Wed Dec 4 20:30:55 UTC 2024 I: starting to build plip/trixie/i386 on jenkins on '2024-12-04 20:30' Wed Dec 4 20:30:55 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_7/50456/console.log Wed Dec 4 20:30:55 UTC 2024 I: Downloading source for trixie/plip=2.3.0+dfsg-2 --2024-12-04 20:30:55-- http://deb.debian.org/debian/pool/main/p/plip/plip_2.3.0%2bdfsg-2.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2086 (2.0K) [text/prs.lines.tag] Saving to: ‘plip_2.3.0+dfsg-2.dsc’ 0K .. 100% 229M=0s 2024-12-04 20:30:55 (229 MB/s) - ‘plip_2.3.0+dfsg-2.dsc’ saved [2086/2086] Wed Dec 4 20:30:55 UTC 2024 I: plip_2.3.0+dfsg-2.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: plip Binary: plip Architecture: all Version: 2.3.0+dfsg-2 Maintainer: Debian Med Packaging Team Uploaders: Alexandre Mestiashvili Homepage: https://projects.biotec.tu-dresden.de/plip-web/plip/ Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/plip Vcs-Git: https://salsa.debian.org/med-team/plip.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), dh-sequence-python3, help2man, python3-all, python3-lxml, python3-numpy, python3-openbabel, python3-setuptools Package-List: plip deb python optional arch=all Checksums-Sha1: a2c59f7bd68ff7b482cb229a3b76f715d3d505bd 79816 plip_2.3.0+dfsg.orig.tar.xz 912d416f3e0e50bf2fea5e170ed1820b5a8f75f6 5772 plip_2.3.0+dfsg-2.debian.tar.xz Checksums-Sha256: 296b22804ce2fb2148da8f43615311d43597bf986c84dc9ab554aedd06bd8c9e 79816 plip_2.3.0+dfsg.orig.tar.xz fd9e64aa4f0c48391f4674d6a2575057c0a4f80c16873b4d9dbf13f48d26be01 5772 plip_2.3.0+dfsg-2.debian.tar.xz Files: 0bb89efad0061dc91a8241e1c12d3960 79816 plip_2.3.0+dfsg.orig.tar.xz 11071238891fdc3af5e41990210ea62b 5772 plip_2.3.0+dfsg-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmWWm8URHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtE9KQ//XDzRnIqtHWscDKd9RuCM7DO9ykgHQCLE PEzrC+2IvB3OIxSEzYYscTNlKRhLO6M0yBKap7gn9jt1cTiWsDIXtkOVNbVzL/Sq hECb6Vvap12BDkYuKg9Z7rnOqUtvbzOqsZRNEycZ12zHhRtHH45MC1aZxcofNCyt oL/p2vN7/gL2xYu43Xb+e77S0G13YQgWM2dPmvJx44QuSJYpTohjIJv2mQwklI9G AvRha6V6IL6/Yz5DDatTmLbsJF0TW1jOMMVkhZj8A6VWVlOUb2FqQAAUjxCsNBvw 6hpnJpU1L6cy2JpMGJd3OP0TgIGDRnSVPNfy+2oLgYOqjmKV1VY9PVxvol4OH0n4 LwhzUgVojo+laO8kEsPfqQ8Okmtul22Lsuss2fbIlzN8a5Va3muPz8hvGpLcv1Dr euva6jmGDRGeaPVnHClFC04N8FD0dm5iN1hlaJ+EV0Inis4IkmD9Aq8i3QoKgWBi nIobsbTYXzRG4bVNf0agm6iMxyyXCqduw9e74+cHet5wMUeZBnkNFWDVCRKDGnUp HYTXJhfA9rmio3xi7QhcAJAdzGmzgcAO1vB9Ffv9S7ny/kZmbriXR+7EMDRaDPAB sfdkds/Qfsm2H61r3fxGA33g6TP3X7qdxlAj7qAlEkzcarQJW3mbiDyxmx7TdKRR 2kBTHkSlrNc= =OBd9 -----END PGP SIGNATURE----- Wed Dec 4 20:30:55 UTC 2024 I: Checking whether the package is not for us Wed Dec 4 20:30:55 UTC 2024 I: Starting 1st build on remote node ionos12-i386.debian.net. Wed Dec 4 20:30:55 UTC 2024 I: Preparing to do remote build '1' on ionos12-i386.debian.net. Wed Dec 4 20:31:53 UTC 2024 I: Deleting $TMPDIR on ionos12-i386.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Wed Dec 4 08:30:57 -12 2024 I: pbuilder-time-stamp: 1733344257 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [plip_2.3.0+dfsg-2.dsc] I: copying [./plip_2.3.0+dfsg.orig.tar.xz] I: copying [./plip_2.3.0+dfsg-2.debian.tar.xz] I: Extracting source gpgv: Signature made Thu Jan 4 11:51:33 2024 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./plip_2.3.0+dfsg-2.dsc: no acceptable signature found dpkg-source: info: extracting plip in plip-2.3.0+dfsg dpkg-source: info: unpacking plip_2.3.0+dfsg.orig.tar.xz dpkg-source: info: unpacking plip_2.3.0+dfsg-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying revert_imagemagick_changes.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/49409/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=11 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='2cd3fe7929544deaa0e3dfd45d01550d' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='49409' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.jhhv0Osx/pbuilderrc_IeXw --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.jhhv0Osx/b1 --logfile b1/build.log plip_2.3.0+dfsg-2.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://46.16.76.132:3128' I: uname -a Linux ionos12-i386 6.1.0-28-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.119-1 (2024-11-22) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin I: user script /srv/workspace/pbuilder/49409/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-sequence-python3, help2man, python3-all, python3-lxml, python3-numpy, python3-openbabel, python3-setuptools dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19956 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on help2man; however: Package help2man is not installed. pbuilder-satisfydepends-dummy depends on python3-all; however: Package python3-all is not installed. pbuilder-satisfydepends-dummy depends on python3-lxml; however: Package python3-lxml is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy; however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-openbabel; however: Package python3-openbabel is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} gettext{a} gettext-base{a} groff-base{a} help2man{a} intltool-debian{a} libarchive-zip-perl{a} libblas3{a} libbrotli1{a} libcairo2{a} libcom-err2{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype6{a} libgfortran5{a} libgssapi-krb5-2{a} libicu72{a} libinchi1.07{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} liblocale-gettext-perl{a} libmaeparser1{a} libmagic-mgc{a} libmagic1t64{a} libnsl2{a} libopenbabel7{a} libpipeline1{a} libpixman-1-0{a} libpng16-16t64{a} libpython3-stdlib{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.12t64{a} libreadline8t64{a} libtirpc-common{a} libtirpc3t64{a} libtool{a} libuchardet0{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxml2{a} libxrender1{a} libxslt1.1{a} m4{a} man-db{a} media-types{a} netbase{a} po-debconf{a} python3{a} python3-all{a} python3-autocommand{a} python3-inflect{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-lxml{a} python3-minimal{a} python3-more-itertools{a} python3-numpy{a} python3-openbabel{a} python3-pkg-resources{a} python3-setuptools{a} python3-typeguard{a} python3-typing-extensions{a} python3-zipp{a} python3.12{a} python3.12-minimal{a} readline-common{a} sensible-utils{a} tzdata{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl krb5-locales libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx python3-bs4 python3-cssselect python3-html5lib wget 0 packages upgraded, 94 newly installed, 0 to remove and 0 not upgraded. Need to get 50.9 MB of archives. After unpacking 213 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main i386 liblocale-gettext-perl i386 1.07-7+b1 [15.4 kB] Get: 2 http://deb.debian.org/debian trixie/main i386 libpython3.12-minimal i386 3.12.7-3 [814 kB] Get: 3 http://deb.debian.org/debian trixie/main i386 libexpat1 i386 2.6.4-1 [107 kB] Get: 4 http://deb.debian.org/debian trixie/main i386 python3.12-minimal i386 3.12.7-3 [2236 kB] Get: 5 http://deb.debian.org/debian trixie/main i386 python3-minimal i386 3.12.6-1 [26.7 kB] Get: 6 http://deb.debian.org/debian trixie/main i386 media-types all 10.1.0 [26.9 kB] Get: 7 http://deb.debian.org/debian trixie/main i386 netbase all 6.4 [12.8 kB] Get: 8 http://deb.debian.org/debian trixie/main i386 tzdata all 2024b-3 [255 kB] Get: 9 http://deb.debian.org/debian trixie/main i386 libkrb5support0 i386 1.21.3-3 [34.9 kB] Get: 10 http://deb.debian.org/debian trixie/main i386 libcom-err2 i386 1.47.1-1+b1 [23.4 kB] Get: 11 http://deb.debian.org/debian trixie/main i386 libk5crypto3 i386 1.21.3-3 [83.6 kB] Get: 12 http://deb.debian.org/debian trixie/main i386 libkeyutils1 i386 1.6.3-4 [9600 B] Get: 13 http://deb.debian.org/debian trixie/main i386 libkrb5-3 i386 1.21.3-3 [350 kB] Get: 14 http://deb.debian.org/debian trixie/main i386 libgssapi-krb5-2 i386 1.21.3-3 [146 kB] Get: 15 http://deb.debian.org/debian trixie/main i386 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get: 16 http://deb.debian.org/debian trixie/main i386 libtirpc3t64 i386 1.3.4+ds-1.3+b1 [90.5 kB] Get: 17 http://deb.debian.org/debian trixie/main i386 libnsl2 i386 1.3.0-3+b3 [42.7 kB] Get: 18 http://deb.debian.org/debian trixie/main i386 readline-common all 8.2-5 [69.3 kB] Get: 19 http://deb.debian.org/debian trixie/main i386 libreadline8t64 i386 8.2-5 [173 kB] Get: 20 http://deb.debian.org/debian trixie/main i386 libpython3.12-stdlib i386 3.12.7-3 [1964 kB] Get: 21 http://deb.debian.org/debian trixie/main i386 python3.12 i386 3.12.7-3 [671 kB] Get: 22 http://deb.debian.org/debian trixie/main i386 libpython3-stdlib i386 3.12.6-1 [9692 B] Get: 23 http://deb.debian.org/debian trixie/main i386 python3 i386 3.12.6-1 [27.8 kB] Get: 24 http://deb.debian.org/debian trixie/main i386 sensible-utils all 0.0.24 [24.8 kB] Get: 25 http://deb.debian.org/debian trixie/main i386 libmagic-mgc i386 1:5.45-3+b1 [314 kB] Get: 26 http://deb.debian.org/debian trixie/main i386 libmagic1t64 i386 1:5.45-3+b1 [115 kB] Get: 27 http://deb.debian.org/debian trixie/main i386 file i386 1:5.45-3+b1 [43.2 kB] Get: 28 http://deb.debian.org/debian trixie/main i386 gettext-base i386 0.22.5-2 [201 kB] Get: 29 http://deb.debian.org/debian trixie/main i386 libuchardet0 i386 0.0.8-1+b2 [69.2 kB] Get: 30 http://deb.debian.org/debian trixie/main i386 groff-base i386 1.23.0-5 [1196 kB] Get: 31 http://deb.debian.org/debian trixie/main i386 bsdextrautils i386 2.40.2-11 [95.6 kB] Get: 32 http://deb.debian.org/debian trixie/main i386 libpipeline1 i386 1.5.8-1 [41.2 kB] Get: 33 http://deb.debian.org/debian trixie/main i386 man-db i386 2.13.0-1 [1428 kB] Get: 34 http://deb.debian.org/debian trixie/main i386 m4 i386 1.4.19-4 [293 kB] Get: 35 http://deb.debian.org/debian trixie/main i386 autoconf all 2.72-3 [493 kB] Get: 36 http://deb.debian.org/debian trixie/main i386 autotools-dev all 20220109.1 [51.6 kB] Get: 37 http://deb.debian.org/debian trixie/main i386 automake all 1:1.16.5-1.3 [823 kB] Get: 38 http://deb.debian.org/debian trixie/main i386 autopoint all 0.22.5-2 [723 kB] Get: 39 http://deb.debian.org/debian trixie/main i386 libdebhelper-perl all 13.20 [89.7 kB] Get: 40 http://deb.debian.org/debian trixie/main i386 libtool all 2.4.7-8 [517 kB] Get: 41 http://deb.debian.org/debian trixie/main i386 dh-autoreconf all 20 [17.1 kB] Get: 42 http://deb.debian.org/debian trixie/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 43 http://deb.debian.org/debian trixie/main i386 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 44 http://deb.debian.org/debian trixie/main i386 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 45 http://deb.debian.org/debian trixie/main i386 libelf1t64 i386 0.192-4 [195 kB] Get: 46 http://deb.debian.org/debian trixie/main i386 dwz i386 0.15-1+b1 [116 kB] Get: 47 http://deb.debian.org/debian trixie/main i386 libicu72 i386 72.1-5+b1 [9583 kB] Get: 48 http://deb.debian.org/debian trixie/main i386 libxml2 i386 2.12.7+dfsg+really2.9.14-0.2+b1 [734 kB] Get: 49 http://deb.debian.org/debian trixie/main i386 gettext i386 0.22.5-2 [1631 kB] Get: 50 http://deb.debian.org/debian trixie/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 51 http://deb.debian.org/debian trixie/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 52 http://deb.debian.org/debian trixie/main i386 debhelper all 13.20 [915 kB] Get: 53 http://deb.debian.org/debian trixie/main i386 python3-autocommand all 2.2.2-3 [13.6 kB] Get: 54 http://deb.debian.org/debian trixie/main i386 python3-more-itertools all 10.5.0-1 [63.8 kB] Get: 55 http://deb.debian.org/debian trixie/main i386 python3-typing-extensions all 4.12.2-2 [73.0 kB] Get: 56 http://deb.debian.org/debian trixie/main i386 python3-typeguard all 4.4.1-1 [37.0 kB] Get: 57 http://deb.debian.org/debian trixie/main i386 python3-inflect all 7.3.1-2 [32.4 kB] Get: 58 http://deb.debian.org/debian trixie/main i386 python3-jaraco.context all 6.0.0-1 [7984 B] Get: 59 http://deb.debian.org/debian trixie/main i386 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 60 http://deb.debian.org/debian trixie/main i386 python3-pkg-resources all 74.1.2-2 [213 kB] Get: 61 http://deb.debian.org/debian trixie/main i386 python3-zipp all 3.21.0-1 [10.6 kB] Get: 62 http://deb.debian.org/debian trixie/main i386 python3-setuptools all 74.1.2-2 [736 kB] Get: 63 http://deb.debian.org/debian trixie/main i386 dh-python all 6.20241024 [109 kB] Get: 64 http://deb.debian.org/debian trixie/main i386 fonts-dejavu-mono all 2.37-8 [489 kB] Get: 65 