymatgen dpkg-buildpackage: info: source version 2024.10.29+dfsg1-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Drew Parsons dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 dpkg-source: info: using options from pymatgen-2024.10.29+dfsg1/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/ debian/rules clean dh clean --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild debian/rules execute_after_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/pymatgen-2024.10.29+dfsg1' rm -f pymatgen/optimization/linear_assignment.c pymatgen/optimization/neighbors.c pymatgen/util/coord_cython.c rm -rf pd.json .hypothesis tmp_dir make[1]: Leaving directory '/build/reproducible-path/pymatgen-2024.10.29+dfsg1' dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary dh binary --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild dh_auto_build -O--buildsystem=pybuild I: pybuild plugin_pyproject:129: Building wheel for python3.12 with "build" module I: pybuild base:311: python3.12 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen * Building wheel... running bdist_wheel running build running build_py creating build creating build/lib.linux-i686-cpython-312 creating build/lib.linux-i686-cpython-312/pymatgen copying src/pymatgen/dao.py -> build/lib.linux-i686-cpython-312/pymatgen creating build/lib.linux-i686-cpython-312/pymatgen/core copying src/pymatgen/core/surface.py -> build/lib.linux-i686-cpython-312/pymatgen/core copying src/pymatgen/core/tensors.py -> build/lib.linux-i686-cpython-312/pymatgen/core copying src/pymatgen/core/libxcfunc.py -> build/lib.linux-i686-cpython-312/pymatgen/core copying src/pymatgen/core/bonds.py -> build/lib.linux-i686-cpython-312/pymatgen/core copying src/pymatgen/core/periodic_table.py -> build/lib.linux-i686-cpython-312/pymatgen/core copying src/pymatgen/core/trajectory.py -> build/lib.linux-i686-cpython-312/pymatgen/core copying src/pymatgen/core/xcfunc.py -> build/lib.linux-i686-cpython-312/pymatgen/core copying src/pymatgen/core/units.py -> build/lib.linux-i686-cpython-312/pymatgen/core copying src/pymatgen/core/spectrum.py -> build/lib.linux-i686-cpython-312/pymatgen/core copying src/pymatgen/core/composition.py -> build/lib.linux-i686-cpython-312/pymatgen/core copying src/pymatgen/core/interface.py -> build/lib.linux-i686-cpython-312/pymatgen/core copying src/pymatgen/core/__init__.py -> build/lib.linux-i686-cpython-312/pymatgen/core copying src/pymatgen/core/molecular_orbitals.py -> build/lib.linux-i686-cpython-312/pymatgen/core copying src/pymatgen/core/lattice.py -> build/lib.linux-i686-cpython-312/pymatgen/core copying src/pymatgen/core/ion.py -> build/lib.linux-i686-cpython-312/pymatgen/core copying src/pymatgen/core/operations.py -> build/lib.linux-i686-cpython-312/pymatgen/core copying src/pymatgen/core/structure.py -> build/lib.linux-i686-cpython-312/pymatgen/core copying src/pymatgen/core/sites.py -> build/lib.linux-i686-cpython-312/pymatgen/core creating build/lib.linux-i686-cpython-312/pymatgen/alchemy copying src/pymatgen/alchemy/transmuters.py -> build/lib.linux-i686-cpython-312/pymatgen/alchemy copying src/pymatgen/alchemy/materials.py -> build/lib.linux-i686-cpython-312/pymatgen/alchemy copying src/pymatgen/alchemy/__init__.py -> build/lib.linux-i686-cpython-312/pymatgen/alchemy copying src/pymatgen/alchemy/filters.py -> build/lib.linux-i686-cpython-312/pymatgen/alchemy creating build/lib.linux-i686-cpython-312/pymatgen/apps copying src/pymatgen/apps/__init__.py -> build/lib.linux-i686-cpython-312/pymatgen/apps creating build/lib.linux-i686-cpython-312/pymatgen/command_line copying src/pymatgen/command_line/bader_caller.py -> build/lib.linux-i686-cpython-312/pymatgen/command_line copying src/pymatgen/command_line/mcsqs_caller.py -> build/lib.linux-i686-cpython-312/pymatgen/command_line copying src/pymatgen/command_line/enumlib_caller.py -> build/lib.linux-i686-cpython-312/pymatgen/command_line copying src/pymatgen/command_line/vampire_caller.py -> build/lib.linux-i686-cpython-312/pymatgen/command_line copying src/pymatgen/command_line/gulp_caller.py -> build/lib.linux-i686-cpython-312/pymatgen/command_line copying src/pymatgen/command_line/critic2_caller.py -> build/lib.linux-i686-cpython-312/pymatgen/command_line copying src/pymatgen/command_line/__init__.py -> build/lib.linux-i686-cpython-312/pymatgen/command_line copying src/pymatgen/command_line/chargemol_caller.py -> build/lib.linux-i686-cpython-312/pymatgen/command_line creating build/lib.linux-i686-cpython-312/pymatgen/analysis copying src/pymatgen/analysis/reaction_calculator.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis copying src/pymatgen/analysis/excitation.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis copying src/pymatgen/analysis/hhi.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis copying src/pymatgen/analysis/dimensionality.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis copying src/pymatgen/analysis/structure_analyzer.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis copying src/pymatgen/analysis/functional_groups.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis copying src/pymatgen/analysis/fragmenter.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis copying src/pymatgen/analysis/phase_diagram.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis copying src/pymatgen/analysis/local_env.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis copying src/pymatgen/analysis/piezo.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis copying src/pymatgen/analysis/disorder.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis copying src/pymatgen/analysis/surface_analysis.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis copying src/pymatgen/analysis/molecule_structure_comparator.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis copying src/pymatgen/analysis/chempot_diagram.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis copying src/pymatgen/analysis/prototypes.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis copying src/pymatgen/analysis/cost.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis copying src/pymatgen/analysis/structure_matcher.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis copying src/pymatgen/analysis/eos.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis copying src/pymatgen/analysis/graphs.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis copying src/pymatgen/analysis/xps.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis copying src/pymatgen/analysis/wulff.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis copying src/pymatgen/analysis/bond_valence.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis copying src/pymatgen/analysis/interface_reactions.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis copying src/pymatgen/analysis/bond_dissociation.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis copying src/pymatgen/analysis/quasirrho.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis copying src/pymatgen/analysis/quasiharmonic.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis copying src/pymatgen/analysis/molecule_matcher.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis copying src/pymatgen/analysis/transition_state.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis copying src/pymatgen/analysis/energy_models.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis copying src/pymatgen/analysis/piezo_sensitivity.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis copying src/pymatgen/analysis/pourbaix_diagram.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis copying src/pymatgen/analysis/nmr.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis copying src/pymatgen/analysis/thermochemistry.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis copying src/pymatgen/analysis/adsorption.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis copying src/pymatgen/analysis/ewald.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis creating build/lib.linux-i686-cpython-312/pymatgen/cli copying src/pymatgen/cli/feff_plot_dos.py -> build/lib.linux-i686-cpython-312/pymatgen/cli copying src/pymatgen/cli/pmg_structure.py -> build/lib.linux-i686-cpython-312/pymatgen/cli copying src/pymatgen/cli/get_environment.py -> build/lib.linux-i686-cpython-312/pymatgen/cli copying src/pymatgen/cli/pmg.py -> build/lib.linux-i686-cpython-312/pymatgen/cli copying src/pymatgen/cli/pmg_plot.py -> build/lib.linux-i686-cpython-312/pymatgen/cli copying src/pymatgen/cli/feff_plot_cross_section.py -> build/lib.linux-i686-cpython-312/pymatgen/cli copying src/pymatgen/cli/pmg_potcar.py -> build/lib.linux-i686-cpython-312/pymatgen/cli copying src/pymatgen/cli/__init__.py -> build/lib.linux-i686-cpython-312/pymatgen/cli copying src/pymatgen/cli/pmg_config.py -> build/lib.linux-i686-cpython-312/pymatgen/cli copying src/pymatgen/cli/pmg_analyze.py -> build/lib.linux-i686-cpython-312/pymatgen/cli creating build/lib.linux-i686-cpython-312/pymatgen/entries copying src/pymatgen/entries/exp_entries.py -> build/lib.linux-i686-cpython-312/pymatgen/entries copying src/pymatgen/entries/computed_entries.py -> build/lib.linux-i686-cpython-312/pymatgen/entries copying src/pymatgen/entries/compatibility.py -> build/lib.linux-i686-cpython-312/pymatgen/entries copying src/pymatgen/entries/correction_calculator.py -> build/lib.linux-i686-cpython-312/pymatgen/entries copying src/pymatgen/entries/mixing_scheme.py -> build/lib.linux-i686-cpython-312/pymatgen/entries copying src/pymatgen/entries/entry_tools.py -> build/lib.linux-i686-cpython-312/pymatgen/entries copying src/pymatgen/entries/__init__.py -> build/lib.linux-i686-cpython-312/pymatgen/entries creating build/lib.linux-i686-cpython-312/pymatgen/transformations copying src/pymatgen/transformations/site_transformations.py -> build/lib.linux-i686-cpython-312/pymatgen/transformations copying src/pymatgen/transformations/transformation_abc.py -> build/lib.linux-i686-cpython-312/pymatgen/transformations copying src/pymatgen/transformations/standard_transformations.py -> build/lib.linux-i686-cpython-312/pymatgen/transformations copying src/pymatgen/transformations/advanced_transformations.py -> build/lib.linux-i686-cpython-312/pymatgen/transformations copying src/pymatgen/transformations/__init__.py -> build/lib.linux-i686-cpython-312/pymatgen/transformations creating build/lib.linux-i686-cpython-312/pymatgen/phonon copying src/pymatgen/phonon/bandstructure.py -> build/lib.linux-i686-cpython-312/pymatgen/phonon copying src/pymatgen/phonon/plotter.py -> build/lib.linux-i686-cpython-312/pymatgen/phonon copying src/pymatgen/phonon/gruneisen.py -> build/lib.linux-i686-cpython-312/pymatgen/phonon copying src/pymatgen/phonon/thermal_displacements.py -> build/lib.linux-i686-cpython-312/pymatgen/phonon copying src/pymatgen/phonon/ir_spectra.py -> build/lib.linux-i686-cpython-312/pymatgen/phonon copying src/pymatgen/phonon/__init__.py -> build/lib.linux-i686-cpython-312/pymatgen/phonon copying src/pymatgen/phonon/dos.py -> build/lib.linux-i686-cpython-312/pymatgen/phonon creating build/lib.linux-i686-cpython-312/pymatgen/vis copying src/pymatgen/vis/structure_chemview.py -> build/lib.linux-i686-cpython-312/pymatgen/vis copying src/pymatgen/vis/plotters.py -> build/lib.linux-i686-cpython-312/pymatgen/vis copying src/pymatgen/vis/__init__.py -> build/lib.linux-i686-cpython-312/pymatgen/vis copying src/pymatgen/vis/structure_vtk.py -> build/lib.linux-i686-cpython-312/pymatgen/vis creating build/lib.linux-i686-cpython-312/pymatgen/optimization copying src/pymatgen/optimization/__init__.py -> build/lib.linux-i686-cpython-312/pymatgen/optimization creating build/lib.linux-i686-cpython-312/pymatgen/electronic_structure copying src/pymatgen/electronic_structure/cohp.py -> build/lib.linux-i686-cpython-312/pymatgen/electronic_structure copying src/pymatgen/electronic_structure/bandstructure.py -> build/lib.linux-i686-cpython-312/pymatgen/electronic_structure copying src/pymatgen/electronic_structure/boltztrap.py -> build/lib.linux-i686-cpython-312/pymatgen/electronic_structure copying src/pymatgen/electronic_structure/plotter.py -> build/lib.linux-i686-cpython-312/pymatgen/electronic_structure copying src/pymatgen/electronic_structure/core.py -> build/lib.linux-i686-cpython-312/pymatgen/electronic_structure copying src/pymatgen/electronic_structure/__init__.py -> build/lib.linux-i686-cpython-312/pymatgen/electronic_structure copying src/pymatgen/electronic_structure/boltztrap2.py -> build/lib.linux-i686-cpython-312/pymatgen/electronic_structure copying src/pymatgen/electronic_structure/dos.py -> build/lib.linux-i686-cpython-312/pymatgen/electronic_structure creating build/lib.linux-i686-cpython-312/pymatgen/util copying src/pymatgen/util/plotting.py -> build/lib.linux-i686-cpython-312/pymatgen/util copying src/pymatgen/util/string.py -> build/lib.linux-i686-cpython-312/pymatgen/util copying src/pymatgen/util/graph_hashing.py -> build/lib.linux-i686-cpython-312/pymatgen/util copying src/pymatgen/util/joblib.py -> build/lib.linux-i686-cpython-312/pymatgen/util copying src/pymatgen/util/provenance.py -> build/lib.linux-i686-cpython-312/pymatgen/util copying src/pymatgen/util/numba.py -> build/lib.linux-i686-cpython-312/pymatgen/util copying src/pymatgen/util/io_utils.py -> build/lib.linux-i686-cpython-312/pymatgen/util copying src/pymatgen/util/coord.py -> build/lib.linux-i686-cpython-312/pymatgen/util copying src/pymatgen/util/due.py -> build/lib.linux-i686-cpython-312/pymatgen/util copying src/pymatgen/util/__init__.py -> build/lib.linux-i686-cpython-312/pymatgen/util copying src/pymatgen/util/typing.py -> build/lib.linux-i686-cpython-312/pymatgen/util copying src/pymatgen/util/misc.py -> build/lib.linux-i686-cpython-312/pymatgen/util copying src/pymatgen/util/num.py -> build/lib.linux-i686-cpython-312/pymatgen/util creating build/lib.linux-i686-cpython-312/pymatgen/symmetry copying src/pymatgen/symmetry/bandstructure.py -> build/lib.linux-i686-cpython-312/pymatgen/symmetry copying src/pymatgen/symmetry/kpath.py -> build/lib.linux-i686-cpython-312/pymatgen/symmetry copying src/pymatgen/symmetry/site_symmetries.py -> build/lib.linux-i686-cpython-312/pymatgen/symmetry copying src/pymatgen/symmetry/settings.py -> build/lib.linux-i686-cpython-312/pymatgen/symmetry copying src/pymatgen/symmetry/analyzer.py -> build/lib.linux-i686-cpython-312/pymatgen/symmetry copying src/pymatgen/symmetry/__init__.py -> build/lib.linux-i686-cpython-312/pymatgen/symmetry copying src/pymatgen/symmetry/groups.py -> build/lib.linux-i686-cpython-312/pymatgen/symmetry copying src/pymatgen/symmetry/maggroups.py -> build/lib.linux-i686-cpython-312/pymatgen/symmetry copying src/pymatgen/symmetry/structure.py -> build/lib.linux-i686-cpython-312/pymatgen/symmetry creating build/lib.linux-i686-cpython-312/pymatgen/ext copying src/pymatgen/ext/matproj.py -> build/lib.linux-i686-cpython-312/pymatgen/ext copying src/pymatgen/ext/matproj_legacy.py -> build/lib.linux-i686-cpython-312/pymatgen/ext copying src/pymatgen/ext/cod.py -> build/lib.linux-i686-cpython-312/pymatgen/ext copying src/pymatgen/ext/optimade.py -> build/lib.linux-i686-cpython-312/pymatgen/ext creating build/lib.linux-i686-cpython-312/pymatgen/io copying src/pymatgen/io/jarvis.py -> build/lib.linux-i686-cpython-312/pymatgen/io copying src/pymatgen/io/shengbte.py -> build/lib.linux-i686-cpython-312/pymatgen/io copying src/pymatgen/io/zeopp.py -> build/lib.linux-i686-cpython-312/pymatgen/io copying src/pymatgen/io/xcrysden.py -> build/lib.linux-i686-cpython-312/pymatgen/io copying src/pymatgen/io/lmto.py -> build/lib.linux-i686-cpython-312/pymatgen/io copying src/pymatgen/io/res.py -> build/lib.linux-i686-cpython-312/pymatgen/io copying src/pymatgen/io/cssr.py -> build/lib.linux-i686-cpython-312/pymatgen/io copying src/pymatgen/io/core.py -> build/lib.linux-i686-cpython-312/pymatgen/io copying src/pymatgen/io/prismatic.py -> build/lib.linux-i686-cpython-312/pymatgen/io copying src/pymatgen/io/template.py -> build/lib.linux-i686-cpython-312/pymatgen/io copying src/pymatgen/io/phonopy.py -> build/lib.linux-i686-cpython-312/pymatgen/io copying src/pymatgen/io/nwchem.py -> build/lib.linux-i686-cpython-312/pymatgen/io copying src/pymatgen/io/babel.py -> build/lib.linux-i686-cpython-312/pymatgen/io copying src/pymatgen/io/xyz.py -> build/lib.linux-i686-cpython-312/pymatgen/io copying src/pymatgen/io/xr.py -> build/lib.linux-i686-cpython-312/pymatgen/io copying src/pymatgen/io/atat.py -> build/lib.linux-i686-cpython-312/pymatgen/io copying src/pymatgen/io/pwscf.py -> build/lib.linux-i686-cpython-312/pymatgen/io copying src/pymatgen/io/fiesta.py -> build/lib.linux-i686-cpython-312/pymatgen/io copying src/pymatgen/io/wannier90.py -> build/lib.linux-i686-cpython-312/pymatgen/io copying src/pymatgen/io/packmol.py -> build/lib.linux-i686-cpython-312/pymatgen/io copying src/pymatgen/io/gaussian.py -> build/lib.linux-i686-cpython-312/pymatgen/io copying src/pymatgen/io/cif.py -> build/lib.linux-i686-cpython-312/pymatgen/io copying src/pymatgen/io/openff.py -> build/lib.linux-i686-cpython-312/pymatgen/io copying src/pymatgen/io/ase.py -> build/lib.linux-i686-cpython-312/pymatgen/io copying src/pymatgen/io/optimade.py -> build/lib.linux-i686-cpython-312/pymatgen/io copying src/pymatgen/io/multiwfn.py -> build/lib.linux-i686-cpython-312/pymatgen/io copying src/pymatgen/io/common.py -> build/lib.linux-i686-cpython-312/pymatgen/io copying src/pymatgen/io/adf.py -> build/lib.linux-i686-cpython-312/pymatgen/io copying src/pymatgen/io/icet.py -> build/lib.linux-i686-cpython-312/pymatgen/io creating build/lib.linux-i686-cpython-312/pymatgen/apps/battery copying src/pymatgen/apps/battery/plotter.py -> build/lib.linux-i686-cpython-312/pymatgen/apps/battery copying src/pymatgen/apps/battery/conversion_battery.py -> build/lib.linux-i686-cpython-312/pymatgen/apps/battery copying src/pymatgen/apps/battery/battery_abc.py -> build/lib.linux-i686-cpython-312/pymatgen/apps/battery copying src/pymatgen/apps/battery/analyzer.py -> build/lib.linux-i686-cpython-312/pymatgen/apps/battery copying src/pymatgen/apps/battery/__init__.py -> build/lib.linux-i686-cpython-312/pymatgen/apps/battery copying src/pymatgen/apps/battery/insertion_battery.py -> build/lib.linux-i686-cpython-312/pymatgen/apps/battery creating build/lib.linux-i686-cpython-312/pymatgen/apps/borg copying src/pymatgen/apps/borg/hive.py -> build/lib.linux-i686-cpython-312/pymatgen/apps/borg copying src/pymatgen/apps/borg/queen.py -> build/lib.linux-i686-cpython-312/pymatgen/apps/borg copying src/pymatgen/apps/borg/__init__.py -> build/lib.linux-i686-cpython-312/pymatgen/apps/borg creating build/lib.linux-i686-cpython-312/pymatgen/analysis/ferroelectricity copying src/pymatgen/analysis/ferroelectricity/polarization.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/ferroelectricity copying src/pymatgen/analysis/ferroelectricity/__init__.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/ferroelectricity creating build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv copying src/pymatgen/analysis/chemenv/__init__.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv creating build/lib.linux-i686-cpython-312/pymatgen/analysis/diffraction copying src/pymatgen/analysis/diffraction/core.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/diffraction copying src/pymatgen/analysis/diffraction/neutron.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/diffraction copying src/pymatgen/analysis/diffraction/tem.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/diffraction copying src/pymatgen/analysis/diffraction/xrd.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/diffraction copying src/pymatgen/analysis/diffraction/__init__.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/diffraction creating build/lib.linux-i686-cpython-312/pymatgen/analysis/gb copying src/pymatgen/analysis/gb/__init__.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/gb copying src/pymatgen/analysis/gb/grain.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/gb creating build/lib.linux-i686-cpython-312/pymatgen/analysis/solar copying src/pymatgen/analysis/solar/__init__.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/solar copying src/pymatgen/analysis/solar/slme.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/solar creating build/lib.linux-i686-cpython-312/pymatgen/analysis/magnetism copying src/pymatgen/analysis/magnetism/heisenberg.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/magnetism copying src/pymatgen/analysis/magnetism/jahnteller.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/magnetism copying src/pymatgen/analysis/magnetism/analyzer.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/magnetism copying src/pymatgen/analysis/magnetism/__init__.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/magnetism creating build/lib.linux-i686-cpython-312/pymatgen/analysis/xas copying src/pymatgen/analysis/xas/spectrum.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/xas copying src/pymatgen/analysis/xas/__init__.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/xas creating build/lib.linux-i686-cpython-312/pymatgen/analysis/elasticity copying src/pymatgen/analysis/elasticity/strain.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/elasticity copying src/pymatgen/analysis/elasticity/__init__.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/elasticity copying src/pymatgen/analysis/elasticity/elastic.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/elasticity copying src/pymatgen/analysis/elasticity/stress.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/elasticity creating build/lib.linux-i686-cpython-312/pymatgen/analysis/topological copying src/pymatgen/analysis/topological/spillage.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/topological copying src/pymatgen/analysis/topological/__init__.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/topological creating build/lib.linux-i686-cpython-312/pymatgen/analysis/structure_prediction copying src/pymatgen/analysis/structure_prediction/substitutor.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/structure_prediction copying src/pymatgen/analysis/structure_prediction/substitution_probability.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/structure_prediction copying src/pymatgen/analysis/structure_prediction/volume_predictor.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/structure_prediction copying src/pymatgen/analysis/structure_prediction/dopant_predictor.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/structure_prediction copying src/pymatgen/analysis/structure_prediction/__init__.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/structure_prediction creating build/lib.linux-i686-cpython-312/pymatgen/analysis/interfaces copying src/pymatgen/analysis/interfaces/coherent_interfaces.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/interfaces copying src/pymatgen/analysis/interfaces/substrate_analyzer.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/interfaces copying src/pymatgen/analysis/interfaces/zsl.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/interfaces copying src/pymatgen/analysis/interfaces/__init__.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/interfaces creating build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/connectivity copying src/pymatgen/analysis/chemenv/connectivity/structure_connectivity.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/connectivity copying src/pymatgen/analysis/chemenv/connectivity/connectivity_finder.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/connectivity copying src/pymatgen/analysis/chemenv/connectivity/connected_components.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/connectivity copying src/pymatgen/analysis/chemenv/connectivity/__init__.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/connectivity copying src/pymatgen/analysis/chemenv/connectivity/environment_nodes.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/connectivity creating build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments copying src/pymatgen/analysis/chemenv/coordination_environments/structure_environments.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometry_finder.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments copying src/pymatgen/analysis/chemenv/coordination_environments/__init__.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments copying src/pymatgen/analysis/chemenv/coordination_environments/chemenv_strategies.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments copying src/pymatgen/analysis/chemenv/coordination_environments/voronoi.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments creating build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/utils copying src/pymatgen/analysis/chemenv/utils/func_utils.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/utils copying src/pymatgen/analysis/chemenv/utils/chemenv_config.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/utils copying src/pymatgen/analysis/chemenv/utils/math_utils.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/utils copying src/pymatgen/analysis/chemenv/utils/coordination_geometry_utils.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/utils copying src/pymatgen/analysis/chemenv/utils/__init__.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/utils copying src/pymatgen/analysis/chemenv/utils/chemenv_errors.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/utils copying src/pymatgen/analysis/chemenv/utils/graph_utils.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/utils copying src/pymatgen/analysis/chemenv/utils/defs_utils.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/utils copying src/pymatgen/analysis/chemenv/utils/scripts_utils.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/utils creating build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/__init__.py -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files creating build/lib.linux-i686-cpython-312/pymatgen/util/testing copying src/pymatgen/util/testing/__init__.py -> build/lib.linux-i686-cpython-312/pymatgen/util/testing creating build/lib.linux-i686-cpython-312/pymatgen/io/lobster copying src/pymatgen/io/lobster/outputs.py -> build/lib.linux-i686-cpython-312/pymatgen/io/lobster copying src/pymatgen/io/lobster/inputs.py -> build/lib.linux-i686-cpython-312/pymatgen/io/lobster copying src/pymatgen/io/lobster/__init__.py -> build/lib.linux-i686-cpython-312/pymatgen/io/lobster copying src/pymatgen/io/lobster/lobsterenv.py -> build/lib.linux-i686-cpython-312/pymatgen/io/lobster creating build/lib.linux-i686-cpython-312/pymatgen/io/cp2k copying src/pymatgen/io/cp2k/outputs.py -> build/lib.linux-i686-cpython-312/pymatgen/io/cp2k copying src/pymatgen/io/cp2k/utils.py -> build/lib.linux-i686-cpython-312/pymatgen/io/cp2k copying src/pymatgen/io/cp2k/inputs.py -> build/lib.linux-i686-cpython-312/pymatgen/io/cp2k copying src/pymatgen/io/cp2k/__init__.py -> build/lib.linux-i686-cpython-312/pymatgen/io/cp2k copying src/pymatgen/io/cp2k/sets.py -> build/lib.linux-i686-cpython-312/pymatgen/io/cp2k creating build/lib.linux-i686-cpython-312/pymatgen/io/vasp copying src/pymatgen/io/vasp/optics.py -> build/lib.linux-i686-cpython-312/pymatgen/io/vasp copying src/pymatgen/io/vasp/outputs.py -> build/lib.linux-i686-cpython-312/pymatgen/io/vasp copying src/pymatgen/io/vasp/inputs.py -> build/lib.linux-i686-cpython-312/pymatgen/io/vasp copying src/pymatgen/io/vasp/__init__.py -> build/lib.linux-i686-cpython-312/pymatgen/io/vasp copying src/pymatgen/io/vasp/help.py -> build/lib.linux-i686-cpython-312/pymatgen/io/vasp copying src/pymatgen/io/vasp/sets.py -> build/lib.linux-i686-cpython-312/pymatgen/io/vasp creating build/lib.linux-i686-cpython-312/pymatgen/io/xtb copying src/pymatgen/io/xtb/outputs.py -> build/lib.linux-i686-cpython-312/pymatgen/io/xtb copying src/pymatgen/io/xtb/inputs.py -> build/lib.linux-i686-cpython-312/pymatgen/io/xtb copying src/pymatgen/io/xtb/__init__.py -> build/lib.linux-i686-cpython-312/pymatgen/io/xtb creating build/lib.linux-i686-cpython-312/pymatgen/io/feff copying src/pymatgen/io/feff/outputs.py -> build/lib.linux-i686-cpython-312/pymatgen/io/feff copying src/pymatgen/io/feff/inputs.py -> build/lib.linux-i686-cpython-312/pymatgen/io/feff copying src/pymatgen/io/feff/__init__.py -> build/lib.linux-i686-cpython-312/pymatgen/io/feff copying src/pymatgen/io/feff/sets.py -> build/lib.linux-i686-cpython-312/pymatgen/io/feff creating build/lib.linux-i686-cpython-312/pymatgen/io/lammps copying src/pymatgen/io/lammps/outputs.py -> build/lib.linux-i686-cpython-312/pymatgen/io/lammps copying src/pymatgen/io/lammps/utils.py -> build/lib.linux-i686-cpython-312/pymatgen/io/lammps copying src/pymatgen/io/lammps/inputs.py -> build/lib.linux-i686-cpython-312/pymatgen/io/lammps copying src/pymatgen/io/lammps/generators.py -> build/lib.linux-i686-cpython-312/pymatgen/io/lammps copying src/pymatgen/io/lammps/__init__.py -> build/lib.linux-i686-cpython-312/pymatgen/io/lammps copying src/pymatgen/io/lammps/data.py -> build/lib.linux-i686-cpython-312/pymatgen/io/lammps copying src/pymatgen/io/lammps/sets.py -> build/lib.linux-i686-cpython-312/pymatgen/io/lammps creating build/lib.linux-i686-cpython-312/pymatgen/io/qchem copying src/pymatgen/io/qchem/outputs.py -> build/lib.linux-i686-cpython-312/pymatgen/io/qchem copying src/pymatgen/io/qchem/utils.py -> build/lib.linux-i686-cpython-312/pymatgen/io/qchem copying src/pymatgen/io/qchem/inputs.py -> build/lib.linux-i686-cpython-312/pymatgen/io/qchem copying src/pymatgen/io/qchem/__init__.py -> build/lib.linux-i686-cpython-312/pymatgen/io/qchem copying src/pymatgen/io/qchem/sets.py -> build/lib.linux-i686-cpython-312/pymatgen/io/qchem creating build/lib.linux-i686-cpython-312/pymatgen/io/aims copying src/pymatgen/io/aims/outputs.py -> build/lib.linux-i686-cpython-312/pymatgen/io/aims copying src/pymatgen/io/aims/inputs.py -> build/lib.linux-i686-cpython-312/pymatgen/io/aims copying src/pymatgen/io/aims/__init__.py -> build/lib.linux-i686-cpython-312/pymatgen/io/aims copying src/pymatgen/io/aims/parsers.py -> build/lib.linux-i686-cpython-312/pymatgen/io/aims creating build/lib.linux-i686-cpython-312/pymatgen/io/abinit copying src/pymatgen/io/abinit/abiobjects.py -> build/lib.linux-i686-cpython-312/pymatgen/io/abinit copying src/pymatgen/io/abinit/variable.py -> build/lib.linux-i686-cpython-312/pymatgen/io/abinit copying src/pymatgen/io/abinit/inputs.py -> build/lib.linux-i686-cpython-312/pymatgen/io/abinit copying src/pymatgen/io/abinit/netcdf.py -> build/lib.linux-i686-cpython-312/pymatgen/io/abinit copying src/pymatgen/io/abinit/__init__.py -> build/lib.linux-i686-cpython-312/pymatgen/io/abinit copying src/pymatgen/io/abinit/pseudos.py -> build/lib.linux-i686-cpython-312/pymatgen/io/abinit copying src/pymatgen/io/abinit/abitimer.py -> build/lib.linux-i686-cpython-312/pymatgen/io/abinit creating build/lib.linux-i686-cpython-312/pymatgen/io/exciting copying src/pymatgen/io/exciting/inputs.py -> build/lib.linux-i686-cpython-312/pymatgen/io/exciting copying src/pymatgen/io/exciting/__init__.py -> build/lib.linux-i686-cpython-312/pymatgen/io/exciting creating build/lib.linux-i686-cpython-312/pymatgen/io/pwmat copying src/pymatgen/io/pwmat/outputs.py -> build/lib.linux-i686-cpython-312/pymatgen/io/pwmat copying src/pymatgen/io/pwmat/inputs.py -> build/lib.linux-i686-cpython-312/pymatgen/io/pwmat copying src/pymatgen/io/pwmat/__init__.py -> build/lib.linux-i686-cpython-312/pymatgen/io/pwmat creating build/lib.linux-i686-cpython-312/pymatgen/io/aims/sets copying src/pymatgen/io/aims/sets/magnetism.py -> build/lib.linux-i686-cpython-312/pymatgen/io/aims/sets copying src/pymatgen/io/aims/sets/core.py -> build/lib.linux-i686-cpython-312/pymatgen/io/aims/sets copying src/pymatgen/io/aims/sets/base.py -> build/lib.linux-i686-cpython-312/pymatgen/io/aims/sets copying src/pymatgen/io/aims/sets/__init__.py -> build/lib.linux-i686-cpython-312/pymatgen/io/aims/sets copying src/pymatgen/io/aims/sets/bs.py -> build/lib.linux-i686-cpython-312/pymatgen/io/aims/sets copying src/pymatgen/py.typed -> build/lib.linux-i686-cpython-312/pymatgen copying src/pymatgen/core/bond_lengths.json -> build/lib.linux-i686-cpython-312/pymatgen/core copying src/pymatgen/core/reconstructions_archive.json -> build/lib.linux-i686-cpython-312/pymatgen/core copying src/pymatgen/core/quad_data.json -> build/lib.linux-i686-cpython-312/pymatgen/core copying src/pymatgen/core/func_groups.json -> build/lib.linux-i686-cpython-312/pymatgen/core copying src/pymatgen/core/libxc_docs.json -> build/lib.linux-i686-cpython-312/pymatgen/core copying src/pymatgen/core/periodic_table.json -> build/lib.linux-i686-cpython-312/pymatgen/core copying src/pymatgen/command_line/lewis.lib -> build/lib.linux-i686-cpython-312/pymatgen/command_line copying src/pymatgen/command_line/OxideTersoffPotentials -> build/lib.linux-i686-cpython-312/pymatgen/command_line copying src/pymatgen/command_line/bush.lib -> build/lib.linux-i686-cpython-312/pymatgen/command_line copying src/pymatgen/analysis/costdb_elements.csv -> build/lib.linux-i686-cpython-312/pymatgen/analysis copying src/pymatgen/analysis/atomic_subshell_photoionization_cross_sections.csv -> build/lib.linux-i686-cpython-312/pymatgen/analysis copying src/pymatgen/analysis/hhi_data.csv -> build/lib.linux-i686-cpython-312/pymatgen/analysis copying src/pymatgen/analysis/aflow_prototypes.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis copying src/pymatgen/analysis/ionic_radii.