http://deb.debian.org/debian trixie/main i386 fonts-dejavu-core all 2.37-8 [840 kB] Get: 66 http://deb.debian.org/debian trixie/main i386 fontconfig-config i386 2.15.0-1.1+b1 [318 kB] Get: 67 http://deb.debian.org/debian trixie/main i386 help2man i386 1.49.3 [198 kB] Get: 68 http://deb.debian.org/debian trixie/main i386 libblas3 i386 3.12.0-4 [143 kB] Get: 69 http://deb.debian.org/debian trixie/main i386 libbrotli1 i386 1.1.0-2+b6 [308 kB] Get: 70 http://deb.debian.org/debian trixie/main i386 libpng16-16t64 i386 1.6.44-2 [288 kB] Get: 71 http://deb.debian.org/debian trixie/main i386 libfreetype6 i386 2.13.3+dfsg-1 [464 kB] Get: 72 http://deb.debian.org/debian trixie/main i386 libfontconfig1 i386 2.15.0-1.1+b1 [402 kB] Get: 73 http://deb.debian.org/debian trixie/main i386 libpixman-1-0 i386 0.44.0-3 [246 kB] Get: 74 http://deb.debian.org/debian trixie/main i386 libxau6 i386 1:1.0.11-1 [20.7 kB] Get: 75 http://deb.debian.org/debian trixie/main i386 libxdmcp6 i386 1:1.1.5-1 [28.2 kB] Get: 76 http://deb.debian.org/debian trixie/main i386 libxcb1 i386 1.17.0-2+b1 [148 kB] Get: 77 http://deb.debian.org/debian trixie/main i386 libx11-data all 2:1.8.10-2 [337 kB] Get: 78 http://deb.debian.org/debian trixie/main i386 libx11-6 i386 2:1.8.10-2 [834 kB] Get: 79 http://deb.debian.org/debian trixie/main i386 libxcb-render0 i386 1.17.0-2+b1 [116 kB] Get: 80 http://deb.debian.org/debian trixie/main i386 libxcb-shm0 i386 1.17.0-2+b1 [105 kB] Get: 81 http://deb.debian.org/debian trixie/main i386 libxext6 i386 2:1.3.4-1+b2 [52.6 kB] Get: 82 http://deb.debian.org/debian trixie/main i386 libxrender1 i386 1:0.9.10-1.1+b2 [28.9 kB] Get: 83 http://deb.debian.org/debian trixie/main i386 libcairo2 i386 1.18.2-2 [591 kB] Get: 84 http://deb.debian.org/debian trixie/main i386 libgfortran5 i386 14.2.0-8 [735 kB] Get: 85 http://deb.debian.org/debian trixie/main i386 libinchi1.07 i386 1.07.1+dfsg-5 [555 kB] Get: 86 http://deb.debian.org/debian trixie/main i386 liblapack3 i386 3.12.0-4 [2194 kB] Get: 87 http://deb.debian.org/debian trixie/main i386 libmaeparser1 i386 1.3.1-1+b2 [99.3 kB] Get: 88 http://deb.debian.org/debian trixie/main i386 libopenbabel7 i386 3.1.1+dfsg-11+b1 [3372 kB] Get: 89 http://deb.debian.org/debian trixie/main i386 libpython3.12t64 i386 3.12.7-3 [2170 kB] Get: 90 http://deb.debian.org/debian trixie/main i386 libxslt1.1 i386 1.1.35-1.1+b1 [243 kB] Get: 91 http://deb.debian.org/debian trixie/main i386 python3-all i386 3.12.6-1 [1040 B] Get: 92 http://deb.debian.org/debian trixie/main i386 python3-lxml i386 5.3.0-1+b1 [1586 kB] Get: 93 http://deb.debian.org/debian trixie/main i386 python3-numpy i386 1:1.26.4+ds-12 [4752 kB] Get: 94 http://deb.debian.org/debian trixie/main i386 python3-openbabel i386 3.1.1+dfsg-11+b1 [577 kB] Fetched 50.9 MB in 1s (56.2 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package liblocale-gettext-perl. 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Preparing to unpack .../68-python3-all_3.12.6-1_i386.deb ... Unpacking python3-all (3.12.6-1) ... Selecting previously unselected package python3-lxml:i386. Preparing to unpack .../69-python3-lxml_5.3.0-1+b1_i386.deb ... Unpacking python3-lxml:i386 (5.3.0-1+b1) ... Selecting previously unselected package python3-numpy. Preparing to unpack .../70-python3-numpy_1%3a1.26.4+ds-12_i386.deb ... Unpacking python3-numpy (1:1.26.4+ds-12) ... Selecting previously unselected package python3-openbabel. Preparing to unpack .../71-python3-openbabel_3.1.1+dfsg-11+b1_i386.deb ... Unpacking python3-openbabel (3.1.1+dfsg-11+b1) ... Setting up media-types (10.1.0) ... Setting up libpipeline1:i386 (1.5.8-1) ... Setting up libpixman-1-0:i386 (0.44.0-3) ... Setting up libxau6:i386 (1:1.0.11-1) ... Setting up libxdmcp6:i386 (1:1.1.5-1) ... Setting up libkeyutils1:i386 (1.6.3-4) ... Setting up libxcb1:i386 (1.17.0-2+b1) ... Setting up libicu72:i386 (72.1-5+b1) ... Setting up bsdextrautils (2.40.2-11) ... Setting up libmagic-mgc (1:5.45-3+b1) ... Setting up libxcb-render0:i386 (1.17.0-2+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libtirpc-common (1.3.4+ds-1.3) ... Setting up libdebhelper-perl (13.20) ... Setting up libbrotli1:i386 (1.1.0-2+b6) ... Setting up libmagic1t64:i386 (1:5.45-3+b1) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up libxcb-shm0:i386 (1.17.0-2+b1) ... Setting up libcom-err2:i386 (1.47.1-1+b1) ... Setting up file (1:5.45-3+b1) ... Setting up libelf1t64:i386 (0.192-4) ... Setting up libkrb5support0:i386 (1.21.3-3) ... Setting up libmaeparser1:i386 (1.3.1-1+b2) ... Setting up tzdata (2024b-3) ... Current default time zone: 'Etc/UTC' Local time is now: Wed Dec 4 20:31:27 UTC 2024. Universal Time is now: Wed Dec 4 20:31:27 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20220109.1) ... Setting up libblas3:i386 (3.12.0-4) ... update-alternatives: using /usr/lib/i386-linux-gnu/blas/libblas.so.3 to provide /usr/lib/i386-linux-gnu/libblas.so.3 (libblas.so.3-i386-linux-gnu) in auto mode Setting up libx11-data (2:1.8.10-2) ... Setting up fonts-dejavu-mono (2.37-8) ... Setting up libpng16-16t64:i386 (1.6.44-2) ... Setting up autopoint (0.22.5-2) ... Setting up fonts-dejavu-core (2.37-8) ... Setting up libk5crypto3:i386 (1.21.3-3) ... Setting up libgfortran5:i386 (14.2.0-8) ... Setting up autoconf (2.72-3) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:i386 (0.0.8-1+b2) ... Setting up libx11-6:i386 (2:1.8.10-2) ... Setting up netbase (6.4) ... Setting up libkrb5-3:i386 (1.21.3-3) ... Setting up libinchi1.07 (1.07.1+dfsg-5) ... Setting up readline-common (8.2-5) ... Setting up libxml2:i386 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up liblocale-gettext-perl (1.07-7+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up liblapack3:i386 (3.12.0-4) ... update-alternatives: using /usr/lib/i386-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/i386-linux-gnu/liblapack.so.3 (liblapack.so.3-i386-linux-gnu) in auto mode Setting up gettext (0.22.5-2) ... Setting up libxrender1:i386 (1:0.9.10-1.1+b2) ... Setting up libtool (2.4.7-8) ... Setting up fontconfig-config (2.15.0-1.1+b1) ... Setting up libxext6:i386 (2:1.3.4-1+b2) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up help2man (1.49.3) ... Setting up dh-autoreconf (20) ... Setting up libfreetype6:i386 (2.13.3+dfsg-1) ... Setting up libgssapi-krb5-2:i386 (1.21.3-3) ... Setting up libreadline8t64:i386 (8.2-5) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-5) ... Setting up libxslt1.1:i386 (1.1.35-1.1+b1) ... Setting up libfontconfig1:i386 (2.15.0-1.1+b1) ... Setting up libtirpc3t64:i386 (1.3.4+ds-1.3+b1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libcairo2:i386 (1.18.2-2) ... Setting up libnsl2:i386 (1.3.0-3+b3) ... Setting up libpython3.12-stdlib:i386 (3.12.7-3) ... Setting up python3.12 (3.12.7-3) ... Setting up libopenbabel7 (3.1.1+dfsg-11+b1) ... Setting up debhelper (13.20) ... Setting up libpython3.12t64:i386 (3.12.7-3) ... Setting up libpython3-stdlib:i386 (3.12.6-1) ... Setting up python3 (3.12.6-1) ... Setting up python3-zipp (3.21.0-1) ... Setting up python3-autocommand (2.2.2-3) ... Setting up python3-typing-extensions (4.12.2-2) ... Setting up python3-lxml:i386 (5.3.0-1+b1) ... Setting up python3-more-itertools (10.5.0-1) ... Setting up python3-jaraco.functools (4.1.0-1) ... Setting up python3-openbabel (3.1.1+dfsg-11+b1) ... Setting up python3-jaraco.context (6.0.0-1) ... Setting up python3-typeguard (4.4.1-1) ... Setting up python3-all (3.12.6-1) ... Setting up python3-inflect (7.3.1-2) ... Setting up python3-pkg-resources (74.1.2-2) ... Setting up python3-setuptools (74.1.2-2) ... Setting up python3-numpy (1:1.26.4+ds-12) ... Setting up dh-python (6.20241024) ... Processing triggers for libc-bin (2.40-3) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/plip-2.3.0+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../plip_2.3.0+dfsg-2_source.changes dpkg-buildpackage: info: source package plip dpkg-buildpackage: info: source version 2.3.0+dfsg-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild pybuild --clean -i python{version} -p 3.12 I: pybuild base:311: python3.12 setup.py clean /usr/lib/python3/dist-packages/setuptools/dist.py:452: SetuptoolsDeprecationWarning: Invalid dash-separated options !! ******************************************************************************** Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead. This deprecation is overdue, please update your project and remove deprecated calls to avoid build errors in the future. See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. ******************************************************************************** !! opt = self.warn_dash_deprecation(opt, section) running clean removing '/build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build' (and everything under it) 'build/bdist.linux-i686' does not exist -- can't clean it 'build/scripts-3.12' does not exist -- can't clean it rm -rf .pybuild/ find . -name \*.pyc -exec rm {} \; dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/plip.substvars debian/files rm -fr -- debian/plip/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \) debian/rules binary dh binary --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild pybuild --configure -i python{version} -p 3.12 I: pybuild base:311: python3.12 setup.py config /usr/lib/python3/dist-packages/setuptools/dist.py:452: SetuptoolsDeprecationWarning: Invalid dash-separated options !! ******************************************************************************** Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead. This deprecation is overdue, please update your project and remove deprecated calls to avoid build errors in the future. See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. ******************************************************************************** !! opt = self.warn_dash_deprecation(opt, section) running config dh_auto_build -O--buildsystem=pybuild pybuild --build -i python{version} -p 3.12 I: pybuild base:311: /usr/bin/python3 setup.py build /usr/lib/python3/dist-packages/setuptools/dist.py:452: SetuptoolsDeprecationWarning: Invalid dash-separated options !! ******************************************************************************** Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead. This deprecation is overdue, please update your project and remove deprecated calls to avoid build errors in the future. See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. ******************************************************************************** !! opt = self.warn_dash_deprecation(opt, section) running build running build_py creating /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip copying plip/__init__.py -> /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip copying plip/plipcmd.py -> /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip creating /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/exchange copying plip/exchange/webservices.py -> /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/exchange copying plip/exchange/xml.py -> /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/exchange copying plip/exchange/__init__.py -> /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/exchange copying plip/exchange/report.py -> /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/exchange copying plip/exchange/json.py -> /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/exchange creating /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/structure copying plip/structure/preparation.py -> /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/structure copying plip/structure/__init__.py -> /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/structure copying plip/structure/detection.py -> /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/structure creating /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/test copying plip/test/test_literature_validated.py -> /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/test copying plip/test/test_hydrogen_bonds.py -> /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/test copying plip/test/test_metal_coordination.py -> /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/test copying plip/test/test_xml_writer.py -> /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/test copying plip/test/test_command_line.py -> /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/test copying plip/test/test_water_bridges.py -> /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/test copying plip/test/test_structure_processing.py -> /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/test copying plip/test/__init__.py -> /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/test copying plip/test/test_pi_stacking.py -> /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/test copying plip/test/test_xml_parser.py -> /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/test copying plip/test/test_visualization.py -> /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/test copying plip/test/test_basic_functions.py -> /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/test copying plip/test/test_intra.py -> /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/test copying plip/test/test_salt_bridges.py -> /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/test copying plip/test/test_remote_services.py -> /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/test creating /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/basic copying plip/basic/config.py -> /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/basic copying plip/basic/parallel.py -> /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/basic copying plip/basic/supplemental.py -> /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/basic copying plip/basic/__init__.py -> /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/basic copying plip/basic/logger.py -> /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/basic copying plip/basic/remote.py -> /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/basic creating /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/visualization copying plip/visualization/pymol.py -> /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/visualization copying plip/visualization/chimera.py -> /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/visualization copying plip/visualization/__init__.py -> /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/visualization copying plip/visualization/visualize.py -> /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/visualization running build_scripts creating build creating build/scripts-3.12 copying and adjusting plip/plipcmd.py -> build/scripts-3.12 changing mode of build/scripts-3.12/plipcmd.py from 644 to 755 debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/plip-2.3.0+dfsg' # skip all other tests since they require exluded pdb files export PYTHONPATH=/build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/; \ debian/tests/xml-parser make[1]: Leaving directory '/build/reproducible-path/plip-2.3.0+dfsg' create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild rm -f -- debian/plip.substvars rm -fr -- debian/.debhelper/generated/plip/ debian/plip/ debian/tmp/ debian/rules override_dh_auto_install make[1]: Entering directory '/build/reproducible-path/plip-2.3.0+dfsg' dh_auto_install install -m0755 -d /build/reproducible-path/plip-2.3.0\+dfsg/debian/plip pybuild --install -i python{version} -p 3.12 --dest-dir /build/reproducible-path/plip-2.3.0\+dfsg/debian/plip I: pybuild base:311: /usr/bin/python3 setup.py install --root /build/reproducible-path/plip-2.3.0+dfsg/debian/plip /usr/lib/python3/dist-packages/setuptools/dist.py:452: SetuptoolsDeprecationWarning: Invalid dash-separated options !! ******************************************************************************** Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead. This deprecation is overdue, please update your project and remove deprecated calls to avoid build errors in the future. See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. ******************************************************************************** !! opt = self.warn_dash_deprecation(opt, section) running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running build running build_py running build_scripts running install_lib creating /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr creating /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib creating /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12 creating /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages creating /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip creating /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/exchange copying /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/exchange/webservices.py -> /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/exchange copying /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/exchange/xml.py -> /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/exchange copying /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/exchange/__init__.py -> /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/exchange copying /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/exchange/report.py -> /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/exchange creating /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/exchange/__pycache__ copying /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/exchange/__pycache__/xml.cpython-312.pyc -> /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/exchange/__pycache__ copying /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/exchange/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/exchange/__pycache__ copying /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/exchange/json.py -> /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/exchange creating /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/structure copying /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/structure/preparation.py -> /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/structure copying /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/structure/__init__.py -> /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/structure copying /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/structure/detection.py -> /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/structure creating /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/test copying /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/test/test_literature_validated.py -> /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/test