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis copying src/pymatgen/analysis/op_params.yaml -> build/lib.linux-i686-cpython-312/pymatgen/analysis copying src/pymatgen/analysis/bvparam_1991.yaml -> build/lib.linux-i686-cpython-312/pymatgen/analysis copying src/pymatgen/analysis/icsd_bv.yaml -> build/lib.linux-i686-cpython-312/pymatgen/analysis copying src/pymatgen/analysis/bonds_jmol_ob.yaml -> build/lib.linux-i686-cpython-312/pymatgen/analysis copying src/pymatgen/analysis/cn_opt_params.yaml -> build/lib.linux-i686-cpython-312/pymatgen/analysis copying src/pymatgen/analysis/vesta_cutoffs.yaml -> build/lib.linux-i686-cpython-312/pymatgen/analysis copying src/pymatgen/entries/calc_compounds.json.gz -> build/lib.linux-i686-cpython-312/pymatgen/entries copying src/pymatgen/entries/exp_compounds.json.gz -> build/lib.linux-i686-cpython-312/pymatgen/entries copying src/pymatgen/entries/MITCompatibility.yaml -> build/lib.linux-i686-cpython-312/pymatgen/entries copying src/pymatgen/entries/MPCompatibility.yaml -> build/lib.linux-i686-cpython-312/pymatgen/entries copying src/pymatgen/entries/MP2020Compatibility.yaml -> build/lib.linux-i686-cpython-312/pymatgen/entries creating build/lib.linux-i686-cpython-312/pymatgen/entries/data copying src/pymatgen/entries/data/g_els.json -> build/lib.linux-i686-cpython-312/pymatgen/entries/data copying src/pymatgen/entries/data/nist_gas_gf.json -> build/lib.linux-i686-cpython-312/pymatgen/entries/data copying src/pymatgen/vis/ElementColorSchemes.yaml -> build/lib.linux-i686-cpython-312/pymatgen/vis copying src/pymatgen/util/plotly_interface_rxn_layouts.json -> build/lib.linux-i686-cpython-312/pymatgen/util copying src/pymatgen/util/plotly_pd_layouts.json -> build/lib.linux-i686-cpython-312/pymatgen/util copying src/pymatgen/util/plotly_chempot_layouts.json -> build/lib.linux-i686-cpython-312/pymatgen/util creating build/lib.linux-i686-cpython-312/pymatgen/util/structures copying src/pymatgen/util/structures/La2CoO4F.json -> build/lib.linux-i686-cpython-312/pymatgen/util/structures copying src/pymatgen/util/structures/Li10GeP2S12.json -> build/lib.linux-i686-cpython-312/pymatgen/util/structures copying src/pymatgen/util/structures/SiO2.json -> build/lib.linux-i686-cpython-312/pymatgen/util/structures copying src/pymatgen/util/structures/Pb2TiZrO6.json -> build/lib.linux-i686-cpython-312/pymatgen/util/structures copying src/pymatgen/util/structures/NaFePO4.json -> build/lib.linux-i686-cpython-312/pymatgen/util/structures copying src/pymatgen/util/structures/K2O2.json -> build/lib.linux-i686-cpython-312/pymatgen/util/structures copying src/pymatgen/util/structures/VO2.json -> build/lib.linux-i686-cpython-312/pymatgen/util/structures copying src/pymatgen/util/structures/Li2O2.json -> build/lib.linux-i686-cpython-312/pymatgen/util/structures copying src/pymatgen/util/structures/Sn.json -> build/lib.linux-i686-cpython-312/pymatgen/util/structures copying src/pymatgen/util/structures/LiFePO4.json -> build/lib.linux-i686-cpython-312/pymatgen/util/structures copying src/pymatgen/util/structures/SrTiO3.json -> build/lib.linux-i686-cpython-312/pymatgen/util/structures copying src/pymatgen/util/structures/Li2O.json -> build/lib.linux-i686-cpython-312/pymatgen/util/structures copying src/pymatgen/util/structures/Li3V2(PO4)3.json -> build/lib.linux-i686-cpython-312/pymatgen/util/structures copying src/pymatgen/util/structures/Si.json -> build/lib.linux-i686-cpython-312/pymatgen/util/structures copying src/pymatgen/util/structures/BaNiO3.json -> build/lib.linux-i686-cpython-312/pymatgen/util/structures copying src/pymatgen/util/structures/TlBiSe2.json -> build/lib.linux-i686-cpython-312/pymatgen/util/structures copying src/pymatgen/util/structures/CsCl.json -> build/lib.linux-i686-cpython-312/pymatgen/util/structures copying src/pymatgen/util/structures/TiO2.json -> build/lib.linux-i686-cpython-312/pymatgen/util/structures copying src/pymatgen/util/structures/He_BCC.json -> build/lib.linux-i686-cpython-312/pymatgen/util/structures copying src/pymatgen/util/structures/Graphite.json -> build/lib.linux-i686-cpython-312/pymatgen/util/structures copying src/pymatgen/util/structures/Si_SiO2_Interface.json -> build/lib.linux-i686-cpython-312/pymatgen/util/structures copying src/pymatgen/symmetry/symm_data.json -> build/lib.linux-i686-cpython-312/pymatgen/symmetry copying src/pymatgen/symmetry/symm_ops.json -> build/lib.linux-i686-cpython-312/pymatgen/symmetry copying src/pymatgen/symmetry/symm_data_magnetic.sqlite -> build/lib.linux-i686-cpython-312/pymatgen/symmetry copying src/pymatgen/symmetry/symm_ops.yaml -> build/lib.linux-i686-cpython-312/pymatgen/symmetry copying src/pymatgen/symmetry/symm_data.yaml -> build/lib.linux-i686-cpython-312/pymatgen/symmetry copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TC#9.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/S#10.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SS#4.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/H#11.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/A#2.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TI#9.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SMA#9.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SBT#8.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/T#6.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/BO_2#8.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/PP#6.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/MI#10.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/L#2.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/ET#7.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/BS_2#10.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/AC#12.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/FO#7.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TT#12.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/S#5.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TO_1#9.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SY#4.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/T#4.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TBT#8.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SBSA#10.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SA#8.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TO_3#9.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/C#8.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/S#12.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SH#13.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/H#10.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SC#12.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/C#12.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/I#12.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/BO_3#8.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/S#1.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SH#11.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/PB#7.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/PBP#12.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/CO#11.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/O#6.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TO_2#9.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/BS_1#10.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/PCPA#11.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/O#6_explicit.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TY#3.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/DD#8.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/PP#5.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/ST#7.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TT_3#9.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/DI#11.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SS#9.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/T#5.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/PA#10.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/S#4.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/HP#12.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TL#3.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/DDPN#8.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/DD#20.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TT_2#9.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/HD#9.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TS#3.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TBSA#10.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TT_1#9.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/PP#10.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/BO_1#8.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/HB#8.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/HA#12.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/allcg.txt -> build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying src/pymatgen/analysis/diffraction/neutron_scattering_length.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/diffraction copying src/pymatgen/analysis/diffraction/atomic_scattering_params.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/diffraction copying src/pymatgen/analysis/solar/am1.5G.dat -> build/lib.linux-i686-cpython-312/pymatgen/analysis/solar copying src/pymatgen/analysis/magnetism/default_magmoms.yaml -> build/lib.linux-i686-cpython-312/pymatgen/analysis/magnetism copying src/pymatgen/analysis/structure_prediction/DLS_bond_params.yaml -> build/lib.linux-i686-cpython-312/pymatgen/analysis/structure_prediction creating build/lib.linux-i686-cpython-312/pymatgen/analysis/structure_prediction/data copying src/pymatgen/analysis/structure_prediction/data/pair_correlation.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/structure_prediction/data copying src/pymatgen/analysis/structure_prediction/data/lambda.json -> build/lib.linux-i686-cpython-312/pymatgen/analysis/structure_prediction/data creating build/lib.linux-i686-cpython-312/pymatgen/io/lobster/lobster_basis copying src/pymatgen/io/lobster/lobster_basis/BASIS_PBE_54_min.yaml -> build/lib.linux-i686-cpython-312/pymatgen/io/lobster/lobster_basis copying src/pymatgen/io/lobster/lobster_basis/BASIS_PBE_54_standard.yaml -> build/lib.linux-i686-cpython-312/pymatgen/io/lobster/lobster_basis copying src/pymatgen/io/lobster/lobster_basis/BASIS_PBE_54_max.yaml -> build/lib.linux-i686-cpython-312/pymatgen/io/lobster/lobster_basis copying src/pymatgen/io/vasp/vasp_potcar_pymatgen_hashes.json -> build/lib.linux-i686-cpython-312/pymatgen/io/vasp copying src/pymatgen/io/vasp/incar_parameters.json -> build/lib.linux-i686-cpython-312/pymatgen/io/vasp copying src/pymatgen/io/vasp/vasp_potcar_file_hashes.json -> build/lib.linux-i686-cpython-312/pymatgen/io/vasp copying src/pymatgen/io/vasp/potcar-summary-stats.json.bz2 -> build/lib.linux-i686-cpython-312/pymatgen/io/vasp copying src/pymatgen/io/vasp/MPSCANRelaxSet.yaml -> build/lib.linux-i686-cpython-312/pymatgen/io/vasp copying src/pymatgen/io/vasp/MPHSERelaxSet.yaml -> build/lib.linux-i686-cpython-312/pymatgen/io/vasp copying src/pymatgen/io/vasp/MVLRelax52Set.yaml -> build/lib.linux-i686-cpython-312/pymatgen/io/vasp copying src/pymatgen/io/vasp/MVLGWSet.yaml -> build/lib.linux-i686-cpython-312/pymatgen/io/vasp copying src/pymatgen/io/vasp/MITRelaxSet.yaml -> build/lib.linux-i686-cpython-312/pymatgen/io/vasp copying src/pymatgen/io/vasp/MPAbsorptionSet.yaml -> build/lib.linux-i686-cpython-312/pymatgen/io/vasp copying src/pymatgen/io/vasp/PBE64Base.yaml -> build/lib.linux-i686-cpython-312/pymatgen/io/vasp copying src/pymatgen/io/vasp/MatPESStaticSet.yaml -> build/lib.linux-i686-cpython-312/pymatgen/io/vasp copying src/pymatgen/io/vasp/MPRelaxSet.yaml -> build/lib.linux-i686-cpython-312/pymatgen/io/vasp copying src/pymatgen/io/vasp/vdW_parameters.yaml -> build/lib.linux-i686-cpython-312/pymatgen/io/vasp copying src/pymatgen/io/vasp/PBE54Base.yaml -> build/lib.linux-i686-cpython-312/pymatgen/io/vasp copying src/pymatgen/io/vasp/VASPIncarBase.yaml -> build/lib.linux-i686-cpython-312/pymatgen/io/vasp copying src/pymatgen/io/feff/MPELNESSet.yaml -> build/lib.linux-i686-cpython-312/pymatgen/io/feff copying src/pymatgen/io/feff/MPEXAFSSet.yaml -> build/lib.linux-i686-cpython-312/pymatgen/io/feff copying src/pymatgen/io/feff/MPXANESSet.yaml -> build/lib.linux-i686-cpython-312/pymatgen/io/feff copying src/pymatgen/io/feff/MPEXELFSSet.yaml -> build/lib.linux-i686-cpython-312/pymatgen/io/feff copying src/pymatgen/io/lammps/CoeffsDataType.yaml -> build/lib.linux-i686-cpython-312/pymatgen/io/lammps creating build/lib.linux-i686-cpython-312/pymatgen/io/lammps/templates copying src/pymatgen/io/lammps/templates/msd.template -> build/lib.linux-i686-cpython-312/pymatgen/io/lammps/templates copying src/pymatgen/io/lammps/templates/minimization.template -> build/lib.linux-i686-cpython-312/pymatgen/io/lammps/templates copying src/pymatgen/io/lammps/templates/md.template -> build/lib.linux-i686-cpython-312/pymatgen/io/lammps/templates copying src/pymatgen/io/lammps/templates/thermalization.template -> build/lib.linux-i686-cpython-312/pymatgen/io/lammps/templates running build_ext Compiling src/pymatgen/optimization/linear_assignment.pyx because it changed. [1/1] Cythonizing src/pymatgen/optimization/linear_assignment.pyx building 'pymatgen.optimization.linear_assignment' extension creating build/temp.linux-i686-cpython-312 creating build/temp.linux-i686-cpython-312/src creating build/temp.linux-i686-cpython-312/src/pymatgen creating build/temp.linux-i686-cpython-312/src/pymatgen/optimization i686-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymatgen-2024.10.29+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c src/pymatgen/optimization/linear_assignment.c -o build/temp.linux-i686-cpython-312/src/pymatgen/optimization/linear_assignment.o In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5, from src/pymatgen/optimization/linear_assignment.c:1240: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ src/pymatgen/optimization/linear_assignment.c: In function '__pyx_f_8pymatgen_12optimization_17linear_assignment_compute.isra': src/pymatgen/optimization/linear_assignment.c:20840:94: warning: '__pyx_v_j2' may be used uninitialized [-Wmaybe-uninitialized] 20840 | __pyx_v_i1 = (*((__pyx_t_5numpy_int64_t *) ( /* dim=0 */ (__pyx_v_y.data + __pyx_t_5 * __pyx_v_y.strides[0]) ))); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ src/pymatgen/optimization/linear_assignment.c:20055:7: note: '__pyx_v_j2' was declared here 20055 | int __pyx_v_j2; | ^~~~~~~~~~ src/pymatgen/optimization/linear_assignment.c:21552:26: warning: '__pyx_v_last' may be used uninitialized [-Wmaybe-uninitialized] 21552 | __pyx_t_13 = (__pyx_v_last + 1); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ src/pymatgen/optimization/linear_assignment.c:20041:7: note: '__pyx_v_last' was declared here 20041 | int __pyx_v_last; | ^~~~~~~~~~~~ src/pymatgen/optimization/linear_assignment.c:21462:18: warning: '__pyx_v_m' may be used uninitialized [-Wmaybe-uninitialized] 21462 | __pyx_v_u1 = (((*((__pyx_t_5numpy_float_t *) ( /* dim=1 */ (( /* dim=0 */ (__pyx_v_c.data + __pyx_t_4 * __pyx_v_c.strides[0]) ) + __pyx_t_5 * __pyx_v_c.strides[1]) ))) - (__pyx_v_v[__pyx_v_j1])) - __pyx_v_m); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/pymatgen/optimization/linear_assignment.c:20051:26: note: '__pyx_v_m' was declared here 20051 | __pyx_t_5numpy_float_t __pyx_v_m; | ^~~~~~~~~ i686-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymatgen-2024.10.29+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-i686-cpython-312/src/pymatgen/optimization/linear_assignment.o -L/usr/lib/i386-linux-gnu -o build/lib.linux-i686-cpython-312/pymatgen/optimization/linear_assignment.cpython-312-i386-linux-gnu.so performance hint: src/pymatgen/util/coord_cython.pyx:36:5: Exception check on 'dot_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare 'dot_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'dot_2d' to allow an error code to be returned. performance hint: src/pymatgen/util/coord_cython.pyx:51:5: Exception check on 'dot_2d_mod' will always require the GIL to be acquired. Possible solutions: 1. Declare 'dot_2d_mod' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'dot_2d_mod' to allow an error code to be returned. warning: src/pymatgen/util/coord_cython.pyx:219:25: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. warning: src/pymatgen/util/coord_cython.pyx:268:41: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. Compiling src/pymatgen/util/coord_cython.pyx because it changed. [1/1] Cythonizing src/pymatgen/util/coord_cython.pyx building 'pymatgen.util.coord_cython' extension creating build/temp.linux-i686-cpython-312/src/pymatgen/util i686-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymatgen-2024.10.29+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c src/pymatgen/util/coord_cython.c -o build/temp.linux-i686-cpython-312/src/pymatgen/util/coord_cython.o In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5, from src/pymatgen/util/coord_cython.c:1240: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ src/pymatgen/util/coord_cython.c: In function '__pyx_pf_8pymatgen_4util_12coord_cython_pbc_shortest_vectors.isra': src/pymatgen/util/coord_cython.c:22276:488: warning: '__pyx_v_bestk' may be used uninitialized [-Wmaybe-uninitialized] 22276 | *((__pyx_t_5numpy_float_t *) ( /* dim=2 */ ((char *) (((__pyx_t_5numpy_float_t *) ( /* dim=1 */ (( /* dim=0 */ (__pyx_v_vs.data + __pyx_t_30 * __pyx_v_vs.strides[0]) ) + __pyx_t_31 * __pyx_v_vs.strides[1]) )) + __pyx_t_34)) )) = ((*((__pyx_t_5numpy_float_t *) ( /* dim=0 */ (__pyx_v_pre_im.data + __pyx_t_16 * __pyx_v_pre_im.strides[0]) ))) + (*((__pyx_t_5numpy_float_t *) ( /* dim=1 */ ((char *) (((__pyx_t_5numpy_float_t *) ( /* dim=0 */ (__pyx_v_cart_im.data + __pyx_t_29 * __pyx_v_cart_im.strides[0]) )) + __pyx_t_15)) )))); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/pymatgen/util/coord_cython.c:21017:7: note: '__pyx_v_bestk' was declared here 21017 | int __pyx_v_bestk; | ^~~~~~~~~~~~~ i686-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymatgen-2024.10.29+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-i686-cpython-312/src/pymatgen/util/coord_cython.o -L/usr/lib/i386-linux-gnu -o build/lib.linux-i686-cpython-312/pymatgen/util/coord_cython.cpython-312-i386-linux-gnu.so performance hint: src/pymatgen/optimization/neighbors.pyx:525:5: Exception check on 'get_bounds' will always require the GIL to be acquired. Possible solutions: 1. Declare 'get_bounds' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'get_bounds' to allow an error code to be returned. performance hint: src/pymatgen/optimization/neighbors.pyx:552:5: Exception check on 'get_frac_coords' will always require the GIL to be acquired. Possible solutions: 1. Declare 'get_frac_coords' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'get_frac_coords' to allow an error code to be returned. performance hint: src/pymatgen/optimization/neighbors.pyx:564:5: Exception check on 'matmul' will always require the GIL to be acquired. Possible solutions: 1. Declare 'matmul' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'matmul' to allow an error code to be returned. performance hint: src/pymatgen/optimization/neighbors.pyx:582:5: Exception check on 'matrix_inv' will always require the GIL to be acquired. Possible solutions: 1. Declare 'matrix_inv' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'matrix_inv' to allow an error code to be returned. performance hint: src/pymatgen/optimization/neighbors.pyx:610:5: Exception check on 'get_max_rep' will always require the GIL to be acquired. Possible solutions: 1. Declare 'get_max_rep' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'get_max_rep' to allow an error code to be returned. performance hint: src/pymatgen/optimization/neighbors.pyx:626:5: Exception check on 'get_reciprocal_lattice' will always require the GIL to be acquired. Possible solutions: 1. Declare 'get_reciprocal_lattice' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'get_reciprocal_lattice' to allow an error code to be returned. performance hint: src/pymatgen/optimization/neighbors.pyx:641:5: Exception check on 'recip_component' will always require the GIL to be acquired. Possible solutions: 1. Declare 'recip_component' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'recip_component' to allow an error code to be returned. performance hint: src/pymatgen/optimization/neighbors.pyx:675:5: Exception check on 'cross' will always require the GIL to be acquired. Possible solutions: 1. Declare 'cross' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'cross' to allow an error code to be returned. performance hint: src/pymatgen/optimization/neighbors.pyx:702:5: Exception check on 'get_max_and_min' will always require the GIL to be acquired. Possible solutions: 1. Declare 'get_max_and_min' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'get_max_and_min' to allow an error code to be returned. performance hint: src/pymatgen/optimization/neighbors.pyx:726:5: Exception check on 'compute_cube_index' will always require the GIL to be acquired. Possible solutions: 1. Declare 'compute_cube_index' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'compute_cube_index' to allow an error code to be returned. performance hint: src/pymatgen/optimization/neighbors.pyx:743:5: Exception check on 'three_to_one' will always require the GIL to be acquired. Possible solutions: 1. Declare 'three_to_one' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'three_to_one' to allow an error code to be returned. performance hint: src/pymatgen/optimization/neighbors.pyx:778:5: Exception check on 'offset_cube' will always require the GIL to be acquired. Possible solutions: 1. Declare 'offset_cube' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'offset_cube' to allow an error code to be returned. performance hint: src/pymatgen/optimization/neighbors.pyx:496:27: Exception check after calling 'offset_cube' will always require the GIL to be acquired. Possible solutions: 1. Declare 'offset_cube' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'offset_cube' to allow an error code to be returned. performance hint: src/pymatgen/optimization/neighbors.pyx:541:19: Exception check after calling 'get_max_and_min' will always require the GIL to be acquired. Possible solutions: 1. Declare 'get_max_and_min' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'get_max_and_min' to allow an error code to be returned. performance hint: src/pymatgen/optimization/neighbors.pyx:561:14: Exception check after calling 'matrix_inv' will always require the GIL to be acquired. Possible solutions: 1. Declare 'matrix_inv' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'matrix_inv' to allow an error code to be returned. performance hint: src/pymatgen/optimization/neighbors.pyx:562:10: Exception check after calling 'matmul' will always require the GIL to be acquired. Possible solutions: 1. Declare 'matmul' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'matmul' to allow an error code to be returned. performance hint: src/pymatgen/optimization/neighbors.pyx:635:23: Exception check after calling 'recip_component' will always require the GIL to be acquired. Possible solutions: 1. Declare 'recip_component' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'recip_component' to allow an error code to be returned. performance hint: src/pymatgen/optimization/neighbors.pyx:655:9: Exception check after calling 'cross' will always require the GIL to be acquired. Possible solutions: 1. Declare 'cross' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'cross' to allow an error code to be returned. Compiling src/pymatgen/optimization/neighbors.pyx because it changed. [1/1] Cythonizing src/pymatgen/optimization/neighbors.pyx building 'pymatgen.optimization.neighbors' extension i686-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymatgen-2024.10.29+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c src/pymatgen/optimization/neighbors.c -o build/temp.linux-i686-cpython-312/src/pymatgen/optimization/neighbors.o In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5, from src/pymatgen/optimization/neighbors.c:1241: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ src/pymatgen/optimization/neighbors.c: In function '__pyx_pf_8pymatgen_12optimization_9neighbors_find_points_in_spheres': src/pymatgen/optimization/neighbors.c:21465:97: warning: passing argument 3 of '__pyx_f_8pymatgen_12optimization_9neighbors_get_bounds' discards 'const' qualifier from pointer target type [-Wdiscarded-qualifiers] 21465 | __pyx_f_8pymatgen_12optimization_9neighbors_get_bounds(__pyx_v_frac_coords, __pyx_v_max_rep, (&(*((__pyx_t_5numpy_int64_t const *) ( /* dim=0 */ ((char *) (((__pyx_t_5numpy_int64_t const *) __pyx_v_pbc.data) + __pyx_t_30)) )))), __pyx_v_max_bounds, __pyx_v_min_bounds); if (unlikely(PyErr_Occurred())) __PYX_ERR(0, 172, __pyx_L1_error) | ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/pymatgen/optimization/neighbors.c:3237:98: note: expected '__pyx_t_5numpy_int64_t *' {aka 'long long int *'} but argument is of type 'const __pyx_t_5numpy_int64_t *' {aka 'const long long int *'} 3237 | static void __pyx_f_8pymatgen_12optimization_9neighbors_get_bounds(__Pyx_memviewslice, double *, __pyx_t_5numpy_int64_t *, __pyx_t_5numpy_int64_t *, __pyx_t_5numpy_int64_t *); /*proto*/ | ^~~~~~~~~~~~~~~~~~~~~~~~ src/pymatgen/optimization/neighbors.c:22606:35: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 22606 | for (__pyx_t_33 = 0; __pyx_t_33 < __pyx_t_21; __pyx_t_33+=1) { | ^ src/pymatgen/optimization/neighbors.c: In function '__pyx_f_8pymatgen_12optimization_9neighbors_recip_component': src/pymatgen/optimization/neighbors.c:25529:54: warning: passing argument 1 of '__pyx_f_8pymatgen_12optimization_9neighbors_cross' discards 'const' qualifier from pointer target type [-Wdiscarded-qualifiers] 25529 | __pyx_f_8pymatgen_12optimization_9neighbors_cross((&(*((double const *) ( /* dim=0 */ ((char *) (((double const *) __pyx_v_a2.data) + __pyx_t_1)) )))), (&(*((double const *) ( /* dim=0 */ ((char *) (((double const *) __pyx_v_a3.data) + __pyx_t_2)) )))), __pyx_v_ai_cross_aj); if (unlikely(__Pyx_ErrOccurredWithGIL())) __PYX_ERR(0, 655, __pyx_L1_error) | ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/pymatgen/optimization/neighbors.c:3246:63: note: expected 'double *' but argument is of type 'const double *' 3246 | static void __pyx_f_8pymatgen_12optimization_9neighbors_cross(double *, double *, double *); /*proto*/ | ^~~~~~~~ src/pymatgen/optimization/neighbors.c:25529:158: warning: passing argument 2 of '__pyx_f_8pymatgen_12optimization_9neighbors_cross' discards 'const' qualifier from pointer target type [-Wdiscarded-qualifiers] 25529 | __pyx_f_8pymatgen_12optimization_9neighbors_cross((&(*((double const *) ( /* dim=0 */ ((char *) (((double const *) __pyx_v_a2.data) + __pyx_t_1)) )))), (&(*((double const *) ( /* dim=0 */ ((char *) (((double const *) __pyx_v_a3.data) + __pyx_t_2)) )))), __pyx_v_ai_cross_aj); if (unlikely(__Pyx_ErrOccurredWithGIL())) __PYX_ERR(0, 655, __pyx_L1_error) | ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/pymatgen/optimization/neighbors.c:3246:73: note: expected 'double *' but argument is of type 'const double *' 3246 | static void __pyx_f_8pymatgen_12optimization_9neighbors_cross(double *, double *, double *); /*proto*/ | ^~~~~~~~ src/pymatgen/optimization/neighbors.c:25539:66: warning: passing argument 1 of '__pyx_f_8pymatgen_12optimization_9neighbors_inner' discards 'const' qualifier from pointer target type [-Wdiscarded-qualifiers] 25539 | __pyx_t_3 = __pyx_f_8pymatgen_12optimization_9neighbors_inner((&(*((double const *) ( /* dim=0 */ ((char *) (((double const *) __pyx_v_a1.data) + __pyx_t_2)) )))), __pyx_v_ai_cross_aj); if (unlikely(__pyx_t_3 == ((double)-1) && __Pyx_ErrOccurredWithGIL())) __PYX_ERR(0, 656, __pyx_L1_error) | ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/pymatgen/optimization/neighbors.c:3245:65: note: expected 'double *' but argument is of type 'const double *' 3245 | static double __pyx_f_8pymatgen_12optimization_9neighbors_inner(double *, double *); /*proto*/ | ^~~~~~~~ src/pymatgen/optimization/neighbors.c: In function '__pyx_f_8pymatgen_12optimization_9neighbors_compute_cube_index': src/pymatgen/optimization/neighbors.c:26007:33: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'Py_ssize_t' {aka 'int'} [-Wsign-compare] 26007 | for (__pyx_t_3 = 0; __pyx_t_3 < __pyx_t_2; __pyx_t_3+=1) { | ^ src/pymatgen/optimization/neighbors.c:26019:35: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'Py_ssize_t' {aka 'int'} [-Wsign-compare] 26019 | for (__pyx_t_6 = 0; __pyx_t_6 < __pyx_t_5; __pyx_t_6+=1) { | ^ i686-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymatgen-2024.10.29+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-i686-cpython-312/src/pymatgen/optimization/neighbors.o -L/usr/lib/i386-linux-gnu -o build/lib.linux-i686-cpython-312/pymatgen/optimization/neighbors.cpython-312-i386-linux-gnu.so installing to build/bdist.linux-i686/wheel running install running install_lib creating build/bdist.linux-i686 creating build/bdist.linux-i686/wheel creating build/bdist.linux-i686/wheel/pymatgen creating build/bdist.linux-i686/wheel/pymatgen/core copying build/lib.linux-i686-cpython-312/pymatgen/core/surface.py -> build/bdist.linux-i686/wheel/./pymatgen/core copying build/lib.linux-i686-cpython-312/pymatgen/core/tensors.py -> build/bdist.linux-i686/wheel/./pymatgen/core copying build/lib.linux-i686-cpython-312/pymatgen/core/libxcfunc.py -> build/bdist.linux-i686/wheel/./pymatgen/core copying build/lib.linux-i686-cpython-312/pymatgen/core/bonds.py -> build/bdist.linux-i686/wheel/./pymatgen/core copying build/lib.linux-i686-cpython-312/pymatgen/core/periodic_table.py -> build/bdist.linux-i686/wheel/./pymatgen/core copying build/lib.linux-i686-cpython-312/pymatgen/core/trajectory.py -> build/bdist.linux-i686/wheel/./pymatgen/core copying build/lib.linux-i686-cpython-312/pymatgen/core/xcfunc.py -> build/bdist.linux-i686/wheel/./pymatgen/core copying build/lib.linux-i686-cpython-312/pymatgen/core/units.py -> build/bdist.linux-i686/wheel/./pymatgen/core copying build/lib.linux-i686-cpython-312/pymatgen/core/bond_lengths.json -> build/bdist.linux-i686/wheel/./pymatgen/core copying build/lib.linux-i686-cpython-312/pymatgen/core/reconstructions_archive.json -> build/bdist.linux-i686/wheel/./pymatgen/core copying build/lib.linux-i686-cpython-312/pymatgen/core/spectrum.py -> build/bdist.linux-i686/wheel/./pymatgen/core copying build/lib.linux-i686-cpython-312/pymatgen/core/composition.py -> build/bdist.linux-i686/wheel/./pymatgen/core copying build/lib.linux-i686-cpython-312/pymatgen/core/quad_data.json -> build/bdist.linux-i686/wheel/./pymatgen/core copying build/lib.linux-i686-cpython-312/pymatgen/core/interface.py -> build/bdist.linux-i686/wheel/./pymatgen/core copying build/lib.linux-i686-cpython-312/pymatgen/core/func_groups.json -> build/bdist.linux-i686/wheel/./pymatgen/core copying build/lib.linux-i686-cpython-312/pymatgen/core/libxc_docs.json -> build/bdist.linux-i686/wheel/./pymatgen/core copying build/lib.linux-i686-cpython-312/pymatgen/core/__init__.py -> build/bdist.linux-i686/wheel/./pymatgen/core copying build/lib.linux-i686-cpython-312/pymatgen/core/molecular_orbitals.py -> build/bdist.linux-i686/wheel/./pymatgen/core copying build/lib.linux-i686-cpython-312/pymatgen/core/periodic_table.json -> build/bdist.linux-i686/wheel/./pymatgen/core copying build/lib.linux-i686-cpython-312/pymatgen/core/lattice.py -> build/bdist.linux-i686/wheel/./pymatgen/core copying build/lib.linux-i686-cpython-312/pymatgen/core/ion.py -> build/bdist.linux-i686/wheel/./pymatgen/core copying build/lib.linux-i686-cpython-312/pymatgen/core/operations.py -> build/bdist.linux-i686/wheel/./pymatgen/core copying build/lib.linux-i686-cpython-312/pymatgen/core/structure.py -> build/bdist.linux-i686/wheel/./pymatgen/core copying build/lib.linux-i686-cpython-312/pymatgen/core/sites.py -> build/bdist.linux-i686/wheel/./pymatgen/core creating build/bdist.linux-i686/wheel/pymatgen/alchemy copying build/lib.linux-i686-cpython-312/pymatgen/alchemy/transmuters.py -> build/bdist.linux-i686/wheel/./pymatgen/alchemy copying build/lib.linux-i686-cpython-312/pymatgen/alchemy/materials.py -> build/bdist.linux-i686/wheel/./pymatgen/alchemy copying build/lib.linux-i686-cpython-312/pymatgen/alchemy/__init__.py -> build/bdist.linux-i686/wheel/./pymatgen/alchemy copying build/lib.linux-i686-cpython-312/pymatgen/alchemy/filters.py -> build/bdist.linux-i686/wheel/./pymatgen/alchemy creating build/bdist.linux-i686/wheel/pymatgen/apps creating build/bdist.linux-i686/wheel/pymatgen/apps/battery copying build/lib.linux-i686-cpython-312/pymatgen/apps/battery/plotter.py -> build/bdist.linux-i686/wheel/./pymatgen/apps/battery copying build/lib.linux-i686-cpython-312/pymatgen/apps/battery/conversion_battery.py -> build/bdist.linux-i686/wheel/./pymatgen/apps/battery copying build/lib.linux-i686-cpython-312/pymatgen/apps/battery/battery_abc.py -> build/bdist.linux-i686/wheel/./pymatgen/apps/battery copying build/lib.linux-i686-cpython-312/pymatgen/apps/battery/analyzer.py -> build/bdist.linux-i686/wheel/./pymatgen/apps/battery copying build/lib.linux-i686-cpython-312/pymatgen/apps/battery/__init__.py -> build/bdist.linux-i686/wheel/./pymatgen/apps/battery copying build/lib.linux-i686-cpython-312/pymatgen/apps/battery/insertion_battery.py -> build/bdist.linux-i686/wheel/./pymatgen/apps/battery creating build/bdist.linux-i686/wheel/pymatgen/apps/borg copying build/lib.linux-i686-cpython-312/pymatgen/apps/borg/hive.py -> build/bdist.linux-i686/wheel/./pymatgen/apps/borg copying build/lib.linux-i686-cpython-312/pymatgen/apps/borg/queen.py -> build/bdist.linux-i686/wheel/./pymatgen/apps/borg copying build/lib.linux-i686-cpython-312/pymatgen/apps/borg/__init__.py -> build/bdist.linux-i686/wheel/./pymatgen/apps/borg copying build/lib.linux-i686-cpython-312/pymatgen/apps/__init__.py -> build/bdist.linux-i686/wheel/./pymatgen/apps creating build/bdist.linux-i686/wheel/pymatgen/command_line copying build/lib.linux-i686-cpython-312/pymatgen/command_line/bader_caller.py -> build/bdist.linux-i686/wheel/./pymatgen/command_line copying build/lib.linux-i686-cpython-312/pymatgen/command_line/mcsqs_caller.py -> build/bdist.linux-i686/wheel/./pymatgen/command_line copying build/lib.linux-i686-cpython-312/pymatgen/command_line/lewis.lib -> build/bdist.linux-i686/wheel/./pymatgen/command_line copying build/lib.linux-i686-cpython-312/pymatgen/command_line/enumlib_caller.py -> build/bdist.linux-i686/wheel/./pymatgen/command_line copying build/lib.linux-i686-cpython-312/pymatgen/command_line/vampire_caller.py -> build/bdist.linux-i686/wheel/./pymatgen/command_line copying build/lib.linux-i686-cpython-312/pymatgen/command_line/OxideTersoffPotentials -> build/bdist.linux-i686/wheel/./pymatgen/command_line copying build/lib.linux-i686-cpython-312/pymatgen/command_line/gulp_caller.py -> build/bdist.linux-i686/wheel/./pymatgen/command_line copying build/lib.linux-i686-cpython-312/pymatgen/command_line/critic2_caller.py -> build/bdist.linux-i686/wheel/./pymatgen/command_line copying build/lib.linux-i686-cpython-312/pymatgen/command_line/__init__.py -> build/bdist.linux-i686/wheel/./pymatgen/command_line copying build/lib.linux-i686-cpython-312/pymatgen/command_line/chargemol_caller.py -> build/bdist.linux-i686/wheel/./pymatgen/command_line copying build/lib.linux-i686-cpython-312/pymatgen/command_line/bush.lib -> build/bdist.linux-i686/wheel/./pymatgen/command_line creating build/bdist.linux-i686/wheel/pymatgen/analysis copying build/lib.linux-i686-cpython-312/pymatgen/analysis/reaction_calculator.