copying /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/test/test_hydrogen_bonds.py -> /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/test copying /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/test/test_metal_coordination.py -> /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/test copying /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/test/test_xml_writer.py -> /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/test copying /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/test/test_command_line.py -> /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/test copying /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/test/test_water_bridges.py -> /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/test copying /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/test/test_structure_processing.py -> /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/test copying /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/test/__init__.py -> /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/test copying /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/test/test_pi_stacking.py -> /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/test copying /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/test/test_xml_parser.py -> /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/test copying /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/test/test_visualization.py -> /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/test copying /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/test/test_basic_functions.py -> /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/test copying /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/test/test_intra.py -> /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/test copying /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/test/test_salt_bridges.py -> /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/test copying /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/test/test_remote_services.py -> /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/test creating /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/basic copying /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/basic/config.py -> /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/basic copying /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/basic/parallel.py -> /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/basic copying /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/basic/supplemental.py -> /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/basic copying /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/basic/__init__.py -> /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/basic copying /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/basic/logger.py -> /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/basic copying /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/basic/remote.py -> /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/basic copying /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/__init__.py -> /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip copying /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/plipcmd.py -> /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip creating /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/__pycache__ copying /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/__pycache__ creating /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/visualization copying /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/visualization/pymol.py -> /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/visualization copying /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/visualization/chimera.py -> /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/visualization copying /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/visualization/__init__.py -> /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/visualization copying /build/reproducible-path/plip-2.3.0+dfsg/.pybuild/cpython3_3.12_plip/build/plip/visualization/visualize.py -> /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/visualization byte-compiling /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/exchange/webservices.py to webservices.cpython-312.pyc byte-compiling /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/exchange/xml.py to xml.cpython-312.pyc byte-compiling /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/exchange/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/exchange/report.py to report.cpython-312.pyc byte-compiling /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/exchange/json.py to json.cpython-312.pyc byte-compiling /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/structure/preparation.py to preparation.cpython-312.pyc byte-compiling /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/structure/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/structure/detection.py to detection.cpython-312.pyc byte-compiling /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/test/test_literature_validated.py to test_literature_validated.cpython-312.pyc byte-compiling /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/test/test_hydrogen_bonds.py to test_hydrogen_bonds.cpython-312.pyc byte-compiling /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/test/test_metal_coordination.py to test_metal_coordination.cpython-312.pyc byte-compiling /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/test/test_xml_writer.py to test_xml_writer.cpython-312.pyc byte-compiling /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/test/test_command_line.py to test_command_line.cpython-312.pyc byte-compiling /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/test/test_water_bridges.py to test_water_bridges.cpython-312.pyc byte-compiling /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/test/test_structure_processing.py to test_structure_processing.cpython-312.pyc byte-compiling /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/test/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/test/test_pi_stacking.py to test_pi_stacking.cpython-312.pyc byte-compiling /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/test/test_xml_parser.py to test_xml_parser.cpython-312.pyc byte-compiling /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/test/test_visualization.py to test_visualization.cpython-312.pyc byte-compiling /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/test/test_basic_functions.py to test_basic_functions.cpython-312.pyc byte-compiling /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/test/test_intra.py to test_intra.cpython-312.pyc byte-compiling /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/test/test_salt_bridges.py to test_salt_bridges.cpython-312.pyc byte-compiling /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/test/test_remote_services.py to test_remote_services.cpython-312.pyc byte-compiling /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/basic/config.py to config.cpython-312.pyc byte-compiling /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/basic/parallel.py to parallel.cpython-312.pyc byte-compiling /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/basic/supplemental.py to supplemental.cpython-312.pyc byte-compiling /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/basic/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/basic/logger.py to logger.cpython-312.pyc byte-compiling /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/basic/remote.py to remote.cpython-312.pyc byte-compiling /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/plipcmd.py to plipcmd.cpython-312.pyc byte-compiling /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/visualization/pymol.py to pymol.cpython-312.pyc byte-compiling /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/visualization/chimera.py to chimera.cpython-312.pyc byte-compiling /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/visualization/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip/visualization/visualize.py to visualize.cpython-312.pyc running install_egg_info running egg_info creating plip.egg-info writing plip.egg-info/PKG-INFO writing dependency_links to plip.egg-info/dependency_links.txt writing entry points to plip.egg-info/entry_points.txt writing requirements to plip.egg-info/requires.txt writing top-level names to plip.egg-info/top_level.txt writing manifest file 'plip.egg-info/SOURCES.txt' reading manifest file 'plip.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.txt' writing manifest file 'plip.egg-info/SOURCES.txt' Copying plip.egg-info to /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/plip-2.3.0.egg-info Skipping SOURCES.txt running install_scripts creating /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/bin copying build/scripts-3.12/plipcmd.py -> /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/bin changing mode of /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/bin/plipcmd.py to 755 Installing plip script to /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/bin rm -rvf /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/bin/plip removed '/build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/bin/plip' mv /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/bin/plipcmd.py \ /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/bin/plipcmd mkdir -p /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/share/man/man1 export PYTHONPATH=/build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/lib/python3.12/dist-packages/:\ /build/reproducible-path/plip-2.3.0+dfsg/plip/modules; \ help2man --no-info --no-discard-stderr --version-string="2.3.0+dfsg-2" --name='Protein-Ligand Interaction Profiler (PLIP)' \ /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/bin/plipcmd > /build/reproducible-path/plip-2.3.0+dfsg/debian/plip/usr/share/man/man1/plipcmd.1 make[1]: Leaving directory '/build/reproducible-path/plip-2.3.0+dfsg' dh_installdocs -O--buildsystem=pybuild install -m0755 -d debian/plip/usr/share/doc/plip install -m0755 -d debian/plip/usr/share/doc/plip cp --reflink=auto -a ./DOCUMENTATION.md debian/plip/usr/share/doc/plip cp --reflink=auto -a ./README.md debian/plip/usr/share/doc/plip chmod -R u\+rw,go=rX debian/plip/usr/share/doc install -p -m0644 debian/copyright debian/plip/usr/share/doc/plip/copyright dh_installchangelogs -O--buildsystem=pybuild install -m0755 -d debian/plip/usr/share/doc/plip install -p -m0644 debian/.debhelper/generated/plip/dh_installchangelogs.dch.trimmed debian/plip/usr/share/doc/plip/changelog.Debian install -p -m0644 ./CHANGES.txt debian/plip/usr/share/doc/plip/changelog dh_installman -O--buildsystem=pybuild man-recode --to-code UTF-8 --suffix .dh-new debian/plip/usr/share/man/man1/plipcmd.1 mv debian/plip/usr/share/man/man1/plipcmd.1.dh-new debian/plip/usr/share/man/man1/plipcmd.1 chmod 0644 -- debian/plip/usr/share/man/man1/plipcmd.1 dh_python3 -O--buildsystem=pybuild D: dh_python3 dh_python3:180: version: 6.20241024 D: dh_python3 dh_python3:181: argv: ['/usr/bin/dh_python3', '-O--buildsystem=pybuild'] D: dh_python3 dh_python3:182: options: Namespace(guess_deps=True, skip_private=False, verbose=True, arch=None, package=None, no_package=None, remaining_packages=False, compile_all=False, vrange=None, regexpr=None, accept_upstream_versions=False, depends=None, depends_section=None, recommends=None, recommends_section=None, suggests=None, suggests_section=None, requires=None, shebang=None, ignore_shebangs=False, clean_dbg_pkg=True, no_ext_rename=False, no_shebang_rewrite=False, private_dir=None, O=['--buildsystem=pybuild']) D: dh_python3 dh_python3:183: supported Python versions: 3.12 (default=3.12) D: dh_python3 debhelper:174: source=plip, binary packages=['plip'] D: dh_python3 dh_python3:205: processing package plip... D: dh_python3 fs:50: moving files from debian/plip/usr/lib/python3.12/dist-packages to debian/plip/usr/lib/python3/dist-packages/ D: dh_python3 fs:338: package plip details = {'requires.txt': {'debian/plip/usr/lib/python3/dist-packages/plip-2.3.0.egg-info/requires.txt'}, 'egg-info': {'debian/plip/usr/lib/python3/dist-packages/plip-2.3.0.egg-info/PKG-INFO'}, 'dist-info': set(), 'nsp.txt': set(), 'shebangs': {/usr/bin/python3}, 'public_vers': {Version('3')}, 'private_dirs': {}, 'compile': True, 'ext_vers': set(), 'ext_no_version': set()} D: dh_python3 depends:103: generating dependencies for package plip D: dh_python3 pydist:175: trying to find dependency for lxml (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for numpy (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for openbabel (python=None) D: dh_python3 pydist:291: invoking dpkg -S *python3/*/[Oo][Pp][Ee][Nn][Bb][Aa][Bb][Ee][Ll]-?