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis copying build/lib.linux-i686-cpython-312/pymatgen/analysis/excitation.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis copying build/lib.linux-i686-cpython-312/pymatgen/analysis/hhi.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis creating build/bdist.linux-i686/wheel/pymatgen/analysis/ferroelectricity copying build/lib.linux-i686-cpython-312/pymatgen/analysis/ferroelectricity/polarization.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/ferroelectricity copying build/lib.linux-i686-cpython-312/pymatgen/analysis/ferroelectricity/__init__.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/ferroelectricity copying build/lib.linux-i686-cpython-312/pymatgen/analysis/dimensionality.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis copying build/lib.linux-i686-cpython-312/pymatgen/analysis/structure_analyzer.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis copying build/lib.linux-i686-cpython-312/pymatgen/analysis/op_params.yaml -> build/bdist.linux-i686/wheel/./pymatgen/analysis creating build/bdist.linux-i686/wheel/pymatgen/analysis/chemenv creating build/bdist.linux-i686/wheel/pymatgen/analysis/chemenv/connectivity copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/connectivity/structure_connectivity.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/connectivity copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/connectivity/connectivity_finder.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/connectivity copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/connectivity/connected_components.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/connectivity copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/connectivity/__init__.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/connectivity copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/connectivity/environment_nodes.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/connectivity copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/__init__.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv creating build/bdist.linux-i686/wheel/pymatgen/analysis/chemenv/coordination_environments creating build/bdist.linux-i686/wheel/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TC#9.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/S#10.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SS#4.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/H#11.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/A#2.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TI#9.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SMA#9.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SBT#8.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/T#6.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/BO_2#8.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/PP#6.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/MI#10.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/L#2.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/ET#7.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/BS_2#10.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/AC#12.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/FO#7.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TT#12.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/S#5.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TO_1#9.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SY#4.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/T#4.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TBT#8.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SBSA#10.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SA#8.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TO_3#9.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/C#8.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/S#12.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SH#13.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/H#10.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SC#12.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/C#12.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/I#12.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/BO_3#8.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/S#1.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SH#11.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/PB#7.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/PBP#12.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/CO#11.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/O#6.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TO_2#9.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/allcg.txt -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/BS_1#10.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/PCPA#11.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/O#6_explicit.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TY#3.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/DD#8.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/PP#5.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/ST#7.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/__init__.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TT_3#9.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/DI#11.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SS#9.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/T#5.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/PA#10.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/S#4.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/HP#12.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TL#3.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/DDPN#8.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/DD#20.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TT_2#9.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/HD#9.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TS#3.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TBSA#10.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TT_1#9.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/PP#10.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/BO_1#8.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/HB#8.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/HA#12.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/structure_environments.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/coordination_geometry_finder.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/__init__.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/chemenv_strategies.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/coordination_environments/voronoi.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/coordination_environments creating build/bdist.linux-i686/wheel/pymatgen/analysis/chemenv/utils copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/utils/func_utils.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/utils copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/utils/chemenv_config.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/utils copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/utils/math_utils.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/utils copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/utils/coordination_geometry_utils.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/utils copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/utils/__init__.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/utils copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/utils/chemenv_errors.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/utils copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/utils/graph_utils.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/utils copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/utils/defs_utils.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/utils copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chemenv/utils/scripts_utils.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/chemenv/utils copying build/lib.linux-i686-cpython-312/pymatgen/analysis/aflow_prototypes.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis copying build/lib.linux-i686-cpython-312/pymatgen/analysis/functional_groups.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis copying build/lib.linux-i686-cpython-312/pymatgen/analysis/bvparam_1991.yaml -> build/bdist.linux-i686/wheel/./pymatgen/analysis creating build/bdist.linux-i686/wheel/pymatgen/analysis/diffraction copying build/lib.linux-i686-cpython-312/pymatgen/analysis/diffraction/core.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/diffraction copying build/lib.linux-i686-cpython-312/pymatgen/analysis/diffraction/neutron.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/diffraction copying build/lib.linux-i686-cpython-312/pymatgen/analysis/diffraction/neutron_scattering_length.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/diffraction copying build/lib.linux-i686-cpython-312/pymatgen/analysis/diffraction/tem.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/diffraction copying build/lib.linux-i686-cpython-312/pymatgen/analysis/diffraction/xrd.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/diffraction copying build/lib.linux-i686-cpython-312/pymatgen/analysis/diffraction/__init__.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/diffraction copying build/lib.linux-i686-cpython-312/pymatgen/analysis/diffraction/atomic_scattering_params.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/diffraction copying build/lib.linux-i686-cpython-312/pymatgen/analysis/fragmenter.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis creating build/bdist.linux-i686/wheel/pymatgen/analysis/gb copying build/lib.linux-i686-cpython-312/pymatgen/analysis/gb/__init__.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/gb copying build/lib.linux-i686-cpython-312/pymatgen/analysis/gb/grain.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/gb copying build/lib.linux-i686-cpython-312/pymatgen/analysis/icsd_bv.yaml -> build/bdist.linux-i686/wheel/./pymatgen/analysis copying build/lib.linux-i686-cpython-312/pymatgen/analysis/phase_diagram.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis copying build/lib.linux-i686-cpython-312/pymatgen/analysis/local_env.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis copying build/lib.linux-i686-cpython-312/pymatgen/analysis/piezo.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis copying build/lib.linux-i686-cpython-312/pymatgen/analysis/disorder.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis copying build/lib.linux-i686-cpython-312/pymatgen/analysis/surface_analysis.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis creating build/bdist.linux-i686/wheel/pymatgen/analysis/solar copying build/lib.linux-i686-cpython-312/pymatgen/analysis/solar/am1.5G.dat -> build/bdist.linux-i686/wheel/./pymatgen/analysis/solar copying build/lib.linux-i686-cpython-312/pymatgen/analysis/solar/__init__.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/solar copying build/lib.linux-i686-cpython-312/pymatgen/analysis/solar/slme.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/solar copying build/lib.linux-i686-cpython-312/pymatgen/analysis/molecule_structure_comparator.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis copying build/lib.linux-i686-cpython-312/pymatgen/analysis/chempot_diagram.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis creating build/bdist.linux-i686/wheel/pymatgen/analysis/magnetism copying build/lib.linux-i686-cpython-312/pymatgen/analysis/magnetism/heisenberg.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/magnetism copying build/lib.linux-i686-cpython-312/pymatgen/analysis/magnetism/default_magmoms.yaml -> build/bdist.linux-i686/wheel/./pymatgen/analysis/magnetism copying build/lib.linux-i686-cpython-312/pymatgen/analysis/magnetism/jahnteller.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/magnetism copying build/lib.linux-i686-cpython-312/pymatgen/analysis/magnetism/analyzer.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/magnetism copying build/lib.linux-i686-cpython-312/pymatgen/analysis/magnetism/__init__.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/magnetism copying build/lib.linux-i686-cpython-312/pymatgen/analysis/prototypes.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis copying build/lib.linux-i686-cpython-312/pymatgen/analysis/cost.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis copying build/lib.linux-i686-cpython-312/pymatgen/analysis/structure_matcher.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis creating build/bdist.linux-i686/wheel/pymatgen/analysis/xas copying build/lib.linux-i686-cpython-312/pymatgen/analysis/xas/spectrum.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/xas copying build/lib.linux-i686-cpython-312/pymatgen/analysis/xas/__init__.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/xas copying build/lib.linux-i686-cpython-312/pymatgen/analysis/bonds_jmol_ob.yaml -> build/bdist.linux-i686/wheel/./pymatgen/analysis copying build/lib.linux-i686-cpython-312/pymatgen/analysis/costdb_elements.csv -> build/bdist.linux-i686/wheel/./pymatgen/analysis copying build/lib.linux-i686-cpython-312/pymatgen/analysis/eos.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis copying build/lib.linux-i686-cpython-312/pymatgen/analysis/graphs.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis copying build/lib.linux-i686-cpython-312/pymatgen/analysis/xps.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis creating build/bdist.linux-i686/wheel/pymatgen/analysis/elasticity copying build/lib.linux-i686-cpython-312/pymatgen/analysis/elasticity/strain.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/elasticity copying build/lib.linux-i686-cpython-312/pymatgen/analysis/elasticity/__init__.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/elasticity copying build/lib.linux-i686-cpython-312/pymatgen/analysis/elasticity/elastic.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/elasticity copying build/lib.linux-i686-cpython-312/pymatgen/analysis/elasticity/stress.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/elasticity copying build/lib.linux-i686-cpython-312/pymatgen/analysis/wulff.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis copying build/lib.linux-i686-cpython-312/pymatgen/analysis/bond_valence.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis copying build/lib.linux-i686-cpython-312/pymatgen/analysis/interface_reactions.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis copying build/lib.linux-i686-cpython-312/pymatgen/analysis/bond_dissociation.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis copying build/lib.linux-i686-cpython-312/pymatgen/analysis/quasirrho.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis copying build/lib.linux-i686-cpython-312/pymatgen/analysis/atomic_subshell_photoionization_cross_sections.csv -> build/bdist.linux-i686/wheel/./pymatgen/analysis creating build/bdist.linux-i686/wheel/pymatgen/analysis/topological copying build/lib.linux-i686-cpython-312/pymatgen/analysis/topological/spillage.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/topological copying build/lib.linux-i686-cpython-312/pymatgen/analysis/topological/__init__.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/topological copying build/lib.linux-i686-cpython-312/pymatgen/analysis/hhi_data.csv -> build/bdist.linux-i686/wheel/./pymatgen/analysis copying build/lib.linux-i686-cpython-312/pymatgen/analysis/quasiharmonic.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis copying build/lib.linux-i686-cpython-312/pymatgen/analysis/molecule_matcher.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis creating build/bdist.linux-i686/wheel/pymatgen/analysis/structure_prediction copying build/lib.linux-i686-cpython-312/pymatgen/analysis/structure_prediction/substitutor.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/structure_prediction copying build/lib.linux-i686-cpython-312/pymatgen/analysis/structure_prediction/substitution_probability.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/structure_prediction copying build/lib.linux-i686-cpython-312/pymatgen/analysis/structure_prediction/volume_predictor.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/structure_prediction creating build/bdist.linux-i686/wheel/pymatgen/analysis/structure_prediction/data copying build/lib.linux-i686-cpython-312/pymatgen/analysis/structure_prediction/data/pair_correlation.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/structure_prediction/data copying build/lib.linux-i686-cpython-312/pymatgen/analysis/structure_prediction/data/lambda.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis/structure_prediction/data copying build/lib.linux-i686-cpython-312/pymatgen/analysis/structure_prediction/dopant_predictor.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/structure_prediction copying build/lib.linux-i686-cpython-312/pymatgen/analysis/structure_prediction/__init__.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/structure_prediction copying build/lib.linux-i686-cpython-312/pymatgen/analysis/structure_prediction/DLS_bond_params.yaml -> build/bdist.linux-i686/wheel/./pymatgen/analysis/structure_prediction copying build/lib.linux-i686-cpython-312/pymatgen/analysis/transition_state.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis copying build/lib.linux-i686-cpython-312/pymatgen/analysis/cn_opt_params.yaml -> build/bdist.linux-i686/wheel/./pymatgen/analysis copying build/lib.linux-i686-cpython-312/pymatgen/analysis/energy_models.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis copying build/lib.linux-i686-cpython-312/pymatgen/analysis/piezo_sensitivity.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis copying build/lib.linux-i686-cpython-312/pymatgen/analysis/pourbaix_diagram.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis copying build/lib.linux-i686-cpython-312/pymatgen/analysis/vesta_cutoffs.yaml -> build/bdist.linux-i686/wheel/./pymatgen/analysis creating build/bdist.linux-i686/wheel/pymatgen/analysis/interfaces copying build/lib.linux-i686-cpython-312/pymatgen/analysis/interfaces/coherent_interfaces.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/interfaces copying build/lib.linux-i686-cpython-312/pymatgen/analysis/interfaces/substrate_analyzer.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/interfaces copying build/lib.linux-i686-cpython-312/pymatgen/analysis/interfaces/zsl.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/interfaces copying build/lib.linux-i686-cpython-312/pymatgen/analysis/interfaces/__init__.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis/interfaces copying build/lib.linux-i686-cpython-312/pymatgen/analysis/nmr.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis copying build/lib.linux-i686-cpython-312/pymatgen/analysis/thermochemistry.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis copying build/lib.linux-i686-cpython-312/pymatgen/analysis/adsorption.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis copying build/lib.linux-i686-cpython-312/pymatgen/analysis/ionic_radii.json -> build/bdist.linux-i686/wheel/./pymatgen/analysis copying build/lib.linux-i686-cpython-312/pymatgen/analysis/ewald.py -> build/bdist.linux-i686/wheel/./pymatgen/analysis creating build/bdist.linux-i686/wheel/pymatgen/cli copying build/lib.linux-i686-cpython-312/pymatgen/cli/feff_plot_dos.py -> build/bdist.linux-i686/wheel/./pymatgen/cli copying build/lib.linux-i686-cpython-312/pymatgen/cli/pmg_structure.py -> build/bdist.linux-i686/wheel/./pymatgen/cli copying build/lib.linux-i686-cpython-312/pymatgen/cli/get_environment.py -> build/bdist.linux-i686/wheel/./pymatgen/cli copying build/lib.linux-i686-cpython-312/pymatgen/cli/pmg.py -> build/bdist.linux-i686/wheel/./pymatgen/cli copying build/lib.linux-i686-cpython-312/pymatgen/cli/pmg_plot.py -> build/bdist.linux-i686/wheel/./pymatgen/cli copying build/lib.linux-i686-cpython-312/pymatgen/cli/feff_plot_cross_section.py -> build/bdist.linux-i686/wheel/./pymatgen/cli copying build/lib.linux-i686-cpython-312/pymatgen/cli/pmg_potcar.py -> build/bdist.linux-i686/wheel/./pymatgen/cli copying build/lib.linux-i686-cpython-312/pymatgen/cli/__init__.py -> build/bdist.linux-i686/wheel/./pymatgen/cli copying build/lib.linux-i686-cpython-312/pymatgen/cli/pmg_config.py -> build/bdist.linux-i686/wheel/./pymatgen/cli copying build/lib.linux-i686-cpython-312/pymatgen/cli/pmg_analyze.py -> build/bdist.linux-i686/wheel/./pymatgen/cli creating build/bdist.linux-i686/wheel/pymatgen/entries copying build/lib.linux-i686-cpython-312/pymatgen/entries/MITCompatibility.yaml -> build/bdist.linux-i686/wheel/./pymatgen/entries copying build/lib.linux-i686-cpython-312/pymatgen/entries/exp_entries.py -> build/bdist.linux-i686/wheel/./pymatgen/entries copying build/lib.linux-i686-cpython-312/pymatgen/entries/calc_compounds.json.gz -> build/bdist.linux-i686/wheel/./pymatgen/entries copying build/lib.linux-i686-cpython-312/pymatgen/entries/computed_entries.py -> build/bdist.linux-i686/wheel/./pymatgen/entries copying build/lib.linux-i686-cpython-312/pymatgen/entries/compatibility.py -> build/bdist.linux-i686/wheel/./pymatgen/entries copying build/lib.linux-i686-cpython-312/pymatgen/entries/exp_compounds.json.gz -> build/bdist.linux-i686/wheel/./pymatgen/entries copying build/lib.linux-i686-cpython-312/pymatgen/entries/correction_calculator.py -> build/bdist.linux-i686/wheel/./pymatgen/entries copying build/lib.linux-i686-cpython-312/pymatgen/entries/mixing_scheme.py -> build/bdist.linux-i686/wheel/./pymatgen/entries creating build/bdist.linux-i686/wheel/pymatgen/entries/data copying build/lib.linux-i686-cpython-312/pymatgen/entries/data/g_els.json -> build/bdist.linux-i686/wheel/./pymatgen/entries/data copying build/lib.linux-i686-cpython-312/pymatgen/entries/data/nist_gas_gf.json -> build/bdist.linux-i686/wheel/./pymatgen/entries/data copying build/lib.linux-i686-cpython-312/pymatgen/entries/MPCompatibility.yaml -> build/bdist.linux-i686/wheel/./pymatgen/entries copying build/lib.linux-i686-cpython-312/pymatgen/entries/entry_tools.py -> build/bdist.linux-i686/wheel/./pymatgen/entries copying build/lib.linux-i686-cpython-312/pymatgen/entries/__init__.py -> build/bdist.linux-i686/wheel/./pymatgen/entries copying build/lib.linux-i686-cpython-312/pymatgen/entries/MP2020Compatibility.yaml -> build/bdist.linux-i686/wheel/./pymatgen/entries creating build/bdist.linux-i686/wheel/pymatgen/transformations copying build/lib.linux-i686-cpython-312/pymatgen/transformations/site_transformations.py -> build/bdist.linux-i686/wheel/./pymatgen/transformations copying build/lib.linux-i686-cpython-312/pymatgen/transformations/transformation_abc.py -> build/bdist.linux-i686/wheel/./pymatgen/transformations copying build/lib.linux-i686-cpython-312/pymatgen/transformations/standard_transformations.py -> build/bdist.linux-i686/wheel/./pymatgen/transformations copying build/lib.linux-i686-cpython-312/pymatgen/transformations/advanced_transformations.py -> build/bdist.linux-i686/wheel/./pymatgen/transformations copying build/lib.linux-i686-cpython-312/pymatgen/transformations/__init__.py -> build/bdist.linux-i686/wheel/./pymatgen/transformations creating build/bdist.linux-i686/wheel/pymatgen/phonon copying build/lib.linux-i686-cpython-312/pymatgen/phonon/bandstructure.py -> build/bdist.linux-i686/wheel/./pymatgen/phonon copying build/lib.linux-i686-cpython-312/pymatgen/phonon/plotter.py -> build/bdist.linux-i686/wheel/./pymatgen/phonon copying build/lib.linux-i686-cpython-312/pymatgen/phonon/gruneisen.py -> build/bdist.linux-i686/wheel/./pymatgen/phonon copying build/lib.linux-i686-cpython-312/pymatgen/phonon/thermal_displacements.py -> build/bdist.linux-i686/wheel/./pymatgen/phonon copying build/lib.linux-i686-cpython-312/pymatgen/phonon/ir_spectra.py -> build/bdist.linux-i686/wheel/./pymatgen/phonon copying build/lib.linux-i686-cpython-312/pymatgen/phonon/__init__.py -> build/bdist.linux-i686/wheel/./pymatgen/phonon copying build/lib.linux-i686-cpython-312/pymatgen/phonon/dos.py -> build/bdist.linux-i686/wheel/./pymatgen/phonon creating build/bdist.linux-i686/wheel/pymatgen/vis copying build/lib.linux-i686-cpython-312/pymatgen/vis/structure_chemview.py -> build/bdist.linux-i686/wheel/./pymatgen/vis copying build/lib.linux-i686-cpython-312/pymatgen/vis/ElementColorSchemes.yaml -> build/bdist.linux-i686/wheel/./pymatgen/vis copying build/lib.linux-i686-cpython-312/pymatgen/vis/plotters.py -> build/bdist.linux-i686/wheel/./pymatgen/vis copying build/lib.linux-i686-cpython-312/pymatgen/vis/__init__.py -> build/bdist.linux-i686/wheel/./pymatgen/vis copying build/lib.linux-i686-cpython-312/pymatgen/vis/structure_vtk.py -> build/bdist.linux-i686/wheel/./pymatgen/vis creating build/bdist.linux-i686/wheel/pymatgen/optimization copying build/lib.linux-i686-cpython-312/pymatgen/optimization/neighbors.cpython-312-i386-linux-gnu.so -> build/bdist.linux-i686/wheel/./pymatgen/optimization copying build/lib.linux-i686-cpython-312/pymatgen/optimization/__init__.py -> build/bdist.linux-i686/wheel/./pymatgen/optimization copying build/lib.linux-i686-cpython-312/pymatgen/optimization/linear_assignment.cpython-312-i386-linux-gnu.so -> build/bdist.linux-i686/wheel/./pymatgen/optimization copying build/lib.linux-i686-cpython-312/pymatgen/py.typed -> build/bdist.linux-i686/wheel/./pymatgen creating build/bdist.linux-i686/wheel/pymatgen/electronic_structure copying build/lib.linux-i686-cpython-312/pymatgen/electronic_structure/cohp.py -> build/bdist.linux-i686/wheel/./pymatgen/electronic_structure copying build/lib.linux-i686-cpython-312/pymatgen/electronic_structure/bandstructure.py -> build/bdist.linux-i686/wheel/./pymatgen/electronic_structure copying build/lib.linux-i686-cpython-312/pymatgen/electronic_structure/boltztrap.py -> build/bdist.linux-i686/wheel/./pymatgen/electronic_structure copying build/lib.linux-i686-cpython-312/pymatgen/electronic_structure/plotter.py -> build/bdist.linux-i686/wheel/./pymatgen/electronic_structure copying build/lib.linux-i686-cpython-312/pymatgen/electronic_structure/core.py -> build/bdist.linux-i686/wheel/./pymatgen/electronic_structure copying build/lib.linux-i686-cpython-312/pymatgen/electronic_structure/__init__.py -> build/bdist.linux-i686/wheel/./pymatgen/electronic_structure copying build/lib.linux-i686-cpython-312/pymatgen/electronic_structure/boltztrap2.py -> build/bdist.linux-i686/wheel/./pymatgen/electronic_structure copying build/lib.linux-i686-cpython-312/pymatgen/electronic_structure/dos.py -> build/bdist.linux-i686/wheel/./pymatgen/electronic_structure creating build/bdist.linux-i686/wheel/pymatgen/util copying build/lib.linux-i686-cpython-312/pymatgen/util/plotly_interface_rxn_layouts.json -> build/bdist.linux-i686/wheel/./pymatgen/util copying build/lib.linux-i686-cpython-312/pymatgen/util/plotting.py -> build/bdist.linux-i686/wheel/./pymatgen/util copying build/lib.linux-i686-cpython-312/pymatgen/util/string.py -> build/bdist.linux-i686/wheel/./pymatgen/util copying build/lib.linux-i686-cpython-312/pymatgen/util/coord_cython.cpython-312-i386-linux-gnu.so -> build/bdist.linux-i686/wheel/./pymatgen/util creating build/bdist.linux-i686/wheel/pymatgen/util/testing copying build/lib.linux-i686-cpython-312/pymatgen/util/testing/__init__.py -> build/bdist.linux-i686/wheel/./pymatgen/util/testing copying build/lib.linux-i686-cpython-312/pymatgen/util/graph_hashing.py -> build/bdist.linux-i686/wheel/./pymatgen/util copying build/lib.linux-i686-cpython-312/pymatgen/util/joblib.py -> build/bdist.linux-i686/wheel/./pymatgen/util copying build/lib.linux-i686-cpython-312/pymatgen/util/provenance.py -> build/bdist.linux-i686/wheel/./pymatgen/util copying build/lib.linux-i686-cpython-312/pymatgen/util/numba.py -> build/bdist.linux-i686/wheel/./pymatgen/util copying build/lib.linux-i686-cpython-312/pymatgen/util/io_utils.py -> build/bdist.linux-i686/wheel/./pymatgen/util copying build/lib.linux-i686-cpython-312/pymatgen/util/coord.py -> build/bdist.linux-i686/wheel/./pymatgen/util copying build/lib.linux-i686-cpython-312/pymatgen/util/plotly_pd_layouts.json -> build/bdist.linux-i686/wheel/./pymatgen/util copying build/lib.linux-i686-cpython-312/pymatgen/util/due.py -> build/bdist.linux-i686/wheel/./pymatgen/util creating build/bdist.linux-i686/wheel/pymatgen/util/structures copying build/lib.linux-i686-cpython-312/pymatgen/util/structures/La2CoO4F.json -> build/bdist.linux-i686/wheel/./pymatgen/util/structures copying build/lib.linux-i686-cpython-312/pymatgen/util/structures/Li10GeP2S12.json -> build/bdist.linux-i686/wheel/./pymatgen/util/structures copying build/lib.linux-i686-cpython-312/pymatgen/util/structures/SiO2.json -> build/bdist.linux-i686/wheel/./pymatgen/util/structures copying build/lib.linux-i686-cpython-312/pymatgen/util/structures/Pb2TiZrO6.json -> build/bdist.linux-i686/wheel/./pymatgen/util/structures copying build/lib.linux-i686-cpython-312/pymatgen/util/structures/NaFePO4.json -> build/bdist.linux-i686/wheel/./pymatgen/util/structures copying build/lib.linux-i686-cpython-312/pymatgen/util/structures/K2O2.json -> build/bdist.linux-i686/wheel/./pymatgen/util/structures copying build/lib.linux-i686-cpython-312/pymatgen/util/structures/VO2.json -> build/bdist.linux-i686/wheel/./pymatgen/util/structures copying build/lib.linux-i686-cpython-312/pymatgen/util/structures/Li2O2.json -> build/bdist.linux-i686/wheel/./pymatgen/util/structures copying build/lib.linux-i686-cpython-312/pymatgen/util/structures/Sn.json -> build/bdist.linux-i686/wheel/./pymatgen/util/structures copying build/lib.linux-i686-cpython-312/pymatgen/util/structures/LiFePO4.json -> build/bdist.linux-i686/wheel/./pymatgen/util/structures copying build/lib.linux-i686-cpython-312/pymatgen/util/structures/SrTiO3.json -> build/bdist.linux-i686/wheel/./pymatgen/util/structures copying build/lib.linux-i686-cpython-312/pymatgen/util/structures/Li2O.json -> build/bdist.linux-i686/wheel/./pymatgen/util/structures copying build/lib.linux-i686-cpython-312/pymatgen/util/structures/Li3V2(PO4)3.json -> build/bdist.linux-i686/wheel/./pymatgen/util/structures copying build/lib.linux-i686-cpython-312/pymatgen/util/structures/Si.json -> build/bdist.linux-i686/wheel/./pymatgen/util/structures copying build/lib.linux-i686-cpython-312/pymatgen/util/structures/BaNiO3.json -> build/bdist.linux-i686/wheel/./pymatgen/util/structures copying build/lib.linux-i686-cpython-312/pymatgen/util/structures/TlBiSe2.json -> build/bdist.linux-i686/wheel/./pymatgen/util/structures copying build/lib.linux-i686-cpython-312/pymatgen/util/structures/CsCl.json -> build/bdist.linux-i686/wheel/./pymatgen/util/structures copying build/lib.linux-i686-cpython-312/pymatgen/util/structures/TiO2.json -> build/bdist.linux-i686/wheel/./pymatgen/util/structures copying build/lib.linux-i686-cpython-312/pymatgen/util/structures/He_BCC.json -> build/bdist.linux-i686/wheel/./pymatgen/util/structures copying build/lib.linux-i686-cpython-312/pymatgen/util/structures/Graphite.json -> build/bdist.linux-i686/wheel/./pymatgen/util/structures copying build/lib.linux-i686-cpython-312/pymatgen/util/structures/Si_SiO2_Interface.json -> build/bdist.linux-i686/wheel/./pymatgen/util/structures copying build/lib.linux-i686-cpython-312/pymatgen/util/__init__.py -> build/bdist.linux-i686/wheel/./pymatgen/util copying build/lib.linux-i686-cpython-312/pymatgen/util/typing.py -> build/bdist.linux-i686/wheel/./pymatgen/util copying build/lib.linux-i686-cpython-312/pymatgen/util/misc.py -> build/bdist.linux-i686/wheel/./pymatgen/util copying build/lib.linux-i686-cpython-312/pymatgen/util/num.py -> build/bdist.linux-i686/wheel/./pymatgen/util copying build/lib.linux-i686-cpython-312/pymatgen/util/plotly_chempot_layouts.json -> build/bdist.linux-i686/wheel/./pymatgen/util creating build/bdist.linux-i686/wheel/pymatgen/symmetry copying build/lib.linux-i686-cpython-312/pymatgen/symmetry/bandstructure.py -> build/bdist.linux-i686/wheel/./pymatgen/symmetry copying build/lib.linux-i686-cpython-312/pymatgen/symmetry/kpath.py -> build/bdist.linux-i686/wheel/./pymatgen/symmetry copying build/lib.linux-i686-cpython-312/pymatgen/symmetry/symm_data.json -> build/bdist.linux-i686/wheel/./pymatgen/symmetry copying build/lib.linux-i686-cpython-312/pymatgen/symmetry/symm_data_magnetic.sqlite -> build/bdist.linux-i686/wheel/./pymatgen/symmetry copying build/lib.linux-i686-cpython-312/pymatgen/symmetry/site_symmetries.py -> build/bdist.linux-i686/wheel/./pymatgen/symmetry copying build/lib.linux-i686-cpython-312/pymatgen/symmetry/symm_ops.yaml -> build/bdist.linux-i686/wheel/./pymatgen/symmetry copying build/lib.linux-i686-cpython-312/pymatgen/symmetry/symm_data.yaml -> build/bdist.linux-i686/wheel/./pymatgen/symmetry copying build/lib.linux-i686-cpython-312/pymatgen/symmetry/settings.py -> build/bdist.linux-i686/wheel/./pymatgen/symmetry copying build/lib.linux-i686-cpython-312/pymatgen/symmetry/analyzer.py -> build/bdist.linux-i686/wheel/./pymatgen/symmetry copying build/lib.linux-i686-cpython-312/pymatgen/symmetry/__init__.py -> build/bdist.linux-i686/wheel/./pymatgen/symmetry copying build/lib.linux-i686-cpython-312/pymatgen/symmetry/groups.py -> build/bdist.linux-i686/wheel/./pymatgen/symmetry copying build/lib.linux-i686-cpython-312/pymatgen/symmetry/maggroups.py -> build/bdist.linux-i686/wheel/./pymatgen/symmetry copying build/lib.linux-i686-cpython-312/pymatgen/symmetry/structure.py -> build/bdist.linux-i686/wheel/./pymatgen/symmetry copying build/lib.linux-i686-cpython-312/pymatgen/symmetry/symm_ops.json -> build/bdist.linux-i686/wheel/./pymatgen/symmetry creating build/bdist.linux-i686/wheel/pymatgen/ext copying build/lib.linux-i686-cpython-312/pymatgen/ext/matproj.py -> build/bdist.linux-i686/wheel/./pymatgen/ext copying build/lib.linux-i686-cpython-312/pymatgen/ext/matproj_legacy.py -> build/bdist.linux-i686/wheel/./pymatgen/ext copying build/lib.linux-i686-cpython-312/pymatgen/ext/cod.py -> build/bdist.linux-i686/wheel/./pymatgen/ext copying build/lib.linux-i686-cpython-312/pymatgen/ext/optimade.py -> build/bdist.linux-i686/wheel/./pymatgen/ext creating build/bdist.linux-i686/wheel/pymatgen/io copying build/lib.linux-i686-cpython-312/pymatgen/io/jarvis.py -> build/bdist.linux-i686/wheel/./pymatgen/io creating build/bdist.linux-i686/wheel/pymatgen/io/lobster copying build/lib.linux-i686-cpython-312/pymatgen/io/lobster/outputs.py -> build/bdist.linux-i686/wheel/./pymatgen/io/lobster copying build/lib.linux-i686-cpython-312/pymatgen/io/lobster/inputs.py -> build/bdist.linux-i686/wheel/./pymatgen/io/lobster creating build/bdist.linux-i686/wheel/pymatgen/io/lobster/lobster_basis copying build/lib.linux-i686-cpython-312/pymatgen/io/lobster/lobster_basis/BASIS_PBE_54_min.yaml -> build/bdist.linux-i686/wheel/./pymatgen/io/lobster/lobster_basis copying build/lib.linux-i686-cpython-312/pymatgen/io/lobster/lobster_basis/BASIS_PBE_54_standard.yaml -> build/bdist.linux-i686/wheel/./pymatgen/io/lobster/lobster_basis copying build/lib.linux-i686-cpython-312/pymatgen/io/lobster/lobster_basis/BASIS_PBE_54_max.yaml -> build/bdist.linux-i686/wheel/./pymatgen/io/lobster/lobster_basis copying build/lib.linux-i686-cpython-312/pymatgen/io/lobster/__init__.py -> build/bdist.linux-i686/wheel/./pymatgen/io/lobster copying build/lib.linux-i686-cpython-312/pymatgen/io/lobster/lobsterenv.py -> build/bdist.linux-i686/wheel/./pymatgen/io/lobster creating build/bdist.linux-i686/wheel/pymatgen/io/cp2k copying build/lib.linux-i686-cpython-312/pymatgen/io/cp2k/outputs.py -> build/bdist.linux-i686/wheel/./pymatgen/io/cp2k copying build/lib.linux-i686-cpython-312/pymatgen/io/cp2k/utils.py -> build/bdist.linux-i686/wheel/./pymatgen/io/cp2k copying build/lib.linux-i686-cpython-312/pymatgen/io/cp2k/inputs.py -> build/bdist.linux-i686/wheel/./pymatgen/io/cp2k copying build/lib.linux-i686-cpython-312/pymatgen/io/cp2k/__init__.py -> build/bdist.linux-i686/wheel/./pymatgen/io/cp2k copying build/lib.linux-i686-cpython-312/pymatgen/io/cp2k/sets.py -> build/bdist.linux-i686/wheel/./pymatgen/io/cp2k copying build/lib.linux-i686-cpython-312/pymatgen/io/shengbte.py -> build/bdist.linux-i686/wheel/./pymatgen/io copying build/lib.linux-i686-cpython-312/pymatgen/io/zeopp.py -> build/bdist.linux-i686/wheel/./pymatgen/io creating build/bdist.linux-i686/wheel/pymatgen/io/vasp copying build/lib.linux-i686-cpython-312/pymatgen/io/vasp/optics.py -> build/bdist.linux-i686/wheel/./pymatgen/io/vasp copying build/lib.linux-i686-cpython-312/pymatgen/io/vasp/MPSCANRelaxSet.yaml -> build/bdist.linux-i686/wheel/./pymatgen/io/vasp copying build/lib.linux-i686-cpython-312/pymatgen/io/vasp/vasp_potcar_pymatgen_hashes.json -> build/bdist.linux-i686/wheel/./pymatgen/io/vasp copying build/lib.linux-i686-cpython-312/pymatgen/io/vasp/outputs.py -> build/bdist.linux-i686/wheel/./pymatgen/io/vasp copying build/lib.linux-i686-cpython-312/pymatgen/io/vasp/MPHSERelaxSet.yaml -> build/bdist.linux-i686/wheel/./pymatgen/io/vasp copying build/lib.linux-i686-cpython-312/pymatgen/io/vasp/incar_parameters.json -> build/bdist.linux-i686/wheel/./pymatgen/io/vasp copying build/lib.linux-i686-cpython-312/pymatgen/io/vasp/MVLRelax52Set.yaml -> build/bdist.linux-i686/wheel/./pymatgen/io/vasp copying build/lib.linux-i686-cpython-312/pymatgen/io/vasp/MVLGWSet.yaml -> build/bdist.linux-i686/wheel/./pymatgen/io/vasp copying build/lib.linux-i686-cpython-312/pymatgen/io/vasp/inputs.py -> build/bdist.linux-i686/wheel/./pymatgen/io/vasp copying build/lib.linux-i686-cpython-312/pymatgen/io/vasp/MITRelaxSet.yaml -> build/bdist.linux-i686/wheel/./pymatgen/io/vasp copying build/lib.linux-i686-cpython-312/pymatgen/io/vasp/MPAbsorptionSet.yaml -> build/bdist.linux-i686/wheel/./pymatgen/io/vasp copying build/lib.linux-i686-cpython-312/pymatgen/io/vasp/potcar-summary-stats.json.bz2 -> build/bdist.linux-i686/wheel/./pymatgen/io/vasp copying build/lib.linux-i686-cpython-312/pymatgen/io/vasp/PBE64Base.yaml -> build/bdist.linux-i686/wheel/./pymatgen/io/vasp copying build/lib.linux-i686-cpython-312/pymatgen/io/vasp/MatPESStaticSet.yaml -> build/bdist.linux-i686/wheel/./pymatgen/io/vasp copying build/lib.linux-i686-cpython-312/pymatgen/io/vasp/__init__.py -> build/bdist.linux-i686/wheel/./pymatgen/io/vasp copying build/lib.linux-i686-cpython-312/pymatgen/io/vasp/help.py -> build/bdist.linux-i686/wheel/./pymatgen/io/vasp copying build/lib.linux-i686-cpython-312/pymatgen/io/vasp/MPRelaxSet.yaml -> build/bdist.linux-i686/wheel/./pymatgen/io/vasp copying build/lib.linux-i686-cpython-312/pymatgen/io/vasp/vdW_parameters.yaml -> build/bdist.linux-i686/wheel/./pymatgen/io/vasp copying build/lib.linux-i686-cpython-312/pymatgen/io/vasp/PBE54Base.yaml -> build/bdist.linux-i686/wheel/./pymatgen/io/vasp copying build/lib.linux-i686-cpython-312/pymatgen/io/vasp/sets.py -> build/bdist.linux-i686/wheel/./pymatgen/io/vasp copying build/lib.linux-i686-cpython-312/pymatgen/io/vasp/VASPIncarBase.yaml -> build/bdist.linux-i686/wheel/./pymatgen/io/vasp copying build/lib.linux-i686-cpython-312/pymatgen/io/vasp/vasp_potcar_file_hashes.json -> build/bdist.linux-i686/wheel/./pymatgen/io/vasp copying build/lib.linux-i686-cpython-312/pymatgen/io/xcrysden.py -> build/bdist.linux-i686/wheel/./pymatgen/io copying build/lib.linux-i686-cpython-312/pymatgen/io/lmto.py -> build/bdist.linux-i686/wheel/./pymatgen/io creating build/bdist.linux-i686/wheel/pymatgen/io/xtb copying build/lib.linux-i686-cpython-312/pymatgen/io/xtb/outputs.py -> build/bdist.linux-i686/wheel/./pymatgen/io/xtb copying build/lib.linux-i686-cpython-312/pymatgen/io/xtb/inputs.py -> build/bdist.linux-i686/wheel/./pymatgen/io/xtb copying build/lib.linux-i686-cpython-312/pymatgen/io/xtb/__init__.py -> build/bdist.linux-i686/wheel/./pymatgen/io/xtb copying build/lib.linux-i686-cpython-312/pymatgen/io/res.py -> build/bdist.linux-i686/wheel/./pymatgen/io copying build/lib.linux-i686-cpython-312/pymatgen/io/cssr.py -> build/bdist.linux-i686/wheel/./pymatgen/io copying build/lib.linux-i686-cpython-312/pymatgen/io/core.py -> build/bdist.linux-i686/wheel/./pymatgen/io copying build/lib.linux-i686-cpython-312/pymatgen/io/prismatic.py -> build/bdist.linux-i686/wheel/./pymatgen/io copying build/lib.linux-i686-cpython-312/pymatgen/io/template.py -> build/bdist.linux-i686/wheel/./pymatgen/io creating build/bdist.linux-i686/wheel/pymatgen/io/feff copying build/lib.linux-i686-cpython-312/pymatgen/io/feff/outputs.py -> build/bdist.linux-i686/wheel/./pymatgen/io/feff copying build/lib.linux-i686-cpython-312/pymatgen/io/feff/MPELNESSet.yaml -> build/bdist.linux-i686/wheel/./pymatgen/io/feff copying build/lib.linux-i686-cpython-312/pymatgen/io/feff/inputs.py -> build/bdist.linux-i686/wheel/./pymatgen/io/feff copying build/lib.linux-i686-cpython-312/pymatgen/io/feff/MPEXAFSSet.yaml -> build/bdist.linux-i686/wheel/./pymatgen/io/feff copying build/lib.linux-i686-cpython-312/pymatgen/io/feff/__init__.py -> build/bdist.linux-i686/wheel/./pymatgen/io/feff copying build/lib.linux-i686-cpython-312/pymatgen/io/feff/MPXANESSet.yaml -> build/bdist.linux-i686/wheel/./pymatgen/io/feff copying build/lib.linux-i686-cpython-312/pymatgen/io/feff/MPEXELFSSet.yaml -> build/bdist.linux-i686/wheel/./pymatgen/io/feff copying build/lib.linux-i686-cpython-312/pymatgen/io/feff/sets.py -> build/bdist.linux-i686/wheel/./pymatgen/io/feff copying build/lib.linux-i686-cpython-312/pymatgen/io/phonopy.py -> build/bdist.linux-i686/wheel/./pymatgen/io copying build/lib.linux-i686-cpython-312/pymatgen/io/nwchem.py -> build/bdist.linux-i686/wheel/./pymatgen/io creating build/bdist.linux-i686/wheel/pymatgen/io/lammps copying build/lib.linux-i686-cpython-312/pymatgen/io/lammps/CoeffsDataType.yaml -> build/bdist.linux-i686/wheel/./pymatgen/io/lammps copying build/lib.linux-i686-cpython-312/pymatgen/io/lammps/outputs.py -> build/bdist.linux-i686/wheel/./pymatgen/io/lammps copying build/lib.linux-i686-cpython-312/pymatgen/io/lammps/utils.py -> build/bdist.linux-i686/wheel/./pymatgen/io/lammps copying build/lib.linux-i686-cpython-312/pymatgen/io/lammps/inputs.py -> build/bdist.linux-i686/wheel/./pymatgen/io/lammps creating build/bdist.linux-i686/wheel/pymatgen/io/lammps/templates copying build/lib.linux-i686-cpython-312/pymatgen/io/lammps/templates/msd.template -> build/bdist.linux-i686/wheel/./pymatgen/io/lammps/templates copying build/lib.linux-i686-cpython-312/pymatgen/io/lammps/templates/minimization.template -> build/bdist.linux-i686/wheel/./pymatgen/io/lammps/templates copying build/lib.linux-i686-cpython-312/pymatgen/io/lammps/templates/md.template -> build/bdist.linux-i686/wheel/./pymatgen/io/lammps/templates copying build/lib.linux-i686-cpython-312/pymatgen/io/lammps/templates/thermalization.template -> build/bdist.linux-i686/wheel/./pymatgen/io/lammps/templates copying build/lib.linux-i686-cpython-312/pymatgen/io/lammps/generators.py -> build/bdist.linux-i686/wheel/./pymatgen/io/lammps copying build/lib.linux-i686-cpython-312/pymatgen/io/lammps/__init__.py -> build/bdist.linux-i686/wheel/./pymatgen/io/lammps copying build/lib.linux-i686-cpython-312/pymatgen/io/lammps/data.py -> build/bdist.linux-i686/wheel/./pymatgen/io/lammps copying build/lib.linux-i686-cpython-312/pymatgen/io/lammps/sets.py -> build/bdist.linux-i686/wheel/./pymatgen/io/lammps copying build/lib.linux-i686-cpython-312/pymatgen/io/babel.py -> build/bdist.linux-i686/wheel/./pymatgen/io copying build/lib.linux-i686-cpython-312/pymatgen/io/xyz.py -> build/bdist.linux-i686/wheel/./pymatgen/io creating build/bdist.linux-i686/wheel/pymatgen/io/qchem copying build/lib.linux-i686-cpython-312/pymatgen/io/qchem/outputs.py -> build/bdist.linux-i686/wheel/./pymatgen/io/qchem copying build/lib.linux-i686-cpython-312/pymatgen/io/qchem/utils.py -> build/bdist.linux-i686/wheel/./pymatgen/io/qchem copying build/lib.linux-i686-cpython-312/pymatgen/io/qchem/inputs.py -> build/bdist.linux-i686/wheel/./pymatgen/io/qchem copying build/lib.linux-i686-cpython-312/pymatgen/io/qchem/__init__.py -> build/bdist.linux-i686/wheel/./pymatgen/io/qchem copying build/lib.linux-i686-cpython-312/pymatgen/io/qchem/sets.py -> build/bdist.linux-i686/wheel/./pymatgen/io/qchem copying build/lib.linux-i686-cpython-312/pymatgen/io/xr.py -> build/bdist.linux-i686/wheel/./pymatgen/io copying build/lib.linux-i686-cpython-312/pymatgen/io/atat.py -> build/bdist.linux-i686/wheel/./pymatgen/io copying build/lib.linux-i686-cpython-312/pymatgen/io/pwscf.py -> build/bdist.linux-i686/wheel/./pymatgen/io copying build/lib.linux-i686-cpython-312/pymatgen/io/fiesta.py -> build/bdist.linux-i686/wheel/./pymatgen/io copying build/lib.linux-i686-cpython-312/pymatgen/io/wannier90.py -> build/bdist.linux-i686/wheel/./pymatgen/io copying build/lib.linux-i686-cpython-312/pymatgen/io/packmol.py -> build/bdist.linux-i686/wheel/./pymatgen/io copying build/lib.linux-i686-cpython-312/pymatgen/io/gaussian.py -> build/bdist.linux-i686/wheel/./pymatgen/io creating build/bdist.linux-i686/wheel/pymatgen/io/aims creating build/bdist.linux-i686/wheel/pymatgen/io/aims/sets copying build/lib.linux-i686-cpython-312/pymatgen/io/aims/sets/magnetism.py -> build/bdist.linux-i686/wheel/./pymatgen/io/aims/sets copying build/lib.linux-i686-cpython-312/pymatgen/io/aims/sets/core.py -> build/bdist.linux-i686/wheel/./pymatgen/io/aims/sets copying build/lib.linux-i686-cpython-312/pymatgen/io/aims/sets/base.py -> build/bdist.linux-i686/wheel/./pymatgen/io/aims/sets copying build/lib.linux-i686-cpython-312/pymatgen/io/aims/sets/__init__.py -> build/bdist.linux-i686/wheel/./pymatgen/io/aims/sets copying build/lib.linux-i686-cpython-312/pymatgen/io/aims/sets/bs.py -> build/bdist.linux-i686/wheel/./pymatgen/io/aims/sets copying build/lib.linux-i686-cpython-312/pymatgen/io/aims/outputs.py -> build/bdist.linux-i686/wheel/./pymatgen/io/aims copying build/lib.linux-i686-cpython-312/pymatgen/io/aims/inputs.py -> build/bdist.linux-i686/wheel/./pymatgen/io/aims copying build/lib.linux-i686-cpython-312/pymatgen/io/aims/__init__.py -> build/bdist.linux-i686/wheel/./pymatgen/io/aims copying build/lib.linux-i686-cpython-312/pymatgen/io/aims/parsers.py -> build/bdist.linux-i686/wheel/./pymatgen/io/aims creating build/bdist.linux-i686/wheel/pymatgen/io/abinit copying build/lib.linux-i686-cpython-312/pymatgen/io/abinit/abiobjects.py -> build/bdist.linux-i686/wheel/./pymatgen/io/abinit copying build/lib.linux-i686-cpython-312/pymatgen/io/abinit/variable.py -> build/bdist.linux-i686/wheel/./pymatgen/io/abinit copying build/lib.linux-i686-cpython-312/pymatgen/io/abinit/inputs.py -> build/bdist.linux-i686/wheel/./pymatgen/io/abinit copying build/lib.linux-i686-cpython-312/pymatgen/io/abinit/netcdf.py -> build/bdist.linux-i686/wheel/./pymatgen/io/abinit copying build/lib.linux-i686-cpython-312/pymatgen/io/abinit/__init__.py -> build/bdist.linux-i686/wheel/./pymatgen/io/abinit copying build/lib.linux-i686-cpython-312/pymatgen/io/abinit/pseudos.py -> build/bdist.linux-i686/wheel/./pymatgen/io/abinit copying build/lib.linux-i686-cpython-312/pymatgen/io/abinit/abitimer.py -> build/bdist.linux-i686/wheel/./pymatgen/io/abinit creating build/bdist.linux-i686/wheel/pymatgen/io/exciting copying build/lib.linux-i686-cpython-312/pymatgen/io/exciting/inputs.py -> build/bdist.linux-i686/wheel/./pymatgen/io/exciting copying build/lib.linux-i686-cpython-312/pymatgen/io/exciting/__init__.py -> build/bdist.linux-i686/wheel/./pymatgen/io/exciting copying build/lib.linux-i686-cpython-312/pymatgen/io/cif.py -> build/bdist.linux-i686/wheel/./pymatgen/io copying build/lib.linux-i686-cpython-312/pymatgen/io/openff.py -> build/bdist.linux-i686/wheel/./pymatgen/io creating build/bdist.linux-i686/wheel/pymatgen/io/pwmat copying build/lib.linux-i686-cpython-312/pymatgen/io/pwmat/outputs.py -> build/bdist.linux-i686/wheel/./pymatgen/io/pwmat copying build/lib.linux-i686-cpython-312/pymatgen/io/pwmat/inputs.py -> build/bdist.linux-i686/wheel/./pymatgen/io/pwmat copying build/lib.linux-i686-cpython-312/pymatgen/io/pwmat/__init__.py -> build/bdist.linux-i686/wheel/./pymatgen/io/pwmat copying build/lib.linux-i686-cpython-312/pymatgen/io/ase.py -> build/bdist.linux-i686/wheel/./pymatgen/io copying build/lib.linux-i686-cpython-312/pymatgen/io/optimade.py -> build/bdist.linux-i686/wheel/./pymatgen/io copying build/lib.linux-i686-cpython-312/pymatgen/io/multiwfn.py -> build/bdist.linux-i686/wheel/./pymatgen/io copying build/lib.linux-i686-cpython-312/pymatgen/io/common.py -> build/bdist.linux-i686/wheel/./pymatgen/io copying build/lib.linux-i686-cpython-312/pymatgen/io/adf.py -> build/bdist.linux-i686/wheel/./pymatgen/io copying build/lib.linux-i686-cpython-312/pymatgen/io/icet.py -> build/bdist.linux-i686/wheel/./pymatgen/io copying build/lib.linux-i686-cpython-312/pymatgen/dao.py -> build/bdist.linux-i686/wheel/./pymatgen running install_egg_info running egg_info creating src/pymatgen.egg-info writing src/pymatgen.egg-info/PKG-INFO /usr/lib/python3/dist-packages/setuptools/_core_metadata.py:161: SetuptoolsDeprecationWarning: Invalid config. !! ******************************************************************************** newlines are not allowed in `summary` and will break in the future ******************************************************************************** !! write_field('Summary', single_line(summary)) writing dependency_links to src/pymatgen.egg-info/dependency_links.txt writing entry points to src/pymatgen.egg-info/entry_points.txt writing requirements to src/pymatgen.egg-info/requires.txt writing top-level names to src/pymatgen.egg-info/top_level.txt writing manifest file 'src/pymatgen.egg-info/SOURCES.txt' reading manifest file 'src/pymatgen.egg-info/SOURCES.txt' adding license file 'LICENSE' writing manifest file 'src/pymatgen.egg-info/SOURCES.txt' Copying src/pymatgen.egg-info to build/bdist.linux-i686/wheel/./pymatgen-2024.10.29.egg-info running install_scripts creating build/bdist.linux-i686/wheel/pymatgen-2024.10.29.dist-info/WHEEL creating '/build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/.tmp-qfsrs76z/pymatgen-2024.10.29-cp312-cp312-linux_i686.whl' and adding 'build/bdist.linux-i686/wheel' to it adding 'pymatgen/dao.py' adding 'pymatgen/py.typed' adding 'pymatgen/alchemy/__init__.py' adding 'pymatgen/alchemy/filters.py' adding 'pymatgen/alchemy/materials.py' adding 'pymatgen/alchemy/transmuters.py' adding 'pymatgen/analysis/adsorption.py' adding 'pymatgen/analysis/aflow_prototypes.json' adding 'pymatgen/analysis/atomic_subshell_photoionization_cross_sections.csv' adding 'pymatgen/analysis/bond_dissociation.py' adding 'pymatgen/analysis/bond_valence.py' adding 'pymatgen/analysis/bonds_jmol_ob.yaml' adding 'pymatgen/analysis/bvparam_1991.yaml' adding 'pymatgen/analysis/chempot_diagram.py' adding 'pymatgen/analysis/cn_opt_params.yaml' adding 'pymatgen/analysis/cost.py' adding 'pymatgen/analysis/costdb_elements.csv' adding 'pymatgen/analysis/dimensionality.py' adding 'pymatgen/analysis/disorder.py' adding 'pymatgen/analysis/energy_models.py' adding 'pymatgen/analysis/eos.py' adding 'pymatgen/analysis/ewald.py' adding 'pymatgen/analysis/excitation.py' adding 'pymatgen/analysis/fragmenter.py' adding 'pymatgen/analysis/functional_groups.py' adding 'pymatgen/analysis/graphs.py' adding 'pymatgen/analysis/hhi.py' adding 'pymatgen/analysis/hhi_data.csv' adding 'pymatgen/analysis/icsd_bv.yaml' adding 'pymatgen/analysis/interface_reactions.py' adding 'pymatgen/analysis/ionic_radii.json' adding 'pymatgen/analysis/local_env.py' adding 'pymatgen/analysis/molecule_matcher.py' adding 'pymatgen/analysis/molecule_structure_comparator.py' adding 'pymatgen/analysis/nmr.py' adding 'pymatgen/analysis/op_params.yaml' adding 'pymatgen/analysis/phase_diagram.py' adding 'pymatgen/analysis/piezo.py' adding 'pymatgen/analysis/piezo_sensitivity.py' adding 'pymatgen/analysis/pourbaix_diagram.py' adding 'pymatgen/analysis/prototypes.py' adding 'pymatgen/analysis/quasiharmonic.py' adding 'pymatgen/analysis/quasirrho.py' adding 'pymatgen/analysis/reaction_calculator.py' adding 'pymatgen/analysis/structure_analyzer.py' adding 'pymatgen/analysis/structure_matcher.py' adding 'pymatgen/analysis/surface_analysis.py' adding 'pymatgen/analysis/thermochemistry.py' adding 'pymatgen/analysis/transition_state.py' adding 'pymatgen/analysis/vesta_cutoffs.yaml' adding 'pymatgen/analysis/wulff.py' adding 'pymatgen/analysis/xps.py' adding 'pymatgen/analysis/chemenv/__init__.py' adding 'pymatgen/analysis/chemenv/connectivity/__init__.py' adding 'pymatgen/analysis/chemenv/connectivity/connected_components.py' adding 'pymatgen/analysis/chemenv/connectivity/connectivity_finder.py' adding 'pymatgen/analysis/chemenv/connectivity/environment_nodes.py' adding 'pymatgen/analysis/chemenv/connectivity/structure_connectivity.py' adding 'pymatgen/analysis/chemenv/coordination_environments/__init__.py' adding 'pymatgen/analysis/chemenv/coordination_environments/chemenv_strategies.py' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries.py' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometry_finder.py' adding 'pymatgen/analysis/chemenv/coordination_environments/structure_environments.py' adding 'pymatgen/analysis/chemenv/coordination_environments/voronoi.py' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/A#2.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/AC#12.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/BO_1#8.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/BO_2#8.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/BO_3#8.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/BS_1#10.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/BS_2#10.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/C#12.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/C#8.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/CO#11.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/DD#20.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/DD#8.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/DDPN#8.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/DI#11.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/ET#7.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/FO#7.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/H#10.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/H#11.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/HA#12.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/HB#8.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/HD#9.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/HP#12.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/I#12.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/L#2.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/MI#10.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/O#6.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/O#6_explicit.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/PA#10.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/PB#7.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/PBP#12.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/PCPA#11.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/PP#10.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/PP#5.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/PP#6.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/S#1.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/S#10.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/S#12.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/S#4.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/S#5.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SA#8.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SBSA#10.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SBT#8.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SC#12.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SH#11.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SH#13.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SMA#9.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SS#4.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SS#9.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/ST#7.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/SY#4.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/T#4.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/T#5.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/T#6.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TBSA#10.json' adding 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'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TT_1#9.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TT_2#9.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TT_3#9.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/TY#3.json' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/__init__.py' adding 'pymatgen/analysis/chemenv/coordination_environments/coordination_geometries_files/allcg.txt' adding 'pymatgen/analysis/chemenv/utils/__init__.py' adding 'pymatgen/analysis/chemenv/utils/chemenv_config.py' adding 'pymatgen/analysis/chemenv/utils/chemenv_errors.py' adding 'pymatgen/analysis/chemenv/utils/coordination_geometry_utils.py' adding 'pymatgen/analysis/chemenv/utils/defs_utils.py' adding 'pymatgen/analysis/chemenv/utils/func_utils.py' adding 'pymatgen/analysis/chemenv/utils/graph_utils.py' adding 'pymatgen/analysis/chemenv/utils/math_utils.py' adding 'pymatgen/analysis/chemenv/utils/scripts_utils.py' adding 'pymatgen/analysis/diffraction/__init__.py' adding 'pymatgen/analysis/diffraction/atomic_scattering_params.json' adding 'pymatgen/analysis/diffraction/core.py' adding 'pymatgen/analysis/diffraction/neutron.py' adding 'pymatgen/analysis/diffraction/neutron_scattering_length.json' adding 'pymatgen/analysis/diffraction/tem.py' adding 'pymatgen/analysis/diffraction/xrd.py' adding 'pymatgen/analysis/elasticity/__init__.py' adding 'pymatgen/analysis/elasticity/elastic.py' adding 'pymatgen/analysis/elasticity/strain.py' adding 'pymatgen/analysis/elasticity/stress.py' adding 'pymatgen/analysis/ferroelectricity/__init__.py' adding 'pymatgen/analysis/ferroelectricity/polarization.py' adding 'pymatgen/analysis/gb/__init__.py' adding 'pymatgen/analysis/gb/grain.py' adding 'pymatgen/analysis/interfaces/__init__.py' adding 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'pymatgen/cli/pmg_config.py' adding 'pymatgen/cli/pmg_plot.py' adding 'pymatgen/cli/pmg_potcar.py' adding 'pymatgen/cli/pmg_structure.py' adding 'pymatgen/command_line/OxideTersoffPotentials' adding 'pymatgen/command_line/__init__.py' adding 'pymatgen/command_line/bader_caller.py' adding 'pymatgen/command_line/bush.lib' adding 'pymatgen/command_line/chargemol_caller.py' adding 'pymatgen/command_line/critic2_caller.py' adding 'pymatgen/command_line/enumlib_caller.py' adding 'pymatgen/command_line/gulp_caller.py' adding 'pymatgen/command_line/lewis.lib' adding 'pymatgen/command_line/mcsqs_caller.py' adding 'pymatgen/command_line/vampire_caller.py' adding 'pymatgen/core/__init__.py' adding 'pymatgen/core/bond_lengths.json' adding 'pymatgen/core/bonds.py' adding 'pymatgen/core/composition.py' adding 'pymatgen/core/func_groups.json' adding 'pymatgen/core/interface.py' adding 'pymatgen/core/ion.py' adding 'pymatgen/core/lattice.py' adding 'pymatgen/core/libxc_docs.json' adding 'pymatgen/core/libxcfunc.py' adding 'pymatgen/core/molecular_orbitals.py' adding 'pymatgen/core/operations.py' adding 'pymatgen/core/periodic_table.json' adding 'pymatgen/core/periodic_table.py' adding 'pymatgen/core/quad_data.json' adding 'pymatgen/core/reconstructions_archive.json' adding 'pymatgen/core/sites.py' adding 'pymatgen/core/spectrum.py' adding 'pymatgen/core/structure.py' adding 'pymatgen/core/surface.py' adding 'pymatgen/core/tensors.py' adding 'pymatgen/core/trajectory.py' adding 'pymatgen/core/units.py' adding 'pymatgen/core/xcfunc.py' adding 'pymatgen/electronic_structure/__init__.py' adding 'pymatgen/electronic_structure/bandstructure.py' adding 'pymatgen/electronic_structure/boltztrap.py' adding 'pymatgen/electronic_structure/boltztrap2.py' adding 'pymatgen/electronic_structure/cohp.py' adding 'pymatgen/electronic_structure/core.py' adding 'pymatgen/electronic_structure/dos.py' adding 'pymatgen/electronic_structure/plotter.py' adding 'pymatgen/entries/MITCompatibility.yaml' adding 'pymatgen/entries/MP2020Compatibility.yaml' adding 'pymatgen/entries/MPCompatibility.yaml' adding 'pymatgen/entries/__init__.py' adding 'pymatgen/entries/calc_compounds.json.gz' adding 'pymatgen/entries/compatibility.py' adding 'pymatgen/entries/computed_entries.py' adding 'pymatgen/entries/correction_calculator.py' adding 'pymatgen/entries/entry_tools.py' adding 'pymatgen/entries/exp_compounds.json.gz' adding 'pymatgen/entries/exp_entries.py' adding 'pymatgen/entries/mixing_scheme.py' adding 'pymatgen/entries/data/g_els.json' adding 'pymatgen/entries/data/nist_gas_gf.json' adding 'pymatgen/ext/cod.py' adding 'pymatgen/ext/matproj.py' adding 'pymatgen/ext/matproj_legacy.py' adding 'pymatgen/ext/optimade.py' adding 'pymatgen/io/adf.py' adding 'pymatgen/io/ase.py' adding 'pymatgen/io/atat.py' adding 'pymatgen/io/babel.py' adding 'pymatgen/io/cif.py' adding 'pymatgen/io/common.py' adding 'pymatgen/io/core.py' adding 'pymatgen/io/cssr.py' adding 'pymatgen/io/fiesta.py' adding 'pymatgen/io/gaussian.py' adding 'pymatgen/io/icet.py' adding 'pymatgen/io/jarvis.py' adding 'pymatgen/io/lmto.py' adding 'pymatgen/io/multiwfn.py' adding 'pymatgen/io/nwchem.py' adding 'pymatgen/io/openff.py' adding 'pymatgen/io/optimade.py' adding 'pymatgen/io/packmol.py' adding 'pymatgen/io/phonopy.py' adding 'pymatgen/io/prismatic.py' adding 'pymatgen/io/pwscf.py' adding 'pymatgen/io/res.py' adding 'pymatgen/io/shengbte.py' adding 'pymatgen/io/template.py' adding 'pymatgen/io/wannier90.py' adding 'pymatgen/io/xcrysden.py' adding 'pymatgen/io/xr.py' adding 'pymatgen/io/xyz.py' adding 'pymatgen/io/zeopp.py' adding 'pymatgen/io/abinit/__init__.py' adding 'pymatgen/io/abinit/abiobjects.py' adding 'pymatgen/io/abinit/abitimer.py' adding 'pymatgen/io/abinit/inputs.py' adding 'pymatgen/io/abinit/netcdf.py' adding 'pymatgen/io/abinit/pseudos.py' adding 'pymatgen/io/abinit/variable.py' adding 'pymatgen/io/aims/__init__.py' adding 'pymatgen/io/aims/inputs.py' adding 'pymatgen/io/aims/outputs.py' adding 'pymatgen/io/aims/parsers.py' adding 'pymatgen/io/aims/sets/__init__.py' adding 'pymatgen/io/aims/sets/base.py' adding 'pymatgen/io/aims/sets/bs.py' adding 'pymatgen/io/aims/sets/core.py' adding 'pymatgen/io/aims/sets/magnetism.py' adding 'pymatgen/io/cp2k/__init__.py' adding 'pymatgen/io/cp2k/inputs.py' adding 'pymatgen/io/cp2k/outputs.py' adding 'pymatgen/io/cp2k/sets.py' adding 'pymatgen/io/cp2k/utils.py' adding 'pymatgen/io/exciting/__init__.py' adding 'pymatgen/io/exciting/inputs.py' adding 'pymatgen/io/feff/MPELNESSet.yaml' adding 'pymatgen/io/feff/MPEXAFSSet.yaml' adding 'pymatgen/io/feff/MPEXELFSSet.yaml' adding 'pymatgen/io/feff/MPXANESSet.yaml' adding 'pymatgen/io/feff/__init__.py' adding 'pymatgen/io/feff/inputs.py' adding 'pymatgen/io/feff/outputs.py' adding 'pymatgen/io/feff/sets.py' adding 'pymatgen/io/lammps/CoeffsDataType.yaml' adding 'pymatgen/io/lammps/__init__.py' adding 'pymatgen/io/lammps/data.py' adding 'pymatgen/io/lammps/generators.py' adding 'pymatgen/io/lammps/inputs.py' adding 'pymatgen/io/lammps/outputs.py' adding 'pymatgen/io/lammps/sets.py' adding 'pymatgen/io/lammps/utils.py' adding 'pymatgen/io/lammps/templates/md.template' adding 'pymatgen/io/lammps/templates/minimization.template' adding 'pymatgen/io/lammps/templates/msd.template' adding 'pymatgen/io/lammps/templates/thermalization.template' adding 'pymatgen/io/lobster/__init__.py' adding 'pymatgen/io/lobster/inputs.py' adding 'pymatgen/io/lobster/lobsterenv.py' adding 'pymatgen/io/lobster/outputs.py' adding 'pymatgen/io/lobster/lobster_basis/BASIS_PBE_54_max.yaml' adding 'pymatgen/io/lobster/lobster_basis/BASIS_PBE_54_min.yaml' adding 'pymatgen/io/lobster/lobster_basis/BASIS_PBE_54_standard.yaml' adding 'pymatgen/io/pwmat/__init__.py' adding 'pymatgen/io/pwmat/inputs.py' adding 'pymatgen/io/pwmat/outputs.py' adding 'pymatgen/io/qchem/__init__.py' adding 'pymatgen/io/qchem/inputs.py' adding 'pymatgen/io/qchem/outputs.py' adding 'pymatgen/io/qchem/sets.py' adding 'pymatgen/io/qchem/utils.py' adding 'pymatgen/io/vasp/MITRelaxSet.yaml' adding 'pymatgen/io/vasp/MPAbsorptionSet.yaml' adding 'pymatgen/io/vasp/MPHSERelaxSet.yaml' adding 'pymatgen/io/vasp/MPRelaxSet.yaml' adding 'pymatgen/io/vasp/MPSCANRelaxSet.yaml' adding 'pymatgen/io/vasp/MVLGWSet.yaml' adding 'pymatgen/io/vasp/MVLRelax52Set.yaml' adding 'pymatgen/io/vasp/MatPESStaticSet.yaml' adding 'pymatgen/io/vasp/PBE54Base.yaml' adding 'pymatgen/io/vasp/PBE64Base.yaml' adding 'pymatgen/io/vasp/VASPIncarBase.yaml' adding 'pymatgen/io/vasp/__init__.py' adding 'pymatgen/io/vasp/help.py' adding 'pymatgen/io/vasp/incar_parameters.json' adding 'pymatgen/io/vasp/inputs.py' adding 'pymatgen/io/vasp/optics.py' adding 'pymatgen/io/vasp/outputs.py' adding 'pymatgen/io/vasp/potcar-summary-stats.json.bz2' adding 'pymatgen/io/vasp/sets.py' adding 'pymatgen/io/vasp/vasp_potcar_file_hashes.json' adding 'pymatgen/io/vasp/vasp_potcar_pymatgen_hashes.json' adding 'pymatgen/io/vasp/vdW_parameters.yaml' adding 'pymatgen/io/xtb/__init__.py' adding 'pymatgen/io/xtb/inputs.py' adding 'pymatgen/io/xtb/outputs.py' adding 'pymatgen/optimization/__init__.py' adding 'pymatgen/optimization/linear_assignment.cpython-312-i386-linux-gnu.so' adding 'pymatgen/optimization/neighbors.cpython-312-i386-linux-gnu.so' adding 'pymatgen/phonon/__init__.py' adding 'pymatgen/phonon/bandstructure.py' adding 'pymatgen/phonon/dos.py' adding 'pymatgen/phonon/gruneisen.py' adding 'pymatgen/phonon/ir_spectra.py' adding 'pymatgen/phonon/plotter.py' adding 'pymatgen/phonon/thermal_displacements.py' adding 'pymatgen/symmetry/__init__.py' adding 'pymatgen/symmetry/analyzer.py' adding 'pymatgen/symmetry/bandstructure.py' adding 'pymatgen/symmetry/groups.py' adding 'pymatgen/symmetry/kpath.py' adding 'pymatgen/symmetry/maggroups.py' adding 'pymatgen/symmetry/settings.py' adding 'pymatgen/symmetry/site_symmetries.py' adding 'pymatgen/symmetry/structure.py' adding 'pymatgen/symmetry/symm_data.json' adding 'pymatgen/symmetry/symm_data.yaml' adding 'pymatgen/symmetry/symm_data_magnetic.sqlite' adding 'pymatgen/symmetry/symm_ops.json' adding 'pymatgen/symmetry/symm_ops.yaml' adding 'pymatgen/transformations/__init__.py' adding 'pymatgen/transformations/advanced_transformations.py' adding 'pymatgen/transformations/site_transformations.py' adding 'pymatgen/transformations/standard_transformations.py' adding 'pymatgen/transformations/transformation_abc.py' adding 'pymatgen/util/__init__.py' adding 'pymatgen/util/coord.py' adding 'pymatgen/util/coord_cython.cpython-312-i386-linux-gnu.so' adding 'pymatgen/util/due.py' adding 'pymatgen/util/graph_hashing.py' adding 'pymatgen/util/io_utils.py' adding 'pymatgen/util/joblib.py' adding 'pymatgen/util/misc.py' adding 'pymatgen/util/num.py' adding 'pymatgen/util/numba.py' adding 'pymatgen/util/plotly_chempot_layouts.json' adding 'pymatgen/util/plotly_interface_rxn_layouts.json' adding 'pymatgen/util/plotly_pd_layouts.json' adding 'pymatgen/util/plotting.py' adding 'pymatgen/util/provenance.py' adding 'pymatgen/util/string.py' adding 'pymatgen/util/typing.py' adding 'pymatgen/util/structures/BaNiO3.json' adding 'pymatgen/util/structures/CsCl.json' adding 'pymatgen/util/structures/Graphite.json' adding 'pymatgen/util/structures/He_BCC.json' adding 'pymatgen/util/structures/K2O2.json' adding 'pymatgen/util/structures/La2CoO4F.json' adding 'pymatgen/util/structures/Li10GeP2S12.json' adding 'pymatgen/util/structures/Li2O.json' adding 'pymatgen/util/structures/Li2O2.json' adding 'pymatgen/util/structures/Li3V2(PO4)3.json' adding 'pymatgen/util/structures/LiFePO4.json' adding 'pymatgen/util/structures/NaFePO4.json' adding 'pymatgen/util/structures/Pb2TiZrO6.json' adding 'pymatgen/util/structures/Si.json' adding 'pymatgen/util/structures/SiO2.json' adding 'pymatgen/util/structures/Si_SiO2_Interface.json' adding 'pymatgen/util/structures/Sn.json' adding 'pymatgen/util/structures/SrTiO3.json' adding 'pymatgen/util/structures/TiO2.json' adding 'pymatgen/util/structures/TlBiSe2.json' adding 'pymatgen/util/structures/VO2.json' adding 'pymatgen/util/testing/__init__.py' adding 'pymatgen/vis/ElementColorSchemes.yaml' adding 'pymatgen/vis/__init__.py' adding 'pymatgen/vis/plotters.py' adding 'pymatgen/vis/structure_chemview.py' adding 'pymatgen/vis/structure_vtk.py' adding 'pymatgen-2024.10.29.dist-info/LICENSE' adding 'pymatgen-2024.10.29.dist-info/METADATA' adding 'pymatgen-2024.10.29.dist-info/WHEEL' adding 'pymatgen-2024.10.29.dist-info/entry_points.txt' adding 'pymatgen-2024.10.29.dist-info/top_level.txt' adding 'pymatgen-2024.10.29.dist-info/RECORD' removing build/bdist.linux-i686/wheel Successfully built pymatgen-2024.10.29-cp312-cp312-linux_i686.whl I: pybuild plugin_pyproject:144: Unpacking wheel built for python3.12 with "installer" module debian/rules execute_after_dh_auto_build-indep make[1]: Entering directory '/build/reproducible-path/pymatgen-2024.10.29+dfsg1' PYTHONPATH=/build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build \ sphinx-build docs/apidoc build/html Running Sphinx v7.4.7 loading translations [en]... done making output directory... done WARNING: html_static_path entry 'assets' does not exist WARNING: favicon file 'favicon.ico' does not exist Converting `source_suffix = '.rst'` to `source_suffix = {'.rst': 'restructuredtext'}`. building [mo]: targets for 0 po files that are out of date writing output... building [html]: targets for 49 source files that are out of date updating environment: [new config] 49 added, 0 changed, 0 removed reading sources... [ 2%] index The 道 of Pymatgen 1. Great code enables great materials science. 