*.*-info D: dh_python3 pydist:313: dpkg -S did not find package for openbabel: dpkg-query: no path found matching pattern *python3/*/[Oo][Pp][Ee][Nn][Bb][Aa][Bb][Ee][Ll]-?*.*-info I: dh_python3 pydist:316: Cannot find package that provides openbabel. Please add package that provides it to Build-Depends or add "openbabel python3-openbabel" line to debian/py3dist-overrides or add proper dependency to Depends by hand and ignore this info. D: dh_python3 depends:253: D={'python3-lxml', 'python3:any', 'python3-numpy'}; R=[]; S=[]; E=[], B=[]; RT=[] dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild cd debian/plip chmod a-x usr/share/doc/plip/DOCUMENTATION.md usr/share/doc/plip/README.md usr/share/doc/plip/changelog usr/share/doc/plip/changelog.Debian usr/share/man/man1/plipcmd.1 gzip -9nf usr/share/doc/plip/DOCUMENTATION.md usr/share/doc/plip/README.md usr/share/doc/plip/changelog usr/share/doc/plip/changelog.Debian usr/share/man/man1/plipcmd.1 cd '/build/reproducible-path/plip-2.3.0+dfsg' dh_fixperms -O--buildsystem=pybuild find debian/plip ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/plip/usr/share/doc -type f -a -true -a ! -regex 'debian/plip/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/plip/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/plip/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/plip -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/plip/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x find debian/plip/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w dh_missing -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild install -m0755 -d debian/plip/DEBIAN printf '#!/bin/sh\nset -e\n' > debian/plip/DEBIAN/postinst cat debian/plip.postinst.debhelper >> debian/plip/DEBIAN/postinst chmod 0755 -- debian/plip/DEBIAN/postinst printf '#!/bin/sh\nset -e\n' > debian/plip/DEBIAN/prerm cat debian/plip.prerm.debhelper >> debian/plip/DEBIAN/prerm chmod 0755 -- debian/plip/DEBIAN/prerm dh_gencontrol -O--buildsystem=pybuild install -m0755 -d debian/plip/DEBIAN echo misc:Depends= >> debian/plip.substvars echo misc:Pre-Depends= >> debian/plip.substvars dpkg-gencontrol -pplip -ldebian/changelog -Tdebian/plip.substvars -cdebian/control -Pdebian/plip chmod 0644 -- debian/plip/DEBIAN/control dh_md5sums -O--buildsystem=pybuild install -m0755 -d debian/plip/DEBIAN cd debian/plip >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/plip/DEBIAN/md5sums dh_builddeb -O--buildsystem=pybuild dpkg-deb --root-owner-group --build debian/plip .. dpkg-deb: building package 'plip' in '../plip_2.3.0+dfsg-2_all.deb'. dpkg-genbuildinfo --build=binary -O../plip_2.3.0+dfsg-2_i386.buildinfo dpkg-genchanges --build=binary -O../plip_2.3.0+dfsg-2_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/49409 and its subdirectories I: Current time: Wed Dec 4 08:31:53 -12 2024 I: pbuilder-time-stamp: 1733344313 Wed Dec 4 20:31:54 UTC 2024 I: 1st build successful. Starting 2nd build on remote node ionos16-i386.debian.net. Wed Dec 4 20:31:54 UTC 2024 I: Preparing to do remote build '2' on ionos16-i386.debian.net. Wed Dec 4 20:32:34 UTC 2024 I: Deleting $TMPDIR on ionos16-i386.debian.net. Wed Dec 4 20:32:35 UTC 2024 I: plip_2.3.0+dfsg-2_i386.changes: Format: 1.8 Date: Thu, 04 Jan 2024 12:49:59 +0100 Source: plip Binary: plip Architecture: all Version: 2.3.0+dfsg-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: plip - fully automated protein-ligand interaction profiler Closes: 1059946 Changes: plip (2.3.0+dfsg-2) unstable; urgency=medium . * Team upload. * Drop python-future from Build-Depends Closes: #1059946 * Build-Depends: s/dh-python/dh-sequence-python3/ (routine-update) Checksums-Sha1: d2bfa755c0128e464b3b540641b522adb33fe9fd 83700 plip_2.3.0+dfsg-2_all.deb db7bfa16b361511273852c818f0d2f45596e4f6e 6844 plip_2.3.0+dfsg-2_i386.buildinfo Checksums-Sha256: 1e9365420fdcc0e34cf91f06c780a1f92585db5fcf17c6ea2b400c9812ed0abb 83700 plip_2.3.0+dfsg-2_all.deb c1e980a8a70502585e21f9a846139d5061a8b9137e36f1aa5c92f641374c3445 6844 plip_2.3.0+dfsg-2_i386.buildinfo Files: 4746b3631ab4a662d1a97646dce3d7a4 83700 python optional plip_2.3.0+dfsg-2_all.deb e6533700c7e59b0de9f872d65efb90cf 6844 python optional plip_2.3.0+dfsg-2_i386.buildinfo Wed Dec 4 20:32:36 UTC 2024 I: diffoscope 283 will be used to compare the two builds: Running as unit: rb-diffoscope-i386_7-50456.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.jhhv0Osx/plip_2.3.0+dfsg-2.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.jhhv0Osx/plip_2.3.0+dfsg-2.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.jhhv0Osx/plip_2.3.0+dfsg-2.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.jhhv0Osx/b1/plip_2.3.0+dfsg-2_i386.changes /srv/reproducible-results/rbuild-debian/r-b-build.jhhv0Osx/b2/plip_2.3.0+dfsg-2_i386.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.368s) 0.368s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.016s) 0.016s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 728ms CPU time consumed: 701ms Wed Dec 4 20:32:37 UTC 2024 I: diffoscope 283 found no differences in the changes files, and a .buildinfo file also exists. Wed Dec 4 20:32:37 UTC 2024 I: plip from trixie built successfully and reproducibly on i386. Wed Dec 4 20:32:38 UTC 2024 I: Submitting .buildinfo files to external archives: Wed Dec 4 20:32:38 UTC 2024 I: Submitting 8.0K b1/plip_2.3.0+dfsg-2_i386.buildinfo.asc Wed Dec 4 20:32:39 UTC 2024 I: Submitting 8.0K b2/plip_2.3.0+dfsg-2_i386.buildinfo.asc Wed Dec 4 20:32:40 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Wed Dec 4 20:32:40 UTC 2024 I: Done submitting .buildinfo files. Wed Dec 4 20:32:40 UTC 2024 I: Removing signed plip_2.3.0+dfsg-2_i386.buildinfo.asc files: removed './b1/plip_2.3.0+dfsg-2_i386.buildinfo.asc' removed './b2/plip_2.3.0+dfsg-2_i386.buildinfo.asc'