2. Comprehensive tests ensure robustness. 3. Clear documentation leads to more usage. 4. More usage improves code quality (and increases citations). 5. Even complex scientific ideas can be broken down into simple interfaces. 6. Deep (Hulk-level) understanding is often necessary to develop the right interface design. 7. Slow and accurate is better than fast and wrong. 8. But efficiency matters for core classes. 9. Code entropy always increases in a closed system. 10. Constant refactoring is the hallmark of an open platform. --- First Coder reading sources... [ 4%] modules reading sources... [ 6%] pymatgen reading sources... [ 8%] pymatgen.alchemy reading sources... 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[ 61%] pymatgen.io /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/openff.py:21: UserWarning: To use the pymatgen.io.openff module install openff-toolkit and openff-unitswith `conda install -c conda-forge openff-toolkit openff-units`. warnings.warn( reading sources... [ 63%] pymatgen.io.abinit reading sources... [ 65%] pymatgen.io.aims reading sources... [ 67%] pymatgen.io.aims.sets reading sources... [ 69%] pymatgen.io.cp2k reading sources... [ 71%] pymatgen.io.exciting reading sources... [ 73%] pymatgen.io.feff reading sources... [ 76%] pymatgen.io.lammps reading sources... [ 78%] pymatgen.io.lobster reading sources... [ 80%] pymatgen.io.pwmat reading sources... [ 82%] pymatgen.io.qchem reading sources... [ 84%] pymatgen.io.vasp reading sources... [ 86%] pymatgen.io.xtb reading sources... [ 88%] pymatgen.optimization reading sources... [ 90%] pymatgen.phonon reading sources... [ 92%] pymatgen.symmetry reading sources... [ 94%] pymatgen.transformations reading sources... [ 96%] pymatgen.util reading sources... [ 98%] pymatgen.util.testing reading sources... [100%] pymatgen.vis /build/reproducible-path/pymatgen-2024.10.29+dfsg1/docs/apidoc/pymatgen.rst:4: WARNING: duplicate object description of pymatgen, other instance in index, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/dao.py:docstring of pymatgen.dao:1: WARNING: duplicate object description of pymatgen.dao, other instance in index, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/adsorption.py:docstring of pymatgen.analysis.adsorption.AdsorbateSiteFinder.find_adsorption_sites:17: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/adsorption.py:docstring of pymatgen.analysis.adsorption.AdsorbateSiteFinder.find_adsorption_sites:18: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/dimensionality.py:docstring of pymatgen.analysis.dimensionality.get_dimensionality_cheon:29: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/graphs.py:docstring of pymatgen.analysis.graphs.MoleculeGraph.from_local_env_strategy:6: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/graphs.py:docstring of pymatgen.analysis.graphs.MoleculeGraph.substitute_group:11: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/graphs.py:docstring of pymatgen.analysis.graphs.MoleculeGraph.substitute_group:19: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/graphs.py:docstring of pymatgen.analysis.graphs.StructureGraph.insert_node:15: WARNING: Field list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/graphs.py:docstring of pymatgen.analysis.graphs.StructureGraph.substitute_group:12: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/graphs.py:docstring of pymatgen.analysis.graphs.StructureGraph.substitute_group:20: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/interface_reactions.py:docstring of pymatgen.analysis.interface_reactions.InterfacialReactivity.labels:4: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/local_env.py:docstring of pymatgen.analysis.local_env.CrystalNN:28: WARNING: Bullet list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/local_env.py:docstring of pymatgen.analysis.local_env.CrystalNN:34: WARNING: Bullet list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/local_env.py:docstring of pymatgen.analysis.local_env.CrystalNN:39: WARNING: Bullet list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/local_env.py:docstring of pymatgen.analysis.local_env.CutOffDictNN:17: WARNING: Field list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/local_env.py:docstring of pymatgen.analysis.local_env.LocalStructOrderParams:7: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/local_env.py:docstring of pymatgen.analysis.local_env.LocalStructOrderParams:9: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/local_env.py:docstring of pymatgen.analysis.local_env.LocalStructOrderParams:11: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/local_env.py:docstring of pymatgen.analysis.local_env.LocalStructOrderParams:12: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/local_env.py:docstring of pymatgen.analysis.local_env.LocalStructOrderParams:15: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/local_env.py:docstring of pymatgen.analysis.local_env.LocalStructOrderParams:16: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/local_env.py:docstring of pymatgen.analysis.local_env.LocalStructOrderParams:20: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/local_env.py:docstring of pymatgen.analysis.local_env.LocalStructOrderParams:24: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/local_env.py:docstring of pymatgen.analysis.local_env.LocalStructOrderParams:25: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/local_env.py:docstring of pymatgen.analysis.local_env.LocalStructOrderParams:34: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/local_env.py:docstring of pymatgen.analysis.local_env.LocalStructOrderParams:36: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/local_env.py:docstring of pymatgen.analysis.local_env.LocalStructOrderParams:39: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/local_env.py:docstring of pymatgen.analysis.local_env.LocalStructOrderParams:40: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/local_env.py:docstring of pymatgen.analysis.local_env.LocalStructOrderParams:42: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/local_env.py:docstring of pymatgen.analysis.local_env.LocalStructOrderParams:46: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/local_env.py:docstring of pymatgen.analysis.local_env.LocalStructOrderParams:54: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/local_env.py:docstring of pymatgen.analysis.local_env.VoronoiNN.get_all_voronoi_polyhedra:8: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/local_env.py:docstring of pymatgen.analysis.local_env.VoronoiNN.get_voronoi_polyhedra:14: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/nmr.py:docstring of pymatgen.analysis.nmr.ElectricFieldGradient.coupling_constant:8: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/phase_diagram.py:docstring of pymatgen.analysis.phase_diagram.CompoundPhaseDiagram.num2str:6: WARNING: Field list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/phase_diagram.py:docstring of pymatgen.analysis.phase_diagram.PDEntry.energy:1: WARNING: duplicate object description of pymatgen.analysis.phase_diagram.PDEntry.energy, other instance in pymatgen.analysis, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/phase_diagram.py:docstring of pymatgen.analysis.phase_diagram.PDPlotter:23: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/phase_diagram.py:docstring of pymatgen.analysis.phase_diagram.PDPlotter:27: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/phase_diagram.py:docstring of pymatgen.analysis.phase_diagram.PhaseDiagram:5: WARNING: Enumerated list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/phase_diagram.py:docstring of pymatgen.analysis.phase_diagram.PhaseDiagram:9: WARNING: Enumerated list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/phase_diagram.py:docstring of pymatgen.analysis.phase_diagram.PhaseDiagram.get_phase_separation_energy:15: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/phase_diagram.py:docstring of pymatgen.analysis.phase_diagram.PhaseDiagram.get_phase_separation_energy:16: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/phase_diagram.py:docstring of pymatgen.analysis.phase_diagram.order_phase_diagram:17: WARNING: Bullet list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/quasiharmonic.py:docstring of pymatgen.analysis.quasiharmonic.QuasiHarmonicDebyeApprox:17: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/quasiharmonic.py:docstring of pymatgen.analysis.quasiharmonic.QuasiHarmonicDebyeApprox.gruneisen_parameter:8: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/quasiharmonic.py:docstring of pymatgen.analysis.quasiharmonic.QuasiHarmonicDebyeApprox.gruneisen_parameter:9: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/quasiharmonic.py:docstring of pymatgen.analysis.quasiharmonic.QuasiharmonicDebyeApprox:15: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/structure_analyzer.py:docstring of pymatgen.analysis.structure_analyzer.VoronoiAnalyzer:11: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/structure_matcher.py:docstring of pymatgen.analysis.structure_matcher.StructureMatcher:13: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/structure_matcher.py:docstring of pymatgen.analysis.structure_matcher.StructureMatcher:15: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/structure_matcher.py:docstring of pymatgen.analysis.structure_matcher.StructureMatcher.get_transformation:12: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/surface_analysis.py:docstring of pymatgen.analysis.surface_analysis:6: WARNING: Enumerated list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/surface_analysis.py:docstring of pymatgen.analysis.surface_analysis:24: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/surface_analysis.py:docstring of pymatgen.analysis.surface_analysis:28: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/wulff.py:docstring of pymatgen.analysis.wulff.WulffShape.shape_factor:4: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/xps.py:docstring of pymatgen.analysis.xps.XPS:8: WARNING: Inline emphasis start-string without end-string. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/xps.py:docstring of pymatgen.analysis.xps.XPS:12: WARNING: Inline emphasis start-string without end-string. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/chemenv/connectivity/connected_components.py:docstring of pymatgen.analysis.chemenv.connectivity.connected_components.ConnectedComponent.coordination_sequence:24: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/chemenv/connectivity/connected_components.py:docstring of pymatgen.analysis.chemenv.connectivity.connected_components.ConnectedComponent.coordination_sequence:26: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/chemenv/connectivity/connected_components.py:docstring of pymatgen.analysis.chemenv.connectivity.connected_components.ConnectedComponent.coordination_sequence:29: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/chemenv/connectivity/connected_components.py:docstring of pymatgen.analysis.chemenv.connectivity.connected_components.ConnectedComponent.coordination_sequence:33: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries.py:docstring of pymatgen.analysis.chemenv.coordination_environments.coordination_geometries:3: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/chemenv/coordination_environments/coordination_geometries.py:docstring of pymatgen.analysis.chemenv.coordination_environments.coordination_geometries:5: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/chemenv/coordination_environments/structure_environments.py:docstring of pymatgen.analysis.chemenv.coordination_environments.structure_environments.StructureEnvironments.NeighborsSet.voronoi_grid_surface_points:5: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/chemenv/coordination_environments/structure_environments.py:docstring of pymatgen.analysis.chemenv.coordination_environments.structure_environments.StructureEnvironments.NeighborsSet.voronoi_grid_surface_points:10: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/chemenv/coordination_environments/structure_environments.py:docstring of pymatgen.analysis.chemenv.coordination_environments.structure_environments.StructureEnvironments.NeighborsSet.voronoi_grid_surface_points:15: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/chemenv/coordination_environments/structure_environments.py:docstring of pymatgen.analysis.chemenv.coordination_environments.structure_environments.StructureEnvironments.NeighborsSet.voronoi_grid_surface_points:20: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/chemenv/utils/coordination_geometry_utils.py:docstring of pymatgen.analysis.chemenv.utils.coordination_geometry_utils.collinear:5: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/chemenv/utils/coordination_geometry_utils.py:docstring of pymatgen.analysis.chemenv.utils.coordination_geometry_utils.diamond_functions:19: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/chemenv/utils/coordination_geometry_utils.py:docstring of pymatgen.analysis.chemenv.utils.coordination_geometry_utils.diamond_functions:19: WARNING: Inline substitution_reference start-string without end-string. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/chemenv/utils/coordination_geometry_utils.py:docstring of pymatgen.analysis.chemenv.utils.coordination_geometry_utils.diamond_functions:20: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/chemenv/utils/coordination_geometry_utils.py:docstring of pymatgen.analysis.chemenv.utils.coordination_geometry_utils.diamond_functions:21: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/chemenv/utils/coordination_geometry_utils.py:docstring of pymatgen.analysis.chemenv.utils.coordination_geometry_utils.diamond_functions:22: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/chemenv/utils/coordination_geometry_utils.py:docstring of pymatgen.analysis.chemenv.utils.coordination_geometry_utils.diamond_functions:22: WARNING: Inline substitution_reference start-string without end-string. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/chemenv/utils/coordination_geometry_utils.py:docstring of pymatgen.analysis.chemenv.utils.coordination_geometry_utils.collinear:5: ERROR: Undefined substitution referenced: "p2-p1". /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/chemenv/utils/coordination_geometry_utils.py:docstring of pymatgen.analysis.chemenv.utils.coordination_geometry_utils.collinear:5: ERROR: Undefined substitution referenced: "p2-p1". /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/diffraction/tem.py:docstring of pymatgen.analysis.diffraction.tem.TEMCalculator:3: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/diffraction/tem.py:docstring of pymatgen.analysis.diffraction.tem.TEMCalculator:4: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/diffraction/tem.py:docstring of pymatgen.analysis.diffraction.tem.TEMCalculator.cell_intensity:1: WARNING: Inline substitution_reference start-string without end-string. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/elasticity/elastic.py:docstring of pymatgen.analysis.elasticity.elastic.generate_pseudo:14: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/ferroelectricity/polarization.py:docstring of pymatgen.analysis.ferroelectricity.polarization:34: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/ferroelectricity/polarization.py:docstring of pymatgen.analysis.ferroelectricity.polarization.Polarization:6: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/ferroelectricity/polarization.py:docstring of pymatgen.analysis.ferroelectricity.polarization.Polarization:7: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/ferroelectricity/polarization.py:docstring of pymatgen.analysis.ferroelectricity.polarization.Polarization:15: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/ferroelectricity/polarization.py:docstring of pymatgen.analysis.ferroelectricity.polarization.Polarization:16: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/ferroelectricity/polarization.py:docstring of pymatgen.analysis.ferroelectricity.polarization.Polarization.get_same_branch_polarization_data:35: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/interfaces/zsl.py:docstring of pymatgen.analysis.interfaces.zsl.ZSLGenerator:8: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/interfaces/zsl.py:docstring of pymatgen.analysis.interfaces.zsl.ZSLGenerator:10: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/interfaces/zsl.py:docstring of pymatgen.analysis.interfaces.zsl.ZSLGenerator:13: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/magnetism/analyzer.py:docstring of pymatgen.analysis.magnetism.analyzer.CollinearMagneticStructureAnalyzer:14: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/magnetism/analyzer.py:docstring of pymatgen.analysis.magnetism.analyzer.CollinearMagneticStructureAnalyzer:16: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/structure_prediction/substitutor.py:docstring of pymatgen.analysis.structure_prediction.substitutor.Substitutor.pred_from_list:8: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/structure_prediction/substitutor.py:docstring of pymatgen.analysis.structure_prediction.substitutor.Substitutor.pred_from_list:10: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/xas/spectrum.py:docstring of pymatgen.analysis.xas.spectrum.XAS.stitch:8: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/analysis/xas/spectrum.py:docstring of pymatgen.analysis.xas.spectrum.XAS.stitch:10: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/apps/battery/battery_abc.py:docstring of pymatgen.apps.battery.battery_abc.AbstractElectrode.framework_formula:1: WARNING: duplicate object description of pymatgen.apps.battery.battery_abc.AbstractElectrode.framework_formula, other instance in pymatgen.apps.battery, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/apps/battery/battery_abc.py:docstring of pymatgen.apps.battery.battery_abc.AbstractElectrode.voltage_pairs:1: WARNING: duplicate object description of pymatgen.apps.battery.battery_abc.AbstractElectrode.voltage_pairs, other instance in pymatgen.apps.battery, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/apps/battery/battery_abc.py:docstring of pymatgen.apps.battery.battery_abc.AbstractElectrode.working_ion:1: WARNING: duplicate object description of pymatgen.apps.battery.battery_abc.AbstractElectrode.working_ion, other instance in pymatgen.apps.battery, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/apps/battery/battery_abc.py:docstring of pymatgen.apps.battery.battery_abc.AbstractElectrode.working_ion_entry:1: WARNING: duplicate object description of pymatgen.apps.battery.battery_abc.AbstractElectrode.working_ion_entry, other instance in pymatgen.apps.battery, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/apps/battery/battery_abc.py:docstring of pymatgen.apps.battery.battery_abc.AbstractVoltagePair.frac_charge:1: WARNING: duplicate object description of pymatgen.apps.battery.battery_abc.AbstractVoltagePair.frac_charge, other instance in pymatgen.apps.battery, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/apps/battery/battery_abc.py:docstring of pymatgen.apps.battery.battery_abc.AbstractVoltagePair.frac_discharge:1: WARNING: duplicate object description of pymatgen.apps.battery.battery_abc.AbstractVoltagePair.frac_discharge, other instance in pymatgen.apps.battery, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/apps/battery/battery_abc.py:docstring of pymatgen.apps.battery.battery_abc.AbstractVoltagePair.framework_formula:1: WARNING: duplicate object description of pymatgen.apps.battery.battery_abc.AbstractVoltagePair.framework_formula, other instance in pymatgen.apps.battery, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/apps/battery/battery_abc.py:docstring of pymatgen.apps.battery.battery_abc.AbstractVoltagePair.mAh:1: WARNING: duplicate object description of pymatgen.apps.battery.battery_abc.AbstractVoltagePair.mAh, other instance in pymatgen.apps.battery, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/apps/battery/battery_abc.py:docstring of pymatgen.apps.battery.battery_abc.AbstractVoltagePair.mass_charge:1: WARNING: duplicate object description of pymatgen.apps.battery.battery_abc.AbstractVoltagePair.mass_charge, other instance in pymatgen.apps.battery, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/apps/battery/battery_abc.py:docstring of pymatgen.apps.battery.battery_abc.AbstractVoltagePair.mass_discharge:1: WARNING: duplicate object description of pymatgen.apps.battery.battery_abc.AbstractVoltagePair.mass_discharge, other instance in pymatgen.apps.battery, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/apps/battery/battery_abc.py:docstring of pymatgen.apps.battery.battery_abc.AbstractVoltagePair.vol_charge:1: WARNING: duplicate object description of pymatgen.apps.battery.battery_abc.AbstractVoltagePair.vol_charge, other instance in pymatgen.apps.battery, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/apps/battery/battery_abc.py:docstring of pymatgen.apps.battery.battery_abc.AbstractVoltagePair.vol_discharge:1: WARNING: duplicate object description of pymatgen.apps.battery.battery_abc.AbstractVoltagePair.vol_discharge, other instance in pymatgen.apps.battery, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/apps/battery/battery_abc.py:docstring of pymatgen.apps.battery.battery_abc.AbstractVoltagePair.voltage:1: WARNING: duplicate object description of pymatgen.apps.battery.battery_abc.AbstractVoltagePair.voltage, other instance in pymatgen.apps.battery, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/apps/battery/battery_abc.py:docstring of pymatgen.apps.battery.battery_abc.AbstractVoltagePair.working_ion_entry:1: WARNING: duplicate object description of pymatgen.apps.battery.battery_abc.AbstractVoltagePair.working_ion_entry, other instance in pymatgen.apps.battery, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/apps/battery/conversion_battery.py:docstring of pymatgen.apps.battery.conversion_battery.ConversionElectrode:9: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/apps/battery/conversion_battery.py:docstring of pymatgen.apps.battery.conversion_battery.ConversionElectrode:11: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/apps/battery/conversion_battery.py:docstring of pymatgen.apps.battery.conversion_battery.ConversionVoltagePair.entries_charge:1: WARNING: duplicate object description of pymatgen.apps.battery.conversion_battery.ConversionVoltagePair.entries_charge, other instance in pymatgen.apps.battery, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/apps/battery/conversion_battery.py:docstring of pymatgen.apps.battery.conversion_battery.ConversionVoltagePair.entries_discharge:1: WARNING: duplicate object description of pymatgen.apps.battery.conversion_battery.ConversionVoltagePair.entries_discharge, other instance in pymatgen.apps.battery, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/apps/battery/conversion_battery.py:docstring of pymatgen.apps.battery.conversion_battery.ConversionVoltagePair.rxn:1: WARNING: duplicate object description of pymatgen.apps.battery.conversion_battery.ConversionVoltagePair.rxn, other instance in pymatgen.apps.battery, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/command_line/chargemol_caller.py:docstring of pymatgen.command_line.chargemol_caller.ChargemolAnalysis.summary:3: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/command_line/chargemol_caller.py:docstring of pymatgen.command_line.chargemol_caller.ChargemolAnalysis.summary:11: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/command_line/chargemol_caller.py:docstring of pymatgen.command_line.chargemol_caller.ChargemolAnalysis.summary:13: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/command_line/chargemol_caller.py:docstring of pymatgen.command_line.chargemol_caller.ChargemolAnalysis.summary:14: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/command_line/chargemol_caller.py:docstring of pymatgen.command_line.chargemol_caller.ChargemolAnalysis.summary:15: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/command_line/critic2_caller.py:docstring of pymatgen.command_line.critic2_caller:25: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/command_line/critic2_caller.py:docstring of pymatgen.command_line.critic2_caller:26: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/command_line/critic2_caller.py:docstring of pymatgen.command_line.critic2_caller.Critic2Caller.from_chgcar:21: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/command_line/critic2_caller.py:docstring of pymatgen.command_line.critic2_caller.Critic2Caller.from_chgcar:22: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/command_line/mcsqs_caller.py:docstring of pymatgen.command_line.mcsqs_caller.run_mcsqs:5: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/command_line/mcsqs_caller.py:docstring of pymatgen.command_line.mcsqs_caller.run_mcsqs:6: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/command_line/mcsqs_caller.py:docstring of pymatgen.command_line.mcsqs_caller.run_mcsqs:13: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/command_line/vampire_caller.py:docstring of pymatgen.command_line.vampire_caller.VampireCaller:74: ERROR: Unknown directive type "todo". .. todo:: * Create input files in a temp folder that gets cleaned up after run terminates /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/core/ion.py:docstring of pymatgen.core.ion.Ion.to_reduced_dict:3: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/core/periodic_table.py:docstring of pymatgen.core.periodic_table.DummySpecies.A:1: WARNING: duplicate object description of pymatgen.core.periodic_table.DummySpecies.A, other instance in pymatgen.core, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/core/periodic_table.py:docstring of pymatgen.core.periodic_table.DummySpecies.X:1: WARNING: duplicate object description of pymatgen.core.periodic_table.DummySpecies.X, other instance in pymatgen.core, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/core/periodic_table.py:docstring of pymatgen.core.periodic_table.DummySpecies.Z:1: WARNING: duplicate object description of pymatgen.core.periodic_table.DummySpecies.Z, other instance in pymatgen.core, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/core/periodic_table.py:docstring of pymatgen.core.periodic_table.DummySpecies.oxi_state:1: WARNING: duplicate object description of pymatgen.core.periodic_table.DummySpecies.oxi_state, other instance in pymatgen.core, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/core/periodic_table.py:docstring of pymatgen.core.periodic_table.ElementBase.atomic_orbitals_eV:1: WARNING: duplicate object description of pymatgen.core.periodic_table.ElementBase.atomic_orbitals_eV, other instance in pymatgen.core, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/core/periodic_table.py:docstring of pymatgen.core.periodic_table.ElementBase.electronic_structure:1: WARNING: duplicate object description of pymatgen.core.periodic_table.ElementBase.electronic_structure, other instance in pymatgen.core, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/core/periodic_table.py:docstring of pymatgen.core.periodic_table.ElementBase.electronic_structure:3: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/core/periodic_table.py:docstring of pymatgen.core.periodic_table.ElementBase.electronic_structure:4: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/core/periodic_table.py:docstring of pymatgen.core.periodic_table.Species.electronic_structure:3: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/core/periodic_table.py:docstring of pymatgen.core.periodic_table.Species.electronic_structure:4: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/core/sites.py:docstring of pymatgen.core.sites.PeriodicSite:9: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/core/sites.py:docstring of pymatgen.core.sites.PeriodicSite:11: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/core/sites.py:docstring of pymatgen.core.sites.Site:12: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/core/sites.py:docstring of pymatgen.core.sites.Site:14: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/core/spectrum.py:docstring of pymatgen.core.spectrum.Spectrum:16: WARNING: Inline emphasis start-string without end-string. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/core/spectrum.py:docstring of pymatgen.core.spectrum.Spectrum:20: WARNING: Inline emphasis start-string without end-string. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/core/structure.py:docstring of pymatgen.core.structure.IStructure.matches:9: WARNING: Inline strong start-string without end-string. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/core/structure.py:docstring of pymatgen.core.structure.PeriodicNeighbor:4: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/core/surface.py:docstring of pymatgen.core.surface:8: WARNING: Enumerated list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/core/surface.py:docstring of pymatgen.core.surface.ReconstructionGenerator:29: ERROR: Unknown directive type "todo". .. todo:: - Right now there is no way to specify what atom is being added. Use basis sets in the future? /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/core/surface.py:docstring of pymatgen.core.surface.ReconstructionGenerator:64: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/core/surface.py:docstring of pymatgen.core.surface.ReconstructionGenerator:66: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/core/surface.py:docstring of pymatgen.core.surface.ReconstructionGenerator:74: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/core/surface.py:docstring of pymatgen.core.surface.Slab.get_surface_sites:20: ERROR: Unknown directive type "todo". .. todo:: Is there a way to determine site equivalence between sites in a slab and bulk system? This would allow us get the coordination number of a specific site for multi-elemental systems or systems with more than one inequivalent site. This will allow us to use this for compound systems. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/core/trajectory.py:docstring of pymatgen.core.trajectory.Trajectory:12: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/core/trajectory.py:docstring of pymatgen.core.trajectory.Trajectory:14: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/core/units.py:docstring of pymatgen.core.units:6: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/core/units.py:docstring of pymatgen.core.units:8: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/core/units.py:docstring of pymatgen.core.units.unitized:14: ERROR: Unexpected indentation. WARNING: Failed to get a method signature for pymatgen.core.xcfunc.XcFunc.name: is not a callable object WARNING: Failed to get a method signature for pymatgen.core.xcfunc.XcFunc.type: is not a callable object /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/core/libxcfunc.py:docstring of pymatgen.core.libxcfunc.LibxcFunc.all_kinds:1: ERROR: Unknown target name: "xc". /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/core/xcfunc.py:docstring of pymatgen.core.xcfunc.XcFunc:29: ERROR: Unknown target name: "xc". /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/electronic_structure/bandstructure.py:docstring of pymatgen.electronic_structure.bandstructure.BandStructure.get_cbm:4: WARNING: Bullet list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/electronic_structure/bandstructure.py:docstring of pymatgen.electronic_structure.bandstructure.BandStructure.get_vbm:4: WARNING: Bullet list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/electronic_structure/boltztrap.py:docstring of pymatgen.electronic_structure.boltztrap.BoltztrapAnalyzer.check_acc_bzt_bands:10: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/electronic_structure/boltztrap.py:docstring of pymatgen.electronic_structure.boltztrap.BoltztrapAnalyzer.check_acc_bzt_bands:13: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/electronic_structure/boltztrap.py:docstring of pymatgen.electronic_structure.boltztrap.BoltztrapAnalyzer.check_acc_bzt_bands:20: WARNING: Bullet list ends without a blank line; unexpected unindent. WARNING: autodoc: failed to import module 'boltztrap2' from module 'pymatgen.electronic_structure'; the following exception was raised: BoltzTraP2 has to be installed and working /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/electronic_structure/cohp.py:docstring of pymatgen.electronic_structure.cohp.IcohpCollection.are_cobis:1: WARNING: duplicate object description of pymatgen.electronic_structure.cohp.IcohpCollection.are_cobis, other instance in pymatgen.electronic_structure, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/electronic_structure/cohp.py:docstring of pymatgen.electronic_structure.cohp.IcohpCollection.are_coops:1: WARNING: duplicate object description of pymatgen.electronic_structure.cohp.IcohpCollection.are_coops, other instance in pymatgen.electronic_structure, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/electronic_structure/cohp.py:docstring of pymatgen.electronic_structure.cohp.IcohpCollection.is_spin_polarized:1: WARNING: duplicate object description of pymatgen.electronic_structure.cohp.IcohpCollection.is_spin_polarized, other instance in pymatgen.electronic_structure, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/electronic_structure/cohp.py:docstring of pymatgen.electronic_structure.cohp.IcohpValue:71: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/electronic_structure/cohp.py:docstring of pymatgen.electronic_structure.cohp.IcohpValue:73: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/electronic_structure/cohp.py:docstring of pymatgen.electronic_structure.cohp.IcohpValue:74: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/electronic_structure/cohp.py:docstring of pymatgen.electronic_structure.cohp.IcohpValue.are_cobis:1: WARNING: duplicate object description of pymatgen.electronic_structure.cohp.IcohpValue.are_cobis, other instance in pymatgen.electronic_structure, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/electronic_structure/cohp.py:docstring of pymatgen.electronic_structure.cohp.IcohpValue.are_coops:1: WARNING: duplicate object description of pymatgen.electronic_structure.cohp.IcohpValue.are_coops, other instance in pymatgen.electronic_structure, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/electronic_structure/cohp.py:docstring of pymatgen.electronic_structure.cohp.IcohpValue.icohp:1: WARNING: duplicate object description of pymatgen.electronic_structure.cohp.IcohpValue.icohp, other instance in pymatgen.electronic_structure, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/electronic_structure/cohp.py:docstring of pymatgen.electronic_structure.cohp.IcohpValue.num_bonds:1: WARNING: duplicate object description of pymatgen.electronic_structure.cohp.IcohpValue.num_bonds, other instance in pymatgen.electronic_structure, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/electronic_structure/cohp.py:docstring of pymatgen.electronic_structure.cohp.IcohpValue.summed_icohp:1: WARNING: duplicate object description of pymatgen.electronic_structure.cohp.IcohpValue.summed_icohp, other instance in pymatgen.electronic_structure, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/electronic_structure/cohp.py:docstring of pymatgen.electronic_structure.cohp.get_integrated_cohp_in_energy_range:19: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/electronic_structure/core.py:docstring of pymatgen.electronic_structure.core.Magmom:8: WARNING: Bullet list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/electronic_structure/core.py:docstring of pymatgen.electronic_structure.core.Magmom:12: WARNING: Bullet list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/electronic_structure/core.py:docstring of pymatgen.electronic_structure.core.Magmom:20: WARNING: Bullet list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/electronic_structure/core.py:docstring of pymatgen.electronic_structure.core.Magmom:24: WARNING: Bullet list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/electronic_structure/dos.py:docstring of pymatgen.electronic_structure.dos.CompleteDos.get_band_center:3: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/electronic_structure/dos.py:docstring of pymatgen.electronic_structure.dos.CompleteDos.get_band_kurtosis:5: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/electronic_structure/dos.py:docstring of pymatgen.electronic_structure.dos.CompleteDos.get_band_skewness:5: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/electronic_structure/dos.py:docstring of pymatgen.electronic_structure.dos.CompleteDos.get_band_width:3: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/electronic_structure/dos.py:docstring of pymatgen.electronic_structure.dos.CompleteDos.get_band_width:4: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/electronic_structure/dos.py:docstring of pymatgen.electronic_structure.dos.CompleteDos.get_n_moment:3: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/electronic_structure/dos.py:docstring of pymatgen.electronic_structure.dos.CompleteDos.get_n_moment:4: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/electronic_structure/dos.py:docstring of pymatgen.electronic_structure.dos.LobsterCompleteDos.get_site_orbital_dos:7: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/electronic_structure/dos.py:docstring of pymatgen.electronic_structure.dos.LobsterCompleteDos.get_site_orbital_dos:9: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/electronic_structure/plotter.py:docstring of pymatgen.electronic_structure.plotter.BSPlotterProjected.get_projected_plots_dots:9: WARNING: Inline emphasis start-string without end-string. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/electronic_structure/plotter.py:docstring of pymatgen.electronic_structure.plotter.DosPlotter:4: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/entries/correction_calculator.py:docstring of pymatgen.entries.correction_calculator.CorrectionCalculator.compute_corrections:8: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/entries/mixing_scheme.py:docstring of pymatgen.entries.mixing_scheme.MaterialsProjectDFTMixingScheme.get_mixing_state_data:13: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/common.py:docstring of pymatgen.io.common.VolumetricData.to_hdf5:7: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/common.py:docstring of pymatgen.io.common.VolumetricData.to_hdf5:10: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/common.py:docstring of pymatgen.io.common.VolumetricData.to_hdf5:11: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/gaussian.py:docstring of pymatgen.io.gaussian.GaussianInput:16: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/gaussian.py:docstring of pymatgen.io.gaussian.GaussianOutput:57: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/gaussian.py:docstring of pymatgen.io.gaussian.GaussianOutput:63: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/gaussian.py:docstring of pymatgen.io.gaussian.GaussianOutput:64: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/gaussian.py:docstring of pymatgen.io.gaussian.GaussianOutput.get_scan_plot:1: WARNING: duplicate object description of pymatgen.io.gaussian.GaussianOutput.get_scan_plot, other instance in pymatgen.io, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/gaussian.py:docstring of pymatgen.io.gaussian.GaussianOutput.get_spectre_plot:14: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/gaussian.py:docstring of pymatgen.io.gaussian.GaussianOutput.read_scan:1: WARNING: duplicate object description of pymatgen.io.gaussian.GaussianOutput.read_scan, other instance in pymatgen.io, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/gaussian.py:docstring of pymatgen.io.gaussian.GaussianOutput.save_scan_plot:1: WARNING: duplicate object description of pymatgen.io.gaussian.GaussianOutput.save_scan_plot, other instance in pymatgen.io, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/gaussian.py:docstring of pymatgen.io.gaussian.GaussianOutput.to_input:1: WARNING: duplicate object description of pymatgen.io.gaussian.GaussianOutput.to_input, other instance in pymatgen.io, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/icet.py:docstring of pymatgen.io.icet.IcetSQS.enumerate_sqs_structures:14: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lmto.py:docstring of pymatgen.io.lmto.LMTOCopl:7: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/multiwfn.py:docstring of pymatgen.io.multiwfn.map_atoms_cps:16: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/multiwfn.py:docstring of pymatgen.io.multiwfn.match_atom_cp:18: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/packmol.py:docstring of pymatgen.io.packmol:5: WARNING: Bullet list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/packmol.py:docstring of pymatgen.io.packmol.PackmolBoxGen.get_input_set:5: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/packmol.py:docstring of pymatgen.io.packmol.PackmolBoxGen.get_input_set:9: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/packmol.py:docstring of pymatgen.io.packmol.PackmolBoxGen.get_input_set:15: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/phonopy.py:docstring of pymatgen.io.phonopy.get_gruneisen_ph_bs_symm_line:6: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/phonopy.py:docstring of pymatgen.io.phonopy.get_ph_bs_symm_line:6: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/pwscf.py:docstring of pymatgen.io.pwscf.PWInput:42: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/shengbte.py:docstring of pymatgen.io.shengbte.Control:15: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/shengbte.py:docstring of pymatgen.io.shengbte.Control:16: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/wannier90.py:docstring of pymatgen.io.wannier90.Unk.data:1: WARNING: duplicate object description of pymatgen.io.wannier90.Unk.data, other instance in pymatgen.io, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/wannier90.py:docstring of pymatgen.io.wannier90.Unk.ik:1: WARNING: duplicate object description of pymatgen.io.wannier90.Unk.ik, other instance in pymatgen.io, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/wannier90.py:docstring of pymatgen.io.wannier90.Unk.is_noncollinear:1: WARNING: duplicate object description of pymatgen.io.wannier90.Unk.is_noncollinear, other instance in pymatgen.io, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/wannier90.py:docstring of pymatgen.io.wannier90.Unk.nbnd:1: WARNING: duplicate object description of pymatgen.io.wannier90.Unk.nbnd, other instance in pymatgen.io, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/wannier90.py:docstring of pymatgen.io.wannier90.Unk.ng:1: WARNING: duplicate object description of pymatgen.io.wannier90.Unk.ng, other instance in pymatgen.io, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/zeopp.py:docstring of pymatgen.io.zeopp:10: WARNING: Title underline too short. Zeo++ Installation Steps: ======================== /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/zeopp.py:docstring of pymatgen.io.zeopp:15: WARNING: Title underline too short. Zeo++ Post-Installation Checking: ============================== /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/zeopp.py:docstring of pymatgen.io.zeopp:15: WARNING: Title underline too short. Zeo++ Post-Installation Checking: ============================== /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/zeopp.py:docstring of pymatgen.io.zeopp:19: WARNING: Enumerated list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cif.py:docstring of pymatgen.io.cif.CifBlock:9: ERROR: Unknown target name: "data". /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/abinit/abiobjects.py:docstring of pymatgen.io.abinit.abiobjects.structure_from_abivars:14: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/abinit/abitimer.py:docstring of pymatgen.io.abinit.abitimer.AbinitTimerParser:10: WARNING: Inline emphasis start-string without end-string. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/abinit/abitimer.py:docstring of pymatgen.io.abinit.abitimer.AbinitTimerParser.walk:7: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/abinit/inputs.py:docstring of pymatgen.io.abinit.inputs.ShiftMode:6: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/abinit/inputs.py:docstring of pymatgen.io.abinit.inputs.calc_shiftk:30: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/abinit/inputs.py:docstring of pymatgen.io.abinit.inputs.calc_shiftk:37: WARNING: Block quote ends without a blank line; unexpected unindent. WARNING: Failed to get a method signature for pymatgen.io.abinit.netcdf.EtsfReader.chemical_symbols: is not a callable object WARNING: Failed to get a method signature for pymatgen.io.abinit.pseudos.PawXmlSetup.ae_core_density: is not a callable object WARNING: Failed to get a method signature for pymatgen.io.abinit.pseudos.PawXmlSetup.ae_partial_waves: is not a callable object WARNING: Failed to get a method signature for pymatgen.io.abinit.pseudos.PawXmlSetup.projector_functions: is not a callable object WARNING: Failed to get a method signature for pymatgen.io.abinit.pseudos.PawXmlSetup.pseudo_core_density: is not a callable object WARNING: Failed to get a method signature for pymatgen.io.abinit.pseudos.PawXmlSetup.root: is not a callable object WARNING: Failed to get a method signature for pymatgen.io.abinit.pseudos.Pseudo.md5: is not a callable object /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/abinit/pseudos.py:docstring of pymatgen.io.abinit.pseudos.NcAbinitHeader.gth_header:9: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/abinit/pseudos.py:docstring of pymatgen.io.abinit.pseudos.NcAbinitHeader.oncvpsp_header:5: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/abinit/pseudos.py:docstring of pymatgen.io.abinit.pseudos.NcAbinitHeader.oncvpsp_header:6: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/abinit/pseudos.py:docstring of pymatgen.io.abinit.pseudos.NcAbinitHeader.oncvpsp_header:9: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/abinit/pseudos.py:docstring of pymatgen.io.abinit.pseudos.NcAbinitHeader.tm_header:5: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/abinit/pseudos.py:docstring of pymatgen.io.abinit.pseudos.PawAbinitHeader.paw_header:6: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/abinit/pseudos.py:docstring of pymatgen.io.abinit.pseudos.PawAbinitHeader.paw_header:8: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/abinit/pseudos.py:docstring of pymatgen.io.abinit.pseudos.PawAbinitHeader.paw_header:13: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/abinit/pseudos.py:docstring of pymatgen.io.abinit.pseudos.PawAbinitHeader.paw_header:14: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/abinit/pseudos.py:docstring of pymatgen.io.abinit.pseudos.PawAbinitHeader.paw_header:20: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/abinit/pseudos.py:docstring of pymatgen.io.abinit.pseudos.PawAbinitHeader.paw_header:21: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/abinit/pseudos.py:docstring of pymatgen.io.abinit.pseudos.PawAbinitHeader.paw_header:23: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/abinit/pseudos.py:docstring of pymatgen.io.abinit.pseudos.PawAbinitHeader.paw_header:30: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/abinit/pseudos.py:docstring of pymatgen.io.abinit.pseudos.PawAbinitHeader.paw_header:31: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/abinit/pseudos.py:docstring of pymatgen.io.abinit.pseudos.PawAbinitHeader.paw_header:38: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/abinit/pseudos.py:docstring of pymatgen.io.abinit.pseudos.PawAbinitHeader.paw_header:40: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/abinit/pseudos.py:docstring of pymatgen.io.abinit.pseudos.PawAbinitHeader.paw_header:47: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/abinit/pseudos.py:docstring of pymatgen.io.abinit.pseudos.PawAbinitHeader.paw_header:48: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/abinit/inputs.py:docstring of pymatgen.io.abinit.inputs.BasicAbinitInput:3: ERROR: Undefined substitution referenced: "Structure". /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/abinit/inputs.py:docstring of pymatgen.io.abinit.inputs.BasicAbinitInput:6: ERROR: Undefined substitution referenced: "Pseudo". /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/abinit/inputs.py:docstring of pymatgen.io.abinit.inputs.BasicAbinitInput:6: ERROR: Undefined substitution referenced: "PseudoTable". /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/abinit/inputs.py:docstring of pymatgen.io.abinit.inputs.BasicAbinitInput.pseudos:1: ERROR: Undefined substitution referenced: "Pseudo". /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/abinit/inputs.py:docstring of pymatgen.io.abinit.inputs.BasicAbinitInput.structure:1: ERROR: Undefined substitution referenced: "Structure". /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/abinit/inputs.py:docstring of pymatgen.io.abinit.inputs.BasicMultiDataset:35: ERROR: Undefined substitution referenced: "Structure". /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/abinit/inputs.py:docstring of pymatgen.io.abinit.inputs.ebands_input:1: ERROR: Undefined substitution referenced: "BasicMultiDataset". /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/abinit/inputs.py:docstring of pymatgen.io.abinit.inputs.ebands_input:3: ERROR: Undefined substitution referenced: "Structure". /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/abinit/inputs.py:docstring of pymatgen.io.abinit.inputs.ebands_input:4: ERROR: Undefined substitution referenced: "Pseudo". /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/abinit/inputs.py:docstring of pymatgen.io.abinit.inputs.ebands_input:4: ERROR: Undefined substitution referenced: "PseudoTable". /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/abinit/inputs.py:docstring of pymatgen.io.abinit.inputs.gs_input:3: ERROR: Undefined substitution referenced: "Structure". /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/abinit/inputs.py:docstring of pymatgen.io.abinit.inputs.gs_input:4: ERROR: Undefined substitution referenced: "Pseudo". /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/abinit/inputs.py:docstring of pymatgen.io.abinit.inputs.gs_input:4: ERROR: Undefined substitution referenced: "PseudoTable". /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/abinit/inputs.py:docstring of pymatgen.io.abinit.inputs.ion_ioncell_relax_input:1: ERROR: Undefined substitution referenced: "BasicMultiDataset". /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/abinit/inputs.py:docstring of pymatgen.io.abinit.inputs.ion_ioncell_relax_input:4: ERROR: Undefined substitution referenced: "Structure". /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/abinit/inputs.py:docstring of pymatgen.io.abinit.inputs.ion_ioncell_relax_input:5: ERROR: Undefined substitution referenced: "Pseudo". /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/abinit/inputs.py:docstring of pymatgen.io.abinit.inputs.ion_ioncell_relax_input:5: ERROR: Undefined substitution referenced: "PseudoTable". /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/abinit/inputs.py:docstring of pymatgen.io.abinit.inputs.num_valence_electrons:3: ERROR: Undefined substitution referenced: "Pseudo". /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/aims/inputs.py:docstring of pymatgen.io.aims.inputs.AimsCube.edges:1: WARNING: duplicate object description of pymatgen.io.aims.inputs.AimsCube.edges, other instance in pymatgen.io.aims, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/aims/inputs.py:docstring of pymatgen.io.aims.inputs.AimsCube.elf_type:1: WARNING: duplicate object description of pymatgen.io.aims.inputs.AimsCube.elf_type, other instance in pymatgen.io.aims, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/aims/inputs.py:docstring of pymatgen.io.aims.inputs.AimsCube.filename:1: WARNING: duplicate object description of pymatgen.io.aims.inputs.AimsCube.filename, other instance in pymatgen.io.aims, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/aims/inputs.py:docstring of pymatgen.io.aims.inputs.AimsCube.format:1: WARNING: duplicate object description of pymatgen.io.aims.inputs.AimsCube.format, other instance in pymatgen.io.aims, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/aims/inputs.py:docstring of pymatgen.io.aims.inputs.AimsCube.kpoint:1: WARNING: duplicate object description of pymatgen.io.aims.inputs.AimsCube.kpoint, other instance in pymatgen.io.aims, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/aims/inputs.py:docstring of pymatgen.io.aims.inputs.AimsCube.origin:1: WARNING: duplicate object description of pymatgen.io.aims.inputs.AimsCube.origin, other instance in pymatgen.io.aims, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/aims/inputs.py:docstring of pymatgen.io.aims.inputs.AimsCube.points:1: WARNING: duplicate object description of pymatgen.io.aims.inputs.AimsCube.points, other instance in pymatgen.io.aims, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/aims/inputs.py:docstring of pymatgen.io.aims.inputs.AimsCube.spin_state:1: WARNING: duplicate object description of pymatgen.io.aims.inputs.AimsCube.spin_state, other instance in pymatgen.io.aims, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/aims/inputs.py:docstring of pymatgen.io.aims.inputs.AimsCube.type:1: WARNING: duplicate object description of pymatgen.io.aims.inputs.AimsCube.type, other instance in pymatgen.io.aims, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/aims/inputs.py:docstring of pymatgen.io.aims.inputs.AimsSpeciesFile.data:1: WARNING: duplicate object description of pymatgen.io.aims.inputs.AimsSpeciesFile.data, other instance in pymatgen.io.aims, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/aims/inputs.py:docstring of pymatgen.io.aims.inputs.AimsSpeciesFile.label:1: WARNING: duplicate object description of pymatgen.io.aims.inputs.AimsSpeciesFile.label, other instance in pymatgen.io.aims, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/aims/parsers.py:docstring of pymatgen.io.aims.parsers.AimsOutChunk.lines:1: WARNING: duplicate object description of pymatgen.io.aims.parsers.AimsOutChunk.lines, other instance in pymatgen.io.aims, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/aims/sets/base.py:docstring of pymatgen.io.aims.sets.base.AimsInputGenerator.use_structure_charge:1: WARNING: duplicate object description of pymatgen.io.aims.sets.base.AimsInputGenerator.use_structure_charge, other instance in pymatgen.io.aims.sets, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/aims/sets/base.py:docstring of pymatgen.io.aims.sets.base.AimsInputGenerator.user_kpoints_settings:1: WARNING: duplicate object description of pymatgen.io.aims.sets.base.AimsInputGenerator.user_kpoints_settings, other instance in pymatgen.io.aims.sets, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/aims/sets/base.py:docstring of pymatgen.io.aims.sets.base.AimsInputGenerator.user_params:1: WARNING: duplicate object description of pymatgen.io.aims.sets.base.AimsInputGenerator.user_params, other instance in pymatgen.io.aims.sets, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/aims/sets/bs.py:docstring of pymatgen.io.aims.sets.bs.BandStructureSetGenerator.calc_type:1: WARNING: duplicate object description of pymatgen.io.aims.sets.bs.BandStructureSetGenerator.calc_type, other instance in pymatgen.io.aims.sets, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/aims/sets/bs.py:docstring of pymatgen.io.aims.sets.bs.BandStructureSetGenerator.k_point_density:1: WARNING: duplicate object description of pymatgen.io.aims.sets.bs.BandStructureSetGenerator.k_point_density, other instance in pymatgen.io.aims.sets, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/aims/sets/bs.py:docstring of pymatgen.io.aims.sets.bs.GWSetGenerator.calc_type:1: WARNING: duplicate object description of pymatgen.io.aims.sets.bs.GWSetGenerator.calc_type, other instance in pymatgen.io.aims.sets, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/aims/sets/bs.py:docstring of pymatgen.io.aims.sets.bs.GWSetGenerator.k_point_density:1: WARNING: duplicate object description of pymatgen.io.aims.sets.bs.GWSetGenerator.k_point_density, other instance in pymatgen.io.aims.sets, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/aims/sets/core.py:docstring of pymatgen.io.aims.sets.core.RelaxSetGenerator.calc_type:1: WARNING: duplicate object description of pymatgen.io.aims.sets.core.RelaxSetGenerator.calc_type, other instance in pymatgen.io.aims.sets, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/aims/sets/core.py:docstring of pymatgen.io.aims.sets.core.RelaxSetGenerator.max_force:1: WARNING: duplicate object description of pymatgen.io.aims.sets.core.RelaxSetGenerator.max_force, other instance in pymatgen.io.aims.sets, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/aims/sets/core.py:docstring of pymatgen.io.aims.sets.core.RelaxSetGenerator.method:1: WARNING: duplicate object description of pymatgen.io.aims.sets.core.RelaxSetGenerator.method, other instance in pymatgen.io.aims.sets, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/aims/sets/core.py:docstring of pymatgen.io.aims.sets.core.RelaxSetGenerator.relax_cell:1: WARNING: duplicate object description of pymatgen.io.aims.sets.core.RelaxSetGenerator.relax_cell, other instance in pymatgen.io.aims.sets, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/aims/sets/core.py:docstring of pymatgen.io.aims.sets.core.SocketIOSetGenerator.calc_type:1: WARNING: duplicate object description of pymatgen.io.aims.sets.core.SocketIOSetGenerator.calc_type, other instance in pymatgen.io.aims.sets, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/aims/sets/core.py:docstring of pymatgen.io.aims.sets.core.SocketIOSetGenerator.host:1: WARNING: duplicate object description of pymatgen.io.aims.sets.core.SocketIOSetGenerator.host, other instance in pymatgen.io.aims.sets, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/aims/sets/core.py:docstring of pymatgen.io.aims.sets.core.SocketIOSetGenerator.port:1: WARNING: duplicate object description of pymatgen.io.aims.sets.core.SocketIOSetGenerator.port, other instance in pymatgen.io.aims.sets, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/aims/sets/core.py:docstring of pymatgen.io.aims.sets.core.StaticSetGenerator.calc_type:1: WARNING: duplicate object description of pymatgen.io.aims.sets.core.StaticSetGenerator.calc_type, other instance in pymatgen.io.aims.sets, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/aims/sets/magnetism.py:docstring of pymatgen.io.aims.sets.magnetism.MagneticStaticSetGenerator.calc_type:1: WARNING: duplicate object description of pymatgen.io.aims.sets.magnetism.MagneticStaticSetGenerator.calc_type, other instance in pymatgen.io.aims.sets, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.AtomicMetadata.alias_names:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.AtomicMetadata.alias_names, other instance in pymatgen.io.cp2k, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.AtomicMetadata.element:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.AtomicMetadata.element, other instance in pymatgen.io.cp2k, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.AtomicMetadata.filename:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.AtomicMetadata.filename, other instance in pymatgen.io.cp2k, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.AtomicMetadata.info:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.AtomicMetadata.info, other instance in pymatgen.io.cp2k, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.AtomicMetadata.name:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.AtomicMetadata.name, other instance in pymatgen.io.cp2k, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.AtomicMetadata.potential:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.AtomicMetadata.potential, other instance in pymatgen.io.cp2k, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.AtomicMetadata.version:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.AtomicMetadata.version, other instance in pymatgen.io.cp2k, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.BasisInfo.admm:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.BasisInfo.admm, other instance in pymatgen.io.cp2k, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.BasisInfo.cc:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.BasisInfo.cc, other instance in pymatgen.io.cp2k, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.BasisInfo.contracted:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.BasisInfo.contracted, other instance in pymatgen.io.cp2k, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.BasisInfo.core:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.BasisInfo.core, other instance in pymatgen.io.cp2k, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.BasisInfo.diffuse:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.BasisInfo.diffuse, other instance in pymatgen.io.cp2k, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.BasisInfo.electrons:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.BasisInfo.electrons, other instance in pymatgen.io.cp2k, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.BasisInfo.lri:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.BasisInfo.lri, other instance in pymatgen.io.cp2k, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.BasisInfo.molopt:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.BasisInfo.molopt, other instance in pymatgen.io.cp2k, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.BasisInfo.pc:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.BasisInfo.pc, other instance in pymatgen.io.cp2k, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.BasisInfo.polarization:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.BasisInfo.polarization, other instance in pymatgen.io.cp2k, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.BasisInfo.sr:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.BasisInfo.sr, other instance in pymatgen.io.cp2k, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.BasisInfo.valence:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.BasisInfo.valence, other instance in pymatgen.io.cp2k, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.BasisInfo.xc:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.BasisInfo.xc, other instance in pymatgen.io.cp2k, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.Davidson:7: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.Davidson:10: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.Davidson:19: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.GaussianTypeOrbitalBasisSet.coefficients:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.GaussianTypeOrbitalBasisSet.coefficients, other instance in pymatgen.io.cp2k, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.GaussianTypeOrbitalBasisSet.exponents:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.GaussianTypeOrbitalBasisSet.exponents, other instance in pymatgen.io.cp2k, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.GaussianTypeOrbitalBasisSet.info:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.GaussianTypeOrbitalBasisSet.info, other instance in pymatgen.io.cp2k, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.GaussianTypeOrbitalBasisSet.lmax:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.GaussianTypeOrbitalBasisSet.lmax, other instance in pymatgen.io.cp2k, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.GaussianTypeOrbitalBasisSet.lmin:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.GaussianTypeOrbitalBasisSet.lmin, other instance in pymatgen.io.cp2k, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.GaussianTypeOrbitalBasisSet.n:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.GaussianTypeOrbitalBasisSet.n, other instance in pymatgen.io.cp2k, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.GaussianTypeOrbitalBasisSet.nset:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.GaussianTypeOrbitalBasisSet.nset, other instance in pymatgen.io.cp2k, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.GaussianTypeOrbitalBasisSet.nshell:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.GaussianTypeOrbitalBasisSet.nshell, other instance in pymatgen.io.cp2k, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.GthPotential.c_exp_ppl:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.GthPotential.c_exp_ppl, other instance in pymatgen.io.cp2k, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.GthPotential.hprj_ppnl:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.GthPotential.hprj_ppnl, other instance in pymatgen.io.cp2k, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.GthPotential.n_elecs:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.GthPotential.n_elecs, other instance in pymatgen.io.cp2k, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.GthPotential.nexp_ppl:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.GthPotential.nexp_ppl, other instance in pymatgen.io.cp2k, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.GthPotential.nprj:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.GthPotential.nprj, other instance in pymatgen.io.cp2k, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.GthPotential.nprj_ppnl:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.GthPotential.nprj_ppnl, other instance in pymatgen.io.cp2k, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.GthPotential.r_loc:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.GthPotential.r_loc, other instance in pymatgen.io.cp2k, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.GthPotential.radii:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.GthPotential.radii, other instance in pymatgen.io.cp2k, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.KpointSet:8: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.Kpoint_Set:6: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.PotentialInfo.electrons:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.PotentialInfo.electrons, other instance in pymatgen.io.cp2k, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.PotentialInfo.nlcc:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.PotentialInfo.nlcc, other instance in pymatgen.io.cp2k, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.PotentialInfo.potential_type:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.PotentialInfo.potential_type, other instance in pymatgen.io.cp2k, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.PotentialInfo.xc:1: WARNING: duplicate object description of pymatgen.io.cp2k.inputs.PotentialInfo.xc, other instance in pymatgen.io.cp2k, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.Scf:14: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.Scf:15: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.Scf:19: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.Section.update:13: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/inputs.py:docstring of pymatgen.io.cp2k.inputs.Section.update:17: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/outputs.py:docstring of pymatgen.io.cp2k.outputs.parse_pdos:22: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/sets.py:docstring of pymatgen.io.cp2k.sets.CellOptSet:17: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/sets.py:docstring of pymatgen.io.cp2k.sets.DftSet:19: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/sets.py:docstring of pymatgen.io.cp2k.sets.DftSet.get_basis_and_potential:21: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/sets.py:docstring of pymatgen.io.cp2k.sets.DftSet.print_v_hartree:3: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/sets.py:docstring of pymatgen.io.cp2k.sets.HybridCellOptSet:17: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/sets.py:docstring of pymatgen.io.cp2k.sets.HybridRelaxSet:17: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/sets.py:docstring of pymatgen.io.cp2k.sets.HybridStaticSet:17: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/sets.py:docstring of pymatgen.io.cp2k.sets.RelaxSet:17: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/sets.py:docstring of pymatgen.io.cp2k.sets.StaticSet:17: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/utils.py:docstring of pymatgen.io.cp2k.utils.preprocessor:10: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/utils.py:docstring of pymatgen.io.cp2k.utils.preprocessor:12: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/cp2k/utils.py:docstring of pymatgen.io.cp2k.utils.preprocessor:13: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/exciting/inputs.py:docstring of pymatgen.io.exciting.inputs.ExcitingInput.lockxyz:1: WARNING: duplicate object description of pymatgen.io.exciting.inputs.ExcitingInput.lockxyz, other instance in pymatgen.io.exciting, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/feff/inputs.py:docstring of pymatgen.io.feff.inputs.Header:6: WARNING: Bullet list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/feff/inputs.py:docstring of pymatgen.io.feff.inputs.Header.from_str:4: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/feff/sets.py:docstring of pymatgen.io.feff.sets.FEFFDictSet:26: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lammps/data.py:docstring of pymatgen.io.lammps.data.CombinedData.as_lammpsdata:5: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lammps/data.py:docstring of pymatgen.io.lammps.data.CombinedData.as_lammpsdata:8: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lammps/data.py:docstring of pymatgen.io.lammps.data.CombinedData.disassemble:5: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lammps/data.py:docstring of pymatgen.io.lammps.data.CombinedData.disassemble:7: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lammps/data.py:docstring of pymatgen.io.lammps.data.CombinedData.get_str:4: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lammps/data.py:docstring of pymatgen.io.lammps.data.CombinedData.get_str:5: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lammps/data.py:docstring of pymatgen.io.lammps.data.ForceField:42: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lammps/data.py:docstring of pymatgen.io.lammps.data.ForceField:57: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lammps/data.py:docstring of pymatgen.io.lammps.data.LammpsData.set_charge_atom_type:6: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lammps/data.py:docstring of pymatgen.io.lammps.data.Topology:25: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lammps/data.py:docstring of pymatgen.io.lammps.data.Topology:29: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lammps/generators.py:docstring of pymatgen.io.lammps.generators.BaseLammpsGenerator.calc_type:1: WARNING: duplicate object description of pymatgen.io.lammps.generators.BaseLammpsGenerator.calc_type, other instance in pymatgen.io.lammps, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lammps/generators.py:docstring of pymatgen.io.lammps.generators.BaseLammpsGenerator.keep_stages:1: WARNING: duplicate object description of pymatgen.io.lammps.generators.BaseLammpsGenerator.keep_stages, other instance in pymatgen.io.lammps, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lammps/generators.py:docstring of pymatgen.io.lammps.generators.BaseLammpsGenerator.settings:1: WARNING: duplicate object description of pymatgen.io.lammps.generators.BaseLammpsGenerator.settings, other instance in pymatgen.io.lammps, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lammps/generators.py:docstring of pymatgen.io.lammps.generators.BaseLammpsGenerator.template:1: WARNING: duplicate object description of pymatgen.io.lammps.generators.BaseLammpsGenerator.template, other instance in pymatgen.io.lammps, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lammps/inputs.py:docstring of pymatgen.io.lammps.inputs.LammpsInputFile:15: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lammps/inputs.py:docstring of pymatgen.io.lammps.inputs.LammpsInputFile:9: WARNING: Inline literal start-string without end-string. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lammps/inputs.py:docstring of pymatgen.io.lammps.inputs.LammpsInputFile:17: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lammps/inputs.py:docstring of pymatgen.io.lammps.inputs.LammpsInputFile.add_commands:11: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lammps/inputs.py:docstring of pymatgen.io.lammps.inputs.LammpsInputFile.add_commands:7: WARNING: Inline literal start-string without end-string. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lammps/inputs.py:docstring of pymatgen.io.lammps.inputs.LammpsInputFile.add_commands:12: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lammps/inputs.py:docstring of pymatgen.io.lammps.inputs.LammpsInputFile.add_commands:17: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lammps/inputs.py:docstring of pymatgen.io.lammps.inputs.LammpsInputFile.add_commands:14: WARNING: Inline literal start-string without end-string. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lammps/inputs.py:docstring of pymatgen.io.lammps.inputs.LammpsInputFile.add_commands:19: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lammps/inputs.py:docstring of pymatgen.io.lammps.inputs.LammpsInputFile.add_commands:21: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lammps/inputs.py:docstring of pymatgen.io.lammps.inputs.LammpsInputFile.add_commands:23: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lammps/inputs.py:docstring of pymatgen.io.lammps.inputs.LammpsInputFile.add_stage:9: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lammps/inputs.py:docstring of pymatgen.io.lammps.inputs.LammpsInputFile.add_stage:6: WARNING: Inline literal start-string without end-string. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lammps/inputs.py:docstring of pymatgen.io.lammps.inputs.LammpsInputFile.add_stage:11: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lammps/inputs.py:docstring of pymatgen.io.lammps.inputs.LammpsInputFile.add_stage:19: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lammps/inputs.py:docstring of pymatgen.io.lammps.inputs.LammpsInputFile.add_stage:21: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lammps/inputs.py:docstring of pymatgen.io.lammps.inputs.LammpsInputFile.add_stage:22: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lammps/inputs.py:docstring of pymatgen.io.lammps.inputs.LammpsInputFile.add_stage:23: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lammps/inputs.py:docstring of pymatgen.io.lammps.inputs.LammpsInputFile.add_stage:28: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lammps/inputs.py:docstring of pymatgen.io.lammps.inputs.LammpsInputFile.add_stage:25: WARNING: Inline literal start-string without end-string. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lammps/inputs.py:docstring of pymatgen.io.lammps.inputs.LammpsInputFile.add_stage:35: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lammps/data.py:docstring of pymatgen.io.lammps.data.CombinedData:6: ERROR: Unknown target name: "a-za-z0-9". /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lobster/lobsterenv.py:docstring of pymatgen.io.lobster.lobsterenv.LobsterNeighbors:24: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lobster/lobsterenv.py:docstring of pymatgen.io.lobster.lobsterenv.LobsterNeighbors.get_info_cohps_to_neighbors:21: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lobster/outputs.py:docstring of pymatgen.io.lobster.outputs.Bandoverlaps:22: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lobster/outputs.py:docstring of pymatgen.io.lobster.outputs.Bandoverlaps:26: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lobster/outputs.py:docstring of pymatgen.io.lobster.outputs.Bandoverlaps:27: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lobster/outputs.py:docstring of pymatgen.io.lobster.outputs.Cohpcar:7: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lobster/outputs.py:docstring of pymatgen.io.lobster.outputs.Cohpcar:10: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lobster/outputs.py:docstring of pymatgen.io.lobster.outputs.Cohpcar:37: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lobster/outputs.py:docstring of pymatgen.io.lobster.outputs.Cohpcar:42: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lobster/outputs.py:docstring of pymatgen.io.lobster.outputs.Doscar.completedos:1: WARNING: duplicate object description of pymatgen.io.lobster.outputs.Doscar.completedos, other instance in pymatgen.io.lobster, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lobster/outputs.py:docstring of pymatgen.io.lobster.outputs.Doscar.energies:1: WARNING: duplicate object description of pymatgen.io.lobster.outputs.Doscar.energies, other instance in pymatgen.io.lobster, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lobster/outputs.py:docstring of pymatgen.io.lobster.outputs.Doscar.is_spin_polarized:1: WARNING: duplicate object description of pymatgen.io.lobster.outputs.Doscar.is_spin_polarized, other instance in pymatgen.io.lobster, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lobster/outputs.py:docstring of pymatgen.io.lobster.outputs.Doscar.itdensities:1: WARNING: duplicate object description of pymatgen.io.lobster.outputs.Doscar.itdensities, other instance in pymatgen.io.lobster, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lobster/outputs.py:docstring of pymatgen.io.lobster.outputs.Doscar.pdos:1: WARNING: duplicate object description of pymatgen.io.lobster.outputs.Doscar.pdos, other instance in pymatgen.io.lobster, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lobster/outputs.py:docstring of pymatgen.io.lobster.outputs.Doscar.tdensities:1: WARNING: duplicate object description of pymatgen.io.lobster.outputs.Doscar.tdensities, other instance in pymatgen.io.lobster, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lobster/outputs.py:docstring of pymatgen.io.lobster.outputs.Doscar.tdos:1: WARNING: duplicate object description of pymatgen.io.lobster.outputs.Doscar.tdos, other instance in pymatgen.io.lobster, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lobster/outputs.py:docstring of pymatgen.io.lobster.outputs.Grosspop:9: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lobster/outputs.py:docstring of pymatgen.io.lobster.outputs.Grosspop:10: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lobster/outputs.py:docstring of pymatgen.io.lobster.outputs.Grosspop:12: WARNING: Bullet list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lobster/outputs.py:docstring of pymatgen.io.lobster.outputs.Icohplist:31: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lobster/outputs.py:docstring of pymatgen.io.lobster.outputs.NciCobiList:13: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/lobster/outputs.py:docstring of pymatgen.io.lobster.outputs.NciCobiList:18: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/pwmat/outputs.py:docstring of pymatgen.io.pwmat.outputs.DosSpin.get_partial_dos:5: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/inputs.py:docstring of pymatgen.io.qchem.inputs.QCInput:64: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/inputs.py:docstring of pymatgen.io.qchem.inputs.QCInput:66: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/inputs.py:docstring of pymatgen.io.qchem.inputs.QCInput:67: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/inputs.py:docstring of pymatgen.io.qchem.inputs.QCInput:74: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/inputs.py:docstring of pymatgen.io.qchem.inputs.QCInput:79: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/inputs.py:docstring of pymatgen.io.qchem.inputs.QCInput:81: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/inputs.py:docstring of pymatgen.io.qchem.inputs.QCInput:85: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/inputs.py:docstring of pymatgen.io.qchem.inputs.QCInput:86: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/inputs.py:docstring of pymatgen.io.qchem.inputs.QCInput:97: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/inputs.py:docstring of pymatgen.io.qchem.inputs.QCInput:99: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/inputs.py:docstring of pymatgen.io.qchem.inputs.QCInput:101: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/inputs.py:docstring of pymatgen.io.qchem.inputs.QCInput:102: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/inputs.py:docstring of pymatgen.io.qchem.inputs.QCInput:117: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/inputs.py:docstring of pymatgen.io.qchem.inputs.QCInput:137: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/inputs.py:docstring of pymatgen.io.qchem.inputs.QCInput.pcm_nonels_template:6: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/inputs.py:docstring of pymatgen.io.qchem.inputs.QCInput.pcm_nonels_template:14: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/outputs.py:docstring of pymatgen.io.qchem.outputs.QCOutput.multiple_outputs_from_file:3: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/outputs.py:docstring of pymatgen.io.qchem.outputs.QCOutput.multiple_outputs_from_file:6: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/outputs.py:docstring of pymatgen.io.qchem.outputs.check_for_structure_changes:3: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/outputs.py:docstring of pymatgen.io.qchem.outputs.check_for_structure_changes:4: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/outputs.py:docstring of pymatgen.io.qchem.outputs.check_for_structure_changes:7: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/outputs.py:docstring of pymatgen.io.qchem.outputs.check_for_structure_changes:8: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/outputs.py:docstring of pymatgen.io.qchem.outputs.check_for_structure_changes:13: WARNING: Bullet list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.ForceSet:68: WARNING: Inline emphasis start-string without end-string. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.ForceSet:88: WARNING: Enumerated list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.ForceSet:95: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.ForceSet:97: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.ForceSet:102: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.ForceSet:103: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.ForceSet:110: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.ForceSet:117: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.ForceSet:119: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.ForceSet:124: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.ForceSet:125: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.ForceSet:127: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.ForceSet:133: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.ForceSet:135: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.ForceSet:140: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.ForceSet:141: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.ForceSet:142: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.FreqSet:68: WARNING: Inline emphasis start-string without end-string. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.FreqSet:88: WARNING: Enumerated list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.FreqSet:95: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.FreqSet:97: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.FreqSet:102: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.FreqSet:103: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.FreqSet:110: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.FreqSet:117: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.FreqSet:119: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.FreqSet:124: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.FreqSet:125: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.FreqSet:127: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.FreqSet:133: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.FreqSet:135: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.FreqSet:140: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.FreqSet:141: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.FreqSet:142: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.OptSet:81: WARNING: Inline emphasis start-string without end-string. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.OptSet:101: WARNING: Enumerated list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.OptSet:108: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.OptSet:110: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.OptSet:115: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.OptSet:116: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.OptSet:123: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.OptSet:130: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.OptSet:132: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.OptSet:137: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.OptSet:138: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.OptSet:140: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.OptSet:146: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.OptSet:148: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.OptSet:153: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.OptSet:154: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.OptSet:155: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.PESScanSet:88: WARNING: Inline emphasis start-string without end-string. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.QChemDictSet:87: WARNING: Inline emphasis start-string without end-string. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.QChemDictSet:107: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.QChemDictSet:108: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.QChemDictSet:119: WARNING: Enumerated list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.QChemDictSet:126: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.QChemDictSet:128: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.QChemDictSet:133: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.QChemDictSet:134: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.QChemDictSet:141: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.QChemDictSet:148: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.QChemDictSet:150: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.QChemDictSet:155: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.QChemDictSet:156: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.QChemDictSet:158: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.QChemDictSet:164: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.QChemDictSet:166: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.QChemDictSet:171: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.QChemDictSet:172: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.QChemDictSet:173: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.QChemDictSet:183: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.QChemDictSet:186: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.QChemDictSet:188: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.QChemDictSet:190: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.QChemDictSet:191: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.SinglePointSet:76: WARNING: Inline emphasis start-string without end-string. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.SinglePointSet:90: WARNING: Enumerated list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.SinglePointSet:97: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.SinglePointSet:99: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.SinglePointSet:104: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.SinglePointSet:105: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.SinglePointSet:112: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.SinglePointSet:119: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.SinglePointSet:121: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.SinglePointSet:126: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.SinglePointSet:127: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.SinglePointSet:129: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.SinglePointSet:135: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.SinglePointSet:137: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.SinglePointSet:142: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.SinglePointSet:143: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.SinglePointSet:144: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.SinglePointSet:152: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.SinglePointSet:155: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.SinglePointSet:157: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.SinglePointSet:159: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.SinglePointSet:160: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/qchem/sets.py:docstring of pymatgen.io.qchem.sets.TransitionStateSet:77: WARNING: Inline emphasis start-string without end-string. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/vasp/inputs.py:docstring of pymatgen.io.vasp.inputs.Poscar.lattice_velocities:1: WARNING: duplicate object description of pymatgen.io.vasp.inputs.Poscar.lattice_velocities, other instance in pymatgen.io.vasp, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/vasp/inputs.py:docstring of pymatgen.io.vasp.inputs.Poscar.predictor_corrector:1: WARNING: duplicate object description of pymatgen.io.vasp.inputs.Poscar.predictor_corrector, other instance in pymatgen.io.vasp, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/vasp/inputs.py:docstring of pymatgen.io.vasp.inputs.Poscar.predictor_corrector_preamble:1: WARNING: duplicate object description of pymatgen.io.vasp.inputs.Poscar.predictor_corrector_preamble, other instance in pymatgen.io.vasp, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/vasp/inputs.py:docstring of pymatgen.io.vasp.inputs.Poscar.selective_dynamics:1: WARNING: duplicate object description of pymatgen.io.vasp.inputs.Poscar.selective_dynamics, other instance in pymatgen.io.vasp, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/vasp/inputs.py:docstring of pymatgen.io.vasp.inputs.Poscar.velocities:1: WARNING: duplicate object description of pymatgen.io.vasp.inputs.Poscar.velocities, other instance in pymatgen.io.vasp, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/vasp/inputs.py:docstring of pymatgen.io.vasp.inputs.PotcarSingle.identify_potcar:17: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/vasp/inputs.py:docstring of pymatgen.io.vasp.inputs.PotcarSingle.identify_potcar_hash_based:13: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/vasp/inputs.py:docstring of pymatgen.io.vasp.inputs.PotcarSingle.is_valid:3: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/vasp/inputs.py:docstring of pymatgen.io.vasp.inputs.PotcarSingle.is_valid:7: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/vasp/inputs.py:docstring of pymatgen.io.vasp.inputs.PotcarSingle.is_valid:9: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/vasp/inputs.py:docstring of pymatgen.io.vasp.inputs.PotcarSingle.is_valid:11: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/vasp/inputs.py:docstring of pymatgen.io.vasp.inputs.PotcarSingle.is_valid:12: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/vasp/inputs.py:docstring of pymatgen.io.vasp.inputs.PotcarSingle.is_valid:21: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/vasp/inputs.py:docstring of pymatgen.io.vasp.inputs.PotcarSingle.is_valid:27: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/vasp/inputs.py:docstring of pymatgen.io.vasp.inputs.VaspInput.write_input:18: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/vasp/outputs.py:docstring of pymatgen.io.vasp.outputs.Dynmat:7: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/vasp/outputs.py:docstring of pymatgen.io.vasp.outputs.Dynmat:8: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/vasp/outputs.py:docstring of pymatgen.io.vasp.outputs.Outcar.read_fermi_contact_shift:8: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/vasp/outputs.py:docstring of pymatgen.io.vasp.outputs.Outcar.read_fermi_contact_shift:11: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/vasp/outputs.py:docstring of pymatgen.io.vasp.outputs.Outcar.read_fermi_contact_shift:11: CRITICAL: Missing matching underline for section title overline. ------------------------------------------------------------- which corresponds to: [[-0.002, -0.002, -0.051, 0.0, -0.052], /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/vasp/outputs.py:docstring of pymatgen.io.vasp.outputs.WSWQ:3: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/vasp/outputs.py:docstring of pymatgen.io.vasp.outputs.WSWQ:8: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/vasp/outputs.py:docstring of pymatgen.io.vasp.outputs.WSWQ:12: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/vasp/outputs.py:docstring of pymatgen.io.vasp.outputs.WSWQ.me_imag:1: WARNING: duplicate object description of pymatgen.io.vasp.outputs.WSWQ.me_imag, other instance in pymatgen.io.vasp, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/vasp/outputs.py:docstring of pymatgen.io.vasp.outputs.WSWQ.me_real:1: WARNING: duplicate object description of pymatgen.io.vasp.outputs.WSWQ.me_real, other instance in pymatgen.io.vasp, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/vasp/outputs.py:docstring of pymatgen.io.vasp.outputs.WSWQ.nbands:1: WARNING: duplicate object description of pymatgen.io.vasp.outputs.WSWQ.nbands, other instance in pymatgen.io.vasp, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/vasp/outputs.py:docstring of pymatgen.io.vasp.outputs.WSWQ.nkpoints:1: WARNING: duplicate object description of pymatgen.io.vasp.outputs.WSWQ.nkpoints, other instance in pymatgen.io.vasp, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/vasp/outputs.py:docstring of pymatgen.io.vasp.outputs.WSWQ.nspin:1: WARNING: duplicate object description of pymatgen.io.vasp.outputs.WSWQ.nspin, other instance in pymatgen.io.vasp, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/vasp/outputs.py:docstring of pymatgen.io.vasp.outputs.Waveder:21: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/vasp/outputs.py:docstring of pymatgen.io.vasp.outputs.Waveder.cder_imag:1: WARNING: duplicate object description of pymatgen.io.vasp.outputs.Waveder.cder_imag, other instance in pymatgen.io.vasp, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/vasp/outputs.py:docstring of pymatgen.io.vasp.outputs.Waveder.cder_real:1: WARNING: duplicate object description of pymatgen.io.vasp.outputs.Waveder.cder_real, other instance in pymatgen.io.vasp, use :no-index: for one of them WARNING: Failed to get a method signature for pymatgen.phonon.dos.PhononDos.ind_zero_freq: is not a callable object /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/phonon/ir_spectra.py:docstring of pymatgen.phonon.ir_spectra.IRDielectricTensor:1: ERROR: Unknown interpreted text role "cite". /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/phonon/ir_spectra.py:docstring of pymatgen.phonon.ir_spectra.IRDielectricTensor:5: ERROR: Unknown interpreted text role "cite". /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/phonon/plotter.py:docstring of pymatgen.phonon.plotter.PhononDosPlotter:4: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/phonon/thermal_displacements.py:docstring of pymatgen.phonon.thermal_displacements.ThermalDisplacementMatrices.compute_directionality_quality_criterion:11: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/phonon/thermal_displacements.py:docstring of pymatgen.phonon.thermal_displacements.ThermalDisplacementMatrices.to_structure_with_site_properties_Ucif:5: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/phonon/thermal_displacements.py:docstring of pymatgen.phonon.thermal_displacements.ThermalDisplacementMatrices.to_structure_with_site_properties_Ucif:6: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/phonon/gruneisen.py:docstring of pymatgen.phonon.gruneisen.GruneisenParameter.average_gruneisen:1: ERROR: Unknown target name: "materialia". /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/symmetry/analyzer.py:docstring of pymatgen.symmetry.analyzer:7: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/symmetry/analyzer.py:docstring of pymatgen.symmetry.analyzer.PointGroupAnalyzer.symmetrize_molecule:16: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/symmetry/analyzer.py:docstring of pymatgen.symmetry.analyzer.PointGroupAnalyzer.symmetrize_molecule:17: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/symmetry/analyzer.py:docstring of pymatgen.symmetry.analyzer.SpacegroupAnalyzer.get_symmetry_dataset:10: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/symmetry/analyzer.py:docstring of pymatgen.symmetry.analyzer.SpacegroupAnalyzer.get_symmetry_dataset:15: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/symmetry/analyzer.py:docstring of pymatgen.symmetry.analyzer.iterative_symmetrize:22: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/symmetry/analyzer.py:docstring of pymatgen.symmetry.analyzer.iterative_symmetrize:23: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/symmetry/groups.py:docstring of pymatgen.symmetry.groups.PointGroup.symmetry_ops:1: WARNING: duplicate object description of pymatgen.symmetry.groups.PointGroup.symmetry_ops, other instance in pymatgen.symmetry, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/symmetry/kpath.py:docstring of pymatgen.symmetry.kpath.KPathLatimerMunro:15: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/symmetry/kpath.py:docstring of pymatgen.symmetry.kpath.KPathLatimerMunro:16: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/symmetry/maggroups.py:docstring of pymatgen.symmetry.maggroups.MagneticSpaceGroup:53: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/symmetry/maggroups.py:docstring of pymatgen.symmetry.maggroups.MagneticSpaceGroup:54: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/transformations/advanced_transformations.py:docstring of pymatgen.transformations.advanced_transformations.GrainBoundaryTransformation:34: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/transformations/advanced_transformations.py:docstring of pymatgen.transformations.advanced_transformations.GrainBoundaryTransformation:35: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/transformations/advanced_transformations.py:docstring of pymatgen.transformations.advanced_transformations.SQSTransformation:6: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/transformations/advanced_transformations.py:docstring of pymatgen.transformations.advanced_transformations.SQSTransformation:7: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/util/graph_hashing.py:docstring of pymatgen.util.graph_hashing.weisfeiler_lehman_graph_hash:45: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/util/graph_hashing.py:docstring of pymatgen.util.graph_hashing.weisfeiler_lehman_subgraph_hashes:68: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/util/graph_hashing.py:docstring of pymatgen.util.graph_hashing.weisfeiler_lehman_subgraph_hashes:69: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/util/plotting.py:docstring of pymatgen.util.plotting.van_arkel_triangle:5: ERROR: Unexpected indentation. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/util/plotting.py:docstring of pymatgen.util.plotting.van_arkel_triangle:7: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/util/provenance.py:docstring of pymatgen.util.provenance.HistoryNode.description:1: WARNING: duplicate object description of pymatgen.util.provenance.HistoryNode.description, other instance in pymatgen.util, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/util/provenance.py:docstring of pymatgen.util.provenance.HistoryNode.name:1: WARNING: duplicate object description of pymatgen.util.provenance.HistoryNode.name, other instance in pymatgen.util, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/util/provenance.py:docstring of pymatgen.util.provenance.HistoryNode.url:1: WARNING: duplicate object description of pymatgen.util.provenance.HistoryNode.url, other instance in pymatgen.util, use :no-index: for one of them /build/reproducible-path/pymatgen-2024.10.29+dfsg1/docs/apidoc/pymatgen.util.rst:29: ERROR: Unknown target name: "int". /build/reproducible-path/pymatgen-2024.10.29+dfsg1/docs/apidoc/pymatgen.util.rst:29: ERROR: Unknown target name: "float". /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/util/graph_hashing.py:docstring of pymatgen.util.graph_hashing.weisfeiler_lehman_graph_hash:7: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/util/graph_hashing.py:docstring of pymatgen.util.graph_hashing.weisfeiler_lehman_subgraph_hashes:23: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/util/graph_hashing.py:docstring of pymatgen.util.graph_hashing.weisfeiler_lehman_subgraph_hashes:23: ERROR: Unknown target name: "2". /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/util/graph_hashing.py:docstring of pymatgen.util.graph_hashing.weisfeiler_lehman_subgraph_hashes:28: ERROR: Duplicate target name, cannot be used as a unique reference: "1". looking for now-outdated files... none found pickling environment... done checking consistency... /build/reproducible-path/pymatgen-2024.10.29+dfsg1/docs/apidoc/modules.rst: WARNING: document isn't included in any toctree /build/reproducible-path/pymatgen-2024.10.29+dfsg1/docs/apidoc/pymatgen.alchemy.rst: document is referenced in multiple toctrees: ['index', 'pymatgen'], selecting: pymatgen <- pymatgen.alchemy /build/reproducible-path/pymatgen-2024.10.29+dfsg1/docs/apidoc/pymatgen.analysis.rst: document is referenced in multiple toctrees: ['index', 'pymatgen'], selecting: pymatgen <- pymatgen.analysis /build/reproducible-path/pymatgen-2024.10.29+dfsg1/docs/apidoc/pymatgen.apps.rst: document is referenced in multiple toctrees: ['index', 'pymatgen'], selecting: pymatgen <- pymatgen.apps /build/reproducible-path/pymatgen-2024.10.29+dfsg1/docs/apidoc/pymatgen.cli.rst: document is referenced in multiple toctrees: ['index', 'pymatgen'], selecting: pymatgen <- pymatgen.cli /build/reproducible-path/pymatgen-2024.10.29+dfsg1/docs/apidoc/pymatgen.command_line.rst: document is referenced in multiple toctrees: ['index', 'pymatgen'], selecting: pymatgen <- pymatgen.command_line /build/reproducible-path/pymatgen-2024.10.29+dfsg1/docs/apidoc/pymatgen.core.rst: document is referenced in multiple toctrees: ['index', 'pymatgen'], selecting: pymatgen <- pymatgen.core /build/reproducible-path/pymatgen-2024.10.29+dfsg1/docs/apidoc/pymatgen.electronic_structure.rst: document is referenced in multiple toctrees: ['index', 'pymatgen'], selecting: pymatgen <- pymatgen.electronic_structure /build/reproducible-path/pymatgen-2024.10.29+dfsg1/docs/apidoc/pymatgen.entries.rst: document is referenced in multiple toctrees: ['index', 'pymatgen'], selecting: pymatgen <- pymatgen.entries /build/reproducible-path/pymatgen-2024.10.29+dfsg1/docs/apidoc/pymatgen.ext.rst: document is referenced in multiple toctrees: ['index', 'pymatgen'], selecting: pymatgen <- pymatgen.ext /build/reproducible-path/pymatgen-2024.10.29+dfsg1/docs/apidoc/pymatgen.io.rst: document is referenced in multiple toctrees: ['index', 'pymatgen'], selecting: pymatgen <- pymatgen.io /build/reproducible-path/pymatgen-2024.10.29+dfsg1/docs/apidoc/pymatgen.optimization.rst: document is referenced in multiple toctrees: ['index', 'pymatgen'], selecting: pymatgen <- pymatgen.optimization /build/reproducible-path/pymatgen-2024.10.29+dfsg1/docs/apidoc/pymatgen.phonon.rst: document is referenced in multiple toctrees: ['index', 'pymatgen'], selecting: pymatgen <- pymatgen.phonon /build/reproducible-path/pymatgen-2024.10.29+dfsg1/docs/apidoc/pymatgen.symmetry.rst: document is referenced in multiple toctrees: ['index', 'pymatgen'], selecting: pymatgen <- pymatgen.symmetry /build/reproducible-path/pymatgen-2024.10.29+dfsg1/docs/apidoc/pymatgen.transformations.rst: document is referenced in multiple toctrees: ['index', 'pymatgen'], selecting: pymatgen <- pymatgen.transformations /build/reproducible-path/pymatgen-2024.10.29+dfsg1/docs/apidoc/pymatgen.util.rst: document is referenced in multiple toctrees: ['index', 'pymatgen'], selecting: pymatgen <- pymatgen.util /build/reproducible-path/pymatgen-2024.10.29+dfsg1/docs/apidoc/pymatgen.vis.rst: document is referenced in multiple toctrees: ['index', 'pymatgen'], selecting: pymatgen <- pymatgen.vis done preparing documents... WARNING: unsupported theme option 'display_version' given done copying assets... copying static files... done copying extra files... done copying assets: done writing output... [ 2%] index writing output... [ 4%] modules writing output... [ 6%] pymatgen writing output... [ 8%] pymatgen.alchemy writing output... [ 10%] pymatgen.analysis writing output... [ 12%] pymatgen.analysis.chemenv writing output... [ 14%] pymatgen.analysis.chemenv.connectivity writing output... [ 16%] pymatgen.analysis.chemenv.coordination_environments writing output... [ 18%] pymatgen.analysis.chemenv.coordination_environments.coordination_geometries_files writing output... [ 20%] pymatgen.analysis.chemenv.utils writing output... [ 22%] pymatgen.analysis.diffraction writing output... [ 24%] pymatgen.analysis.elasticity writing output... [ 27%] pymatgen.analysis.ferroelectricity writing output... [ 29%] pymatgen.analysis.gb writing output... [ 31%] pymatgen.analysis.interfaces writing output... [ 33%] pymatgen.analysis.magnetism writing output... [ 35%] pymatgen.analysis.solar writing output... [ 37%] pymatgen.analysis.structure_prediction writing output... [ 39%] pymatgen.analysis.topological writing output... [ 41%] pymatgen.analysis.xas writing output... [ 43%] pymatgen.apps writing output... [ 45%] pymatgen.apps.battery writing output... [ 47%] pymatgen.apps.borg writing output... [ 49%] pymatgen.cli writing output... [ 51%] pymatgen.command_line writing output... [ 53%] pymatgen.core writing output... [ 55%] pymatgen.electronic_structure writing output... [ 57%] pymatgen.entries writing output... [ 59%] pymatgen.ext writing output... [ 61%] pymatgen.io writing output... [ 63%] pymatgen.io.abinit writing output... [ 65%] pymatgen.io.aims writing output... [ 67%] pymatgen.io.aims.sets writing output... [ 69%] pymatgen.io.cp2k writing output... [ 71%] pymatgen.io.exciting writing output... [ 73%] pymatgen.io.feff writing output... [ 76%] pymatgen.io.lammps writing output... [ 78%] pymatgen.io.lobster writing output... [ 80%] pymatgen.io.pwmat writing output... [ 82%] pymatgen.io.qchem writing output... [ 84%] pymatgen.io.vasp writing output... [ 86%] pymatgen.io.xtb writing output... [ 88%] pymatgen.optimization writing output... [ 90%] pymatgen.phonon writing output... [ 92%] pymatgen.symmetry writing output... [ 94%] pymatgen.transformations writing output... [ 96%] pymatgen.util writing output... [ 98%] pymatgen.util.testing writing output... [100%] pymatgen.vis /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/electronic_structure/dos.py:docstring of pymatgen.electronic_structure.dos.CompleteDos:1: WARNING: more than one target found for cross-reference 'Orbital': pymatgen.electronic_structure.core.Orbital, pymatgen.io.vasp.inputs.Orbital /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/electronic_structure/dos.py:docstring of pymatgen.electronic_structure.dos.CompleteDos:16: WARNING: more than one target found for cross-reference 'Orbital': pymatgen.electronic_structure.core.Orbital, pymatgen.io.vasp.inputs.Orbital /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/electronic_structure/dos.py:docstring of pymatgen.electronic_structure.dos.CompleteDos.get_site_orbital_dos:1: WARNING: more than one target found for cross-reference 'Orbital': pymatgen.electronic_structure.core.Orbital, pymatgen.io.vasp.inputs.Orbital /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/electronic_structure/dos.py:docstring of pymatgen.electronic_structure.dos.LobsterCompleteDos:1: WARNING: more than one target found for cross-reference 'Orbital': pymatgen.electronic_structure.core.Orbital, pymatgen.io.vasp.inputs.Orbital /build/reproducible-path/pymatgen-2024.10.29+dfsg1/docs/apidoc/pymatgen.io.cp2k.rst:29: WARNING: more than one target found for cross-reference 'Kpoints': pymatgen.io.cp2k.inputs.Kpoints, pymatgen.io.vasp.inputs.Kpoints /build/reproducible-path/pymatgen-2024.10.29+dfsg1/docs/apidoc/pymatgen.io.cp2k.rst:29: WARNING: more than one target found for cross-reference 'Kpoints': pymatgen.io.cp2k.inputs.Kpoints, pymatgen.io.vasp.inputs.Kpoints /build/reproducible-path/pymatgen-2024.10.29+dfsg1/docs/apidoc/pymatgen.io.cp2k.rst:29: WARNING: more than one target found for cross-reference 'Kpoints': pymatgen.io.cp2k.inputs.Kpoints, pymatgen.io.vasp.inputs.Kpoints /build/reproducible-path/pymatgen-2024.10.29+dfsg1/docs/apidoc/pymatgen.io.cp2k.rst:29: WARNING: more than one target found for cross-reference 'Kpoints': pymatgen.io.cp2k.inputs.Kpoints, pymatgen.io.vasp.inputs.Kpoints /build/reproducible-path/pymatgen-2024.10.29+dfsg1/docs/apidoc/pymatgen.io.cp2k.rst:29: WARNING: more than one target found for cross-reference 'Kpoints': pymatgen.io.cp2k.inputs.Kpoints, pymatgen.io.vasp.inputs.Kpoints /build/reproducible-path/pymatgen-2024.10.29+dfsg1/docs/apidoc/pymatgen.io.cp2k.rst:29: WARNING: more than one target found for cross-reference 'Kpoints': pymatgen.io.cp2k.inputs.Kpoints, pymatgen.io.vasp.inputs.Kpoints /build/reproducible-path/pymatgen-2024.10.29+dfsg1/docs/apidoc/pymatgen.io.cp2k.rst:29: WARNING: more than one target found for cross-reference 'Kpoints': pymatgen.io.cp2k.inputs.Kpoints, pymatgen.io.vasp.inputs.Kpoints /build/reproducible-path/pymatgen-2024.10.29+dfsg1/docs/apidoc/pymatgen.io.lobster.rst:29: WARNING: more than one target found for cross-reference 'Orbital': pymatgen.electronic_structure.core.Orbital, pymatgen.io.vasp.inputs.Orbital /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/vasp/outputs.py:docstring of pymatgen.io.vasp.outputs.Vasprun:129: WARNING: more than one target found for cross-reference 'Kpoints': pymatgen.io.cp2k.inputs.Kpoints, pymatgen.io.vasp.inputs.Kpoints /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/vasp/outputs.py:docstring of pymatgen.io.vasp.outputs.Vasprun.get_band_structure:1: WARNING: more than one target found for cross-reference 'BandStructure': pymatgen.electronic_structure.bandstructure.BandStructure, pymatgen.io.cp2k.inputs.BandStructure /build/reproducible-path/pymatgen-2024.10.29+dfsg1/docs/apidoc/pymatgen.io.vasp.rst:45: WARNING: more than one target found for cross-reference 'Kpoints': pymatgen.io.cp2k.inputs.Kpoints, pymatgen.io.vasp.inputs.Kpoints /build/reproducible-path/pymatgen-2024.10.29+dfsg1/docs/apidoc/pymatgen.io.vasp.rst:45: WARNING: more than one target found for cross-reference 'Kpoints': pymatgen.io.cp2k.inputs.Kpoints, pymatgen.io.vasp.inputs.Kpoints /build/reproducible-path/pymatgen-2024.10.29+dfsg1/docs/apidoc/pymatgen.io.vasp.rst:45: WARNING: more than one target found for cross-reference 'Kpoints': pymatgen.io.cp2k.inputs.Kpoints, pymatgen.io.vasp.inputs.Kpoints /build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/cpython3_3.12_pymatgen/build/pymatgen/io/vasp/sets.py:docstring of pymatgen.io.vasp.sets.VaspInputSet.prev_kpoints:1: WARNING: more than one target found for cross-reference 'Kpoints': pymatgen.io.cp2k.inputs.Kpoints, pymatgen.io.vasp.inputs.Kpoints generating indices... genindex py-modindex done writing additional pages... search done dumping search index in English (code: en)... done dumping object inventory... done build succeeded, 649 warnings. The HTML pages are in build/html. make[1]: Leaving directory '/build/reproducible-path/pymatgen-2024.10.29+dfsg1' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/pymatgen-2024.10.29+dfsg1' py=`py3versions --default -v`; \ pybuilddir=`pybuild --pyver $py --print build_dir | awk '{print $3}'`; \ testdir=/build/reproducible-path/pymatgen-2024.10.29+dfsg1/.pybuild/test_python$py; \ cp -a $pybuilddir $testdir; \ cp -a tests $testdir; \ SKIP_TESTS=""; \ list_initialised=0; \ for t in test_matproj TestGenKpt TestHighSymmetryPoint test_from_multi_jobs_file test_from_string test_read_molecule test_read_nbo test_read_negative test_read_plots test_read_write_nbo7 test_all test_custom_smd_write test_sets test_CifWriter test_read_write test_init test_get_site_symmetries BSDOSPlotterTest test_cdft_dc_parsing test_get_structure_by_id test_babel_PC_with_RO_depth_0_vs_depth_10 test_fit test_get_parchg test_numerical_eoswrapper "(TestAnharmonicQuasiharmociDebyeApprox and test_gruneisen_parameter)" plot test_structure_environments test_pca test_get_info_cohps_to_neighbors test_get_parchg test_as_dict_from_dict test_ir_spectra; do \ if [ ${list_initialised} = 0 ]; then \ SKIP_TESTS=$t; \ list_initialised=1; \ else \ SKIP_TESTS="${SKIP_TESTS} or $t"; \ fi; \ done; \ if [ "x${SKIP_TESTS}" != "x" ]; then \ SKIP_TESTS="not ( ${SKIP_TESTS} )"; \ fi; \ echo "skipping tests: ${SKIP_TESTS}"; \ PMG_TEST_FILES_DIR=/usr/share/doc/pymatgen-test-files/examples/files \ PYTHONPATH=$testdir PATH=$pybuilddir/../scripts:$PATH \ pytest-3 -v --import-mode=prepend --color=no -k "${SKIP_TESTS}" $testdir; \ skipping tests: not ( test_matproj or TestGenKpt or TestHighSymmetryPoint or test_from_multi_jobs_file or test_from_string or test_read_molecule or test_read_nbo or test_read_negative or test_read_plots or test_read_write_nbo7 or test_all or test_custom_smd_write or test_sets or test_CifWriter or test_read_write or test_init or test_get_site_symmetries or BSDOSPlotterTest or test_cdft_dc_parsing or test_get_structure_by_id or test_babel_PC_with_RO_depth_0_vs_depth_10 or test_fit or test_get_parchg or test_numerical_eoswrapper or (TestAnharmonicQuasiharmociDebyeApprox and test_gruneisen_parameter) or plot or test_structure_environments or test_pca or test_get_info_cohps_to_neighbors or test_get_parchg or test_as_dict_from_dict or test_ir_spectra ) ============================= test session starts ============================== platform linux -- Python 3.12.7, pytest-8.3.3, pluggy-1.5.0 rootdir: /build/reproducible-path/pymatgen-2024.10.29+dfsg1 configfile: pyproject.toml plugins: typeguard-4.4.1 collected 2950 items / 385 deselected / 7 skipped / 2565 selected .pybuild/test_python3.12/tests/alchemy/test_filters.py ....... 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[100%] ============================= slowest 30 durations ============================= 43.92s call .pybuild/test_python3.12/tests/transformations/test_advanced_transformations.py::TestCubicSupercellTransformation::test_apply_transformation_orthorhombic_supercell 41.65s call .pybuild/test_python3.12/tests/analysis/test_fragmenter.py::TestFragmentMolecule::test_pc_then_ec_depth_10 29.72s call .pybuild/test_python3.12/tests/analysis/elasticity/test_elastic.py::TestElasticTensorExpansion::test_get_yield_stress 27.65s call .pybuild/test_python3.12/tests/io/vasp/test_optics.py::TestVasprun::test_optics 26.67s call .pybuild/test_python3.12/tests/symmetry/test_kpath_lm.py::TestKPathLatimerMunro::test_kpath_generation 22.04s call .pybuild/test_python3.12/tests/core/test_tensors.py::TestTensor::test_populate 19.66s call .pybuild/test_python3.12/tests/analysis/topological/test_spillage.py::TestSolar::test_spillage_from_vasprun 18.84s call .pybuild/test_python3.12/tests/analysis/test_transition_state.py::TestNEBAnalysis::test_run 17.30s call .pybuild/test_python3.12/tests/core/test_surface.py::TestSlab::test_symmetrization 16.83s call .pybuild/test_python3.12/tests/core/test_surface.py::TestSlabGenerator::test_non_stoichiometric_symmetrized_slab 16.03s call .pybuild/test_python3.12/tests/analysis/test_structure_analyzer.py::TestMiscFunction::test_average_coordination_number 15.94s call .pybuild/test_python3.12/tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_average_gruneisen 14.53s call .pybuild/test_python3.12/tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_acoustic_debye_temp 14.28s call .pybuild/test_python3.12/tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_thermal_conductivity_slack 13.89s call .pybuild/test_python3.12/tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_phdos 13.74s call .pybuild/test_python3.12/tests/symmetry/test_kpath_sc.py::TestBandStructureSC::test_kpath_generation 13.56s call .pybuild/test_python3.12/tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_tdos 13.55s call .pybuild/test_python3.12/tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_frequencies 13.46s call .pybuild/test_python3.12/tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_debye_temp_phonopy 13.42s call .pybuild/test_python3.12/tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_multi 13.42s call .pybuild/test_python3.12/tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_gruneisen 13.41s call .pybuild/test_python3.12/tests/io/test_phonopy.py::TestGruneisen::test_gruneisen_parameter 13.28s call .pybuild/test_python3.12/tests/phonon/test_gruneisen.py::TestGruneisenParameter::test_as_from_dict 12.63s call .pybuild/test_python3.12/tests/io/vasp/test_outputs.py::TestVasprun::test_runtype 12.13s call .pybuild/test_python3.12/tests/io/test_packmol.py::TestPackmolSet::test_chdir_behavior 11.56s call .pybuild/test_python3.12/tests/analysis/test_bond_dissociation.py::TestBondDissociation::test_ec_neg_pcm_40 11.35s call .pybuild/test_python3.12/tests/analysis/elasticity/test_elastic.py::TestElasticTensorExpansion::test_from_diff_fit 11.03s call .pybuild/test_python3.12/tests/analysis/test_adsorption.py::TestAdsorbateSiteFinder::test_generate_substitution_structures 10.85s call .pybuild/test_python3.12/tests/analysis/elasticity/test_elastic.py::TestElasticTensorExpansion::test_thermal_expansion_coeff 10.71s call .pybuild/test_python3.12/tests/analysis/elasticity/test_elastic.py::TestElasticTensorExpansion::test_gruneisen =========================== short test summary info ============================ SKIPPED [1] .pybuild/test_python3.12/tests/electronic_structure/test_boltztrap2.py:27: No boltztrap2 SKIPPED [1] .pybuild/test_python3.12/tests/ext/test_cod.py:25: www.crystallography.net is 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SKIPPED [1] .pybuild/test_python3.12/tests/command_line/test_mcsqs_caller.py:67: mcsqs executable not present SKIPPED [1] .pybuild/test_python3.12/tests/command_line/test_mcsqs_caller.py:101: mcsqs executable not present SKIPPED [1] .pybuild/test_python3.12/tests/command_line/test_mcsqs_caller.py:28: mcsqs executable not present SKIPPED [1] .pybuild/test_python3.12/tests/command_line/test_mcsqs_caller.py:51: mcsqs executable not present SKIPPED [1] .pybuild/test_python3.12/tests/command_line/test_mcsqs_caller.py:59: mcsqs executable not present SKIPPED [1] .pybuild/test_python3.12/tests/command_line/test_mcsqs_caller.py:77: mcsqs executable not present SKIPPED [1] .pybuild/test_python3.12/tests/command_line/test_mcsqs_caller.py:89: mcsqs executable not present SKIPPED [1] .pybuild/test_python3.12/tests/command_line/test_vampire_caller.py:34: vampire executable not present SKIPPED [1] .pybuild/test_python3.12/tests/core/test_structure.py:712: Only run this in CI tests SKIPPED [1] .pybuild/test_python3.12/tests/core/test_structure.py:105: enumlib or mcsqs executable not present SKIPPED [1] .pybuild/test_python3.12/tests/core/test_structure.py:1832: chgnet is failing with Numpy 1, see #3992 SKIPPED [1] .pybuild/test_python3.12/tests/core/test_structure.py:1904: TODO: #3958 wait for matgl resolve of torch dependency SKIPPED [1] .pybuild/test_python3.12/tests/core/test_structure.py:985: PMG_MAPI_KEY environment variable not set or MP API is down. This is also the case in a PR. SKIPPED [1] .pybuild/test_python3.12/tests/core/test_structure.py:1807: chgnet is failing with Numpy 1, see #3992 SKIPPED [1] .pybuild/test_python3.12/tests/core/test_structure.py:1916: TODO: #3958 wait for matgl resolve of torch dependency SKIPPED [1] .pybuild/test_python3.12/tests/core/test_structure.py:1927: TODO: #3958 wait for matgl resolve of torch dependency SKIPPED [1] .pybuild/test_python3.12/tests/core/test_structure.py:1936: TODO: #3958 wait for matgl resolve of torch dependency SKIPPED [1] .pybuild/test_python3.12/tests/core/test_structure.py:2567: could not import 'tblite': No module named 'tblite' SKIPPED [1] .pybuild/test_python3.12/tests/core/test_structure.py:2575: Pytorch and TBLite clash. https://github.com/materialsproject/pymatgen/pull/3060 SKIPPED [1] .pybuild/test_python3.12/tests/core/test_surface.py:700: This test relies on neighbor orders and is hard coded. Disable temporarily SKIPPED [1] .pybuild/test_python3.12/tests/core/test_xcfunc.py:56: TODO: SKIPPED [1] .pybuild/test_python3.12/tests/electronic_structure/test_boltztrap.py:252: No x_trans. SKIPPED [1] .pybuild/test_python3.12/tests/electronic_structure/test_boltztrap.py:219: No x_trans. SKIPPED [1] .pybuild/test_python3.12/tests/electronic_structure/test_boltztrap.py:239: No x_trans. SKIPPED [1] .pybuild/test_python3.12/tests/electronic_structure/test_boltztrap.py:167: No x_trans. SKIPPED [1] .pybuild/test_python3.12/tests/electronic_structure/test_boltztrap.py:197: No x_trans. SKIPPED [1] .pybuild/test_python3.12/tests/electronic_structure/test_boltztrap.py:230: No x_trans. SKIPPED [1] .pybuild/test_python3.12/tests/electronic_structure/test_boltztrap.py:99: No FDINT SKIPPED [1] .pybuild/test_python3.12/tests/electronic_structure/test_boltztrap.py:121: No x_trans. SKIPPED [1] .pybuild/test_python3.12/tests/electronic_structure/test_boltztrap.py:201: No x_trans. 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SKIPPED [1] .pybuild/test_python3.12/tests/ext/test_optimade.py:93: OPTIMADE providers list is down. SKIPPED [1] .pybuild/test_python3.12/tests/io/test_cif.py:292: non-free PF*.cif test files are not available SKIPPED [1] .pybuild/test_python3.12/tests/io/test_jarvis.py:12: JARVIS-tools not loaded. SKIPPED [1] .pybuild/test_python3.12/tests/io/test_jarvis.py:20: JARVIS-tools not loaded. SKIPPED [1] .pybuild/test_python3.12/tests/io/vasp/test_help.py:22: www.vasp.at is down SKIPPED [1] .pybuild/test_python3.12/tests/io/vasp/test_help.py:31: www.vasp.at is down SKIPPED [1] .pybuild/test_python3.12/tests/io/vasp/test_help.py:37: www.vasp.at is down SKIPPED [1] .pybuild/test_python3.12/tests/io/vasp/test_inputs.py:1469: TODO: need someone to fix this SKIPPED [1] .pybuild/test_python3.12/tests/symmetry/test_kpaths.py:21: No seek path present. SKIPPED [1] .pybuild/test_python3.12/tests/transformations/test_advanced_transformations.py:97: enum_lib not present. 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SKIPPED [1] .pybuild/test_python3.12/tests/transformations/test_advanced_transformations.py:326: enum_lib not present. SKIPPED [1] .pybuild/test_python3.12/tests/transformations/test_advanced_transformations.py:344: enum_lib not present. SKIPPED [1] .pybuild/test_python3.12/tests/transformations/test_advanced_transformations.py:484: enum_lib not present. SKIPPED [1] .pybuild/test_python3.12/tests/transformations/test_advanced_transformations.py:532: enum_lib not present. SKIPPED [1] .pybuild/test_python3.12/tests/transformations/test_advanced_transformations.py:541: enum_lib not present. SKIPPED [1] .pybuild/test_python3.12/tests/transformations/test_advanced_transformations.py:599: mcsqs not present. SKIPPED [1] .pybuild/test_python3.12/tests/transformations/test_advanced_transformations.py:609: mcsqs not present. SKIPPED [1] .pybuild/test_python3.12/tests/transformations/test_advanced_transformations.py:630: mcsqs not present. SKIPPED [1] .pybuild/test_python3.12/tests/transformations/test_advanced_transformations.py:662: icet not installed. SKIPPED [1] .pybuild/test_python3.12/tests/transformations/test_advanced_transformations.py:648: icet not installed. SKIPPED [1] .pybuild/test_python3.12/tests/transformations/test_advanced_transformations.py:673: icet not installed. SKIPPED [1] .pybuild/test_python3.12/tests/transformations/test_advanced_transformations.py:866: hiphive not present SKIPPED [1] .pybuild/test_python3.12/tests/transformations/test_site_transformations.py:213: enum_lib not present. SKIPPED [1] .pybuild/test_python3.12/tests/transformations/test_standard_transformations.py:227: enum_lib not present. SKIPPED [1] .pybuild/test_python3.12/tests/transformations/test_standard_transformations.py:244: enum_lib not present. SKIPPED [1] .pybuild/test_python3.12/tests/transformations/test_standard_transformations.py:262: enum_lib not present. SKIPPED [1] .pybuild/test_python3.12/tests/transformations/test_standard_transformations.py:268: enum_lib not present. ======== 2447 passed, 125 skipped, 385 deselected in 1277.10s (0:21:17) ======== ..tot conformations = 3 ..tot confs tested = 3 ..below energy threshold = 3 make[1]: Leaving directory '/build/reproducible-path/pymatgen-2024.10.29+dfsg1' create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install -O--buildsystem=pybuild I: pybuild plugin_pyproject:178: Copying package built for python3.12 to destdir dh_installdocs -O--buildsystem=pybuild dh_installdocs: warning: Cannot auto-detect main package for python-pymatgen-doc. If the default is wrong, please use --doc-main-package dh_sphinxdoc -i -O--buildsystem=pybuild dh_installchangelogs -O--buildsystem=pybuild dh_installman -O--buildsystem=pybuild dh_python3 -O--buildsystem=pybuild I: dh_python3 pydist:339: Ignoring complex environment marker: boltztrap2>=24.9.4; platform_system != "Windows" and extra == "optional" I: dh_python3 pydist:339: Ignoring complex environment marker: tblite[ase]>=0.3.0; (platform_system == "Linux" and python_version < "3.12") and extra == "optional" I: dh_python3 pydist:339: Ignoring complex environment marker: tblite[ase]>=0.3.0; python_version < "3.12" and extra == "tblite" debian/rules execute_after_dh_python3 make[1]: Entering directory '/build/reproducible-path/pymatgen-2024.10.29+dfsg1' dh_numpy3 make[1]: Leaving directory '/build/reproducible-path/pymatgen-2024.10.29+dfsg1' dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild dh_fixperms -O--buildsystem=pybuild dh_missing -O--buildsystem=pybuild dh_dwz -a -O--buildsystem=pybuild dh_strip -a -O--buildsystem=pybuild dh_makeshlibs -a -O--buildsystem=pybuild dh_shlibdeps -a -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dpkg-gencontrol: warning: package python-pymatgen-doc: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package python-pymatgen-doc: substitution variable ${sphinxdoc:Built-Using} unused, but is defined dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'python-pymatgen-doc' in '../python-pymatgen-doc_2024.10.29+dfsg1-3_all.deb'. dpkg-deb: building package 'python3-pymatgen-dbgsym' in '../python3-pymatgen-dbgsym_2024.10.29+dfsg1-3_i386.deb'. dpkg-deb: building package 'python3-pymatgen' in '../python3-pymatgen_2024.10.29+dfsg1-3_i386.deb'. dpkg-genbuildinfo --build=binary -O../pymatgen_2024.10.29+dfsg1-3_i386.buildinfo dpkg-genchanges --build=binary -O../pymatgen_2024.10.29+dfsg1-3_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-source: info: using options from pymatgen-2024.10.29+dfsg1/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/30009 and its subdirectories I: Current time: Tue Dec 16 14:29:05 -12 2025 I: pbuilder-time-stamp: 1765938545 Wed Nov 13 20:06:07 UTC 2024 I: 1st build successful. Starting 2nd build on remote node infom07-i386.debian.net. Wed Nov 13 20:06:07 UTC 2024 I: Preparing to do remote build '2' on infom07-i386.debian.net. Wed Nov 13 22:47:10 UTC 2024 I: Deleting $TMPDIR on infom07-i386.debian.net. Wed Nov 13 22:47:10 UTC 2024 I: pymatgen_2024.10.29+dfsg1-3_i386.changes: Format: 1.8 Date: Sun, 10 Nov 2024 10:12:06 +0100 Source: pymatgen Binary: python-pymatgen-doc python3-pymatgen python3-pymatgen-dbgsym Architecture: all i386 Version: 2024.10.29+dfsg1-3 Distribution: unstable Urgency: medium Maintainer: Debichem Team Changed-By: Drew Parsons Description: python-pymatgen-doc - Python Materials Genomics for materials analysis (documentation) python3-pymatgen - Python Materials Genomics for materials analysis Changes: pymatgen (2024.10.29+dfsg1-3) unstable; urgency=medium . * revert and reset debian patch neighbor_set_int64.patch to use intp instead of int64 when creating separation indices * skip test_relax_ase_return_traj on mips64el * skip test_read_fe (abinit/test_netcdf.py) on s390x and ppc64. Is it a bigendian netCDF issue? Assume hppa, powerpc also affected. Checksums-Sha1: 4f27c1d98ab78cd95c3c345967d7d5b302765b03 16739 pymatgen_2024.10.29+dfsg1-3_i386.buildinfo 3511c1f57ac972283e10e1b944f6280316ddcee7 1259292 python-pymatgen-doc_2024.10.29+dfsg1-3_all.deb 9a061791f17d81ffaa2268acac8ccba381d693f3 1162592 python3-pymatgen-dbgsym_2024.10.29+dfsg1-3_i386.deb d252a32c3b7679c8829d270556718baf9d07a337 2527108 python3-pymatgen_2024.10.29+dfsg1-3_i386.deb Checksums-Sha256: 07caa1ad06f195fc4d4b2f1a300ff018850f713b862a645056e48ab090cd3208 16739 pymatgen_2024.10.29+dfsg1-3_i386.buildinfo faa134e3c7fe30adb3cae78448420b62ed10bcecb993749118fa3cf8d504fd7f 1259292 python-pymatgen-doc_2024.10.29+dfsg1-3_all.deb 4bc1933e1ae20df65297cd62e6b88f9528d90970516239d5fb4278f718fba0ba 1162592 python3-pymatgen-dbgsym_2024.10.29+dfsg1-3_i386.deb d9037afb078a62018148d65f1fbe4cf5758df2992996e34e90f5fe43fb65c597 2527108 python3-pymatgen_2024.10.29+dfsg1-3_i386.deb Files: a38a69e2b4cff2d514dcf3b099dc0fc7 16739 python optional pymatgen_2024.10.29+dfsg1-3_i386.buildinfo b78f63919e555b09efd1d27c010d8f47 1259292 doc optional python-pymatgen-doc_2024.10.29+dfsg1-3_all.deb 73e176eb35561218f22e1edc8e6bb1ce 1162592 debug optional python3-pymatgen-dbgsym_2024.10.29+dfsg1-3_i386.deb 952325619b3e13e4caa335c7727f2804 2527108 python optional python3-pymatgen_2024.10.29+dfsg1-3_i386.deb Wed Nov 13 22:47:12 UTC 2024 I: diffoscope 283 will be used to compare the two builds: Running as unit: rb-diffoscope-i386_20-31583.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.Dy4a9LPN/pymatgen_2024.10.29+dfsg1-3.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.Dy4a9LPN/pymatgen_2024.10.29+dfsg1-3.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.Dy4a9LPN/pymatgen_2024.10.29+dfsg1-3.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.Dy4a9LPN/b1/pymatgen_2024.10.29+dfsg1-3_i386.changes /srv/reproducible-results/rbuild-debian/r-b-build.Dy4a9LPN/b2/pymatgen_2024.10.29+dfsg1-3_i386.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.603s) 0.603s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.086s) 0.086s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 1.096s CPU time consumed: 1.074s Wed Nov 13 22:47:14 UTC 2024 I: diffoscope 283 found no differences in the changes files, and a .buildinfo file also exists. Wed Nov 13 22:47:14 UTC 2024 I: pymatgen from trixie built successfully and reproducibly on i386. Wed Nov 13 22:47:15 UTC 2024 I: Submitting .buildinfo files to external archives: Wed Nov 13 22:47:15 UTC 2024 I: Submitting 20K b1/pymatgen_2024.10.29+dfsg1-3_i386.buildinfo.asc Wed Nov 13 22:47:16 UTC 2024 I: Submitting 20K b2/pymatgen_2024.10.29+dfsg1-3_i386.buildinfo.asc Wed Nov 13 22:47:17 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Wed Nov 13 22:47:17 UTC 2024 I: Done submitting .buildinfo files. Wed Nov 13 22:47:17 UTC 2024 I: Removing signed pymatgen_2024.10.29+dfsg1-3_i386.buildinfo.asc files: removed './b1/pymatgen_2024.10.29+dfsg1-3_i386.buildinfo.asc' removed './b2/pymatgen_2024.10.29+dfsg1-3_i386.buildinfo.asc'